Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060557.t1 | XP_003609202.1 | 97.3 | 410 | 11 | 0 | 1 | 410 | 1 | 410 | 9.40E-219 | 769.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060557.t1 | Q1EBV7 | 76.7 | 417 | 82 | 5 | 1 | 410 | 1 | 409 | 1.3e-168 | 594.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060557.t1 | G7JU57 | 97.3 | 410 | 11 | 0 | 1 | 410 | 1 | 410 | 6.8e-219 | 769.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055971 | MS.gene060557 | 0.836248 | 1.05E-56 | -1.69E-46 |
| MS.gene056796 | MS.gene060557 | 0.81541 | 9.38E-52 | -1.69E-46 |
| MS.gene060557 | MS.gene070756 | 0.813257 | 2.81E-51 | -1.69E-46 |
| MS.gene060557 | MS.gene30690 | 0.806077 | 9.80E-50 | -1.69E-46 |
| MS.gene060557 | MS.gene46923 | 0.986876 | 2.81E-168 | -1.69E-46 |
| MS.gene060557 | MS.gene52686 | 0.80673 | 7.14E-50 | -1.69E-46 |
| MS.gene060557 | MS.gene55488 | 0.817362 | 3.43E-52 | -1.69E-46 |
| MS.gene060557 | MS.gene57167 | 0.819446 | 1.16E-52 | -1.69E-46 |
| MS.gene060557 | MS.gene75136 | 0.813408 | 2.60E-51 | -1.69E-46 |
| MS.gene060557 | MS.gene84825 | 0.809638 | 1.71E-50 | -1.69E-46 |
| MS.gene060557 | MS.gene90871 | 0.818186 | 2.24E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015491 | MS.gene060557 | PPI |
| MS.gene015492 | MS.gene060557 | PPI |
| MS.gene20372 | MS.gene060557 | PPI |
| MS.gene025758 | MS.gene060557 | PPI |
| MS.gene20373 | MS.gene060557 | PPI |
| MS.gene22571 | MS.gene060557 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060557.t1 | MTR_4g113090 | 97.317 | 410 | 11 | 0 | 1 | 410 | 1 | 410 | 0.0 | 808 |
| MS.gene060557.t1 | MTR_2g073190 | 44.985 | 329 | 179 | 2 | 79 | 406 | 354 | 681 | 1.25e-82 | 266 |
| MS.gene060557.t1 | MTR_2g073070 | 48.729 | 236 | 119 | 2 | 172 | 406 | 6 | 240 | 7.85e-66 | 210 |
| MS.gene060557.t1 | MTR_7g053090 | 41.333 | 300 | 171 | 3 | 100 | 395 | 94 | 392 | 1.86e-64 | 212 |
| MS.gene060557.t1 | MTR_5g011440 | 34.551 | 356 | 214 | 6 | 62 | 398 | 68 | 423 | 2.38e-55 | 189 |
| MS.gene060557.t1 | MTR_5g011440 | 34.551 | 356 | 214 | 6 | 62 | 398 | 61 | 416 | 2.48e-55 | 189 |
| MS.gene060557.t1 | MTR_5g011440 | 34.808 | 339 | 202 | 6 | 62 | 381 | 68 | 406 | 2.09e-52 | 180 |
| MS.gene060557.t1 | MTR_5g011450 | 32.143 | 308 | 198 | 4 | 97 | 393 | 10 | 317 | 1.33e-48 | 168 |
| MS.gene060557.t1 | MTR_2g073080 | 36.719 | 128 | 69 | 5 | 46 | 170 | 44 | 162 | 1.71e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060557.t1 | AT2G26900 | 76.739 | 417 | 82 | 5 | 1 | 410 | 1 | 409 | 0.0 | 603 |
| MS.gene060557.t1 | AT1G78560 | 47.305 | 334 | 169 | 5 | 75 | 404 | 71 | 401 | 2.15e-90 | 279 |
| MS.gene060557.t1 | AT3G25410 | 37.968 | 374 | 209 | 8 | 30 | 397 | 53 | 409 | 5.44e-65 | 214 |
| MS.gene060557.t1 | AT4G12030 | 36.478 | 318 | 188 | 6 | 94 | 397 | 87 | 404 | 5.98e-58 | 195 |
| MS.gene060557.t1 | AT4G22840 | 36.184 | 304 | 183 | 4 | 103 | 395 | 98 | 401 | 1.79e-57 | 194 |
| MS.gene060557.t1 | AT4G12030 | 36.741 | 313 | 184 | 6 | 99 | 397 | 1 | 313 | 4.00e-57 | 190 |
| MS.gene060557.t1 | AT4G12030 | 37.407 | 270 | 158 | 5 | 139 | 397 | 1 | 270 | 1.89e-49 | 169 |
| MS.gene060557.t1 | AT4G12030 | 37.407 | 270 | 158 | 5 | 139 | 397 | 1 | 270 | 1.89e-49 | 169 |
| MS.gene060557.t1 | AT4G12030 | 37.407 | 270 | 158 | 5 | 139 | 397 | 1 | 270 | 1.89e-49 | 169 |
Find 99 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCATTTGCTATTGGTTAT+TGG | 0.150047 | 8.2:+15383109 | MS.gene060557:CDS |
| TGATGACAAAGACGACTTTA+AGG | 0.192231 | 8.2:+15383907 | MS.gene060557:CDS |
| GGGTTTCCTCATGCTGTCTA+TGG | 0.198961 | 8.2:+15380773 | MS.gene060557:CDS |
| TCTTGCAACTGGTCTTATTT+TGG | 0.200101 | 8.2:+15381510 | MS.gene060557:CDS |
| CGAGGTGGATAGGTATAATT+TGG | 0.253688 | 8.2:-15378864 | None:intergenic |
| CATGCTGCTGCATTTGCTAT+TGG | 0.299073 | 8.2:+15383102 | MS.gene060557:CDS |
| ACATACCGAAATGATTATTA+AGG | 0.327038 | 8.2:-15378896 | None:intergenic |
| TTCTACAGGTGTTCAACTAT+TGG | 0.338192 | 8.2:+15382257 | MS.gene060557:intron |
| TTGTATGCGCAGGTCATCTT+GGG | 0.340243 | 8.2:+15380590 | MS.gene060557:intron |
| TGCATTTAGAAGTGAGTTGC+AGG | 0.346099 | 8.2:+15379045 | MS.gene060557:CDS |
| TCTTTGTCATCAACGGGAAT+TGG | 0.350500 | 8.2:-15383896 | None:intergenic |
| TTCTCAGACACTAAAACTTT+CGG | 0.356448 | 8.2:+15381483 | MS.gene060557:intron |
| AATATCCTTAATAATCATTT+CGG | 0.364566 | 8.2:+15378891 | MS.gene060557:CDS |
| TAGTCCATCTAGCGTCAAAA+AGG | 0.368389 | 8.2:+15379107 | MS.gene060557:CDS |
| GACCTATTTACTCTTGGCTT+GGG | 0.369788 | 8.2:+15380753 | MS.gene060557:CDS |
| CTTGTATGCGCAGGTCATCT+TGG | 0.374061 | 8.2:+15380589 | MS.gene060557:intron |
| ATCTTACCTCCCACAATTGT+AGG | 0.403675 | 8.2:-15382655 | None:intergenic |
| GATTATCTTTGAAGTGAACT+TGG | 0.415890 | 8.2:-15382838 | None:intergenic |
| AAGTCGTCTTTGTCATCAAC+GGG | 0.418041 | 8.2:-15383902 | None:intergenic |
| AACCCAAGCCAAGAGTAAAT+AGG | 0.419662 | 8.2:-15380755 | None:intergenic |
| TTAGCACCAGTAGCAACAAT+TGG | 0.423758 | 8.2:-15379076 | None:intergenic |
| GGTTTCCTCATGCTGTCTAT+GGG | 0.424749 | 8.2:+15380774 | MS.gene060557:CDS |
| CTCGTGTTGTCCTGGAGGTC+AGG | 0.424832 | 8.2:+15381534 | MS.gene060557:CDS |
| TGGATGTCAAGAATATCATT+TGG | 0.431918 | 8.2:+15383129 | MS.gene060557:CDS |
| GGAGTGCTCTAGCTGTGTAT+TGG | 0.435900 | 8.2:+15383864 | MS.gene060557:CDS |
| GAACTTACAGCAGCATCAAC+AGG | 0.438663 | 8.2:-15382332 | None:intergenic |
| CTTTCGGCTCCTCTTGCAAC+TGG | 0.440648 | 8.2:+15381499 | MS.gene060557:CDS |
| TCAGCTTCAACAAACATATC+TGG | 0.448870 | 8.2:+15380405 | MS.gene060557:CDS |
| ATCTATCGAGTGTGGGATGC+AGG | 0.454978 | 8.2:+15383173 | MS.gene060557:CDS |
| CCAGTAGCAACAATTGGATT+AGG | 0.455683 | 8.2:-15379070 | None:intergenic |
| TTTATTTCAGGTAACTTGGT+TGG | 0.456017 | 8.2:+15380725 | MS.gene060557:intron |
| AAGACAGTTCTTACAGCAGC+TGG | 0.466585 | 8.2:-15380635 | None:intergenic |
| CCTAATCCAATTGTTGCTAC+TGG | 0.467233 | 8.2:+15379070 | MS.gene060557:CDS |
| AACTCTGGGCATGGAAGCCA+TGG | 0.467872 | 8.2:-15378814 | None:intergenic |
| ACATTTGATGCCTGACCTCC+AGG | 0.471096 | 8.2:-15381544 | None:intergenic |
| GGTATAATTTGGCTTAAGAA+TGG | 0.471739 | 8.2:-15378853 | None:intergenic |
| GAGACAGACCTATTTACTCT+TGG | 0.473070 | 8.2:+15380747 | MS.gene060557:CDS |
| GAGATGTTCCTGAAAGTGCT+GGG | 0.473507 | 8.2:+15380427 | MS.gene060557:CDS |
| TGCTGTCAGTGTTGTCTGCA+TGG | 0.473678 | 8.2:+15383717 | MS.gene060557:CDS |
| TGACTTTATTTCAGGTAACT+TGG | 0.475397 | 8.2:+15380721 | MS.gene060557:intron |
| GGAGATGTTCCTGAAAGTGC+TGG | 0.475562 | 8.2:+15380426 | MS.gene060557:CDS |
| AGCCTTAGACTTACCCAAAC+GGG | 0.475608 | 8.2:-15380498 | None:intergenic |
| AGACCTATTTACTCTTGGCT+TGG | 0.477469 | 8.2:+15380752 | MS.gene060557:CDS |
| ATCACGGTCACACCTTTGAT+AGG | 0.479069 | 8.2:+15382858 | MS.gene060557:CDS |
| ATGGTCTCTGAAAATAACTC+TGG | 0.487045 | 8.2:-15378829 | None:intergenic |
| AGAGAGAGCAACGTTTCCCT+TGG | 0.489152 | 8.2:-15381581 | None:intergenic |
| TGTTTGCAGAGCTCTGCACT+TGG | 0.497307 | 8.2:+15383643 | MS.gene060557:intron |
| GTGCTCTAGCTGTGTATTGG+AGG | 0.507859 | 8.2:+15383867 | MS.gene060557:CDS |
| ATTATCTTTGAAGTGAACTT+GGG | 0.524375 | 8.2:-15382837 | None:intergenic |
| CTCCTAACGAAGCTTCTAGC+TGG | 0.529020 | 8.2:+15382299 | MS.gene060557:CDS |
| GACCAGCTAGAAGCTTCGTT+AGG | 0.533754 | 8.2:-15382301 | None:intergenic |
| TCTTACCTCCCACAATTGTA+GGG | 0.534398 | 8.2:-15382654 | None:intergenic |
| TATTTGATCAAGCCCGTGCT+AGG | 0.535455 | 8.2:+15380957 | MS.gene060557:CDS |
| CTGCCGTAATGCAGCTTGGT+GGG | 0.539439 | 8.2:+15383843 | MS.gene060557:intron |
| CTTGAAAGGTGCTAATTGCC+AGG | 0.540089 | 8.2:-15382621 | None:intergenic |
| GATATTCCTCCGAGGTGGAT+AGG | 0.546749 | 8.2:-15378874 | None:intergenic |
| TGTTTGTCCCTTACAGTCCA+CGG | 0.554456 | 8.2:-15380840 | None:intergenic |
| TGTTGCAACATACATATCCA+AGG | 0.564619 | 8.2:+15381564 | MS.gene060557:CDS |
| AAGCCTTAGACTTACCCAAA+CGG | 0.566589 | 8.2:-15380499 | None:intergenic |
| AAAGTCGTCTTTGTCATCAA+CGG | 0.567068 | 8.2:-15383903 | None:intergenic |
| GACGATGTCTGCGAAATCCG+TGG | 0.569012 | 8.2:+15380823 | MS.gene060557:CDS |
| ACTGCCGTAATGCAGCTTGG+TGG | 0.570730 | 8.2:+15383842 | MS.gene060557:intron |
| CGCACAATATCTATCGAGTG+TGG | 0.573334 | 8.2:+15383165 | MS.gene060557:CDS |
| AGGGACTAAAACAACTTGAA+AGG | 0.575131 | 8.2:-15382635 | None:intergenic |
| GCAGCATGTAAAGCAAGGAC+TGG | 0.578322 | 8.2:-15383087 | None:intergenic |
| GTCAGAATAACTCCTATCAA+AGG | 0.579554 | 8.2:-15382870 | None:intergenic |
| GCTAGAAGCTTCGTTAGGAG+TGG | 0.586839 | 8.2:-15382296 | None:intergenic |
| CAGACAACACTGACAGCAGA+AGG | 0.589026 | 8.2:-15383712 | None:intergenic |
| TCTGAAAATAACTCTGGGCA+TGG | 0.589097 | 8.2:-15378823 | None:intergenic |
| GCATTTAGAAGTGAGTTGCA+GGG | 0.593011 | 8.2:+15379046 | MS.gene060557:CDS |
| TGGTCTCTGAAAATAACTCT+GGG | 0.595321 | 8.2:-15378828 | None:intergenic |
| TGTATGCGCAGGTCATCTTG+GGG | 0.596551 | 8.2:+15380591 | MS.gene060557:intron |
| AGATGTTCCTGAAAGTGCTG+GGG | 0.599940 | 8.2:+15380428 | MS.gene060557:CDS |
| TTGGTCTCGTGTTGTCCTGG+AGG | 0.601309 | 8.2:+15381529 | MS.gene060557:CDS |
| TACTGGGCTTGCACAAAGGA+GGG | 0.601541 | 8.2:-15382895 | None:intergenic |
| TTACTGGGCTTGCACAAAGG+AGG | 0.605677 | 8.2:-15382896 | None:intergenic |
| GATAGATATTGTGCGTGATG+TGG | 0.609427 | 8.2:-15383157 | None:intergenic |
| AAAATAAGACCAGTTGCAAG+AGG | 0.609602 | 8.2:-15381508 | None:intergenic |
| ATGCAGCAGCATGTAAAGCA+AGG | 0.610129 | 8.2:-15383092 | None:intergenic |
| AGGAACAGCTACAAGTGGGT+TGG | 0.613007 | 8.2:-15383692 | None:intergenic |
| GTATGCGCAGGTCATCTTGG+GGG | 0.613520 | 8.2:+15380592 | MS.gene060557:intron |
| GATGTTCCTGAAAGTGCTGG+GGG | 0.615383 | 8.2:+15380429 | MS.gene060557:CDS |
| GCAGAAGGAACAGCTACAAG+TGG | 0.624409 | 8.2:-15383697 | None:intergenic |
| TCAAACCCATAGACAGCATG+AGG | 0.627326 | 8.2:-15380779 | None:intergenic |
| GCACAATATCTATCGAGTGT+GGG | 0.631842 | 8.2:+15383166 | MS.gene060557:CDS |
| GTTCACTTCAAAGATAATCA+CGG | 0.634653 | 8.2:+15382842 | MS.gene060557:CDS |
| AACTTACTGGGCTTGCACAA+AGG | 0.635521 | 8.2:-15382899 | None:intergenic |
| TTAGTCCCTACAATTGTGGG+AGG | 0.636420 | 8.2:+15382649 | MS.gene060557:CDS |
| GTTGCAACATACATATCCAA+GGG | 0.644060 | 8.2:+15381565 | MS.gene060557:CDS |
| TTTGACGCTAGATGGACTAA+GGG | 0.646699 | 8.2:-15379103 | None:intergenic |
| TTAAGGATATTCCTCCGAGG+TGG | 0.654156 | 8.2:-15378879 | None:intergenic |
| CAGAAGGAACAGCTACAAGT+GGG | 0.665602 | 8.2:-15383696 | None:intergenic |
| AATTTGGCTTAAGAATGGCA+TGG | 0.677374 | 8.2:-15378848 | None:intergenic |
| TGGGCTTGCACAAAGGAGGG+TGG | 0.682947 | 8.2:-15382892 | None:intergenic |
| CAAATTATACCTATCCACCT+CGG | 0.703278 | 8.2:+15378865 | MS.gene060557:CDS |
| CAGCTGGCTTGTAAATACCG+AGG | 0.715500 | 8.2:-15380619 | None:intergenic |
| ATTATACCTATCCACCTCGG+AGG | 0.727862 | 8.2:+15378868 | MS.gene060557:CDS |
| TGTCAGTGTTGTCTGCATGG+CGG | 0.751349 | 8.2:+15383720 | MS.gene060557:CDS |
| TTATTAAGGATATTCCTCCG+AGG | 0.766658 | 8.2:-15378882 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATACAAAATACAT+AGG | - | chr8.2:15381653-15381672 | None:intergenic | 10.0% |
| !! | ATATATATAAAAGATACAAT+GGG | - | chr8.2:15382547-15382566 | None:intergenic | 10.0% |
| !! | TATATATATAAAAGATACAA+TGG | - | chr8.2:15382548-15382567 | None:intergenic | 10.0% |
| !!! | TAAATTTTTGATATTTTTAC+TGG | + | chr8.2:15380297-15380316 | MS.gene060557:intron | 10.0% |
| !! | AAATTATTAATCTATTGATC+TGG | - | chr8.2:15383483-15383502 | None:intergenic | 15.0% |
| !! | AATATCCTTAATAATCATTT+CGG | + | chr8.2:15378891-15378910 | MS.gene060557:CDS | 15.0% |
| !! | TAAATTAGAAACCAATTATA+TGG | + | chr8.2:15381830-15381849 | MS.gene060557:intron | 15.0% |
| !!! | AATGTTTTTGCTTTATTATT+TGG | + | chr8.2:15382791-15382810 | MS.gene060557:intron | 15.0% |
| !!! | ATTAACTTTTTCAAATGATT+AGG | - | chr8.2:15382493-15382512 | None:intergenic | 15.0% |
| !!! | TTACTATTTTACCATATAAT+TGG | - | chr8.2:15381844-15381863 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTATTTTTTCTC+TGG | + | chr8.2:15381659-15381678 | MS.gene060557:intron | 15.0% |
| !!! | TTTTACTTGTTTTGTATTAT+TGG | + | chr8.2:15378984-15379003 | MS.gene060557:intron | 15.0% |
| !! | AATAAATCATAATTAGTGGT+AGG | - | chr8.2:15380901-15380920 | None:intergenic | 20.0% |
| !! | AATAGTAAAACTTATAGGAT+TGG | + | chr8.2:15381856-15381875 | MS.gene060557:intron | 20.0% |
| !! | AATGAAAATCAGAAAAACAA+AGG | + | chr8.2:15380196-15380215 | MS.gene060557:intron | 20.0% |
| !! | ACACAATAAATCATAATTAG+TGG | - | chr8.2:15380905-15380924 | None:intergenic | 20.0% |
| !! | ATATACATTACCACAAATTT+AGG | - | chr8.2:15381968-15381987 | None:intergenic | 20.0% |
| !! | ATATTAATTGTAAGTGCTTT+AGG | + | chr8.2:15383590-15383609 | MS.gene060557:intron | 20.0% |
| !! | ATTCTGATTTATTTCATTGA+TGG | + | chr8.2:15380059-15380078 | MS.gene060557:intron | 20.0% |
| !! | CATTTGAAAAAGTTAATATC+TGG | + | chr8.2:15382496-15382515 | MS.gene060557:intron | 20.0% |
| !! | GGTAAAATAGTAAAACTTAT+AGG | + | chr8.2:15381851-15381870 | MS.gene060557:intron | 20.0% |
| !! | TGGTAATTCAAAATATAACA+GGG | - | chr8.2:15381072-15381091 | None:intergenic | 20.0% |
| !! | TTAGAAGTTACATTACTTAA+TGG | - | chr8.2:15379913-15379932 | None:intergenic | 20.0% |
| !! | TTCTGATTTATTTCATTGAT+GGG | + | chr8.2:15380060-15380079 | MS.gene060557:intron | 20.0% |
| !! | TTGACAAAAAATGAAATAAC+TGG | + | chr8.2:15379191-15379210 | MS.gene060557:intron | 20.0% |
| !!! | GTAATTGAAGTTTTGATATA+TGG | + | chr8.2:15379382-15379401 | MS.gene060557:intron | 20.0% |
| !!! | TATTAGGATGTATGTTTTTT+AGG | + | chr8.2:15383240-15383259 | MS.gene060557:intron | 20.0% |
| !!! | TATTGTTATGACTTTATTTC+AGG | + | chr8.2:15380713-15380732 | MS.gene060557:intron | 20.0% |
| !!! | TTTCAATAATTTTCTCATAC+TGG | - | chr8.2:15380461-15380480 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGTAATTGTTGAA+TGG | + | chr8.2:15379469-15379488 | MS.gene060557:intron | 20.0% |
| ! | ACATACCGAAATGATTATTA+AGG | - | chr8.2:15378899-15378918 | None:intergenic | 25.0% |
| ! | ACATAGCTAGTTATTTATTG+AGG | + | chr8.2:15381207-15381226 | MS.gene060557:intron | 25.0% |
| ! | ACCAAGAACTTTAATCTAAA+AGG | - | chr8.2:15379610-15379629 | None:intergenic | 25.0% |
| ! | AGCTATTTGTAGAATTAAGA+GGG | - | chr8.2:15383205-15383224 | None:intergenic | 25.0% |
| ! | ATCAGAAAAACAAAGGAAAA+TGG | + | chr8.2:15380203-15380222 | MS.gene060557:intron | 25.0% |
| ! | ATGACATTGAACTAAATTTC+TGG | + | chr8.2:15383506-15383525 | MS.gene060557:intron | 25.0% |
| ! | ATTATACCAAAGTAAACTGT+TGG | - | chr8.2:15382963-15382982 | None:intergenic | 25.0% |
| ! | ATTATATATACCTATGGAGT+TGG | + | chr8.2:15383281-15383300 | MS.gene060557:intron | 25.0% |
| ! | ATTGATATAATCTATCTTGC+CGG | + | chr8.2:15380014-15380033 | MS.gene060557:intron | 25.0% |
| ! | CAATCAAAATCAACTTGTAT+GGG | - | chr8.2:15381791-15381810 | None:intergenic | 25.0% |
| ! | CATGAACAGAACAAATAAAT+AGG | - | chr8.2:15381317-15381336 | None:intergenic | 25.0% |
| ! | CTACTGAACAATTAAGAAAT+TGG | - | chr8.2:15380548-15380567 | None:intergenic | 25.0% |
| ! | CTTATTGTTCTGTATAAGTT+AGG | + | chr8.2:15380266-15380285 | MS.gene060557:intron | 25.0% |
| ! | GAAAAAGTTAATATCTGGAT+AGG | + | chr8.2:15382501-15382520 | MS.gene060557:intron | 25.0% |
| ! | GAAGTTAATGTTAGCAAATT+TGG | - | chr8.2:15381460-15381479 | None:intergenic | 25.0% |
| ! | GAGACAAATATTTGAAAGAT+TGG | + | chr8.2:15381373-15381392 | MS.gene060557:intron | 25.0% |
| ! | GTACAAACAATTCATATTGA+AGG | - | chr8.2:15379272-15379291 | None:intergenic | 25.0% |
| ! | GTATACCTAAAATTCAGAAA+TGG | - | chr8.2:15379959-15379978 | None:intergenic | 25.0% |
| ! | GTGGTAATTCAAAATATAAC+AGG | - | chr8.2:15381073-15381092 | None:intergenic | 25.0% |
| ! | TAAGAAATTGGAAAGATGTT+AGG | - | chr8.2:15380536-15380555 | None:intergenic | 25.0% |
| ! | TCAATCAAAATCAACTTGTA+TGG | - | chr8.2:15381792-15381811 | None:intergenic | 25.0% |
| ! | TGACATTGAACTAAATTTCT+GGG | + | chr8.2:15383507-15383526 | MS.gene060557:intron | 25.0% |
| ! | TGATAACAATCATAAGTCAA+TGG | - | chr8.2:15381128-15381147 | None:intergenic | 25.0% |
| ! | TGTTGTTGAGTACAAATATT+AGG | + | chr8.2:15383224-15383243 | MS.gene060557:intron | 25.0% |
| ! | TTATATGTGTTAGAGTTTGT+TGG | + | chr8.2:15382692-15382711 | MS.gene060557:intron | 25.0% |
| !! | ATATAACTATGTGCTTTTCA+AGG | + | chr8.2:15380083-15380102 | MS.gene060557:intron | 25.0% |
| !! | ATGCTGATTATATATACCTA+TGG | + | chr8.2:15383275-15383294 | MS.gene060557:intron | 25.0% |
| !! | TCTTTGATAACAATCTTATG+TGG | - | chr8.2:15381092-15381111 | None:intergenic | 25.0% |
| !!! | ATGATTTATTGTGTTTTTGC+AGG | + | chr8.2:15380911-15380930 | MS.gene060557:intron | 25.0% |
| !!! | ATTATCTTTGAAGTGAACTT+GGG | - | chr8.2:15382840-15382859 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTCTGGCTTATTT+TGG | + | chr8.2:15381669-15381688 | MS.gene060557:intron | 25.0% |
| !!! | CAAGTTGATTTTGATTGAAT+TGG | + | chr8.2:15381794-15381813 | MS.gene060557:intron | 25.0% |
| !!! | CTATTTTAAAGTAGGAACAA+GGG | + | chr8.2:15379631-15379650 | MS.gene060557:intron | 25.0% |
| !!! | GACATTTTTTTTCCTTTTCT+CGG | + | chr8.2:15383751-15383770 | MS.gene060557:intron | 25.0% |
| !!! | TATAACTTGTTCAACTTACT+GGG | - | chr8.2:15382914-15382933 | None:intergenic | 25.0% |
| !!! | TATTTATTGAGGCCATTTTT+GGG | + | chr8.2:15381218-15381237 | MS.gene060557:intron | 25.0% |
| !!! | TCTATTTTAAAGTAGGAACA+AGG | + | chr8.2:15379630-15379649 | MS.gene060557:intron | 25.0% |
| !!! | TCTTGGTTCTATTTTAAAGT+AGG | + | chr8.2:15379623-15379642 | MS.gene060557:intron | 25.0% |
| !!! | TGTATGTTTTTTAGGCTTTT+AGG | + | chr8.2:15383248-15383267 | MS.gene060557:intron | 25.0% |
| !!! | TTATTTATTGAGGCCATTTT+TGG | + | chr8.2:15381217-15381236 | MS.gene060557:intron | 25.0% |
| !!! | TTTATTAACAGCTTGCTAAT+AGG | - | chr8.2:15382431-15382450 | None:intergenic | 25.0% |
| AAAATTAGCATTAACAGTCG+TGG | - | chr8.2:15379844-15379863 | None:intergenic | 30.0% | |
| AAATCATAATTAGTGGTAGG+AGG | - | chr8.2:15380898-15380917 | None:intergenic | 30.0% | |
| AAGCTAAAATAACTTCATCC+AGG | - | chr8.2:15382142-15382161 | None:intergenic | 30.0% | |
| AATACATAGGAAACCAAACA+AGG | - | chr8.2:15381640-15381659 | None:intergenic | 30.0% | |
| ACAGAACAAATAAATAGGAG+TGG | - | chr8.2:15381312-15381331 | None:intergenic | 30.0% | |
| ACTTGTTTATTGCTATGTCT+AGG | + | chr8.2:15380364-15380383 | MS.gene060557:intron | 30.0% | |
| AGACAATGTCATATAGTAGT+TGG | - | chr8.2:15380240-15380259 | None:intergenic | 30.0% | |
| AGCAATCTATGGTAAAATTC+CGG | - | chr8.2:15380036-15380055 | None:intergenic | 30.0% | |
| AGCTAAAATAACTTCATCCA+GGG | - | chr8.2:15382141-15382160 | None:intergenic | 30.0% | |
| AGGTATGGTTCTTAATGATT+AGG | + | chr8.2:15382757-15382776 | MS.gene060557:intron | 30.0% | |
| AGGTGTTTGCAAATTGAATA+GGG | - | chr8.2:15381910-15381929 | None:intergenic | 30.0% | |
| ATATCTGGATAGGATACTTT+CGG | + | chr8.2:15382511-15382530 | MS.gene060557:intron | 30.0% | |
| ATTATATAGTGCTTTGTACC+TGG | + | chr8.2:15381172-15381191 | MS.gene060557:intron | 30.0% | |
| CAATTTGCAAACACCTAAAA+AGG | + | chr8.2:15381914-15381933 | MS.gene060557:intron | 30.0% | |
| CAGCTATTTGTAGAATTAAG+AGG | - | chr8.2:15383206-15383225 | None:intergenic | 30.0% | |
| CTATTTGTAGAATTAAGAGG+GGG | - | chr8.2:15383203-15383222 | None:intergenic | 30.0% | |
| GACATTGAACTAAATTTCTG+GGG | + | chr8.2:15383508-15383527 | MS.gene060557:intron | 30.0% | |
| GATGTCAATCTTCTGTAATT+TGG | - | chr8.2:15383438-15383457 | None:intergenic | 30.0% | |
| GCTATTTGTAGAATTAAGAG+GGG | - | chr8.2:15383204-15383223 | None:intergenic | 30.0% | |
| GTTACGAGTTAGCTAATTTA+GGG | + | chr8.2:15379442-15379461 | MS.gene060557:intron | 30.0% | |
| GTTCACTTCAAAGATAATCA+CGG | + | chr8.2:15382842-15382861 | MS.gene060557:CDS | 30.0% | |
| TACCTAAAATTCAGAAATGG+AGG | - | chr8.2:15379956-15379975 | None:intergenic | 30.0% | |
| TAGCAAATTTGGCATGATAT+AGG | - | chr8.2:15381449-15381468 | None:intergenic | 30.0% | |
| TAGGTGTTTGCAAATTGAAT+AGG | - | chr8.2:15381911-15381930 | None:intergenic | 30.0% | |
| TCCCTTTCATGCATAAAAAT+AGG | - | chr8.2:15382365-15382384 | None:intergenic | 30.0% | |
| TGGATGTCAAGAATATCATT+TGG | + | chr8.2:15383129-15383148 | MS.gene060557:CDS | 30.0% | |
| TGTTAAAGATCCTGTATGAA+GGG | + | chr8.2:15379526-15379545 | MS.gene060557:intron | 30.0% | |
| TTATTCCAGGAAGAAAAGAA+TGG | - | chr8.2:15380125-15380144 | None:intergenic | 30.0% | |
| TTCTCAGACACTAAAACTTT+CGG | + | chr8.2:15381483-15381502 | MS.gene060557:intron | 30.0% | |
| TTGATTGAATTGGATCAGAT+CGG | + | chr8.2:15381804-15381823 | MS.gene060557:intron | 30.0% | |
| TTTGTTTAAATTCCGCTATG+TGG | - | chr8.2:15379804-15379823 | None:intergenic | 30.0% | |
| ! | AAAGTAAACTGTTGGCTAAA+AGG | - | chr8.2:15382955-15382974 | None:intergenic | 30.0% |
| ! | AAGTAAACTGTTGGCTAAAA+GGG | - | chr8.2:15382954-15382973 | None:intergenic | 30.0% |
| ! | ATCCTCCATTTCTGAATTTT+AGG | + | chr8.2:15379951-15379970 | MS.gene060557:intron | 30.0% |
| ! | CAGAACGAACATAATTTTTC+AGG | - | chr8.2:15383366-15383385 | None:intergenic | 30.0% |
| ! | CATGTTATTTACCATTCTAC+AGG | + | chr8.2:15382243-15382262 | MS.gene060557:intron | 30.0% |
| ! | GAATTTTACCATAGATTGCT+AGG | + | chr8.2:15380036-15380055 | MS.gene060557:intron | 30.0% |
| ! | GCATTTAAGTTCTTTATTCC+AGG | - | chr8.2:15380138-15380157 | None:intergenic | 30.0% |
| ! | GCCTTTTAGATTAAAGTTCT+TGG | + | chr8.2:15379606-15379625 | MS.gene060557:intron | 30.0% |
| ! | GGTATAATTTGGCTTAAGAA+TGG | - | chr8.2:15378856-15378875 | None:intergenic | 30.0% |
| ! | TGACTTTATTTCAGGTAACT+TGG | + | chr8.2:15380721-15380740 | MS.gene060557:intron | 30.0% |
| ! | TTTATTTCAGGTAACTTGGT+TGG | + | chr8.2:15380725-15380744 | MS.gene060557:intron | 30.0% |
| ! | TTTTAGCCAACAGTTTACTT+TGG | + | chr8.2:15382954-15382973 | MS.gene060557:intron | 30.0% |
| !! | AGAAGTTGTTTTCAGAAATC+AGG | + | chr8.2:15382213-15382232 | MS.gene060557:intron | 30.0% |
| !! | ATTTATTGTGTTTTTGCAGG+TGG | + | chr8.2:15380914-15380933 | MS.gene060557:intron | 30.0% |
| !! | CCTTTTGTCATTTGAAAAGA+CGG | + | chr8.2:15379498-15379517 | MS.gene060557:intron | 30.0% |
| !! | CTATAACTTGTTCAACTTAC+TGG | - | chr8.2:15382915-15382934 | None:intergenic | 30.0% |
| !! | CTTTTGTCATTTGAAAAGAC+GGG | + | chr8.2:15379499-15379518 | MS.gene060557:intron | 30.0% |
| !! | GAAGTTTTGATATATGGAGA+GGG | + | chr8.2:15379388-15379407 | MS.gene060557:intron | 30.0% |
| !! | GATTATCTTTGAAGTGAACT+TGG | - | chr8.2:15382841-15382860 | None:intergenic | 30.0% |
| !! | GCTTTATTATTTGGCAGTTT+TGG | + | chr8.2:15382800-15382819 | MS.gene060557:intron | 30.0% |
| !! | TGAAGTTTTGATATATGGAG+AGG | + | chr8.2:15379387-15379406 | MS.gene060557:intron | 30.0% |
| !! | TTAACTTGCATTTCCTTGTT+TGG | + | chr8.2:15381624-15381643 | MS.gene060557:intron | 30.0% |
| !! | TTTATTGTGTTTTTGCAGGT+GGG | + | chr8.2:15380915-15380934 | MS.gene060557:intron | 30.0% |
| !!! | ATGTATTGACTTTTCAGATC+GGG | + | chr8.2:15383019-15383038 | MS.gene060557:intron | 30.0% |
| !!! | CATGTATTGACTTTTCAGAT+CGG | + | chr8.2:15383018-15383037 | MS.gene060557:intron | 30.0% |
| !!! | GCCTATTTTTATGCATGAAA+GGG | + | chr8.2:15382361-15382380 | MS.gene060557:intron | 30.0% |
| !!! | TGCCTATTTTTATGCATGAA+AGG | + | chr8.2:15382360-15382379 | MS.gene060557:intron | 30.0% |
| AAAATAAGACCAGTTGCAAG+AGG | - | chr8.2:15381511-15381530 | None:intergenic | 35.0% | |
| AAAGTCGTCTTTGTCATCAA+CGG | - | chr8.2:15383906-15383925 | None:intergenic | 35.0% | |
| AAATCAACTTGTATGGGATC+AGG | - | chr8.2:15381785-15381804 | None:intergenic | 35.0% | |
| AACACTGCATATCCCAAAAA+TGG | - | chr8.2:15381233-15381252 | None:intergenic | 35.0% | |
| AAGCAATTACAGATAACCTC+AGG | + | chr8.2:15379869-15379888 | MS.gene060557:intron | 35.0% | |
| AATTACTCTTGTGTGTGTCA+TGG | + | chr8.2:15382095-15382114 | MS.gene060557:intron | 35.0% | |
| AGGGACTAAAACAACTTGAA+AGG | - | chr8.2:15382638-15382657 | None:intergenic | 35.0% | |
| ATAACTGGATGTAACCAAGA+TGG | + | chr8.2:15379206-15379225 | MS.gene060557:intron | 35.0% | |
| ATAGTTGAACACCTGTAGAA+TGG | - | chr8.2:15382257-15382276 | None:intergenic | 35.0% | |
| ATATGCAGTGTTTCTTTGTG+TGG | + | chr8.2:15381241-15381260 | MS.gene060557:intron | 35.0% | |
| ATCAGAATCCTAGCAATCTA+TGG | - | chr8.2:15380047-15380066 | None:intergenic | 35.0% | |
| ATTGTTCAGTAGTTGAAAGC+TGG | + | chr8.2:15380556-15380575 | MS.gene060557:intron | 35.0% | |
| CAAACAACAAGAAAAGCTAG+AGG | - | chr8.2:15383408-15383427 | None:intergenic | 35.0% | |
| CAAACACACACCTAAATTTG+TGG | + | chr8.2:15381955-15381974 | MS.gene060557:intron | 35.0% | |
| CAAATTATACCTATCCACCT+CGG | + | chr8.2:15378865-15378884 | MS.gene060557:CDS | 35.0% | |
| CACAAATTTAGGTGTGTGTT+TGG | - | chr8.2:15381957-15381976 | None:intergenic | 35.0% | |
| CGTGTTTGAAGAGGATATTT+AGG | - | chr8.2:15382047-15382066 | None:intergenic | 35.0% | |
| CTGTTAAAGATCCTGTATGA+AGG | + | chr8.2:15379525-15379544 | MS.gene060557:intron | 35.0% | |
| CTTACTGAGAATTATGGAGA+GGG | + | chr8.2:15379329-15379348 | MS.gene060557:intron | 35.0% | |
| GCATAGCTTATACAAGCAAT+GGG | + | chr8.2:15379293-15379312 | MS.gene060557:intron | 35.0% | |
| GGTTACGAGTTAGCTAATTT+AGG | + | chr8.2:15379441-15379460 | MS.gene060557:intron | 35.0% | |
| GTCAATCTTCTGTAATTTGG+CGG | - | chr8.2:15383435-15383454 | None:intergenic | 35.0% | |
| GTCAGAATAACTCCTATCAA+AGG | - | chr8.2:15382873-15382892 | None:intergenic | 35.0% | |
| GTGCAAATACTGTCAAGTAA+CGG | + | chr8.2:15379767-15379786 | MS.gene060557:intron | 35.0% | |
| GTTGCAACATACATATCCAA+GGG | + | chr8.2:15381565-15381584 | MS.gene060557:CDS | 35.0% | |
| TATACTAATGTGTCTCCACT+TGG | + | chr8.2:15382730-15382749 | MS.gene060557:intron | 35.0% | |
| TATGCAGTGTTTCTTTGTGT+GGG | + | chr8.2:15381242-15381261 | MS.gene060557:intron | 35.0% | |
| TCAGCTTCAACAAACATATC+TGG | + | chr8.2:15380405-15380424 | MS.gene060557:CDS | 35.0% | |
| TCTGTATAAGTTAGGTACTC+TGG | + | chr8.2:15380274-15380293 | MS.gene060557:intron | 35.0% | |
| TGATGACAAAGACGACTTTA+AGG | + | chr8.2:15383907-15383926 | MS.gene060557:CDS | 35.0% | |
| TGCATAGCTTATACAAGCAA+TGG | + | chr8.2:15379292-15379311 | MS.gene060557:intron | 35.0% | |
| TGTTGCAACATACATATCCA+AGG | + | chr8.2:15381564-15381583 | MS.gene060557:CDS | 35.0% | |
| TGTTGTAGTAACGTTTGATC+TGG | + | chr8.2:15378916-15378935 | MS.gene060557:intron | 35.0% | |
| TTATTAAGGATATTCCTCCG+AGG | - | chr8.2:15378885-15378904 | None:intergenic | 35.0% | |
| TTCTACAGGTGTTCAACTAT+TGG | + | chr8.2:15382257-15382276 | MS.gene060557:intron | 35.0% | |
| ! | AATTTGGCTTAAGAATGGCA+TGG | - | chr8.2:15378851-15378870 | None:intergenic | 35.0% |
| ! | ATGGTCTCTGAAAATAACTC+TGG | - | chr8.2:15378832-15378851 | None:intergenic | 35.0% |
| ! | ATTACCTTTTTGACGCTAGA+TGG | - | chr8.2:15379114-15379133 | None:intergenic | 35.0% |
| ! | ATTCATATTGAAGGTGTGTC+TGG | - | chr8.2:15379263-15379282 | None:intergenic | 35.0% |
| ! | CCGTCTTTTCAAATGACAAA+AGG | - | chr8.2:15379501-15379520 | None:intergenic | 35.0% |
| ! | CTAGTCCATAATCTTTGAGA+CGG | - | chr8.2:15379994-15380013 | None:intergenic | 35.0% |
| ! | TGAACTAAATTTCTGGGGAA+GGG | + | chr8.2:15383513-15383532 | MS.gene060557:intron | 35.0% |
| ! | TGGTCTCTGAAAATAACTCT+GGG | - | chr8.2:15378831-15378850 | None:intergenic | 35.0% |
| ! | TGTTGCTCTTTCTCTTTTTC+AGG | + | chr8.2:15382597-15382616 | MS.gene060557:intron | 35.0% |
| ! | TTCATATTGAAGGTGTGTCT+GGG | - | chr8.2:15379262-15379281 | None:intergenic | 35.0% |
| ! | TTCATCCATTCTTTTCTTCC+TGG | + | chr8.2:15380117-15380136 | MS.gene060557:intron | 35.0% |
| ! | TTGAACTAAATTTCTGGGGA+AGG | + | chr8.2:15383512-15383531 | MS.gene060557:intron | 35.0% |
| !! | ATGCTTGCTGTCTTTAAAAG+AGG | + | chr8.2:15381739-15381758 | MS.gene060557:intron | 35.0% |
| !! | ATGTGTTAGAGTTTGTTGGA+CGG | + | chr8.2:15382696-15382715 | MS.gene060557:intron | 35.0% |
| !! | ATTAACAGCTTGCTAATAGG+AGG | - | chr8.2:15382428-15382447 | None:intergenic | 35.0% |
| !! | GTTGCTCTTTCTCTTTTTCA+GGG | + | chr8.2:15382598-15382617 | MS.gene060557:intron | 35.0% |
| !! | GTTTTAGTCCCTACAATTGT+GGG | + | chr8.2:15382646-15382665 | MS.gene060557:CDS | 35.0% |
| !!! | AATCAGAGAAGTACTTTTGC+AGG | - | chr8.2:15382012-15382031 | None:intergenic | 35.0% |
| !!! | GGCTTATTTTGGTTGCTATT+TGG | + | chr8.2:15381680-15381699 | MS.gene060557:intron | 35.0% |
| !!! | TAATTTTCTCATACTGGCTC+AGG | - | chr8.2:15380455-15380474 | None:intergenic | 35.0% |
| !!! | TCTTGCAACTGGTCTTATTT+TGG | + | chr8.2:15381510-15381529 | MS.gene060557:CDS | 35.0% |
| !!! | TGTTTTAGTCCCTACAATTG+TGG | + | chr8.2:15382645-15382664 | MS.gene060557:CDS | 35.0% |
| AAACCAAAGAGACCGAGAAA+AGG | - | chr8.2:15383766-15383785 | None:intergenic | 40.0% | |
| AACCCAAGCCAAGAGTAAAT+AGG | - | chr8.2:15380758-15380777 | None:intergenic | 40.0% | |
| AACTTCATCCAGGGATAACA+CGG | - | chr8.2:15382132-15382151 | None:intergenic | 40.0% | |
| AAGCCTTAGACTTACCCAAA+CGG | - | chr8.2:15380502-15380521 | None:intergenic | 40.0% | |
| AAGTCGTCTTTGTCATCAAC+GGG | - | chr8.2:15383905-15383924 | None:intergenic | 40.0% | |
| ACAACAAGAAAAGCTAGAGG+TGG | - | chr8.2:15383405-15383424 | None:intergenic | 40.0% | |
| ACGAGTTAGCTAATTTAGGG+CGG | + | chr8.2:15379445-15379464 | MS.gene060557:intron | 40.0% | |
| ACTTGTATGGGATCAGGTTT+CGG | - | chr8.2:15381779-15381798 | None:intergenic | 40.0% | |
| AGACCTATTTACTCTTGGCT+TGG | + | chr8.2:15380752-15380771 | MS.gene060557:CDS | 40.0% | |
| ATACCTGGACTATAGCATAG+CGG | + | chr8.2:15379700-15379719 | MS.gene060557:intron | 40.0% | |
| ATCTTACCTCCCACAATTGT+AGG | - | chr8.2:15382658-15382677 | None:intergenic | 40.0% | |
| ATCTTCTGTAATTTGGCGGT+AGG | - | chr8.2:15383431-15383450 | None:intergenic | 40.0% | |
| ATTACAGATAACCTCAGGCT+CGG | + | chr8.2:15379874-15379893 | MS.gene060557:intron | 40.0% | |
| CAACAAGAAAAGCTAGAGGT+GGG | - | chr8.2:15383404-15383423 | None:intergenic | 40.0% | |
| CCAGTAGCAACAATTGGATT+AGG | - | chr8.2:15379073-15379092 | None:intergenic | 40.0% | |
| CCTAATCCAATTGTTGCTAC+TGG | + | chr8.2:15379070-15379089 | MS.gene060557:CDS | 40.0% | |
| CCTCTCCATAATTCTCAGTA+AGG | - | chr8.2:15379331-15379350 | None:intergenic | 40.0% | |
| CCTTACTGAGAATTATGGAG+AGG | + | chr8.2:15379328-15379347 | MS.gene060557:intron | 40.0% | |
| CGAGGTGGATAGGTATAATT+TGG | - | chr8.2:15378867-15378886 | None:intergenic | 40.0% | |
| CGTAACCTGCATAATGCATA+CGG | - | chr8.2:15379428-15379447 | None:intergenic | 40.0% | |
| CTATGTTAAGTCCTACAACC+AGG | - | chr8.2:15381193-15381212 | None:intergenic | 40.0% | |
| CTTGTCATTCTTGCTTTGCA+TGG | + | chr8.2:15382988-15383007 | MS.gene060557:intron | 40.0% | |
| GACCTATTTACTCTTGGCTT+GGG | + | chr8.2:15380753-15380772 | MS.gene060557:CDS | 40.0% | |
| GAGACAGACCTATTTACTCT+TGG | + | chr8.2:15380747-15380766 | MS.gene060557:CDS | 40.0% | |
| GATAGATATTGTGCGTGATG+TGG | - | chr8.2:15383160-15383179 | None:intergenic | 40.0% | |
| GCACAATATCTATCGAGTGT+GGG | + | chr8.2:15383166-15383185 | MS.gene060557:CDS | 40.0% | |
| GCATGCCTTACTGAGAATTA+TGG | + | chr8.2:15379323-15379342 | MS.gene060557:intron | 40.0% | |
| GCATTTAGAAGTGAGTTGCA+GGG | + | chr8.2:15379046-15379065 | MS.gene060557:CDS | 40.0% | |
| TAGTCCATCTAGCGTCAAAA+AGG | + | chr8.2:15379107-15379126 | MS.gene060557:CDS | 40.0% | |
| TCTGAAAATAACTCTGGGCA+TGG | - | chr8.2:15378826-15378845 | None:intergenic | 40.0% | |
| TCTTACCTCCCACAATTGTA+GGG | - | chr8.2:15382657-15382676 | None:intergenic | 40.0% | |
| TCTTTCTGCAGCTAGTTACA+TGG | + | chr8.2:15380654-15380673 | MS.gene060557:intron | 40.0% | |
| TCTTTGTCATCAACGGGAAT+TGG | - | chr8.2:15383899-15383918 | None:intergenic | 40.0% | |
| TGCAAAGCAAGAATGACAAG+TGG | - | chr8.2:15382988-15383007 | None:intergenic | 40.0% | |
| TGCAATGAAAAAGCCTAGCA+CGG | - | chr8.2:15380973-15380992 | None:intergenic | 40.0% | |
| TGCATTTAGAAGTGAGTTGC+AGG | + | chr8.2:15379045-15379064 | MS.gene060557:CDS | 40.0% | |
| TGCTATAGTCCAGGTATAGT+CGG | - | chr8.2:15379697-15379716 | None:intergenic | 40.0% | |
| TGTTATGGGAAGAGTGGAAA+AGG | - | chr8.2:15379674-15379693 | None:intergenic | 40.0% | |
| TTAGCACCAGTAGCAACAAT+TGG | - | chr8.2:15379079-15379098 | None:intergenic | 40.0% | |
| TTAGGTGTGTGTTTGGATTG+CGG | - | chr8.2:15381950-15381969 | None:intergenic | 40.0% | |
| TTATGGAGAGGGATGTGTAA+TGG | + | chr8.2:15379340-15379359 | MS.gene060557:intron | 40.0% | |
| ! | AACCACTCTTTTTCCCGTTT+GGG | + | chr8.2:15380485-15380504 | MS.gene060557:CDS | 40.0% |
| ! | CGGTACAAGAAAGCCTTTTT+AGG | - | chr8.2:15381930-15381949 | None:intergenic | 40.0% |
| ! | GAACTAAATTTCTGGGGAAG+GGG | + | chr8.2:15383514-15383533 | MS.gene060557:intron | 40.0% |
| ! | GTTTCTTTGTGTGGGTTACT+TGG | + | chr8.2:15381250-15381269 | MS.gene060557:intron | 40.0% |
| ! | TAAACTGTTGGCTAAAAGGG+TGG | - | chr8.2:15382951-15382970 | None:intergenic | 40.0% |
| ! | TAACCACTCTTTTTCCCGTT+TGG | + | chr8.2:15380484-15380503 | MS.gene060557:CDS | 40.0% |
| ! | TTTCCTTTTCTCGGTCTCTT+TGG | + | chr8.2:15383760-15383779 | MS.gene060557:intron | 40.0% |
| !! | GCGGAAGTGTTAAAAACTCA+AGG | + | chr8.2:15383048-15383067 | MS.gene060557:CDS | 40.0% |
| !! | TCCATAATCTTTGAGACGGA+GGG | - | chr8.2:15379990-15380009 | None:intergenic | 40.0% |
| !! | TGACTTTAACTTGTATGCGC+AGG | + | chr8.2:15380580-15380599 | MS.gene060557:intron | 40.0% |
| !! | TGTGTTAGAGTTTGTTGGAC+GGG | + | chr8.2:15382697-15382716 | MS.gene060557:intron | 40.0% |
| !! | TTTGACGCTAGATGGACTAA+GGG | - | chr8.2:15379106-15379125 | None:intergenic | 40.0% |
| !!! | GCTAGGCTTTTTCATTGCAA+TGG | + | chr8.2:15380974-15380993 | MS.gene060557:CDS | 40.0% |
| !!! | TTTTGACGCTAGATGGACTA+AGG | - | chr8.2:15379107-15379126 | None:intergenic | 40.0% |
| AACTTACTGGGCTTGCACAA+AGG | - | chr8.2:15382902-15382921 | None:intergenic | 45.0% | |
| AAGACAGTTCTTACAGCAGC+TGG | - | chr8.2:15380638-15380657 | None:intergenic | 45.0% | |
| ACCTGCATAATGCATACGGA+AGG | - | chr8.2:15379424-15379443 | None:intergenic | 45.0% | |
| AGCCTTAGACTTACCCAAAC+GGG | - | chr8.2:15380501-15380520 | None:intergenic | 45.0% | |
| AGGAGTGGCAGACATCAATA+TGG | - | chr8.2:15381297-15381316 | None:intergenic | 45.0% | |
| AGTGCTTTGTACCTGGTTGT+AGG | + | chr8.2:15381179-15381198 | MS.gene060557:intron | 45.0% | |
| ATCACGGTCACACCTTTGAT+AGG | + | chr8.2:15382858-15382877 | MS.gene060557:CDS | 45.0% | |
| ATGCAGCAGCATGTAAAGCA+AGG | - | chr8.2:15383095-15383114 | None:intergenic | 45.0% | |
| ATTACTGCCGTAATGCAGCT+TGG | + | chr8.2:15383839-15383858 | MS.gene060557:intron | 45.0% | |
| ATTATACCTATCCACCTCGG+AGG | + | chr8.2:15378868-15378887 | MS.gene060557:CDS | 45.0% | |
| ATTCCGCTATGCTATAGTCC+AGG | - | chr8.2:15379706-15379725 | None:intergenic | 45.0% | |
| CAGAAGGAACAGCTACAAGT+GGG | - | chr8.2:15383699-15383718 | None:intergenic | 45.0% | |
| CGCACAATATCTATCGAGTG+TGG | + | chr8.2:15383165-15383184 | MS.gene060557:CDS | 45.0% | |
| GAACCATACCTTACACCAAG+TGG | - | chr8.2:15382748-15382767 | None:intergenic | 45.0% | |
| GAACTTACAGCAGCATCAAC+AGG | - | chr8.2:15382335-15382354 | None:intergenic | 45.0% | |
| GCAATGAAAAAGCCTAGCAC+GGG | - | chr8.2:15380972-15380991 | None:intergenic | 45.0% | |
| GCATTAACAGTCGTGGATAG+TGG | - | chr8.2:15379837-15379856 | None:intergenic | 45.0% | |
| GCTATAGCATTGCCACATAG+CGG | + | chr8.2:15379789-15379808 | MS.gene060557:intron | 45.0% | |
| GGTTTCCTCATGCTGTCTAT+GGG | + | chr8.2:15380774-15380793 | MS.gene060557:CDS | 45.0% | |
| GTTGATGCTGCTGTAAGTTC+TGG | + | chr8.2:15382335-15382354 | MS.gene060557:intron | 45.0% | |
| TACCCAAACGGGAAAAAGAG+TGG | - | chr8.2:15380490-15380509 | None:intergenic | 45.0% | |
| TATACAAGCAATGGGCCTAG+TGG | + | chr8.2:15379301-15379320 | MS.gene060557:intron | 45.0% | |
| TATTTGATCAAGCCCGTGCT+AGG | + | chr8.2:15380957-15380976 | MS.gene060557:CDS | 45.0% | |
| TCAAACCCATAGACAGCATG+AGG | - | chr8.2:15380782-15380801 | None:intergenic | 45.0% | |
| TCAGCTTTGCGTGTTTGAAG+AGG | - | chr8.2:15382056-15382075 | None:intergenic | 45.0% | |
| TGCTAAGATGCCAACTCCAT+AGG | - | chr8.2:15383294-15383313 | None:intergenic | 45.0% | |
| TGTTTGTCCCTTACAGTCCA+CGG | - | chr8.2:15380843-15380862 | None:intergenic | 45.0% | |
| TTAAGGATATTCCTCCGAGG+TGG | - | chr8.2:15378882-15378901 | None:intergenic | 45.0% | |
| TTAGTCCCTACAATTGTGGG+AGG | + | chr8.2:15382649-15382668 | MS.gene060557:CDS | 45.0% | |
| TTCCCGTTTGGGTAAGTCTA+AGG | + | chr8.2:15380496-15380515 | MS.gene060557:intron | 45.0% | |
| TTGTATGCGCAGGTCATCTT+GGG | + | chr8.2:15380590-15380609 | MS.gene060557:intron | 45.0% | |
| ! | AACAGACTAGCCCTTCATAC+AGG | - | chr8.2:15379539-15379558 | None:intergenic | 45.0% |
| !! | AGATGTTCCTGAAAGTGCTG+GGG | + | chr8.2:15380428-15380447 | MS.gene060557:CDS | 45.0% |
| !! | ATGTGTCTCCACTTGGTGTA+AGG | + | chr8.2:15382737-15382756 | MS.gene060557:intron | 45.0% |
| !! | ATTTTGGTCTCGTGTTGTCC+TGG | + | chr8.2:15381526-15381545 | MS.gene060557:CDS | 45.0% |
| !! | CCAGGTATAGTCGGTGTTAT+GGG | - | chr8.2:15379688-15379707 | None:intergenic | 45.0% |
| !! | CTTGAAAGGTGCTAATTGCC+AGG | - | chr8.2:15382624-15382643 | None:intergenic | 45.0% |
| !! | GAGATGTTCCTGAAAGTGCT+GGG | + | chr8.2:15380427-15380446 | MS.gene060557:CDS | 45.0% |
| !! | GTCCATAATCTTTGAGACGG+AGG | - | chr8.2:15379991-15380010 | None:intergenic | 45.0% |
| !! | TCCAGGTATAGTCGGTGTTA+TGG | - | chr8.2:15379689-15379708 | None:intergenic | 45.0% |
| !! | TCTCCACTTGGTGTAAGGTA+TGG | + | chr8.2:15382742-15382761 | MS.gene060557:intron | 45.0% |
| !!! | TCTTTCTCTTTTTCAGGGCC+TGG | + | chr8.2:15382603-15382622 | MS.gene060557:intron | 45.0% |
| !!! | TTTCTTTAATTTTTTTTTTT+TGG | + | chr8.2:15380999-15381018 | MS.gene060557:intron | 5.0% |
| ACATTTGATGCCTGACCTCC+AGG | - | chr8.2:15381547-15381566 | None:intergenic | 50.0% | |
| ACTCCCACCAAGCTGCATTA+CGG | - | chr8.2:15383849-15383868 | None:intergenic | 50.0% | |
| AGAGAGAGCAACGTTTCCCT+TGG | - | chr8.2:15381584-15381603 | None:intergenic | 50.0% | |
| AGGAACAGCTACAAGTGGGT+TGG | - | chr8.2:15383695-15383714 | None:intergenic | 50.0% | |
| ATCTATCGAGTGTGGGATGC+AGG | + | chr8.2:15383173-15383192 | MS.gene060557:CDS | 50.0% | |
| CAGACAACACTGACAGCAGA+AGG | - | chr8.2:15383715-15383734 | None:intergenic | 50.0% | |
| CTCCTAACGAAGCTTCTAGC+TGG | + | chr8.2:15382299-15382318 | MS.gene060557:CDS | 50.0% | |
| CTTGTATGCGCAGGTCATCT+TGG | + | chr8.2:15380589-15380608 | MS.gene060557:intron | 50.0% | |
| GAAAAAGCAATCCGAGCCTG+AGG | - | chr8.2:15379888-15379907 | None:intergenic | 50.0% | |
| GACCAGCTAGAAGCTTCGTT+AGG | - | chr8.2:15382304-15382323 | None:intergenic | 50.0% | |
| GATATTCCTCCGAGGTGGAT+AGG | - | chr8.2:15378877-15378896 | None:intergenic | 50.0% | |
| GCAGAAGGAACAGCTACAAG+TGG | - | chr8.2:15383700-15383719 | None:intergenic | 50.0% | |
| GCAGCATGTAAAGCAAGGAC+TGG | - | chr8.2:15383090-15383109 | None:intergenic | 50.0% | |
| GCCCTCCGTCTCAAAGATTA+TGG | + | chr8.2:15379986-15380005 | MS.gene060557:intron | 50.0% | |
| GCCTTCCGTATGCATTATGC+AGG | + | chr8.2:15379420-15379439 | MS.gene060557:intron | 50.0% | |
| GCTAGAAGCTTCGTTAGGAG+TGG | - | chr8.2:15382299-15382318 | None:intergenic | 50.0% | |
| GGGTTTCCTCATGCTGTCTA+TGG | + | chr8.2:15380773-15380792 | MS.gene060557:CDS | 50.0% | |
| GTGCTCTAGCTGTGTATTGG+AGG | + | chr8.2:15383867-15383886 | MS.gene060557:CDS | 50.0% | |
| TACTGGGCTTGCACAAAGGA+GGG | - | chr8.2:15382898-15382917 | None:intergenic | 50.0% | |
| TCTCAGTAAGGCATGCCACT+AGG | - | chr8.2:15379319-15379338 | None:intergenic | 50.0% | |
| TGCTGTCAGTGTTGTCTGCA+TGG | + | chr8.2:15383717-15383736 | MS.gene060557:CDS | 50.0% | |
| TGTATGCGCAGGTCATCTTG+GGG | + | chr8.2:15380591-15380610 | MS.gene060557:intron | 50.0% | |
| TGTCAGTGTTGTCTGCATGG+CGG | + | chr8.2:15383720-15383739 | MS.gene060557:CDS | 50.0% | |
| TGTCTGCATGGCGGTAAGAT+AGG | + | chr8.2:15383729-15383748 | MS.gene060557:intron | 50.0% | |
| TGTTTGCAGAGCTCTGCACT+TGG | + | chr8.2:15383643-15383662 | MS.gene060557:intron | 50.0% | |
| TTACTGGGCTTGCACAAAGG+AGG | - | chr8.2:15382899-15382918 | None:intergenic | 50.0% | |
| ! | AAGCTAGAGGTGGGTTCTCT+TGG | - | chr8.2:15383395-15383414 | None:intergenic | 50.0% |
| ! | AGAGGTGGGTTCTCTTGGTA+TGG | - | chr8.2:15383390-15383409 | None:intergenic | 50.0% |
| ! | CCCATAACACCGACTATACC+TGG | + | chr8.2:15379685-15379704 | MS.gene060557:intron | 50.0% |
| ! | CTAGTTGATGCACTGTGCTG+TGG | + | chr8.2:15381413-15381432 | MS.gene060557:intron | 50.0% |
| ! | GAGGTGGGTTCTCTTGGTAT+GGG | - | chr8.2:15383389-15383408 | None:intergenic | 50.0% |
| ! | GCGAAATCCGTGGACTGTAA+GGG | + | chr8.2:15380833-15380852 | MS.gene060557:intron | 50.0% |
| ! | GGAACAAGGGAAGAGTGCAT+TGG | + | chr8.2:15379644-15379663 | MS.gene060557:intron | 50.0% |
| ! | GGAGATGTTCCTGAAAGTGC+TGG | + | chr8.2:15380426-15380445 | MS.gene060557:CDS | 50.0% |
| ! | GGAGTGCTCTAGCTGTGTAT+TGG | + | chr8.2:15383864-15383883 | MS.gene060557:CDS | 50.0% |
| ! | TGCGAAATCCGTGGACTGTA+AGG | + | chr8.2:15380832-15380851 | MS.gene060557:intron | 50.0% |
| ! | TTTTCAGATCGGGCAAGTCG+CGG | + | chr8.2:15383029-15383048 | MS.gene060557:intron | 50.0% |
| !! | AGTCGGTGTTATGGGAAGAG+TGG | - | chr8.2:15379680-15379699 | None:intergenic | 50.0% |
| !! | CAGCTGGCTTGTAAATACCG+AGG | - | chr8.2:15380622-15380641 | None:intergenic | 50.0% |
| !! | GATGTTCCTGAAAGTGCTGG+GGG | + | chr8.2:15380429-15380448 | MS.gene060557:CDS | 50.0% |
| !! | GTGTTTTTGCAGGTGGGTGT+GGG | + | chr8.2:15380921-15380940 | MS.gene060557:intron | 50.0% |
| !! | TGTGTTTTTGCAGGTGGGTG+TGG | + | chr8.2:15380920-15380939 | MS.gene060557:intron | 50.0% |
| !! | TGTTTTTGCAGGTGGGTGTG+GGG | + | chr8.2:15380922-15380941 | MS.gene060557:intron | 50.0% |
| ACTGCCGTAATGCAGCTTGG+TGG | + | chr8.2:15383842-15383861 | MS.gene060557:intron | 55.0% | |
| CTGCCGTAATGCAGCTTGGT+GGG | + | chr8.2:15383843-15383862 | MS.gene060557:intron | 55.0% | |
| CTTTCGGCTCCTCTTGCAAC+TGG | + | chr8.2:15381499-15381518 | MS.gene060557:CDS | 55.0% | |
| GAAACTGACGCACGCCATCT+TGG | - | chr8.2:15379223-15379242 | None:intergenic | 55.0% | |
| GACGATGTCTGCGAAATCCG+TGG | + | chr8.2:15380823-15380842 | MS.gene060557:CDS | 55.0% | |
| GTATGCGCAGGTCATCTTGG+GGG | + | chr8.2:15380592-15380611 | MS.gene060557:intron | 55.0% | |
| TTGGTCTCGTGTTGTCCTGG+AGG | + | chr8.2:15381529-15381548 | MS.gene060557:CDS | 55.0% | |
| CAGCTGTGCCGTGTTATCCC+TGG | + | chr8.2:15382121-15382140 | MS.gene060557:intron | 60.0% | |
| CTCGTGTTGTCCTGGAGGTC+AGG | + | chr8.2:15381534-15381553 | MS.gene060557:CDS | 60.0% | |
| GGCGTGCGTCAGTTTCGTGT+TGG | + | chr8.2:15379227-15379246 | MS.gene060557:intron | 60.0% | |
| GTCATCTTGGGGGCTCTCCT+CGG | + | chr8.2:15380602-15380621 | MS.gene060557:CDS | 60.0% | |
| TGGGCTTGCACAAAGGAGGG+TGG | - | chr8.2:15382895-15382914 | None:intergenic | 60.0% | |
| CTCAGGCCCCCAGCACTTTC+AGG | - | chr8.2:15380438-15380457 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 15378816 | 15383934 | 15378816 | ID=MS.gene060557 |
| chr8.2 | mRNA | 15378816 | 15383934 | 15378816 | ID=MS.gene060557.t1;Parent=MS.gene060557 |
| chr8.2 | exon | 15378816 | 15378912 | 15378816 | ID=MS.gene060557.t1.exon1;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15378816 | 15378912 | 15378816 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15379020 | 15379128 | 15379020 | ID=MS.gene060557.t1.exon2;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15379020 | 15379128 | 15379020 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15380386 | 15380506 | 15380386 | ID=MS.gene060557.t1.exon3;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15380386 | 15380506 | 15380386 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15380602 | 15380643 | 15380602 | ID=MS.gene060557.t1.exon4;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15380602 | 15380643 | 15380602 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15380735 | 15380848 | 15380735 | ID=MS.gene060557.t1.exon5;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15380735 | 15380848 | 15380735 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15380933 | 15380995 | 15380933 | ID=MS.gene060557.t1.exon6;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15380933 | 15380995 | 15380933 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15381490 | 15381617 | 15381490 | ID=MS.gene060557.t1.exon7;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15381490 | 15381617 | 15381490 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15382265 | 15382346 | 15382265 | ID=MS.gene060557.t1.exon8;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15382265 | 15382346 | 15382265 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15382619 | 15382670 | 15382619 | ID=MS.gene060557.t1.exon9;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15382619 | 15382670 | 15382619 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15382817 | 15382914 | 15382817 | ID=MS.gene060557.t1.exon10;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15382817 | 15382914 | 15382817 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15383036 | 15383194 | 15383036 | ID=MS.gene060557.t1.exon11;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15383036 | 15383194 | 15383036 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15383652 | 15383741 | 15383652 | ID=MS.gene060557.t1.exon12;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15383652 | 15383741 | 15383652 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| chr8.2 | exon | 15383857 | 15383934 | 15383857 | ID=MS.gene060557.t1.exon13;Parent=MS.gene060557.t1 |
| chr8.2 | CDS | 15383857 | 15383934 | 15383857 | ID=cds.MS.gene060557.t1;Parent=MS.gene060557.t1 |
| Gene Sequence |
| Protein sequence |
