Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46944.t1 | XP_013459635.1 | 98.2 | 274 | 5 | 0 | 1 | 274 | 1 | 274 | 3.70E-142 | 514.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46944.t1 | Q6PGS5 | 30.6 | 219 | 138 | 7 | 61 | 273 | 38 | 248 | 1.6e-16 | 88.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46944.t1 | A0A072UW60 | 98.2 | 274 | 5 | 0 | 1 | 274 | 1 | 274 | 2.6e-142 | 514.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049621 | MS.gene46944 | PPI |
| MS.gene46944 | MS.gene05093 | PPI |
| MS.gene46944 | MS.gene55688 | PPI |
| MS.gene46944 | MS.gene008402 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46944.t1 | MTR_3g450410 | 98.175 | 274 | 5 | 0 | 1 | 274 | 1 | 274 | 0.0 | 550 |
| MS.gene46944.t1 | MTR_5g090550 | 82.117 | 274 | 49 | 0 | 1 | 274 | 1 | 274 | 4.35e-165 | 458 |
| MS.gene46944.t1 | MTR_3g063070 | 46.250 | 240 | 129 | 0 | 35 | 274 | 22 | 261 | 3.98e-76 | 233 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46944.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 1.44e-134 | 381 |
| MS.gene46944.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 1.44e-134 | 381 |
| MS.gene46944.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 1.44e-134 | 381 |
| MS.gene46944.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 1.44e-134 | 381 |
| MS.gene46944.t1 | AT4G19645 | 67.164 | 268 | 87 | 1 | 8 | 274 | 1 | 268 | 1.44e-134 | 381 |
| MS.gene46944.t1 | AT1G31300 | 66.038 | 265 | 90 | 0 | 9 | 273 | 11 | 275 | 1.19e-130 | 371 |
| MS.gene46944.t1 | AT1G31300 | 66.038 | 265 | 90 | 0 | 9 | 273 | 11 | 275 | 1.19e-130 | 371 |
| MS.gene46944.t1 | AT1G31300 | 66.038 | 265 | 90 | 0 | 9 | 273 | 11 | 275 | 1.19e-130 | 371 |
| MS.gene46944.t1 | AT4G10360 | 48.750 | 240 | 123 | 0 | 35 | 274 | 20 | 259 | 4.06e-85 | 255 |
| MS.gene46944.t1 | AT4G10360 | 48.750 | 240 | 123 | 0 | 35 | 274 | 20 | 259 | 4.06e-85 | 255 |
| MS.gene46944.t1 | AT4G10360 | 48.750 | 240 | 123 | 0 | 35 | 274 | 20 | 259 | 4.06e-85 | 255 |
Find 54 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCATATACTTCTGTTAT+TGG | 0.196404 | 3.2:-37942711 | MS.gene46944:CDS |
| CGAACAAATTAGCTTGATTC+TGG | 0.228269 | 3.2:+37942763 | None:intergenic |
| TATGATCTTACTCAACTTAT+TGG | 0.254801 | 3.2:-37942558 | MS.gene46944:CDS |
| GAAGAGCTTCGAACTGTAAT+AGG | 0.311254 | 3.2:+37942293 | None:intergenic |
| TCATTGTCAACATTTGCATT+GGG | 0.323093 | 3.2:-37942272 | MS.gene46944:CDS |
| TTCATTGTCAACATTTGCAT+TGG | 0.358921 | 3.2:-37942273 | MS.gene46944:CDS |
| GTAAACGAACAGAAGTATTC+TGG | 0.370676 | 3.2:+37939993 | None:intergenic |
| TGGTTCGCAAAGATCGTTAG+AGG | 0.376846 | 3.2:-37938020 | MS.gene46944:CDS |
| CCCATTGATGAGATAAGCTT+TGG | 0.385071 | 3.2:+37940564 | None:intergenic |
| CAAAGATCGTTAGAGGCTTA+AGG | 0.385903 | 3.2:-37938013 | MS.gene46944:CDS |
| CCACCAATAACAGAAGTATA+TGG | 0.388555 | 3.2:+37942708 | None:intergenic |
| TACCATCTCAAATTGATTCC+TGG | 0.395796 | 3.2:+37940890 | None:intergenic |
| GTTGAGAAAATGCACATCAT+TGG | 0.402546 | 3.2:-37938095 | MS.gene46944:CDS |
| CCAAAGCTTATCTCATCAAT+GGG | 0.429340 | 3.2:-37940564 | MS.gene46944:CDS |
| TCAAGCTAATTTGTTCGTAA+AGG | 0.431743 | 3.2:-37942757 | MS.gene46944:CDS |
| ATCTCTGAGGCAACTACTCC+AGG | 0.434527 | 3.2:-37940908 | MS.gene46944:CDS |
| TCCAAAGCTTATCTCATCAA+TGG | 0.440866 | 3.2:-37940565 | MS.gene46944:CDS |
| CCATATACTTCTGTTATTGG+TGG | 0.445086 | 3.2:-37942708 | MS.gene46944:CDS |
| TGTAATATTCCTTGCTTGGA+TGG | 0.447077 | 3.2:-37940539 | MS.gene46944:intron |
| GAGTAGTTGCCTCAGAGATT+AGG | 0.454474 | 3.2:+37940912 | None:intergenic |
| TATCTGTCATGAACCTGGTT+TGG | 0.458120 | 3.2:-37938040 | MS.gene46944:CDS |
| TTGAGAAAATGCACATCATT+GGG | 0.461302 | 3.2:-37938094 | MS.gene46944:CDS |
| AACGTATTGAGTGGAATAAC+CGG | 0.465078 | 3.2:-37942494 | MS.gene46944:intron |
| TGGCATGTTTGCTTGCAAAC+TGG | 0.469547 | 3.2:-37942688 | MS.gene46944:intron |
| CTGTAATAGGATCGGTAGAT+TGG | 0.475660 | 3.2:+37942306 | None:intergenic |
| ATTGATAATTGTTGTGCCTA+TGG | 0.481976 | 3.2:-37938066 | MS.gene46944:CDS |
| TATTCAATGTTGAGCGGGGA+AGG | 0.489055 | 3.2:-37940956 | MS.gene46944:CDS |
| TAGCATATTCAATGTTGAGC+GGG | 0.497660 | 3.2:-37940961 | MS.gene46944:CDS |
| CGATCTTTGCGAACCAAACC+AGG | 0.501339 | 3.2:+37938027 | None:intergenic |
| GGGTTGTAATATTCCTTGCT+TGG | 0.504045 | 3.2:-37940543 | MS.gene46944:CDS |
| TCGATGTAGCTGGTATGAAA+AGG | 0.530241 | 3.2:-37940588 | MS.gene46944:CDS |
| TGAAGGTATCTCGATGTAGC+TGG | 0.530510 | 3.2:-37940598 | MS.gene46944:intron |
| GGTGCTATCTGTCATGAACC+TGG | 0.548421 | 3.2:-37938045 | MS.gene46944:CDS |
| ATTGTCAACATTTGCATTGG+GGG | 0.548873 | 3.2:-37942270 | MS.gene46944:intron |
| TAGTTACCTGATCAAAATGC+AGG | 0.552272 | 3.2:+37939953 | None:intergenic |
| GATCAAAATGCAGGTATACA+TGG | 0.559510 | 3.2:+37939962 | None:intergenic |
| TTGTTGTGACAGGTTTCGGT+TGG | 0.559751 | 3.2:-37941193 | MS.gene46944:intron |
| CATTGTCAACATTTGCATTG+GGG | 0.560792 | 3.2:-37942271 | MS.gene46944:CDS |
| GGTTATTCCACTCAATACGT+TGG | 0.568185 | 3.2:+37942496 | None:intergenic |
| CGAAAATCCAACGTATTGAG+TGG | 0.569693 | 3.2:-37942503 | MS.gene46944:CDS |
| ATTCAATGTTGAGCGGGGAA+GGG | 0.589083 | 3.2:-37940955 | MS.gene46944:CDS |
| TAGAGGCTTAAGGAAGACAT+TGG | 0.591235 | 3.2:-37938003 | MS.gene46944:CDS |
| AACAACTATGTCATTATACA+TGG | 0.593875 | 3.2:-37942357 | MS.gene46944:CDS |
| TAAGGAAGACATTGGCAAAG+AGG | 0.594031 | 3.2:-37937995 | MS.gene46944:CDS |
| CTCCAGGAATCAATTTGAGA+TGG | 0.594464 | 3.2:-37940892 | MS.gene46944:intron |
| GCTTCGAACTGTAATAGGAT+CGG | 0.610862 | 3.2:+37942298 | None:intergenic |
| TTTAACCCACCATCCAAGCA+AGG | 0.626280 | 3.2:+37940530 | None:intergenic |
| TACTCATATCCACCAAGAGA+AGG | 0.629716 | 3.2:+37941130 | None:intergenic |
| AGGGCAGCTTTACACATACA+TGG | 0.641473 | 3.2:-37940936 | MS.gene46944:CDS |
| TTCATGACAGATAGCACCAT+AGG | 0.645212 | 3.2:+37938050 | None:intergenic |
| AGCATATTCAATGTTGAGCG+GGG | 0.660869 | 3.2:-37940960 | MS.gene46944:CDS |
| GTAGCATATTCAATGTTGAG+CGG | 0.687821 | 3.2:-37940962 | MS.gene46944:CDS |
| ATACATGGTCCTAATCTCTG+AGG | 0.715652 | 3.2:-37940921 | MS.gene46944:CDS |
| CAAAGCTTATCTCATCAATG+GGG | 0.751977 | 3.2:-37940563 | MS.gene46944:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAACAAACAAA+TGG | + | chr3.2:37939041-37939060 | None:intergenic | 10.0% |
| !! | GTTAATATATAATTATAACT+TGG | - | chr3.2:37940360-37940379 | MS.gene46944:intron | 10.0% |
| !!! | ATTTTAAAATTCAACTATAA+GGG | + | chr3.2:37939932-37939951 | None:intergenic | 10.0% |
| !!! | GATATATTTTAAATTTTAGA+AGG | + | chr3.2:37940938-37940957 | None:intergenic | 10.0% |
| !!! | GTAAAAAAAAATTTTGTTTT+TGG | - | chr3.2:37940437-37940456 | MS.gene46944:intron | 10.0% |
| !! | AAATAGAAATGGTAAAATTA+GGG | - | chr3.2:37941684-37941703 | MS.gene46944:intron | 15.0% |
| !! | ATATCTAAAAAAAATTGTGT+CGG | + | chr3.2:37939255-37939274 | None:intergenic | 15.0% |
| !! | CTAAGTAAAAATAATAAGTT+TGG | - | chr3.2:37941558-37941577 | MS.gene46944:intron | 15.0% |
| !! | TAAAAATAAATCTGCTAATA+AGG | - | chr3.2:37938768-37938787 | MS.gene46944:intron | 15.0% |
| !! | TAAATAGAAATGGTAAAATT+AGG | - | chr3.2:37941683-37941702 | MS.gene46944:intron | 15.0% |
| !!! | AAAAAACAAAATATTTTGCA+GGG | - | chr3.2:37940540-37940559 | MS.gene46944:CDS | 15.0% |
| !!! | AAAACAAGATTTTTAAGATA+AGG | - | chr3.2:37941740-37941759 | MS.gene46944:intron | 15.0% |
| !!! | AAACAAAATTTTTTTTTACC+AGG | + | chr3.2:37940436-37940455 | None:intergenic | 15.0% |
| !!! | AAACAAGATTTTTAAGATAA+GGG | - | chr3.2:37941741-37941760 | MS.gene46944:intron | 15.0% |
| !!! | AACAAAATTTTTTTTTACCA+GGG | + | chr3.2:37940435-37940454 | None:intergenic | 15.0% |
| !!! | AACAAATTTTTTTTTTTACC+AGG | - | chr3.2:37940671-37940690 | MS.gene46944:intron | 15.0% |
| !!! | AATATTTTTTTAGAGAACTT+TGG | + | chr3.2:37941480-37941499 | None:intergenic | 15.0% |
| !!! | ACAAATTTTTTTTTTTACCA+GGG | - | chr3.2:37940672-37940691 | MS.gene46944:intron | 15.0% |
| !!! | ATAGTTGAATTTTAAAATGA+GGG | - | chr3.2:37939934-37939953 | MS.gene46944:intron | 15.0% |
| !!! | CATTTTAAAATTCAACTATA+AGG | + | chr3.2:37939933-37939952 | None:intergenic | 15.0% |
| !!! | TAAAAAACAAAATATTTTGC+AGG | - | chr3.2:37940539-37940558 | MS.gene46944:intron | 15.0% |
| !!! | TATAGTTGAATTTTAAAATG+AGG | - | chr3.2:37939933-37939952 | MS.gene46944:intron | 15.0% |
| !! | AAAAGATACATTTCTATCAA+TGG | + | chr3.2:37938335-37938354 | None:intergenic | 20.0% |
| !! | AATCGTTAAAAGAAAAAAGT+AGG | + | chr3.2:37939463-37939482 | None:intergenic | 20.0% |
| !! | ATAAATTATCTTAAAGAGCT+AGG | - | chr3.2:37939174-37939193 | MS.gene46944:intron | 20.0% |
| !! | ATCTTATAATGTACAAAAAG+TGG | - | chr3.2:37941239-37941258 | MS.gene46944:intron | 20.0% |
| !! | ATGTCATTGCATATAATTTA+TGG | - | chr3.2:37942369-37942388 | MS.gene46944:CDS | 20.0% |
| !! | ATTATAACTTGGCTAAAATA+TGG | - | chr3.2:37940371-37940390 | MS.gene46944:intron | 20.0% |
| !! | ATTCAACTACATAATAAAGT+TGG | + | chr3.2:37939725-37939744 | None:intergenic | 20.0% |
| !! | TATATACTTATGAATTCAGA+GGG | - | chr3.2:37941658-37941677 | MS.gene46944:intron | 20.0% |
| !! | TCTTATAATGTACAAAAAGT+GGG | - | chr3.2:37941240-37941259 | MS.gene46944:intron | 20.0% |
| !! | TGATATGATATCTCAAAATA+AGG | + | chr3.2:37940339-37940358 | None:intergenic | 20.0% |
| !! | TTAAAATTTCAAACTCAAGT+AGG | - | chr3.2:37940971-37940990 | MS.gene46944:CDS | 20.0% |
| !! | TTATATACTTATGAATTCAG+AGG | - | chr3.2:37941657-37941676 | MS.gene46944:intron | 20.0% |
| !!! | AAGTTAAATTTCATTTTTGC+GGG | + | chr3.2:37938812-37938831 | None:intergenic | 20.0% |
| !!! | AAGTTTTTCAATGAGAAAAA+GGG | - | chr3.2:37942060-37942079 | MS.gene46944:intron | 20.0% |
| !!! | ACAACTTTTTTCTATTAGAT+GGG | + | chr3.2:37942432-37942451 | None:intergenic | 20.0% |
| !!! | AGAAAACAAAAAATTTTGCA+GGG | - | chr3.2:37940642-37940661 | MS.gene46944:intron | 20.0% |
| !!! | AGATATTTTGTTTTTTGTCA+TGG | - | chr3.2:37938718-37938737 | MS.gene46944:intron | 20.0% |
| !!! | CAAAAACAAAAAATTTTGCA+AGG | + | chr3.2:37940528-37940509 | None:intergenic | 20.0% |
| !!! | CAAAAACAAAAAATTTTGCA+GGG | - | chr3.2:37940509-37940528 | MS.gene46944:intron | 20.0% |
| !!! | CAAGTTAAATTTCATTTTTG+CGG | + | chr3.2:37938813-37938832 | None:intergenic | 20.0% |
| !!! | CTGATTTTGTAATGATATTT+TGG | - | chr3.2:37939631-37939650 | MS.gene46944:intron | 20.0% |
| !!! | GATATTTTGTTTTTTGTCAT+GGG | - | chr3.2:37938719-37938738 | MS.gene46944:intron | 20.0% |
| !!! | GCATTAAAAAGTTAAGTTTT+GGG | - | chr3.2:37941003-37941022 | MS.gene46944:intron | 20.0% |
| !!! | GTTTTATGAAATTTTACACA+AGG | + | chr3.2:37941829-37941848 | None:intergenic | 20.0% |
| !!! | TAACATTTTGATGAATTACT+TGG | - | chr3.2:37939079-37939098 | MS.gene46944:intron | 20.0% |
| !!! | TAAGTTTTTCAATGAGAAAA+AGG | - | chr3.2:37942059-37942078 | MS.gene46944:intron | 20.0% |
| !!! | TAGAAAACAAAAAATTTTGC+AGG | - | chr3.2:37940641-37940660 | MS.gene46944:intron | 20.0% |
| !!! | TAGTTGAATTTTAAAATGAG+GGG | - | chr3.2:37939935-37939954 | MS.gene46944:intron | 20.0% |
| !!! | TCAAAAACAAAAAATTTTGC+AGG | - | chr3.2:37940508-37940527 | MS.gene46944:intron | 20.0% |
| !!! | TGCATTAAAAAGTTAAGTTT+TGG | - | chr3.2:37941002-37941021 | MS.gene46944:intron | 20.0% |
| ! | AAAGTTATGAGGCTAAAATA+TGG | + | chr3.2:37940730-37940749 | None:intergenic | 25.0% |
| ! | AAATATATTTCAAACTGCAG+CGG | + | chr3.2:37940286-37940305 | None:intergenic | 25.0% |
| ! | AAATGGTAAAATTAGGGTTA+AGG | - | chr3.2:37941690-37941709 | MS.gene46944:intron | 25.0% |
| ! | AACAACTATGTCATTATACA+TGG | - | chr3.2:37938433-37938452 | MS.gene46944:intron | 25.0% |
| ! | AATGGTAAAATTAGGGTTAA+GGG | - | chr3.2:37941691-37941710 | MS.gene46944:intron | 25.0% |
| ! | ACTTGACTTCATATTAACAT+TGG | - | chr3.2:37939770-37939789 | MS.gene46944:intron | 25.0% |
| ! | ATATTGTTCAATCATTCAAC+AGG | - | chr3.2:37942673-37942692 | MS.gene46944:intron | 25.0% |
| ! | ATTCCATATACTTCTGTTAT+TGG | - | chr3.2:37938079-37938098 | MS.gene46944:CDS | 25.0% |
| ! | CAACACATTGTAAATGTAAA+TGG | - | chr3.2:37942345-37942364 | MS.gene46944:CDS | 25.0% |
| ! | CATCTAATAGAAAAAAGTTG+TGG | - | chr3.2:37942431-37942450 | MS.gene46944:intron | 25.0% |
| ! | CATTGCATATAATTTATGGT+AGG | - | chr3.2:37942373-37942392 | MS.gene46944:CDS | 25.0% |
| ! | CTCATGATACAAAATGTTTA+TGG | - | chr3.2:37938361-37938380 | MS.gene46944:intron | 25.0% |
| ! | CTTATAATGTACAAAAAGTG+GGG | - | chr3.2:37941241-37941260 | MS.gene46944:intron | 25.0% |
| ! | GATGTTGTATCTTCATATTA+TGG | - | chr3.2:37942453-37942472 | MS.gene46944:intron | 25.0% |
| ! | TACATTATAAGATGCTATGT+TGG | + | chr3.2:37941232-37941251 | None:intergenic | 25.0% |
| ! | TAGTTGTTAAGCATGAATAA+TGG | + | chr3.2:37942645-37942664 | None:intergenic | 25.0% |
| ! | TATGATCTTACTCAACTTAT+TGG | - | chr3.2:37938232-37938251 | MS.gene46944:intron | 25.0% |
| ! | TGTACACTGATATTAGATAA+AGG | - | chr3.2:37941289-37941308 | MS.gene46944:intron | 25.0% |
| ! | TTTGTTGCATGAACAAAATT+AGG | - | chr3.2:37938959-37938978 | MS.gene46944:intron | 25.0% |
| !! | ACTAAAGTTGTTGTTAGTAT+TGG | - | chr3.2:37941077-37941096 | MS.gene46944:intron | 25.0% |
| !! | GAATTTTCTATTGTTAACAC+TGG | - | chr3.2:37941196-37941215 | MS.gene46944:intron | 25.0% |
| !! | TATGAAACATGATTTGTGTT+CGG | - | chr3.2:37938665-37938684 | MS.gene46944:intron | 25.0% |
| !!! | AACATCATTTTTAGGAAAAG+TGG | - | chr3.2:37942022-37942041 | MS.gene46944:intron | 25.0% |
| !!! | AAGTTTTGGGTGAATTTAAA+GGG | - | chr3.2:37941016-37941035 | MS.gene46944:intron | 25.0% |
| !!! | ATATTTTAGCCTCATAACTT+TGG | - | chr3.2:37940729-37940748 | MS.gene46944:intron | 25.0% |
| !!! | ATTTTTAAGATAAGGGTTCT+AGG | - | chr3.2:37941748-37941767 | MS.gene46944:intron | 25.0% |
| !!! | CACAACTTTTTTCTATTAGA+TGG | + | chr3.2:37942433-37942452 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGGGTGAATTTAA+AGG | - | chr3.2:37941015-37941034 | MS.gene46944:intron | 25.0% |
| !!! | TGTTTTTGTTGTTTTTGTGA+AGG | - | chr3.2:37940175-37940194 | MS.gene46944:intron | 25.0% |
| AAGAATTACAAGCTTCCTAT+AGG | - | chr3.2:37941952-37941971 | MS.gene46944:intron | 30.0% | |
| AATGATCTCACATGAAACAA+TGG | + | chr3.2:37942481-37942500 | None:intergenic | 30.0% | |
| ATAGCTCTTGTCATAGTATA+GGG | - | chr3.2:37942098-37942117 | MS.gene46944:intron | 30.0% | |
| ATCAAATGTTGGCAATTGAA+GGG | - | chr3.2:37941714-37941733 | MS.gene46944:intron | 30.0% | |
| ATGCCAATCATCACAAAAAT+GGG | - | chr3.2:37940604-37940623 | MS.gene46944:intron | 30.0% | |
| ATTTACAATGTGTTGTGTTG+TGG | + | chr3.2:37942340-37942359 | None:intergenic | 30.0% | |
| CAGATAAAAGAAAATGTTGC+AGG | + | chr3.2:37939545-37939564 | None:intergenic | 30.0% | |
| GGGGTGATTAATTATCAAAA+TGG | - | chr3.2:37941260-37941279 | MS.gene46944:intron | 30.0% | |
| GTTGAAATGTAGAACAAAGT+AGG | + | chr3.2:37939511-37939530 | None:intergenic | 30.0% | |
| TAAGGATACTTCAACAAACA+TGG | + | chr3.2:37940321-37940340 | None:intergenic | 30.0% | |
| TATAGCTCTTGTCATAGTAT+AGG | - | chr3.2:37942097-37942116 | MS.gene46944:intron | 30.0% | |
| TATGCCAATCATCACAAAAA+TGG | - | chr3.2:37940603-37940622 | MS.gene46944:intron | 30.0% | |
| TCATTGTCAACATTTGCATT+GGG | - | chr3.2:37938518-37938537 | MS.gene46944:intron | 30.0% | |
| TGTCAAGAATAGACTCATAA+TGG | + | chr3.2:37942142-37942161 | None:intergenic | 30.0% | |
| TTATCTTAAAGAGCTAGGAA+AGG | - | chr3.2:37939179-37939198 | MS.gene46944:intron | 30.0% | |
| TTCATTGTCAACATTTGCAT+TGG | - | chr3.2:37938517-37938536 | MS.gene46944:intron | 30.0% | |
| TTGAGAAAATGCACATCATT+GGG | - | chr3.2:37942696-37942715 | MS.gene46944:CDS | 30.0% | |
| ! | AACACTTGCATTTGACTTTA+TGG | + | chr3.2:37941794-37941813 | None:intergenic | 30.0% |
| ! | ACAATTTTATTGTTTCGCCT+AGG | + | chr3.2:37941393-37941412 | None:intergenic | 30.0% |
| ! | ATTGATAATTGTTGTGCCTA+TGG | - | chr3.2:37942724-37942743 | MS.gene46944:CDS | 30.0% |
| ! | ATTTTCCTCTCACAAATGAA+CGG | + | chr3.2:37942172-37942191 | None:intergenic | 30.0% |
| ! | ATTTTCGATAAGCTGGAATA+GGG | + | chr3.2:37938274-37938293 | None:intergenic | 30.0% |
| ! | CAACATTTTCTTTTATCTGG+TGG | - | chr3.2:37939546-37939565 | MS.gene46944:intron | 30.0% |
| ! | CAATTTTATTGTTTCGCCTA+GGG | + | chr3.2:37941392-37941411 | None:intergenic | 30.0% |
| ! | CTGCAACATTTTCTTTTATC+TGG | - | chr3.2:37939543-37939562 | MS.gene46944:intron | 30.0% |
| ! | TGAACCCATTTTGTAGTTTT+TGG | + | chr3.2:37940567-37940586 | None:intergenic | 30.0% |
| ! | TTTTGGTATTTTCCTTCTCT+TGG | - | chr3.2:37939648-37939667 | MS.gene46944:intron | 30.0% |
| !! | ATATTTGTTGTGACAGGTTT+CGG | - | chr3.2:37939593-37939612 | MS.gene46944:intron | 30.0% |
| !! | CATTTTGATGAATTACTTGG+CGG | - | chr3.2:37939082-37939101 | MS.gene46944:intron | 30.0% |
| !! | CTGAAAAACATTCTGAAGTT+TGG | + | chr3.2:37939279-37939298 | None:intergenic | 30.0% |
| !! | CTTCATATTAACATTGGTTC+AGG | - | chr3.2:37939776-37939795 | MS.gene46944:intron | 30.0% |
| !! | TCAAGCTAATTTGTTCGTAA+AGG | - | chr3.2:37938033-37938052 | MS.gene46944:CDS | 30.0% |
| !! | TGTCACGAAACATCATTTTT+AGG | - | chr3.2:37942014-37942033 | MS.gene46944:intron | 30.0% |
| !! | TGTTTTTCAGCAAAATGCAT+TGG | - | chr3.2:37939289-37939308 | MS.gene46944:intron | 30.0% |
| !! | TTTTTGAAAATAGTCCCTCA+GGG | - | chr3.2:37940478-37940497 | MS.gene46944:intron | 30.0% |
| !! | TTTTTGAAAATAGTCCCTGA+GGG | + | chr3.2:37940495-37940514 | None:intergenic | 30.0% |
| !!! | GAGAGTGAGCAATTTTTTAT+GGG | + | chr3.2:37942204-37942223 | None:intergenic | 30.0% |
| !!! | GAGATACTTTGTTTTTCACA+TGG | + | chr3.2:37938899-37938918 | None:intergenic | 30.0% |
| !!! | TGAGAGTGAGCAATTTTTTA+TGG | + | chr3.2:37942205-37942224 | None:intergenic | 30.0% |
| AAAAATTGCTCACTCTCAAC+TGG | - | chr3.2:37942207-37942226 | MS.gene46944:intron | 35.0% | |
| AAAGAATATAGTCCACCCAT+AGG | + | chr3.2:37938623-37938642 | None:intergenic | 35.0% | |
| AAATGTTGCAGGTCACAAAA+TGG | + | chr3.2:37939534-37939553 | None:intergenic | 35.0% | |
| AACAAATGGTACTCAACTCA+AGG | + | chr3.2:37939027-37939046 | None:intergenic | 35.0% | |
| AACGTATTGAGTGGAATAAC+CGG | - | chr3.2:37938296-37938315 | MS.gene46944:intron | 35.0% | |
| AATGTTGCAGGTCACAAAAT+GGG | + | chr3.2:37939533-37939552 | None:intergenic | 35.0% | |
| AGGGACCAAAAACTACAAAA+TGG | - | chr3.2:37940559-37940578 | MS.gene46944:CDS | 35.0% | |
| AGTTATGTTCTCATCATGTG+TGG | - | chr3.2:37942539-37942558 | MS.gene46944:CDS | 35.0% | |
| ATAGTATAGGGTCAAAGGAA+GGG | - | chr3.2:37942110-37942129 | MS.gene46944:intron | 35.0% | |
| ATATATGTACTCGTGTCTGT+AGG | + | chr3.2:37942621-37942640 | None:intergenic | 35.0% | |
| ATTAGATGGGATGAATCACA+TGG | + | chr3.2:37942419-37942438 | None:intergenic | 35.0% | |
| ATTGTCAACATTTGCATTGG+GGG | - | chr3.2:37938520-37938539 | MS.gene46944:intron | 35.0% | |
| CAAAGCTTATCTCATCAATG+GGG | - | chr3.2:37940227-37940246 | MS.gene46944:intron | 35.0% | |
| CAATGGAAACATTCAGTTAC+CGG | + | chr3.2:37938318-37938337 | None:intergenic | 35.0% | |
| CATTGTCAACATTTGCATTG+GGG | - | chr3.2:37938519-37938538 | MS.gene46944:intron | 35.0% | |
| CCAAAGCTTATCTCATCAAT+GGG | - | chr3.2:37940226-37940245 | MS.gene46944:intron | 35.0% | |
| CCATATACTTCTGTTATTGG+TGG | - | chr3.2:37938082-37938101 | MS.gene46944:CDS | 35.0% | |
| CGAAAACTGAAGTAAAGTCT+AGG | + | chr3.2:37941177-37941196 | None:intergenic | 35.0% | |
| CTCAGATACGATATTAGTAG+TGG | + | chr3.2:37938595-37938614 | None:intergenic | 35.0% | |
| GATCAAAATGCAGGTATACA+TGG | + | chr3.2:37940831-37940850 | None:intergenic | 35.0% | |
| GATCAAATGTTGGCAATTGA+AGG | - | chr3.2:37941713-37941732 | MS.gene46944:intron | 35.0% | |
| GATTTGAAAGTTGTGGTGTA+TGG | - | chr3.2:37940876-37940895 | MS.gene46944:intron | 35.0% | |
| GGGACCAAAAACTACAAAAT+GGG | - | chr3.2:37940560-37940579 | MS.gene46944:CDS | 35.0% | |
| GTAGCATATTCAATGTTGAG+CGG | - | chr3.2:37939828-37939847 | MS.gene46944:intron | 35.0% | |
| GTATAGAAAGGAAATGCAGA+GGG | - | chr3.2:37941142-37941161 | MS.gene46944:CDS | 35.0% | |
| GTGTTATACTTAAGTCACGT+TGG | - | chr3.2:37942263-37942282 | MS.gene46944:intron | 35.0% | |
| GTTGAGAAAATGCACATCAT+TGG | - | chr3.2:37942695-37942714 | MS.gene46944:CDS | 35.0% | |
| TAACTACACTATTCACACAC+TGG | - | chr3.2:37940854-37940873 | MS.gene46944:intron | 35.0% | |
| TAGCATATTCAATGTTGAGC+GGG | - | chr3.2:37939829-37939848 | MS.gene46944:intron | 35.0% | |
| TAGTTACCTGATCAAAATGC+AGG | + | chr3.2:37940840-37940859 | None:intergenic | 35.0% | |
| TATAGAAAGGAAATGCAGAG+GGG | - | chr3.2:37941143-37941162 | MS.gene46944:CDS | 35.0% | |
| TATATAACCAAGAACCAACC+TGG | + | chr3.2:37941644-37941663 | None:intergenic | 35.0% | |
| TATGTGACTTATGTCACGTT+CGG | - | chr3.2:37942295-37942314 | MS.gene46944:CDS | 35.0% | |
| TCAGAGGGAGTAAATAGAAA+TGG | - | chr3.2:37941673-37941692 | MS.gene46944:intron | 35.0% | |
| TCCAAAGCTTATCTCATCAA+TGG | - | chr3.2:37940225-37940244 | MS.gene46944:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr3.2:37940030-37940049 | MS.gene46944:intron | 35.0% | |
| TGCCAATCATCACAAAAATG+GGG | - | chr3.2:37940605-37940624 | MS.gene46944:intron | 35.0% | |
| TGTAATATTCCTTGCTTGGA+TGG | - | chr3.2:37940251-37940270 | MS.gene46944:intron | 35.0% | |
| TGTATAGAAAGGAAATGCAG+AGG | - | chr3.2:37941141-37941160 | MS.gene46944:CDS | 35.0% | |
| TTGTCATAGTATAGGGTCAA+AGG | - | chr3.2:37942105-37942124 | MS.gene46944:intron | 35.0% | |
| ! | CCACCAATAACAGAAGTATA+TGG | + | chr3.2:37938085-37938104 | None:intergenic | 35.0% |
| ! | CGAACAAATTAGCTTGATTC+TGG | + | chr3.2:37938030-37938049 | None:intergenic | 35.0% |
| ! | CGTATCTGAGATAAACCTAT+GGG | - | chr3.2:37938605-37938624 | MS.gene46944:intron | 35.0% |
| ! | GACTTAAGTCACGTGATTTT+GGG | + | chr3.2:37942237-37942256 | None:intergenic | 35.0% |
| ! | GATACGATATTAGTAGTGGA+AGG | + | chr3.2:37938591-37938610 | None:intergenic | 35.0% |
| ! | GATTTTCGATAAGCTGGAAT+AGG | + | chr3.2:37938275-37938294 | None:intergenic | 35.0% |
| ! | GTGAAAAACAAAGTATCTCG+TGG | - | chr3.2:37938900-37938919 | MS.gene46944:intron | 35.0% |
| ! | TACCATCTCAAATTGATTCC+TGG | + | chr3.2:37939903-37939922 | None:intergenic | 35.0% |
| ! | TCGTATCTGAGATAAACCTA+TGG | - | chr3.2:37938604-37938623 | MS.gene46944:intron | 35.0% |
| ! | TGACTTAAGTCACGTGATTT+TGG | + | chr3.2:37942238-37942257 | None:intergenic | 35.0% |
| ! | TTGGTGGATATGAGTATGTA+AGG | - | chr3.2:37939667-37939686 | MS.gene46944:intron | 35.0% |
| ! | TTTAAAATGAGGGGTAACCT+TGG | - | chr3.2:37939944-37939963 | MS.gene46944:intron | 35.0% |
| ! | TTTTCACATGGCAGATTTAC+AGG | + | chr3.2:37938887-37938906 | None:intergenic | 35.0% |
| !! | GTAAACGAACAGAAGTATTC+TGG | + | chr3.2:37940800-37940819 | None:intergenic | 35.0% |
| !! | GTTTTTGAAAATAGTCCCTC+AGG | - | chr3.2:37940477-37940496 | MS.gene46944:intron | 35.0% |
| !! | GTTTTTGAAAATAGTCCCTG+AGG | + | chr3.2:37940496-37940515 | None:intergenic | 35.0% |
| !! | TATTGCATTGCTCGTTTTTC+AGG | - | chr3.2:37938207-37938226 | MS.gene46944:intron | 35.0% |
| !! | TGTATACCTGCATTTTGATC+AGG | - | chr3.2:37940831-37940850 | MS.gene46944:intron | 35.0% |
| !! | TGTTCGATATTTGTTGTGAC+AGG | - | chr3.2:37939587-37939606 | MS.gene46944:intron | 35.0% |
| !! | TTTAAGATAAGGGTTCTAGG+TGG | - | chr3.2:37941751-37941770 | MS.gene46944:intron | 35.0% |
| !!! | GAGAGAGTGTTTATTTTGTG+AGG | - | chr3.2:37938981-37939000 | MS.gene46944:intron | 35.0% |
| !!! | GTTTTTTGTCATGGGTTTCT+AGG | - | chr3.2:37938727-37938746 | MS.gene46944:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr3.2:37940031-37940050 | None:intergenic | 35.0% |
| AAAAATCTTAGAACCAGCCC+TGG | + | chr3.2:37941365-37941384 | None:intergenic | 40.0% | |
| AACCTGCAAATAGACCATTC+CGG | + | chr3.2:37940776-37940795 | None:intergenic | 40.0% | |
| AATATTCCTTGCTTGGATGG+TGG | - | chr3.2:37940254-37940273 | MS.gene46944:intron | 40.0% | |
| AATCCTTATGCACCAAAGCT+AGG | - | chr3.2:37941924-37941943 | MS.gene46944:intron | 40.0% | |
| AATTCTTCACTCCCTAGCTT+TGG | + | chr3.2:37941939-37941958 | None:intergenic | 40.0% | |
| ACAATGTGTTGTGTTGTGGA+TGG | + | chr3.2:37942336-37942355 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr3.2:37940024-37940043 | MS.gene46944:intron | 40.0% | |
| AGCATATTCAATGTTGAGCG+GGG | - | chr3.2:37939830-37939849 | MS.gene46944:intron | 40.0% | |
| AGGGTTAAGGGATCAAATGT+TGG | - | chr3.2:37941703-37941722 | MS.gene46944:intron | 40.0% | |
| ATACACTACACACCCAGTTT+GGG | + | chr3.2:37941126-37941145 | None:intergenic | 40.0% | |
| ATACATGGTCCTAATCTCTG+AGG | - | chr3.2:37939869-37939888 | MS.gene46944:intron | 40.0% | |
| ATATCGCCTTTCTTTCCGAT+TGG | - | chr3.2:37939393-37939412 | MS.gene46944:intron | 40.0% | |
| ATATTCCTTGCTTGGATGGT+GGG | - | chr3.2:37940255-37940274 | MS.gene46944:intron | 40.0% | |
| ATCCTTATGCACCAAAGCTA+GGG | - | chr3.2:37941925-37941944 | MS.gene46944:intron | 40.0% | |
| ATTCAACTATAAGGGCAACC+CGG | + | chr3.2:37940122-37940141 | None:intergenic | 40.0% | |
| ATTTGCATTGGGGGTAAGTA+TGG | - | chr3.2:37938529-37938548 | MS.gene46944:intron | 40.0% | |
| CAAAACGAGGCATATTTGCA+GGG | + | chr3.2:37940404-37940423 | None:intergenic | 40.0% | |
| CAAAGATCGTTAGAGGCTTA+AGG | - | chr3.2:37942777-37942796 | MS.gene46944:CDS | 40.0% | |
| CACACTGGATTTGAAAGTTG+TGG | - | chr3.2:37940869-37940888 | MS.gene46944:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr3.2:37940025-37940044 | MS.gene46944:intron | 40.0% | |
| CATAGTATAGGGTCAAAGGA+AGG | - | chr3.2:37942109-37942128 | MS.gene46944:intron | 40.0% | |
| CCAATAGGACCAAAGTTATG+AGG | + | chr3.2:37940741-37940760 | None:intergenic | 40.0% | |
| CCCATTGATGAGATAAGCTT+TGG | + | chr3.2:37940229-37940248 | None:intergenic | 40.0% | |
| CCTCATAACTTTGGTCCTAT+TGG | - | chr3.2:37940738-37940757 | MS.gene46944:intron | 40.0% | |
| CGAAAATCCAACGTATTGAG+TGG | - | chr3.2:37938287-37938306 | MS.gene46944:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr3.2:37940056-37940075 | MS.gene46944:intron | 40.0% | |
| CTCCAGGAATCAATTTGAGA+TGG | - | chr3.2:37939898-37939917 | MS.gene46944:intron | 40.0% | |
| CTGTAATAGGATCGGTAGAT+TGG | + | chr3.2:37938487-37938506 | None:intergenic | 40.0% | |
| GAACGTGACATAAGTCACAT+AGG | + | chr3.2:37942296-37942315 | None:intergenic | 40.0% | |
| GAAGAGCTTCGAACTGTAAT+AGG | + | chr3.2:37938500-37938519 | None:intergenic | 40.0% | |
| GCTTCGAACTGTAATAGGAT+CGG | + | chr3.2:37938495-37938514 | None:intergenic | 40.0% | |
| GGGTTGTAATATTCCTTGCT+TGG | - | chr3.2:37940247-37940266 | MS.gene46944:intron | 40.0% | |
| GGTTAAGTCATTCTGCAATG+AGG | - | chr3.2:37938921-37938940 | MS.gene46944:intron | 40.0% | |
| GGTTATTCCACTCAATACGT+TGG | + | chr3.2:37938297-37938316 | None:intergenic | 40.0% | |
| GTCATGTGACTGTAAAGTCA+CGG | - | chr3.2:37939986-37940005 | MS.gene46944:CDS | 40.0% | |
| TAAAACCAAAACGAGACGCA+GGG | - | chr3.2:37940697-37940716 | MS.gene46944:intron | 40.0% | |
| TAAGGAAGACATTGGCAAAG+AGG | - | chr3.2:37942795-37942814 | MS.gene46944:CDS | 40.0% | |
| TACTCATATCCACCAAGAGA+AGG | + | chr3.2:37939663-37939682 | None:intergenic | 40.0% | |
| TAGAGGCTTAAGGAAGACAT+TGG | - | chr3.2:37942787-37942806 | MS.gene46944:CDS | 40.0% | |
| TATACACTACACACCCAGTT+TGG | + | chr3.2:37941127-37941146 | None:intergenic | 40.0% | |
| TATCTGTCATGAACCTGGTT+TGG | - | chr3.2:37942750-37942769 | MS.gene46944:CDS | 40.0% | |
| TCATGTGACTGTAAAGTCAC+GGG | - | chr3.2:37939987-37940006 | MS.gene46944:CDS | 40.0% | |
| TCCATTCCAATCGGAAAGAA+AGG | + | chr3.2:37939402-37939421 | None:intergenic | 40.0% | |
| TCGATGTAGCTGGTATGAAA+AGG | - | chr3.2:37940202-37940221 | MS.gene46944:intron | 40.0% | |
| TGATGAATTACTTGGCGGAA+CGG | - | chr3.2:37939087-37939106 | MS.gene46944:intron | 40.0% | |
| TGGGTGTGTAGTGTATAGAA+AGG | - | chr3.2:37941130-37941149 | MS.gene46944:CDS | 40.0% | |
| TGTTGTGGATGGAAGAAAGA+AGG | + | chr3.2:37942325-37942344 | None:intergenic | 40.0% | |
| TTCATGACAGATAGCACCAT+AGG | + | chr3.2:37942743-37942762 | None:intergenic | 40.0% | |
| TTCTTTCCGATTGGAATGGA+TGG | - | chr3.2:37939402-37939421 | MS.gene46944:intron | 40.0% | |
| ! | AATGGATGGTTCGGATCTAA+TGG | - | chr3.2:37939416-37939435 | MS.gene46944:intron | 40.0% |
| ! | ACGTTGGATTTTCGATAAGC+TGG | + | chr3.2:37938281-37938300 | None:intergenic | 40.0% |
| ! | ATCTGAGATAAACCTATGGG+TGG | - | chr3.2:37938608-37938627 | MS.gene46944:intron | 40.0% |
| ! | TGGTATTTTCCTTCTCTTGG+TGG | - | chr3.2:37939651-37939670 | MS.gene46944:intron | 40.0% |
| !! | CTATTGGACTTGTTGCTTAC+CGG | - | chr3.2:37940754-37940773 | MS.gene46944:intron | 40.0% |
| !! | GACCCCATTTTTGTGATGAT+TGG | + | chr3.2:37940610-37940629 | None:intergenic | 40.0% |
| !! | GTTTGGTGCCCCTAAAAAAA+TGG | - | chr3.2:37941575-37941594 | MS.gene46944:intron | 40.0% |
| !! | TAGCTTTGGTGCATAAGGAT+TGG | + | chr3.2:37941925-37941944 | None:intergenic | 40.0% |
| !!! | AGGGCTGGTTCTAAGATTTT+TGG | - | chr3.2:37941364-37941383 | MS.gene46944:intron | 40.0% |
| !!! | TCTAAGATTTTTGGTGCCCT+AGG | - | chr3.2:37941373-37941392 | MS.gene46944:intron | 40.0% |
| AGAAGGGTGGTAGAAGTGAA+AGG | - | chr3.2:37942565-37942584 | MS.gene46944:intron | 45.0% | |
| AGGGCAGCTTTACACATACA+TGG | - | chr3.2:37939854-37939873 | MS.gene46944:intron | 45.0% | |
| ATTCAATGTTGAGCGGGGAA+GGG | - | chr3.2:37939835-37939854 | MS.gene46944:intron | 45.0% | |
| CAACTTTACTAGTTGCGCCA+AGG | + | chr3.2:37939964-37939983 | None:intergenic | 45.0% | |
| CAGGGACTAAAACCAAAACG+AGG | + | chr3.2:37940709-37940690 | None:intergenic | 45.0% | |
| CCAAAACGAGGCATATTTGC+AGG | + | chr3.2:37940405-37940424 | None:intergenic | 45.0% | |
| CCTCTCACAAATGAACGGTA+AGG | + | chr3.2:37942167-37942186 | None:intergenic | 45.0% | |
| CCTTACCGTTCATTTGTGAG+AGG | - | chr3.2:37942164-37942183 | MS.gene46944:intron | 45.0% | |
| CGGTAAGCAACAAGTCCAAT+AGG | + | chr3.2:37940756-37940775 | None:intergenic | 45.0% | |
| CTAAAACCAAAACGAGACGC+AGG | - | chr3.2:37940696-37940715 | MS.gene46944:intron | 45.0% | |
| GAGTAGTTGCCTCAGAGATT+AGG | + | chr3.2:37939881-37939900 | None:intergenic | 45.0% | |
| GCCTTTCTTTCCGATTGGAA+TGG | - | chr3.2:37939398-37939417 | MS.gene46944:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr3.2:37940055-37940074 | MS.gene46944:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr3.2:37940052-37940071 | MS.gene46944:intron | 45.0% | |
| TACACTACACACCCAGTTTG+GGG | + | chr3.2:37941125-37941144 | None:intergenic | 45.0% | |
| TACCGGAATGGTCTATTTGC+AGG | - | chr3.2:37940771-37940790 | MS.gene46944:intron | 45.0% | |
| TATTCAATGTTGAGCGGGGA+AGG | - | chr3.2:37939834-37939853 | MS.gene46944:intron | 45.0% | |
| TATTGGATAGCAGCACGAGA+TGG | - | chr3.2:37941094-37941113 | MS.gene46944:intron | 45.0% | |
| TCATCATGTGTGGAGCAGAA+GGG | - | chr3.2:37942549-37942568 | MS.gene46944:CDS | 45.0% | |
| TCCGAACCATCCATTCCAAT+CGG | + | chr3.2:37939411-37939430 | None:intergenic | 45.0% | |
| TCCGATTGGAATGGATGGTT+CGG | - | chr3.2:37939407-37939426 | MS.gene46944:intron | 45.0% | |
| TGGCATGTTTGCTTGCAAAC+TGG | - | chr3.2:37938102-37938121 | MS.gene46944:intron | 45.0% | |
| TGGTTCGCAAAGATCGTTAG+AGG | - | chr3.2:37942770-37942789 | MS.gene46944:CDS | 45.0% | |
| TGTGTTGCGTCATTGAAGCA+AGG | - | chr3.2:37939227-37939246 | MS.gene46944:intron | 45.0% | |
| TTGTTGTGACAGGTTTCGGT+TGG | - | chr3.2:37939597-37939616 | MS.gene46944:intron | 45.0% | |
| TTTAACCCACCATCCAAGCA+AGG | + | chr3.2:37940263-37940282 | None:intergenic | 45.0% | |
| ! | CCTGCAAATATGCCTCGTTT+TGG | - | chr3.2:37940402-37940421 | MS.gene46944:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr3.2:37940020-37940039 | None:intergenic | 45.0% |
| !! | TGAAGGTATCTCGATGTAGC+TGG | - | chr3.2:37940192-37940211 | MS.gene46944:intron | 45.0% |
| !!! | CTCGTTTTGGTTTTAGTCCC+TGG | - | chr3.2:37940415-37940434 | MS.gene46944:intron | 45.0% |
| !!! | CTCGTTTTGGTTTTAGTCCC+TGG | + | chr3.2:37940434-37940415 | None:intergenic | 45.0% |
| !!! | AAATATTTTGTTTTTTAAAA+AGG | + | chr3.2:37940536-37940555 | None:intergenic | 5.0% |
| AAAGTCACGGGTTCAAGTCC+TGG | - | chr3.2:37939999-37940018 | MS.gene46944:CDS | 50.0% | |
| AACCAAGAACCAACCTGGTG+TGG | + | chr3.2:37941639-37941658 | None:intergenic | 50.0% | |
| ACACTACACACCCAGTTTGG+GGG | + | chr3.2:37941124-37941143 | None:intergenic | 50.0% | |
| AGAGTTTGACCATCCAACGC+TGG | - | chr3.2:37941337-37941356 | MS.gene46944:intron | 50.0% | |
| CCTAAAAAAATGGCGCCCCT+GGG | - | chr3.2:37941585-37941604 | MS.gene46944:intron | 50.0% | |
| CGATCTTTGCGAACCAAACC+AGG | + | chr3.2:37942766-37942785 | None:intergenic | 50.0% | |
| CTCATCATGTGTGGAGCAGA+AGG | - | chr3.2:37942548-37942567 | MS.gene46944:CDS | 50.0% | |
| ! | GGTGCTATCTGTCATGAACC+TGG | - | chr3.2:37942745-37942764 | MS.gene46944:CDS | 50.0% |
| ! | TTAGTCCCTGCGTCTCGTTT+TGG | + | chr3.2:37940705-37940724 | None:intergenic | 50.0% |
| !! | ATCTCTGAGGCAACTACTCC+AGG | - | chr3.2:37939882-37939901 | MS.gene46944:intron | 50.0% |
| !! | CTCCCTAGCTTTGGTGCATA+AGG | + | chr3.2:37941930-37941949 | None:intergenic | 50.0% |
| !! | GGACTTGTTGCTTACCGGAA+TGG | - | chr3.2:37940759-37940778 | MS.gene46944:intron | 50.0% |
| !!! | CAGGGGCGCCATTTTTTTAG+GGG | + | chr3.2:37941586-37941605 | None:intergenic | 50.0% |
| !!! | CCAGGGGCGCCATTTTTTTA+GGG | + | chr3.2:37941587-37941606 | None:intergenic | 50.0% |
| AGATGGCCAACCCCCAAACT+GGG | - | chr3.2:37941111-37941130 | MS.gene46944:intron | 55.0% | |
| CCCTAAAAAAATGGCGCCCC+TGG | - | chr3.2:37941584-37941603 | MS.gene46944:intron | 55.0% | |
| TACACACCCAGTTTGGGGGT+TGG | + | chr3.2:37941120-37941139 | None:intergenic | 55.0% | |
| TCATGTGTGGAGCAGAAGGG+TGG | - | chr3.2:37942552-37942571 | MS.gene46944:CDS | 55.0% | |
| !! | ACCATCCAACGCTGGTTCCA+GGG | - | chr3.2:37941345-37941364 | MS.gene46944:intron | 55.0% |
| !!! | CCCAGGGGCGCCATTTTTTT+AGG | + | chr3.2:37941588-37941607 | None:intergenic | 55.0% |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3.2:37940100-37940119 | MS.gene46944:intron | 60.0% | |
| CATACGCAAGGTCCGGGAAG+GGG | + | chr3.2:37940083-37940102 | None:intergenic | 60.0% | |
| CTGAAGCTCCCGCATACGCA+AGG | + | chr3.2:37940095-37940114 | None:intergenic | 60.0% | |
| CTTCCCGGACCTTGCGTATG+CGG | - | chr3.2:37940083-37940102 | MS.gene46944:intron | 60.0% | |
| GAGATGGCCAACCCCCAAAC+TGG | - | chr3.2:37941110-37941129 | MS.gene46944:intron | 60.0% | |
| GCATACGCAAGGTCCGGGAA+GGG | + | chr3.2:37940084-37940103 | None:intergenic | 60.0% | |
| TTCCCGGACCTTGCGTATGC+GGG | - | chr3.2:37940084-37940103 | MS.gene46944:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3.2:37940068-37940087 | MS.gene46944:intron | 60.0% |
| !! | GACCATCCAACGCTGGTTCC+AGG | - | chr3.2:37941344-37941363 | MS.gene46944:intron | 60.0% |
| !! | GGCCACACCAGGTTGGTTCT+TGG | - | chr3.2:37941634-37941653 | MS.gene46944:intron | 60.0% |
| ACCAACCTGGTGTGGCCCTG+AGG | + | chr3.2:37941631-37941650 | None:intergenic | 65.0% | |
| ACCAGCCCTGGAACCAGCGT+TGG | + | chr3.2:37941353-37941372 | None:intergenic | 65.0% | |
| CCAACCTGGTGTGGCCCTGA+GGG | + | chr3.2:37941630-37941649 | None:intergenic | 65.0% | |
| CGCATACGCAAGGTCCGGGA+AGG | + | chr3.2:37940085-37940104 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr3.2:37940070-37940089 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAAGGTCC+GGG | + | chr3.2:37940089-37940108 | None:intergenic | 65.0% | |
| GCTCCCGCATACGCAAGGTC+CGG | + | chr3.2:37940090-37940109 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr3.2:37940101-37940120 | MS.gene46944:intron | 65.0% | |
| ! | GCCCTGGAACCAGCGTTGGA+TGG | + | chr3.2:37941349-37941368 | None:intergenic | 65.0% |
| !! | TCCAACGCTGGTTCCAGGGC+TGG | - | chr3.2:37941349-37941368 | MS.gene46944:intron | 65.0% |
| CCCTCAGGGCCACACCAGGT+TGG | - | chr3.2:37941627-37941646 | MS.gene46944:intron | 70.0% | |
| CCTACCCTCAGGGCCACACC+AGG | - | chr3.2:37941623-37941642 | MS.gene46944:intron | 70.0% | |
| CCTGGTGTGGCCCTGAGGGT+AGG | + | chr3.2:37941626-37941645 | None:intergenic | 70.0% | |
| GCCCCTCCTGCCTACCCTCA+GGG | - | chr3.2:37941613-37941632 | MS.gene46944:intron | 70.0% | |
| GCCCTGAGGGTAGGCAGGAG+GGG | + | chr3.2:37941617-37941636 | None:intergenic | 70.0% | |
| GGCCCTGAGGGTAGGCAGGA+GGG | + | chr3.2:37941618-37941637 | None:intergenic | 70.0% | |
| GTGTGGCCCTGAGGGTAGGC+AGG | + | chr3.2:37941622-37941641 | None:intergenic | 70.0% | |
| TGGCCCTGAGGGTAGGCAGG+AGG | + | chr3.2:37941619-37941638 | None:intergenic | 70.0% | |
| CAGGAGGGGCGACTGCCCAG+GGG | + | chr3.2:37941603-37941622 | None:intergenic | 75.0% | |
| CGCCCCTCCTGCCTACCCTC+AGG | - | chr3.2:37941612-37941631 | MS.gene46944:intron | 75.0% | |
| GCAGGAGGGGCGACTGCCCA+GGG | + | chr3.2:37941604-37941623 | None:intergenic | 75.0% | |
| ! | GGCAGGAGGGGCGACTGCCC+AGG | + | chr3.2:37941605-37941624 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 37937989 | 37942823 | 37937989 | ID=MS.gene46944 |
| chr3.2 | mRNA | 37937989 | 37942823 | 37937989 | ID=MS.gene46944.t1;Parent=MS.gene46944 |
| chr3.2 | exon | 37942689 | 37942823 | 37942689 | ID=MS.gene46944.t1.exon1;Parent=MS.gene46944.t1 |
| chr3.2 | CDS | 37942689 | 37942823 | 37942689 | ID=cds.MS.gene46944.t1;Parent=MS.gene46944.t1 |
| chr3.2 | exon | 37942495 | 37942583 | 37942495 | ID=MS.gene46944.t1.exon2;Parent=MS.gene46944.t1 |
| chr3.2 | CDS | 37942495 | 37942583 | 37942495 | ID=cds.MS.gene46944.t1;Parent=MS.gene46944.t1 |
| chr3.2 | exon | 37942271 | 37942409 | 37942271 | ID=MS.gene46944.t1.exon3;Parent=MS.gene46944.t1 |
| chr3.2 | CDS | 37942271 | 37942409 | 37942271 | ID=cds.MS.gene46944.t1;Parent=MS.gene46944.t1 |
| chr3.2 | exon | 37941129 | 37941203 | 37941129 | ID=MS.gene46944.t1.exon4;Parent=MS.gene46944.t1 |
| chr3.2 | CDS | 37941129 | 37941203 | 37941129 | ID=cds.MS.gene46944.t1;Parent=MS.gene46944.t1 |
| chr3.2 | exon | 37940893 | 37941014 | 37940893 | ID=MS.gene46944.t1.exon5;Parent=MS.gene46944.t1 |
| chr3.2 | CDS | 37940893 | 37941014 | 37940893 | ID=cds.MS.gene46944.t1;Parent=MS.gene46944.t1 |
| chr3.2 | exon | 37940540 | 37940615 | 37940540 | ID=MS.gene46944.t1.exon6;Parent=MS.gene46944.t1 |
| chr3.2 | CDS | 37940540 | 37940615 | 37940540 | ID=cds.MS.gene46944.t1;Parent=MS.gene46944.t1 |
| chr3.2 | exon | 37939960 | 37940019 | 37939960 | ID=MS.gene46944.t1.exon7;Parent=MS.gene46944.t1 |
| chr3.2 | CDS | 37939960 | 37940019 | 37939960 | ID=cds.MS.gene46944.t1;Parent=MS.gene46944.t1 |
| chr3.2 | exon | 37937989 | 37938117 | 37937989 | ID=MS.gene46944.t1.exon8;Parent=MS.gene46944.t1 |
| chr3.2 | CDS | 37937989 | 37938117 | 37937989 | ID=cds.MS.gene46944.t1;Parent=MS.gene46944.t1 |
| Gene Sequence |
| Protein sequence |
