AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47865

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47865.t1 MTR_8g088370 95.386 1387 46 3 1 1369 1 1387 0.0 2435
MS.gene47865.t1 MTR_2g030160 70.096 729 209 4 642 1365 124 848 0.0 1054
MS.gene47865.t1 MTR_2g030630 49.472 758 362 9 607 1354 579 1325 0.0 705
MS.gene47865.t1 MTR_4g115710 42.113 710 375 11 656 1354 58 742 2.17e-170 527
MS.gene47865.t1 MTR_4g115710 42.313 709 375 11 656 1354 103 787 1.28e-169 526
MS.gene47865.t1 MTR_4g115710 42.313 709 375 11 656 1354 102 786 1.56e-169 526
MS.gene47865.t1 MTR_4g115710 42.576 660 349 10 700 1354 18 652 2.67e-160 497
MS.gene47865.t1 MTR_4g119910 48.985 394 182 2 587 980 505 879 5.64e-113 377
MS.gene47865.t1 MTR_7g088050 37.143 210 118 4 724 930 39 237 3.35e-31 126
MS.gene47865.t1 MTR_3g090160 35.266 207 126 2 724 930 40 238 4.47e-30 123
MS.gene47865.t1 MTR_7g088050 35.859 198 113 4 724 918 39 225 8.06e-27 110
MS.gene47865.t1 MTR_2g093130 85.417 48 7 0 12 59 37 84 5.71e-19 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47865.t1 AT4G02510 66.186 970 270 14 422 1369 570 1503 0.0 1255
MS.gene47865.t1 AT4G02510 66.186 970 270 14 422 1369 570 1503 0.0 1255
MS.gene47865.t1 AT4G02510 66.186 970 270 14 422 1369 570 1503 0.0 1255
MS.gene47865.t1 AT4G02510 66.186 970 270 14 422 1369 570 1503 0.0 1255
MS.gene47865.t1 AT3G16620 49.409 761 365 7 609 1360 333 1082 0.0 692
MS.gene47865.t1 AT5G20300 39.448 725 395 14 644 1356 80 772 8.49e-150 474
MS.gene47865.t1 AT5G20300 39.448 725 395 14 644 1356 80 772 8.49e-150 474
MS.gene47865.t1 AT5G20300 39.448 725 395 14 644 1356 80 772 8.49e-150 474
MS.gene47865.t1 AT5G20300 39.448 725 395 14 644 1356 80 772 8.49e-150 474
MS.gene47865.t1 AT5G20300 40.364 659 355 12 704 1356 18 644 4.50e-144 454
MS.gene47865.t1 AT5G05000 36.364 209 121 4 724 930 38 236 3.38e-31 125
MS.gene47865.t1 AT5G05000 36.364 209 121 4 724 930 38 236 3.38e-31 125
MS.gene47865.t1 AT5G05000 36.364 209 121 4 724 930 38 236 3.38e-31 125
MS.gene47865.t1 AT1G02280 35.377 212 119 6 724 930 36 234 1.69e-28 117
MS.gene47865.t1 AT1G02280 35.377 212 119 6 724 930 36 234 1.69e-28 117
MS.gene47865.t1 AT4G15810 42.857 147 79 2 653 796 557 701 6.64e-26 116

Find 386 sgRNAs with CRISPR-Local

Find 435 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTAATTGGTTCGTGAAAT+TGG 0.093254 4.4:+12742597 None:intergenic
GAGGTTGTGGGATTGGTTTC+TGG 0.122614 4.4:-12742158 MS.gene47865:CDS
GCTGAGGGAAGAGGTGATTT+TGG 0.140780 4.4:-12740484 MS.gene47865:CDS
TAATTTGGGTTCTGCGGTTT+TGG 0.157682 4.4:-12742219 MS.gene47865:CDS
AACCGTTGAAACCAATAATT+TGG 0.172975 4.4:-12742234 MS.gene47865:CDS
TGAAAATGATATTGGCTTTA+TGG 0.178052 4.4:-12739411 MS.gene47865:CDS
AACCGCAGAACCCAAATTAT+TGG 0.185759 4.4:+12742223 None:intergenic
AACTGTCGAAACTAATAATT+TGG 0.189805 4.4:-12742186 MS.gene47865:CDS
AGGAATTGGAGAAGCAAATT+AGG 0.208017 4.4:-12741038 MS.gene47865:CDS
TGTTGAGCGCCCTGCAGGTT+TGG 0.249020 4.4:-12740809 MS.gene47865:CDS
TCCACATAAAGAACAATATC+AGG 0.260625 4.4:+12740205 None:intergenic
CCGTTAACGGCACCGTTAAT+TGG 0.271517 4.4:+12742584 None:intergenic
TCAATAAATATATTGGTTCT+TGG 0.283200 4.4:-12740457 MS.gene47865:CDS
TGGAGAAATTGCAGGAAATT+AGG 0.283913 4.4:-12740660 MS.gene47865:CDS
CACAGTCGTGGTCCCAACTA+TGG 0.285540 4.4:+12739234 None:intergenic
GACTTCTTAAGAGGCTTAAA+TGG 0.285989 4.4:+12739575 None:intergenic
AAAACTGTTGAAAATGATAT+TGG 0.289647 4.4:-12739419 MS.gene47865:CDS
CTGCGGTTATCAGCTGTTTC+CGG 0.290445 4.4:+12739782 None:intergenic
TGAAGCGGAGGAGGAAGATT+TGG 0.291983 4.4:-12742390 MS.gene47865:CDS
GTTGAGCGCCCTGCAGGTTT+GGG 0.292011 4.4:-12740808 MS.gene47865:CDS
ATTGGTTTCTGGTGATAATT+CGG 0.292409 4.4:-12742147 MS.gene47865:CDS
AGCTTATAGATACCGTTTCT+TGG 0.294793 4.4:-12739297 MS.gene47865:CDS
CTTCTCTTCTACGCTCAAAT+TGG 0.298068 4.4:+12740690 None:intergenic
GCCGCTAAACATGGAGAAAA+TGG 0.300750 4.4:-12739092 MS.gene47865:CDS
GACCGTTAGGAAGCACCTTC+TGG 0.301202 4.4:+12739882 None:intergenic
AGAAATCTGTGACTGGAAAT+TGG 0.308064 4.4:+12738722 None:intergenic
CTTTCTTCACCCTTCTCAAT+AGG 0.309352 4.4:+12741540 None:intergenic
GATGGAGGTGTTGCTGTTGT+GGG 0.313006 4.4:-12742020 MS.gene47865:CDS
CATTCATATCTCTAGTTTGT+AGG 0.315241 4.4:+12740173 None:intergenic
AGAAACTGTGTGTCGGAGTT+TGG 0.324286 4.4:-12741514 MS.gene47865:CDS
ATATTGGTTCTTGGTAAAAC+TGG 0.324385 4.4:-12740448 MS.gene47865:CDS
TTGGTTTCTGGTGATAATTC+GGG 0.326530 4.4:-12742146 MS.gene47865:CDS
GCCTGTACCATTGCCTGATA+TGG 0.327335 4.4:-12739351 MS.gene47865:CDS
GGGGTTGGTGTTGTTGAGAA+TGG 0.327861 4.4:-12742125 MS.gene47865:CDS
GCTTAATAGAGAACAGAAAA+AGG 0.329707 4.4:-12739540 MS.gene47865:CDS
CCCTGATATTGTTCTTTATG+TGG 0.329748 4.4:-12740206 MS.gene47865:CDS
CACTTCCATACTTGCTGTCT+TGG 0.337461 4.4:-12739730 MS.gene47865:CDS
ACGGTGGATTTGACGGCGTC+TGG 0.341340 4.4:+12742485 None:intergenic
GGATGGAGGTGTTGCTGTTG+TGG 0.347219 4.4:-12742021 MS.gene47865:CDS
ACAAGATTTCAGCATTCATT+TGG 0.352065 4.4:-12739126 MS.gene47865:CDS
GATGGTGGCAACACCATATC+AGG 0.357359 4.4:+12739338 None:intergenic
GCTCTTTGATACTGCTACTT+TGG 0.361975 4.4:-12740920 MS.gene47865:CDS
AAGGATGAATCAATGATCTT+TGG 0.362628 4.4:-12741090 MS.gene47865:CDS
TAACAAATACTTGGAGGAAT+TGG 0.363606 4.4:-12741052 MS.gene47865:CDS
AGACTGGCCTTGTCAGCAAC+TGG 0.363939 4.4:+12739264 None:intergenic
TCTCAAGGTGATTCTGCTTA+TGG 0.363951 4.4:-12738852 MS.gene47865:CDS
CCAATTAACGGTGCCGTTAA+CGG 0.365034 4.4:-12742584 MS.gene47865:CDS
GAAATTGGGAAGAAGAAGAT+AGG 0.367274 4.4:+12742612 None:intergenic
GGATTCTGAGGTTGTGGGAT+TGG 0.367318 4.4:-12742165 MS.gene47865:CDS
TCACCACCAACCTTCTCAAT+AGG 0.369141 4.4:+12741915 None:intergenic
GAAAATGATATTGGCTTTAT+GGG 0.369178 4.4:-12739410 MS.gene47865:CDS
TTCTCTGTTGAGCGCCCTGC+AGG 0.369631 4.4:-12740814 MS.gene47865:CDS
CTAGTCTCTGAACCATTCTT+AGG 0.369959 4.4:+12740629 None:intergenic
GCAATCTGTGACTTCTTAAG+AGG 0.372470 4.4:+12739566 None:intergenic
GAATCGGAAGAATAGCAATA+AGG 0.374163 4.4:+12738598 None:intergenic
GCTGATAACCGCAGGCTGTT+TGG 0.374740 4.4:-12739773 MS.gene47865:CDS
CAAGTATTTGTTAGCAGAAT+CGG 0.377266 4.4:+12741062 None:intergenic
GTGCCCTTGGTCCATCGATA+TGG 0.377582 4.4:-12740123 MS.gene47865:CDS
GGGGAACCTGATGGCCCGTC+TGG 0.380179 4.4:+12740058 None:intergenic
TACTCTGCAAGTTAATCCTT+TGG 0.381534 4.4:-12742045 MS.gene47865:CDS
TGATCCATCTTGAGCAGTTA+TGG 0.385303 4.4:+12740843 None:intergenic
TTCAACAACGGTGGATTTGA+CGG 0.385745 4.4:+12742478 None:intergenic
CCACCTTGATCAGCCAGCTT+GGG 0.387628 4.4:+12739686 None:intergenic
GGACTCTTTACAAGAACTTC+TGG 0.388992 4.4:-12738572 MS.gene47865:CDS
TTCCAGTCACAGATTTCTCT+TGG 0.391045 4.4:-12738717 MS.gene47865:CDS
ATCATCAACTTTACCAGGTT+CGG 0.392808 4.4:+12741698 None:intergenic
AAGAGGAGTCTGAACCTTCC+AGG 0.393651 4.4:-12742523 MS.gene47865:CDS
AACAACCAAGACAGCAAGTA+TGG 0.395296 4.4:+12739725 None:intergenic
AACAAATACATCATAACTTA+GGG 0.396759 4.4:+12740036 None:intergenic
CAATTTCACGAACCAATTAA+CGG 0.397684 4.4:-12742596 MS.gene47865:CDS
TCAGCGGTCACTTTCGCAAT+AGG 0.398205 4.4:+12742422 None:intergenic
GAAGACTGATCCTGCCCAAT+TGG 0.401018 4.4:+12738792 None:intergenic
CAACAAATACATCATAACTT+AGG 0.401233 4.4:+12740035 None:intergenic
GTCTTCATTGAGTTTCTCTC+TGG 0.403945 4.4:-12738775 MS.gene47865:CDS
GTTAATTGGTTCGTGAAATT+GGG 0.408998 4.4:+12742598 None:intergenic
TAATTTGGATTCTGAGGTTG+TGG 0.409498 4.4:-12742171 MS.gene47865:CDS
TTGCTATTCTTCCGATTCTC+AGG 0.409754 4.4:-12738593 MS.gene47865:CDS
CGATTCTGCTAACAAATACT+TGG 0.410205 4.4:-12741061 MS.gene47865:CDS
ATCGGAACCGTGACCGTTAA+CGG 0.410655 4.4:+12742571 None:intergenic
CGTAGAAGAGAAGATGAAAC+TGG 0.414331 4.4:-12740680 MS.gene47865:CDS
GGCCTTCATCAACAAATTCC+CGG 0.415837 4.4:-12739180 MS.gene47865:CDS
GGTCACTTTCGCAATAGGTC+TGG 0.416835 4.4:+12742427 None:intergenic
AACAAAACCGTCATCGGAAT+CGG 0.418368 4.4:+12742553 None:intergenic
ATATGCACTGAAGCTGGTCT+TGG 0.420993 4.4:+12740384 None:intergenic
CCCACCTTGATCAGCCAGCT+TGG 0.423133 4.4:+12739685 None:intergenic
ACCGTTGAAACCAATAATTT+GGG 0.425227 4.4:-12742233 MS.gene47865:CDS
ATGCAAAAGAACTCAATAGA+TGG 0.431052 4.4:+12738527 None:intergenic
CAACTATGGGTGTCCAAGAC+TGG 0.431226 4.4:+12739248 None:intergenic
GCGTCTGGATTAACGAGAAT+TGG 0.432077 4.4:+12742500 None:intergenic
TTGGTATTAGTGGGGAGCAC+TGG 0.434068 4.4:-12738885 MS.gene47865:CDS
AATGGAGAGAGGAGTTGAAA+AGG 0.435772 4.4:-12739469 MS.gene47865:CDS
CAGCTGGCATACATTGTTAG+AGG 0.436394 4.4:-12739029 MS.gene47865:CDS
GATGAAACTGGAGAAATTGC+AGG 0.440785 4.4:-12740668 MS.gene47865:CDS
GAAACTGGATTCATCAAACT+TGG 0.440935 4.4:+12739947 None:intergenic
CAGCATTCATTTGGATTCAT+CGG 0.442555 4.4:-12739117 MS.gene47865:CDS
TGGTCGATGGAGTGAAAGTA+AGG 0.446326 4.4:-12740324 MS.gene47865:CDS
CACCCCAAGCTGGCTGATCA+AGG 0.447077 4.4:-12739689 MS.gene47865:CDS
AAAAGAAATAAAACTGCAGC+TGG 0.449835 4.4:-12738984 MS.gene47865:CDS
TTTGTGGAGGCTGATGATAA+GGG 0.451172 4.4:-12742278 MS.gene47865:CDS
CCAATGTCAACAACCTGATC+AGG 0.451436 4.4:+12741606 None:intergenic
GCTGCCTCTGCTCCTCCAGA+CGG 0.454124 4.4:-12740073 MS.gene47865:CDS
TAATGTTGTTGCAGAGGAAG+AGG 0.454429 4.4:-12741361 MS.gene47865:CDS
GTATGGAAGTGGTGGGGAGC+GGG 0.454749 4.4:+12739742 None:intergenic
TCACAGGATGACAGAATTGA+TGG 0.454990 4.4:-12741003 MS.gene47865:CDS
GCTCCTCCAGACGGGCCATC+AGG 0.458532 4.4:-12740064 MS.gene47865:CDS
GCTCTCTTAAAAGCAGCATC+TGG 0.460078 4.4:-12740895 MS.gene47865:CDS
CACGGTTCCGATTCCGATGA+CGG 0.460344 4.4:-12742560 MS.gene47865:CDS
GTTGAGAATGGTGGTGGTGG+TGG 0.460658 4.4:-12742113 MS.gene47865:CDS
AAGACCAGCTTCAGTGCATA+TGG 0.461112 4.4:-12740382 MS.gene47865:CDS
TGTTAACATTGAAAACAGTA+TGG 0.461313 4.4:-12739201 MS.gene47865:CDS
GGTGTTGTTGAGAATGGTGG+TGG 0.461357 4.4:-12742119 MS.gene47865:CDS
GGAATTGGAGAAGCAAATTA+GGG 0.461790 4.4:-12741037 MS.gene47865:CDS
GTTGGTGTTGTTGAGAATGG+TGG 0.462873 4.4:-12742122 MS.gene47865:CDS
TGTTCAACAAACCATTGGTC+AGG 0.463434 4.4:-12739996 MS.gene47865:CDS
AACTAATAATTTGGATTCTG+AGG 0.463869 4.4:-12742177 MS.gene47865:CDS
TGTTGTTGATGAGCCTGATC+AGG 0.465010 4.4:-12741619 MS.gene47865:CDS
CTTGCCGCAGGGAGACAAAC+TGG 0.465205 4.4:-12740556 MS.gene47865:CDS
GCTCCTTCCATGAGTAGAGC+TGG 0.468420 4.4:-12740730 MS.gene47865:CDS
GGGGAAGAAGATGAAGAGAA+TGG 0.468720 4.4:-12739389 MS.gene47865:CDS
CGATCAGTTACTAGTGCCCT+TGG 0.469133 4.4:-12740136 MS.gene47865:CDS
CTTGTCAGCAACTGGGAAGT+TGG 0.470552 4.4:+12739272 None:intergenic
AATCGGAAGAATAGCAATAA+GGG 0.470613 4.4:+12738599 None:intergenic
TGGATTAACGAGAATTGGCC+TGG 0.470788 4.4:+12742505 None:intergenic
GGGGAGTGAAGAGGAAGTTA+AGG 0.470960 4.4:-12742000 MS.gene47865:CDS
CTGTTTCCGGAGTCTTAGAA+AGG 0.471512 4.4:+12739795 None:intergenic
GGCTTTGACATTCAGAACAT+TGG 0.471792 4.4:-12739056 MS.gene47865:CDS
GAACCTGATGGCCCGTCTGG+AGG 0.472080 4.4:+12740061 None:intergenic
CCACCATCATCAACTCCAAC+AGG 0.473263 4.4:+12741798 None:intergenic
CTCTTCCCTCAGCTTCAAGC+CGG 0.475407 4.4:+12740494 None:intergenic
GGTCTCCAACTTTGACCGTT+AGG 0.475697 4.4:+12739869 None:intergenic
GATGAATCAATGATCTTTGG+AGG 0.478488 4.4:-12741087 MS.gene47865:CDS
GTTGACATTGGAGTTGATGA+TGG 0.479083 4.4:-12741594 MS.gene47865:CDS
TGGTGATTCTGATGTTGAAA+TGG 0.481671 4.4:-12739654 MS.gene47865:CDS
CTGCTAAGGAGAGTGCTTCC+CGG 0.482485 4.4:-12740513 MS.gene47865:CDS
GTCACTTTCGCAATAGGTCT+GGG 0.483775 4.4:+12742428 None:intergenic
GTCACGTGCTCACCCCAAGC+TGG 0.483885 4.4:-12739699 MS.gene47865:CDS
GTTGCTGACAAGGCCAGTCT+TGG 0.484648 4.4:-12739261 MS.gene47865:CDS
CTTGAGGATCAACTAGCACT+AGG 0.485002 4.4:-12738915 MS.gene47865:CDS
GCCGCTAACAAAACCGTCAT+CGG 0.485130 4.4:+12742547 None:intergenic
CAAGTTAATCCTTTGGTGGA+TGG 0.485926 4.4:-12742038 MS.gene47865:CDS
AAGAAACGGTATCTATAAGC+TGG 0.488262 4.4:+12739299 None:intergenic
GAAATTGAGAGCCGTGTTGA+TGG 0.489235 4.4:-12741444 MS.gene47865:CDS
GAAAATGGATCGACCATGGC+AGG 0.489462 4.4:-12739077 MS.gene47865:CDS
CACTCTCCTTAGCAGCATCT+AGG 0.490103 4.4:+12740521 None:intergenic
AACGGTGCCGTTAACGGTCA+CGG 0.490123 4.4:-12742578 MS.gene47865:CDS
GTTGTTGAGAATGGTGGTGG+TGG 0.491004 4.4:-12742116 MS.gene47865:CDS
CATAGAGGGTCATGCTGTTG+AGG 0.491125 4.4:-12741469 MS.gene47865:CDS
CTAAGAATGGTTCAGAGACT+AGG 0.491321 4.4:-12740628 MS.gene47865:CDS
AGAGAGCAATGTTGTTGAGG+TGG 0.492950 4.4:-12741403 MS.gene47865:CDS
CGTGTTGTTGAGGTGGAAGA+TGG 0.493337 4.4:-12741252 MS.gene47865:CDS
TATAAGATGGCGGTTCGTGC+GGG 0.493340 4.4:-12738687 MS.gene47865:CDS
TCCAGTCACAGATTTCTCTT+GGG 0.493509 4.4:-12738716 MS.gene47865:CDS
CTATAAGATGGCGGTTCGTG+CGG 0.493688 4.4:-12738688 MS.gene47865:CDS
AGGGAAACGATTGGTATTAG+TGG 0.494090 4.4:-12738895 MS.gene47865:CDS
CATCTGAGTCAGTAACAATC+TGG 0.494135 4.4:+12740980 None:intergenic
GGGAAACGATTGGTATTAGT+GGG 0.496473 4.4:-12738894 MS.gene47865:CDS
TTGTAAAGAGTCCTGAGAAT+CGG 0.496830 4.4:+12738582 None:intergenic
GAGGAGGAAGATTTGGAGAA+AGG 0.499761 4.4:-12742383 MS.gene47865:CDS
CAATGTCACTCAGTTGCTCA+TGG 0.500606 4.4:+12741667 None:intergenic
AGTCTTGGACACCCATAGTT+GGG 0.500781 4.4:-12739246 MS.gene47865:CDS
TGATGAAGTGAAGGAGGATG+AGG 0.501195 4.4:-12742333 MS.gene47865:CDS
ACTGCTGTGACAGAAATTGT+TGG 0.503829 4.4:-12740349 MS.gene47865:CDS
TTTCAGCCTAGATGCTGCTA+AGG 0.504577 4.4:-12740527 MS.gene47865:CDS
TAGGTTCAAAAGTATTATCA+AGG 0.508788 4.4:+12741934 None:intergenic
TTAAAAGCAGCATCTGGAGC+AGG 0.509180 4.4:-12740889 MS.gene47865:CDS
CGGCTTGAAGCTGAGGGAAG+AGG 0.509573 4.4:-12740493 MS.gene47865:CDS
TGGTATTAGTGGGGAGCACT+GGG 0.509804 4.4:-12738884 MS.gene47865:CDS
TGCTTCCCGGCTTGAAGCTG+AGG 0.509960 4.4:-12740500 MS.gene47865:CDS
CTCTTCTTCTTCAACAACGG+TGG 0.510364 4.4:+12742469 None:intergenic
ACTGGGACCGTGCGGTCTCA+AGG 0.510375 4.4:-12738867 MS.gene47865:CDS
CTGCCTCTGCTCCTCCAGAC+GGG 0.510911 4.4:-12740072 MS.gene47865:CDS
ACCCAAATTATTGGTTTCAA+CGG 0.511517 4.4:+12742232 None:intergenic
TGTTGATCGTGTTGTTGAGG+TGG 0.511778 4.4:-12741331 MS.gene47865:CDS
AATGTTGTTGAGGTGGAAGA+TGG 0.512655 4.4:-12741396 MS.gene47865:CDS
ACTTGAACAGTAACTGCTGC+CGG 0.512853 4.4:+12739161 None:intergenic
AAAATGATATTGGCTTTATG+GGG 0.512995 4.4:-12739409 MS.gene47865:CDS
AGTATGGAAGTGGTGGGGAG+CGG 0.513881 4.4:+12739741 None:intergenic
TTCTCTCTGGTGCAGTGGAG+AGG 0.514240 4.4:-12738762 MS.gene47865:CDS
TCAAGGCTCACAACAGGTGC+AGG 0.514540 4.4:+12741951 None:intergenic
TGCCGGGAATTTGTTGATGA+AGG 0.515693 4.4:+12739178 None:intergenic
GGATTGAACAACAAGCTTAG+TGG 0.517238 4.4:-12738666 MS.gene47865:CDS
TTCTGCTAACAAATACTTGG+AGG 0.517595 4.4:-12741058 MS.gene47865:CDS
TTTGAACCTATTGAGAAGGT+TGG 0.518358 4.4:-12741921 MS.gene47865:CDS
ATAGAGGGTCATGCTGTTGA+GGG 0.518500 4.4:-12741468 MS.gene47865:CDS
GTATTATCAAGGCTCACAAC+AGG 0.520140 4.4:+12741945 None:intergenic
TCATCGGTTGCCGCTAAACA+TGG 0.520817 4.4:-12739101 MS.gene47865:CDS
CAACTTCCCAGTTGCTGACA+AGG 0.522547 4.4:-12739271 MS.gene47865:CDS
CTTGTCTGATTCTGATGAAG+AGG 0.523143 4.4:-12739627 MS.gene47865:CDS
GGTGGGGATGCCGAGCCTGT+TGG 0.523560 4.4:-12741813 MS.gene47865:CDS
TATCGGTTTACACTTGCCGC+AGG 0.524213 4.4:-12740568 MS.gene47865:CDS
TCTGCAAGTTAATCCTTTGG+TGG 0.524252 4.4:-12742042 MS.gene47865:CDS
TCTTCCCTCAGCTTCAAGCC+GGG 0.525089 4.4:+12740495 None:intergenic
TAGGATAAAATACCTAAGAA+TGG 0.525172 4.4:-12740641 MS.gene47865:CDS
TCTGGAGCAGGAGGTGAAGA+TGG 0.526867 4.4:-12740877 MS.gene47865:CDS
TGCTTCCTAACGGTCAAAGT+TGG 0.527132 4.4:-12739874 MS.gene47865:CDS
AATGGTACAGGCACAGCAGC+TGG 0.527488 4.4:+12739362 None:intergenic
GACTGGCCTTGTCAGCAACT+GGG 0.528047 4.4:+12739265 None:intergenic
CAATAAGGGCAATCTGAAGT+TGG 0.528569 4.4:+12738613 None:intergenic
TGAGTTTCTCTCTGGTGCAG+TGG 0.529140 4.4:-12738767 MS.gene47865:CDS
GAGGCTTAAATGGTGGGAGC+TGG 0.531290 4.4:+12739585 None:intergenic
ATGAGAGAGATGAAGAAAAG+AGG 0.533410 4.4:-12739446 MS.gene47865:CDS
GACAGCAAGTATGGAAGTGG+TGG 0.534812 4.4:+12739734 None:intergenic
TGAAGAATCAATAGTAGCGC+AGG 0.535072 4.4:-12740596 MS.gene47865:CDS
AACAGTACCAGCTCTACTCA+TGG 0.535090 4.4:+12740723 None:intergenic
TGGTAACCTTTCTAAGACTC+CGG 0.535195 4.4:-12739801 MS.gene47865:CDS
CCTGATCAGGTTGTTGACAT+TGG 0.535921 4.4:-12741606 MS.gene47865:CDS
TTTGAATCGTTTGAGAAGGG+TGG 0.537128 4.4:-12741864 MS.gene47865:CDS
ACCATATCAGGCAATGGTAC+AGG 0.537221 4.4:+12739350 None:intergenic
ATGAAGATTCTCTCAGATGC+TGG 0.537327 4.4:-12739821 MS.gene47865:CDS
AGTAGAGAGCAATGTTGTTG+AGG 0.537645 4.4:-12741406 MS.gene47865:CDS
TGATGAAGATGAAGCGGAGG+AGG 0.538627 4.4:-12742399 MS.gene47865:CDS
TGGATGATGAAGTTGTTGGT+GGG 0.538869 4.4:-12741830 MS.gene47865:CDS
CGTGTTATCGAGGTGGATGA+TGG 0.538893 4.4:-12741180 MS.gene47865:CDS
GGGAAGTTGGTTCCAAGAAA+CGG 0.538972 4.4:+12739285 None:intergenic
AGCTGGATTATCACTATCAA+AGG 0.538985 4.4:+12739316 None:intergenic
AACCAATAATTTGGGTTCTG+CGG 0.539756 4.4:-12742225 MS.gene47865:CDS
CTTTACAAGAACTTCTGGCC+TGG 0.541051 4.4:-12738567 MS.gene47865:CDS
TCTAAGCCTCACTTCAACAT+TGG 0.541559 4.4:+12738827 None:intergenic
GCCCAAGAGAAATCTGTGAC+TGG 0.543244 4.4:+12738715 None:intergenic
ATCATCAACTCCAACAGGCT+CGG 0.543492 4.4:+12741803 None:intergenic
CATATTGTTCAACAAACCAT+TGG 0.543848 4.4:-12740001 MS.gene47865:CDS
CAGTCTTGGACACCCATAGT+TGG 0.544324 4.4:-12739247 MS.gene47865:CDS
AGTGACGGTCCCAAACCTGC+AGG 0.544980 4.4:+12740799 None:intergenic
ACATCATCATCAACTTTACC+AGG 0.545939 4.4:+12741693 None:intergenic
TTCTTAAGAGGCTTAAATGG+TGG 0.546459 4.4:+12739578 None:intergenic
ATGGAGGTGTTGCTGTTGTG+GGG 0.547454 4.4:-12742019 MS.gene47865:CDS
TACTGACTCAGATGAGGAAG+TGG 0.548133 4.4:-12740971 MS.gene47865:CDS
TCAGAACATTGGAAAGCAGC+TGG 0.548424 4.4:-12739045 MS.gene47865:CDS
CTTGAACAGTAACTGCTGCC+GGG 0.548821 4.4:+12739162 None:intergenic
GGGACCATATGCACTGAAGC+TGG 0.550196 4.4:+12740378 None:intergenic
ACTCTCTTCTTCTTCAACAA+CGG 0.554969 4.4:+12742466 None:intergenic
GCTGGTGATGTTGTTGATGA+AGG 0.555921 4.4:-12741735 MS.gene47865:CDS
GGAAGATGAGATAAACATAG+AGG 0.556079 4.4:-12741484 MS.gene47865:CDS
CACCTTGATCAGCCAGCTTG+GGG 0.556564 4.4:+12739687 None:intergenic
CAAATACATCATAACTTAGG+GGG 0.556874 4.4:+12740038 None:intergenic
ATCCTCAAGTTTCACACCGG+TGG 0.557025 4.4:+12738929 None:intergenic
TCTTGGGCGAAGCTATAAGA+TGG 0.557560 4.4:-12738700 MS.gene47865:CDS
GAGCCTGTTGGAGTTGATGA+TGG 0.557752 4.4:-12741801 MS.gene47865:CDS
CGCTTCATCTTCATCATCAG+CGG 0.559020 4.4:+12742406 None:intergenic
ATCACCATAACTGCTCAAGA+TGG 0.559933 4.4:-12740847 MS.gene47865:CDS
TCTTAAGAGGCTTAAATGGT+GGG 0.560636 4.4:+12739579 None:intergenic
GTCTGAAATTGAAGAGGTGG+TGG 0.560795 4.4:-12741976 MS.gene47865:CDS
AATGCAGAAGATTTCAAACC+TGG 0.560811 4.4:+12740289 None:intergenic
CAAGACAGCAAGTATGGAAG+TGG 0.561967 4.4:+12739731 None:intergenic
CCGTGTTGATGGTGCTGTTG+AGG 0.562143 4.4:-12741433 MS.gene47865:CDS
GGTTCTTGGTAAAACTGGCG+TGG 0.564354 4.4:-12740443 MS.gene47865:CDS
TAACTGCTCAAGATGGATCA+AGG 0.564949 4.4:-12740840 MS.gene47865:CDS
CCACATAAAGAACAATATCA+GGG 0.567206 4.4:+12740206 None:intergenic
ATCACATTTCGCCATATCGA+TGG 0.567460 4.4:+12740112 None:intergenic
GTTCTTGGTAAAACTGGCGT+GGG 0.567530 4.4:-12740442 MS.gene47865:CDS
ACAGTCGTGGTCCCAACTAT+GGG 0.568490 4.4:+12739235 None:intergenic
GTGGATGATGAAGTTGTTGG+TGG 0.569430 4.4:-12741831 MS.gene47865:CDS
CCATGTTGATAATGCTGCTG+AGG 0.569769 4.4:-12741226 MS.gene47865:CDS
ATTGAGAAGGTTGGTGGTGA+AGG 0.571261 4.4:-12741912 MS.gene47865:CDS
GAGGAAGATTTGGAGAAAGG+CGG 0.572026 4.4:-12742380 MS.gene47865:CDS
TTAACGAGAATTGGCCTGGA+AGG 0.572245 4.4:+12742509 None:intergenic
ACTAGTAACTGATCGCAACA+TGG 0.573506 4.4:+12740144 None:intergenic
GCAGAAGAAGCAATGGAGAG+AGG 0.575960 4.4:-12739480 MS.gene47865:CDS
AATTTGGATTCTGAGGTTGT+GGG 0.576672 4.4:-12742170 MS.gene47865:CDS
GGACGGTTTGACCGTACCGC+AGG 0.577122 4.4:+12740763 None:intergenic
AACTGTGTGTCGGAGTTTGG+AGG 0.578211 4.4:-12741511 MS.gene47865:CDS
GTTAATCCTTTGGTGGATGG+AGG 0.578638 4.4:-12742035 MS.gene47865:CDS
GAACCTATTGAGAAGGTTGG+TGG 0.578878 4.4:-12741918 MS.gene47865:CDS
TTCTGTCACAGCAGTAGTAG+CGG 0.578904 4.4:+12740357 None:intergenic
TTGGGTGAAAATGTGTCCAC+CGG 0.579123 4.4:-12738945 MS.gene47865:CDS
GAAATTGTTGGAATGGTCGA+TGG 0.580131 4.4:-12740337 MS.gene47865:CDS
GGTTTACCTGTCTGAAGTGA+CGG 0.583685 4.4:+12740784 None:intergenic
TGAGGCGAATGATGGGAATG+AGG 0.584902 4.4:-12742303 MS.gene47865:CDS
AAATTGGGAAGAAGAAGATA+GGG 0.585409 4.4:+12742613 None:intergenic
GGCCAGAAGGTGCTTCCTAA+CGG 0.586444 4.4:-12739884 MS.gene47865:CDS
TTGGGACCGTCACTTCAGAC+AGG 0.587018 4.4:-12740790 MS.gene47865:CDS
CAATGTTGACCGTGTTGTTG+AGG 0.587716 4.4:-12741262 MS.gene47865:CDS
GTGTCGGAGTTTGGAGGCTG+AGG 0.588130 4.4:-12741505 MS.gene47865:CDS
AATGTCACTCAGTTGCTCAT+GGG 0.588966 4.4:+12741668 None:intergenic
TGGTTTCTGGTGATAATTCG+GGG 0.589268 4.4:-12742145 MS.gene47865:CDS
TGGAGAGGTGATTTAGCCGT+GGG 0.589597 4.4:-12738747 MS.gene47865:CDS
TCTTCTGCAAAAGTTTCACT+CGG 0.593386 4.4:+12739495 None:intergenic
TGACAGAGAGATTGATGACT+CGG 0.593565 4.4:-12741124 MS.gene47865:CDS
TGTTGACCGTGTTGTTGAGG+TGG 0.593565 4.4:-12741259 MS.gene47865:CDS
TGATGATGAAGGAGATAACA+AGG 0.593844 4.4:-12740944 MS.gene47865:CDS
CGCTGATGATGAAGATGAAG+CGG 0.595322 4.4:-12742405 MS.gene47865:CDS
ACAGCAAGTATGGAAGTGGT+GGG 0.596921 4.4:+12739735 None:intergenic
TTGAAAACCATCCTTCATGT+CGG 0.597046 4.4:-12739919 MS.gene47865:CDS
GGATGATGAAGTTGTTGGTG+GGG 0.597501 4.4:-12741829 MS.gene47865:CDS
CCTCAGCAGCATTATCAACA+TGG 0.600830 4.4:+12741226 None:intergenic
ACATCACCAGCCTTCTCAGT+AGG 0.601051 4.4:+12741642 None:intergenic
ACATCACCAGCCTTCTCAGT+AGG 0.601051 4.4:+12741747 None:intergenic
TCTGTCACAGCAGTAGTAGC+GGG 0.601394 4.4:+12740358 None:intergenic
TGACTCGGTGTCGGATACGA+AGG 0.603266 4.4:-12741109 MS.gene47865:CDS
AGAGATTGATGACTCGGTGT+CGG 0.603849 4.4:-12741118 MS.gene47865:CDS
TAGGGCAAGTGAGAGTTCAC+AGG 0.605640 4.4:-12741019 MS.gene47865:CDS
TCGCCATATCGATGGACCAA+GGG 0.608631 4.4:+12740120 None:intergenic
CGGAAACAGCTGATAACCGC+AGG 0.608972 4.4:-12739781 MS.gene47865:CDS
GTTGTTGTAGATGCCGAACC+TGG 0.609077 4.4:-12741711 MS.gene47865:CDS
TGACATTGCTCCTACTGAGA+AGG 0.609392 4.4:-12741757 MS.gene47865:CDS
CCATGTTGATAGTGCTGTTG+AGG 0.609581 4.4:-12741298 MS.gene47865:CDS
GTGTTGTTGAGGTGGAAGAT+GGG 0.609701 4.4:-12741251 MS.gene47865:CDS
CCAAGCTGGCTGATCAAGGT+GGG 0.610655 4.4:-12739685 MS.gene47865:CDS
TTGAGGATCAACTAGCACTA+GGG 0.610714 4.4:-12738914 MS.gene47865:CDS
AAATGATATTGGCTTTATGG+GGG 0.610721 4.4:-12739408 MS.gene47865:CDS
GAAGATGAGATAAACATAGA+GGG 0.611116 4.4:-12741483 MS.gene47865:CDS
GTGGAGAGGTGATTTAGCCG+TGG 0.611173 4.4:-12738748 MS.gene47865:CDS
TGGCCCGTCTGGAGGAGCAG+AGG 0.611347 4.4:+12740069 None:intergenic
GCAGGAGGTGAAGATGGCGG+CGG 0.612314 4.4:-12740871 MS.gene47865:CDS
GACGTTGCTCCTATTGAGAA+GGG 0.612939 4.4:-12741549 MS.gene47865:CDS
TTCTGAAACCAAACAGCCTG+CGG 0.613630 4.4:+12739765 None:intergenic
ATCGGTTTACACTTGCCGCA+GGG 0.614527 4.4:-12740567 MS.gene47865:CDS
TAATGTTGATCGTGTTGTTG+AGG 0.614837 4.4:-12741334 MS.gene47865:CDS
GCTTCCCGGCTTGAAGCTGA+GGG 0.615769 4.4:-12740499 MS.gene47865:CDS
CCTCAACAGCACTATCAACA+TGG 0.616941 4.4:+12741298 None:intergenic
AGAGAGATGAAGAAAAGAGG+AGG 0.618029 4.4:-12739443 MS.gene47865:CDS
ATGTTGTTGAGGTGGAAGAT+GGG 0.618228 4.4:-12741395 MS.gene47865:CDS
TGTTGATAATGCTGCTGAGG+GGG 0.620217 4.4:-12741223 MS.gene47865:CDS
TCTGATTCTGATGAAGAGGA+AGG 0.620368 4.4:-12739623 MS.gene47865:CDS
GTCGTGGATGATGAAGTTGT+TGG 0.621002 4.4:-12741834 MS.gene47865:CDS
CAAACCATTGGTCAGGCTGT+CGG 0.621879 4.4:-12739989 MS.gene47865:CDS
GGATGATGGCAGCCATGTTG+AGG 0.622748 4.4:-12741166 MS.gene47865:CDS
ACAAATACATCATAACTTAG+GGG 0.623164 4.4:+12740037 None:intergenic
TGTTGAAGTGAGGCTTAGAG+AGG 0.624868 4.4:-12738823 MS.gene47865:CDS
GGATTATCACTATCAAAGGA+TGG 0.626731 4.4:+12739320 None:intergenic
CTGAATGTCAAAGCCTGCCA+TGG 0.627077 4.4:+12739064 None:intergenic
TGACGTTGCTCCTATTGAGA+AGG 0.627109 4.4:-12741550 MS.gene47865:CDS
TGCTGTTGTGGGGAGTGAAG+AGG 0.628599 4.4:-12742009 MS.gene47865:CDS
GTACCAGCTCTACTCATGGA+AGG 0.629891 4.4:+12740727 None:intergenic
GAAGGGTGGTGAAGATGTCG+TGG 0.629978 4.4:-12741850 MS.gene47865:CDS
TGATGATGAAGATGAAGCGG+AGG 0.631044 4.4:-12742402 MS.gene47865:CDS
TAAGGTGTCTGAAATTGAAG+AGG 0.631755 4.4:-12741982 MS.gene47865:CDS
TGTTGATAATGTTGTTGCAG+AGG 0.631856 4.4:-12741367 MS.gene47865:CDS
GATGAGAAGTATACAAGTGG+TGG 0.631952 4.4:-12742083 MS.gene47865:CDS
TGTTGATGGTGCTGTTGAGG+AGG 0.632534 4.4:-12741430 MS.gene47865:CDS
AAAGTTCAGAAACTGTGTGT+CGG 0.633345 4.4:-12741521 MS.gene47865:CDS
GATCAACAGCAGCCTCAACA+TGG 0.634475 4.4:+12741154 None:intergenic
GTGACGGTCCCAAACCTGCA+GGG 0.634776 4.4:+12740800 None:intergenic
ACTAGCACTAGGGAAACGAT+TGG 0.635341 4.4:-12738904 MS.gene47865:CDS
TGACTGGAAATTGGCTCCCA+CGG 0.635705 4.4:+12738731 None:intergenic
TGTGACAGAAATTGTTGGAA+TGG 0.635748 4.4:-12740344 MS.gene47865:CDS
CCCAAGCTGGCTGATCAAGG+TGG 0.635876 4.4:-12739686 MS.gene47865:CDS
CTAGTAACTGATCGCAACAT+GGG 0.636229 4.4:+12740145 None:intergenic
ATTGCTCCTACTGAGAAGGC+TGG 0.637177 4.4:-12741753 MS.gene47865:CDS
TGGAGAAAATGGATCGACCA+TGG 0.637199 4.4:-12739081 MS.gene47865:CDS
ATGGAGCCAATGTTGAAGTG+AGG 0.641534 4.4:-12738833 MS.gene47865:CDS
AAAGCAGCATCTGGAGCAGG+AGG 0.641990 4.4:-12740886 MS.gene47865:CDS
ATTGTTCCTACTGAGAAGGC+TGG 0.642186 4.4:-12741648 MS.gene47865:CDS
TTCGCCATATCGATGGACCA+AGG 0.642512 4.4:+12740119 None:intergenic
CATGTTGATAATGCTGCTGA+GGG 0.642954 4.4:-12741225 MS.gene47865:CDS
AGACAGGTAAACCTGCGGTA+CGG 0.644441 4.4:-12740774 MS.gene47865:CDS
CAATGTTGATCGTGTTATCG+AGG 0.647207 4.4:-12741190 MS.gene47865:CDS
GGCAACACCATATCAGGCAA+TGG 0.647656 4.4:+12739344 None:intergenic
CACATAAAGAACAATATCAG+GGG 0.649107 4.4:+12740207 None:intergenic
TGACATTGTTCCTACTGAGA+AGG 0.649374 4.4:-12741652 MS.gene47865:CDS
TGTTGATAGTGCTGTTGAGG+AGG 0.651431 4.4:-12741295 MS.gene47865:CDS
CACCGTCGTAACCACAGTCG+TGG 0.652954 4.4:+12739222 None:intergenic
GTCACCGACAGCCTGACCAA+TGG 0.653116 4.4:+12739985 None:intergenic
CATCTTCCACCTCAACAACA+CGG 0.654368 4.4:+12741253 None:intergenic
GGTTTCTGGTGATAATTCGG+GGG 0.654796 4.4:-12742144 MS.gene47865:CDS
GTAAGGGTCATTGACACACC+AGG 0.655565 4.4:-12740307 MS.gene47865:CDS
TGGGGAGCACTGGGACCGTG+CGG 0.658055 4.4:-12738875 MS.gene47865:CDS
GGTGTCTGAAATTGAAGAGG+TGG 0.658334 4.4:-12741979 MS.gene47865:CDS
GGAGCAGGAGGTGAAGATGG+CGG 0.659478 4.4:-12740874 MS.gene47865:CDS
AAATACATCATAACTTAGGG+GGG 0.659737 4.4:+12740039 None:intergenic
GCAACACCTCCATCCACCAA+AGG 0.662995 4.4:+12742029 None:intergenic
GATTGTTACTGACTCAGATG+AGG 0.669201 4.4:-12740977 MS.gene47865:CDS
GAGTATTTATCACTAGCACC+AGG 0.670135 4.4:+12738549 None:intergenic
AGAATCACCTTGAGACCGCA+CGG 0.671150 4.4:+12738860 None:intergenic
CCTGTTGGAGTTGATGATGG+TGG 0.672362 4.4:-12741798 MS.gene47865:CDS
TTGATCCTCAAGTTTCACAC+CGG 0.673527 4.4:+12738926 None:intergenic
CATAGTTGGGACCACGACTG+TGG 0.676979 4.4:-12739233 MS.gene47865:CDS
TTCACCAGTTTGTCTCCCTG+CGG 0.676981 4.4:+12740552 None:intergenic
GGTCGATGGAGTGAAAGTAA+GGG 0.678846 4.4:-12740323 MS.gene47865:CDS
GAAGTGGAATCTGATGATGA+AGG 0.682384 4.4:-12740955 MS.gene47865:CDS
GGTGATGAGAAGTATACAAG+TGG 0.684748 4.4:-12742086 MS.gene47865:CDS
ACATAAAGAACAATATCAGG+GGG 0.685746 4.4:+12740208 None:intergenic
TTATCACTATCAAAGGATGG+TGG 0.688130 4.4:+12739323 None:intergenic
TGTTGATCGTGTTATCGAGG+TGG 0.692219 4.4:-12741187 MS.gene47865:CDS
CCTCAACAGCACCATCAACA+CGG 0.698482 4.4:+12741433 None:intergenic
TGGGCGAAGCTATAAGATGG+CGG 0.700030 4.4:-12738697 MS.gene47865:CDS
GTCCACCGGTGTGAAACTTG+AGG 0.703598 4.4:-12738931 MS.gene47865:CDS
CAGCAAGTATGGAAGTGGTG+GGG 0.704024 4.4:+12739736 None:intergenic
GACCACGACTGTGGTTACGA+CGG 0.705529 4.4:-12739224 MS.gene47865:CDS
GATCAAGGTGGGATTGACAA+TGG 0.709070 4.4:-12739674 MS.gene47865:CDS
TAACACAAAAGCAATAACAG+AGG 0.713189 4.4:+12739848 None:intergenic
GGAAACGATTGGTATTAGTG+GGG 0.717259 4.4:-12738893 MS.gene47865:CDS
AACTTGGATTCATAAGACGT+AGG 0.732872 4.4:+12739963 None:intergenic
ACTTCAGACAGGTAAACCTG+CGG 0.749194 4.4:-12740779 MS.gene47865:CDS
ATGTTGATAATGCTGCTGAG+GGG 0.768342 4.4:-12741224 MS.gene47865:CDS
TTAGTGGACAGATCACTGTG+AGG 0.792931 4.4:-12738650 MS.gene47865:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTTTGAAATTTTTGAATT+TGG + chr4.4:12742167-12742186 None:intergenic 15.0%
!!! TGGATTTTCAATAAATATAT+TGG - chr4.4:12740701-12740720 MS.gene47865:CDS 15.0%
!! AAAACTGTTGAAAATGATAT+TGG - chr4.4:12741746-12741765 MS.gene47865:CDS 20.0%
!! AACAAATACATCATAACTTA+GGG + chr4.4:12741132-12741151 None:intergenic 20.0%
!!! TCAATAAATATATTGGTTCT+TGG - chr4.4:12740708-12740727 MS.gene47865:CDS 20.0%
! AACTAATAATTTGGATTCTG+AGG - chr4.4:12738988-12739007 MS.gene47865:CDS 25.0%
! AACTGTCGAAACTAATAATT+TGG - chr4.4:12738979-12738998 MS.gene47865:CDS 25.0%
! ACAAATACATCATAACTTAG+GGG + chr4.4:12741131-12741150 None:intergenic 25.0%
! CAACAAATACATCATAACTT+AGG + chr4.4:12741133-12741152 None:intergenic 25.0%
! TAGGATAAAATACCTAAGAA+TGG - chr4.4:12740524-12740543 MS.gene47865:CDS 25.0%
! TGTTAACATTGAAAACAGTA+TGG - chr4.4:12741964-12741983 MS.gene47865:CDS 25.0%
!! GCTACGATAAATTCAATTTT+TGG - chr4.4:12740753-12740772 MS.gene47865:CDS 25.0%
!!! AAAATGATATTGGCTTTATG+GGG - chr4.4:12741756-12741775 MS.gene47865:CDS 25.0%
!!! AAATTTTGTTGATGAAGTGA+AGG - chr4.4:12738823-12738842 MS.gene47865:CDS 25.0%
!!! GAAAATGATATTGGCTTTAT+GGG - chr4.4:12741755-12741774 MS.gene47865:CDS 25.0%
!!! TAGGTTCAAAAGTATTATCA+AGG + chr4.4:12739234-12739253 None:intergenic 25.0%
!!! TGAAAATGATATTGGCTTTA+TGG - chr4.4:12741754-12741773 MS.gene47865:CDS 25.0%
AAAAGAAATAAAACTGCAGC+TGG - chr4.4:12742181-12742200 MS.gene47865:CDS 30.0%
AAATACATCATAACTTAGGG+GGG + chr4.4:12741129-12741148 None:intergenic 30.0%
AAATTGGGAAGAAGAAGATA+GGG + chr4.4:12738555-12738574 None:intergenic 30.0%
AACCGTTGAAACCAATAATT+TGG - chr4.4:12738931-12738950 MS.gene47865:CDS 30.0%
AAGGATGAATCAATGATCTT+TGG - chr4.4:12740075-12740094 MS.gene47865:CDS 30.0%
AATCGGAAGAATAGCAATAA+GGG + chr4.4:12742569-12742588 None:intergenic 30.0%
ACAAGATTTCAGCATTCATT+TGG - chr4.4:12742039-12742058 MS.gene47865:CDS 30.0%
ACATAAAGAACAATATCAGG+GGG + chr4.4:12740960-12740979 None:intergenic 30.0%
ACCGTTGAAACCAATAATTT+GGG - chr4.4:12738932-12738951 MS.gene47865:CDS 30.0%
CAAATACATCATAACTTAGG+GGG + chr4.4:12741130-12741149 None:intergenic 30.0%
CAATTTCACGAACCAATTAA+CGG - chr4.4:12738569-12738588 MS.gene47865:CDS 30.0%
CACATAAAGAACAATATCAG+GGG + chr4.4:12740961-12740980 None:intergenic 30.0%
CATATTGTTCAACAAACCAT+TGG - chr4.4:12741164-12741183 MS.gene47865:CDS 30.0%
CCACATAAAGAACAATATCA+GGG + chr4.4:12740962-12740981 None:intergenic 30.0%
GAAGATGAGATAAACATAGA+GGG - chr4.4:12739682-12739701 MS.gene47865:CDS 30.0%
GCTTAATAGAGAACAGAAAA+AGG - chr4.4:12741625-12741644 MS.gene47865:CDS 30.0%
TAACAAATACTTGGAGGAAT+TGG - chr4.4:12740113-12740132 MS.gene47865:CDS 30.0%
TAACACAAAAGCAATAACAG+AGG + chr4.4:12741320-12741339 None:intergenic 30.0%
TCCACATAAAGAACAATATC+AGG + chr4.4:12740963-12740982 None:intergenic 30.0%
! CAAGTATTTGTTAGCAGAAT+CGG + chr4.4:12740106-12740125 None:intergenic 30.0%
! CATTCATATCTCTAGTTTGT+AGG + chr4.4:12740995-12741014 None:intergenic 30.0%
! TACTTTTGAACCTATTGAGA+AGG - chr4.4:12739240-12739259 MS.gene47865:CDS 30.0%
!! AAATGATATTGGCTTTATGG+GGG - chr4.4:12741757-12741776 MS.gene47865:CDS 30.0%
!! ACCCAAATTATTGGTTTCAA+CGG + chr4.4:12738936-12738955 None:intergenic 30.0%
!! ATATTGGTTCTTGGTAAAAC+TGG - chr4.4:12740717-12740736 MS.gene47865:CDS 30.0%
!! ATTGGTTTCTGGTGATAATT+CGG - chr4.4:12739018-12739037 MS.gene47865:CDS 30.0%
!! GTTAATTGGTTCGTGAAATT+GGG + chr4.4:12738570-12738589 None:intergenic 30.0%
!!! AGTTTTGAATCGTTTGAGAA+GGG - chr4.4:12739298-12739317 MS.gene47865:CDS 30.0%
!!! TAGTTTTGAATCGTTTGAGA+AGG - chr4.4:12739297-12739316 MS.gene47865:CDS 30.0%
AAAGTTCAGAAACTGTGTGT+CGG - chr4.4:12739644-12739663 MS.gene47865:CDS 35.0%
AACTTGGATTCATAAGACGT+AGG + chr4.4:12741205-12741224 None:intergenic 35.0%
AAGAAACGGTATCTATAAGC+TGG + chr4.4:12741869-12741888 None:intergenic 35.0%
AATGCAGAAGATTTCAAACC+TGG + chr4.4:12740879-12740898 None:intergenic 35.0%
ACATCATCATCAACTTTACC+AGG + chr4.4:12739475-12739494 None:intergenic 35.0%
ACTCTCTTCTTCTTCAACAA+CGG + chr4.4:12738702-12738721 None:intergenic 35.0%
AGAAATCTGTGACTGGAAAT+TGG + chr4.4:12742446-12742465 None:intergenic 35.0%
AGCTGGATTATCACTATCAA+AGG + chr4.4:12741852-12741871 None:intergenic 35.0%
AGCTTATAGATACCGTTTCT+TGG - chr4.4:12741868-12741887 MS.gene47865:CDS 35.0%
AGGAATTGGAGAAGCAAATT+AGG - chr4.4:12740127-12740146 MS.gene47865:CDS 35.0%
ATCATCAACTTTACCAGGTT+CGG + chr4.4:12739470-12739489 None:intergenic 35.0%
ATGAGAGAGATGAAGAAAAG+AGG - chr4.4:12741719-12741738 MS.gene47865:CDS 35.0%
ATGGAAGGAGCAAAAAGATT+GGG + chr4.4:12740426-12740445 None:intergenic 35.0%
CAGCATTCATTTGGATTCAT+CGG - chr4.4:12742048-12742067 MS.gene47865:CDS 35.0%
CCCTGATATTGTTCTTTATG+TGG - chr4.4:12740959-12740978 MS.gene47865:CDS 35.0%
CGATTCTGCTAACAAATACT+TGG - chr4.4:12740104-12740123 MS.gene47865:CDS 35.0%
GAAACTGGATTCATCAAACT+TGG + chr4.4:12741221-12741240 None:intergenic 35.0%
GAAATTGGGAAGAAGAAGAT+AGG + chr4.4:12738556-12738575 None:intergenic 35.0%
GAATCGGAAGAATAGCAATA+AGG + chr4.4:12742570-12742589 None:intergenic 35.0%
GACTTCTTAAGAGGCTTAAA+TGG + chr4.4:12741593-12741612 None:intergenic 35.0%
GATGAATCAATGATCTTTGG+AGG - chr4.4:12740078-12740097 MS.gene47865:CDS 35.0%
GGAAGATGAGATAAACATAG+AGG - chr4.4:12739681-12739700 MS.gene47865:CDS 35.0%
GGAATTGGAGAAGCAAATTA+GGG - chr4.4:12740128-12740147 MS.gene47865:CDS 35.0%
GGATTATCACTATCAAAGGA+TGG + chr4.4:12741848-12741867 None:intergenic 35.0%
TACTCTGCAAGTTAATCCTT+TGG - chr4.4:12739120-12739139 MS.gene47865:CDS 35.0%
TCTTAAGAGGCTTAAATGGT+GGG + chr4.4:12741589-12741608 None:intergenic 35.0%
TCTTCTGCAAAAGTTTCACT+CGG + chr4.4:12741673-12741692 None:intergenic 35.0%
TGGAGAAATTGCAGGAAATT+AGG - chr4.4:12740505-12740524 MS.gene47865:CDS 35.0%
TGGTGATTCTGATGTTGAAA+TGG - chr4.4:12741511-12741530 MS.gene47865:CDS 35.0%
TGTGACAGAAATTGTTGGAA+TGG - chr4.4:12740821-12740840 MS.gene47865:CDS 35.0%
TTATCACTATCAAAGGATGG+TGG + chr4.4:12741845-12741864 None:intergenic 35.0%
TTCTGCTAACAAATACTTGG+AGG - chr4.4:12740107-12740126 MS.gene47865:CDS 35.0%
TTCTTAAGAGGCTTAAATGG+TGG + chr4.4:12741590-12741609 None:intergenic 35.0%
TTGAAAACCATCCTTCATGT+CGG - chr4.4:12741246-12741265 MS.gene47865:CDS 35.0%
TTGTAAAGAGTCCTGAGAAT+CGG + chr4.4:12742586-12742605 None:intergenic 35.0%
TTTGAACCTATTGAGAAGGT+TGG - chr4.4:12739244-12739263 MS.gene47865:CDS 35.0%
! AACCAATAATTTGGGTTCTG+CGG - chr4.4:12738940-12738959 MS.gene47865:CDS 35.0%
! AACTTTTGCAGAAGAAGCAA+TGG - chr4.4:12741678-12741697 MS.gene47865:CDS 35.0%
! AATATCAGGGGGAGAATTTT+TGG + chr4.4:12740949-12740968 None:intergenic 35.0%
! ACAGAAAAAGGCATATCTTG+AGG - chr4.4:12741637-12741656 MS.gene47865:CDS 35.0%
! TAAGGTGTCTGAAATTGAAG+AGG - chr4.4:12739183-12739202 MS.gene47865:CDS 35.0%
! TAATGTTGATCGTGTTGTTG+AGG - chr4.4:12739831-12739850 MS.gene47865:CDS 35.0%
! TCCATTTTCTCCATGTTTAG+CGG + chr4.4:12742077-12742096 None:intergenic 35.0%
! TGATGATGAAGGAGATAACA+AGG - chr4.4:12740221-12740240 MS.gene47865:CDS 35.0%
! TGGTTTTCAACAAGAGAAAC+TGG + chr4.4:12741236-12741255 None:intergenic 35.0%
! TTTTTGTTGAGGCGAATGAT+GGG - chr4.4:12738855-12738874 MS.gene47865:CDS 35.0%
!! AATTTGGATTCTGAGGTTGT+GGG - chr4.4:12738995-12739014 MS.gene47865:CDS 35.0%
!! CGTTAATTGGTTCGTGAAAT+TGG + chr4.4:12738571-12738590 None:intergenic 35.0%
!! GGAGTATCTGTGACATTTTT+GGG - chr4.4:12742202-12742221 MS.gene47865:CDS 35.0%
!! TAATTTGGATTCTGAGGTTG+TGG - chr4.4:12738994-12739013 MS.gene47865:CDS 35.0%
!! TGGAGTATCTGTGACATTTT+TGG - chr4.4:12742201-12742220 MS.gene47865:CDS 35.0%
!! TGTTGATAATGTTGTTGCAG+AGG - chr4.4:12739798-12739817 MS.gene47865:CDS 35.0%
!! TTGGTTTCTGGTGATAATTC+GGG - chr4.4:12739019-12739038 MS.gene47865:CDS 35.0%
!! TTTTGTTGATGAAGTGAAGG+AGG - chr4.4:12738826-12738845 MS.gene47865:CDS 35.0%
AACAAAACCGTCATCGGAAT+CGG + chr4.4:12738615-12738634 None:intergenic 40.0%
AACAACCAAGACAGCAAGTA+TGG + chr4.4:12741443-12741462 None:intergenic 40.0%
AACCGCAGAACCCAAATTAT+TGG + chr4.4:12738945-12738964 None:intergenic 40.0%
AAGGAGCAAAAAGATTGGGA+CGG + chr4.4:12740422-12740441 None:intergenic 40.0%
AATGGAGAGAGGAGTTGAAA+AGG - chr4.4:12741696-12741715 MS.gene47865:CDS 40.0%
AATGTCACTCAGTTGCTCAT+GGG + chr4.4:12739500-12739519 None:intergenic 40.0%
AATGTTGTTGAGGTGGAAGA+TGG - chr4.4:12739769-12739788 MS.gene47865:CDS 40.0%
ACTAGTAACTGATCGCAACA+TGG + chr4.4:12741024-12741043 None:intergenic 40.0%
ACTGCTGTGACAGAAATTGT+TGG - chr4.4:12740816-12740835 MS.gene47865:CDS 40.0%
AGAGAGATGAAGAAAAGAGG+AGG - chr4.4:12741722-12741741 MS.gene47865:CDS 40.0%
AGGGAAACGATTGGTATTAG+TGG - chr4.4:12742270-12742289 MS.gene47865:CDS 40.0%
AGTAGAGAGCAATGTTGTTG+AGG - chr4.4:12739759-12739778 MS.gene47865:CDS 40.0%
ATCACATTTCGCCATATCGA+TGG + chr4.4:12741056-12741075 None:intergenic 40.0%
ATCACCATAACTGCTCAAGA+TGG - chr4.4:12740318-12740337 MS.gene47865:CDS 40.0%
ATCCTTCATGTCGGAAAAAC+AGG - chr4.4:12741255-12741274 MS.gene47865:CDS 40.0%
ATGAAGATTCTCTCAGATGC+TGG - chr4.4:12741344-12741363 MS.gene47865:CDS 40.0%
ATGTTGTTGAGGTGGAAGAT+GGG - chr4.4:12739770-12739789 MS.gene47865:CDS 40.0%
CAAGTTAATCCTTTGGTGGA+TGG - chr4.4:12739127-12739146 MS.gene47865:CDS 40.0%
CAATGTTGATCGTGTTATCG+AGG - chr4.4:12739975-12739994 MS.gene47865:CDS 40.0%
CATCTGAGTCAGTAACAATC+TGG + chr4.4:12740188-12740207 None:intergenic 40.0%
CATGGAAGGAGCAAAAAGAT+TGG + chr4.4:12740427-12740446 None:intergenic 40.0%
CGTAGAAGAGAAGATGAAAC+TGG - chr4.4:12740485-12740504 MS.gene47865:CDS 40.0%
CTAAGAATGGTTCAGAGACT+AGG - chr4.4:12740537-12740556 MS.gene47865:CDS 40.0%
CTAGTAACTGATCGCAACAT+GGG + chr4.4:12741023-12741042 None:intergenic 40.0%
CTAGTCTCTGAACCATTCTT+AGG + chr4.4:12740539-12740558 None:intergenic 40.0%
CTTCTCTTCTACGCTCAAAT+TGG + chr4.4:12740478-12740497 None:intergenic 40.0%
CTTGTCTGATTCTGATGAAG+AGG - chr4.4:12741538-12741557 MS.gene47865:CDS 40.0%
CTTTCTTCACCCTTCTCAAT+AGG + chr4.4:12739628-12739647 None:intergenic 40.0%
GAAATTGTTGGAATGGTCGA+TGG - chr4.4:12740828-12740847 MS.gene47865:CDS 40.0%
GAGTATTTATCACTAGCACC+AGG + chr4.4:12742619-12742638 None:intergenic 40.0%
GATGAAACTGGAGAAATTGC+AGG - chr4.4:12740497-12740516 MS.gene47865:CDS 40.0%
GCAATCTGTGACTTCTTAAG+AGG + chr4.4:12741602-12741621 None:intergenic 40.0%
GGAAACGATTGGTATTAGTG+GGG - chr4.4:12742272-12742291 MS.gene47865:CDS 40.0%
GGACTCTTTACAAGAACTTC+TGG - chr4.4:12742593-12742612 MS.gene47865:CDS 40.0%
GGATTGAACAACAAGCTTAG+TGG - chr4.4:12742499-12742518 MS.gene47865:CDS 40.0%
GGGAAACGATTGGTATTAGT+GGG - chr4.4:12742271-12742290 MS.gene47865:CDS 40.0%
GTATTATCAAGGCTCACAAC+AGG + chr4.4:12739223-12739242 None:intergenic 40.0%
GTCTTCATTGAGTTTCTCTC+TGG - chr4.4:12742390-12742409 MS.gene47865:CDS 40.0%
TAACTGCTCAAGATGGATCA+AGG - chr4.4:12740325-12740344 MS.gene47865:CDS 40.0%
TAATGTTGTTGCAGAGGAAG+AGG - chr4.4:12739804-12739823 MS.gene47865:CDS 40.0%
TCACAGGATGACAGAATTGA+TGG - chr4.4:12740162-12740181 MS.gene47865:CDS 40.0%
TCCAGTCACAGATTTCTCTT+GGG - chr4.4:12742449-12742468 MS.gene47865:CDS 40.0%
TCCTTCATGTCGGAAAAACA+GGG - chr4.4:12741256-12741275 MS.gene47865:CDS 40.0%
TCTAAGCCTCACTTCAACAT+TGG + chr4.4:12742341-12742360 None:intergenic 40.0%
TCTCAAGGTGATTCTGCTTA+TGG - chr4.4:12742313-12742332 MS.gene47865:CDS 40.0%
TCTGATTCTGATGAAGAGGA+AGG - chr4.4:12741542-12741561 MS.gene47865:CDS 40.0%
TCTGCAAGTTAATCCTTTGG+TGG - chr4.4:12739123-12739142 MS.gene47865:CDS 40.0%
TGAAGAATCAATAGTAGCGC+AGG - chr4.4:12740569-12740588 MS.gene47865:CDS 40.0%
TGACATTGTTCCTACTGAGA+AGG - chr4.4:12739513-12739532 MS.gene47865:CDS 40.0%
TGATCCATCTTGAGCAGTTA+TGG + chr4.4:12740325-12740344 None:intergenic 40.0%
TGGATGATGAAGTTGTTGGT+GGG - chr4.4:12739335-12739354 MS.gene47865:CDS 40.0%
TGTTCAACAAACCATTGGTC+AGG - chr4.4:12741169-12741188 MS.gene47865:CDS 40.0%
TTCCAGTCACAGATTTCTCT+TGG - chr4.4:12742448-12742467 MS.gene47865:CDS 40.0%
TTGAGGATCAACTAGCACTA+GGG - chr4.4:12742251-12742270 MS.gene47865:CDS 40.0%
TTGATCCTCAAGTTTCACAC+CGG + chr4.4:12742242-12742261 None:intergenic 40.0%
TTTGAATCGTTTGAGAAGGG+TGG - chr4.4:12739301-12739320 MS.gene47865:CDS 40.0%
TTTGTGGAGGCTGATGATAA+GGG - chr4.4:12738887-12738906 MS.gene47865:CDS 40.0%
! AGAGAGGCAGATTTTCCAAT+TGG - chr4.4:12742358-12742377 MS.gene47865:CDS 40.0%
! CAATAAGGGCAATCTGAAGT+TGG + chr4.4:12742555-12742574 None:intergenic 40.0%
! GAAGTGGAATCTGATGATGA+AGG - chr4.4:12740210-12740229 MS.gene47865:CDS 40.0%
! GAGAGGCAGATTTTCCAATT+GGG - chr4.4:12742359-12742378 MS.gene47865:CDS 40.0%
! GATGAGAAGTATACAAGTGG+TGG - chr4.4:12739082-12739101 MS.gene47865:CDS 40.0%
! GCTCTTTGATACTGCTACTT+TGG - chr4.4:12740245-12740264 MS.gene47865:CDS 40.0%
! GGCTTTGACATTCAGAACAT+TGG - chr4.4:12742109-12742128 MS.gene47865:CDS 40.0%
! GGTGATGAGAAGTATACAAG+TGG - chr4.4:12739079-12739098 MS.gene47865:CDS 40.0%
! GTTTTTGTTGAGGCGAATGA+TGG - chr4.4:12738854-12738873 MS.gene47865:CDS 40.0%
! TGACAGAGAGATTGATGACT+CGG - chr4.4:12740041-12740060 MS.gene47865:CDS 40.0%
! TGATGGGAATGAGGTTTTTG+TGG - chr4.4:12738871-12738890 MS.gene47865:CDS 40.0%
! TGTTTTTCCGACATGAAGGA+TGG + chr4.4:12741256-12741275 None:intergenic 40.0%
! TTCAACAACGGTGGATTTGA+CGG + chr4.4:12738690-12738709 None:intergenic 40.0%
! TTGCTATTCTTCCGATTCTC+AGG - chr4.4:12742572-12742591 MS.gene47865:CDS 40.0%
! TTTTGTGGAGGCTGATGATA+AGG - chr4.4:12738886-12738905 MS.gene47865:CDS 40.0%
!! AATTTGGGTTCTGCGGTTTT+GGG - chr4.4:12738947-12738966 MS.gene47865:CDS 40.0%
!! ATGTTGATAATGCTGCTGAG+GGG - chr4.4:12739941-12739960 MS.gene47865:CDS 40.0%
!! CATGTTGATAATGCTGCTGA+GGG - chr4.4:12739940-12739959 MS.gene47865:CDS 40.0%
!! GATTGTTACTGACTCAGATG+AGG - chr4.4:12740188-12740207 MS.gene47865:CDS 40.0%
!! GTTGACATTGGAGTTGATGA+TGG - chr4.4:12739571-12739590 MS.gene47865:CDS 40.0%
!! TAATTTGGGTTCTGCGGTTT+TGG - chr4.4:12738946-12738965 MS.gene47865:CDS 40.0%
!! TAGTAGCGCAGGTTTTGTAT+CGG - chr4.4:12740580-12740599 MS.gene47865:CDS 40.0%
!! TGGTAACCTTTCTAAGACTC+CGG - chr4.4:12741364-12741383 MS.gene47865:CDS 40.0%
!! TGGTTTCTGGTGATAATTCG+GGG - chr4.4:12739020-12739039 MS.gene47865:CDS 40.0%
!!! GAAGGTGTTTTTGATGTGGT+TGG - chr4.4:12739271-12739290 MS.gene47865:CDS 40.0%
!!! GATGATAAGGGTTTTGAGGA+GGG - chr4.4:12738899-12738918 MS.gene47865:CDS 40.0%
!!! TGATGATAAGGGTTTTGAGG+AGG - chr4.4:12738898-12738917 MS.gene47865:CDS 40.0%
!!! TGGTGAAGGTGTTTTTGATG+TGG - chr4.4:12739267-12739286 MS.gene47865:CDS 40.0%
AACAGTACCAGCTCTACTCA+TGG + chr4.4:12740445-12740464 None:intergenic 45.0%
AAGACCAGCTTCAGTGCATA+TGG - chr4.4:12740783-12740802 MS.gene47865:CDS 45.0%
ACAGCAAGTATGGAAGTGGT+GGG + chr4.4:12741433-12741452 None:intergenic 45.0%
ACCATATCAGGCAATGGTAC+AGG + chr4.4:12741818-12741837 None:intergenic 45.0%
ACTAGCACTAGGGAAACGAT+TGG - chr4.4:12742261-12742280 MS.gene47865:CDS 45.0%
ACTTCAGACAGGTAAACCTG+CGG - chr4.4:12740386-12740405 MS.gene47865:CDS 45.0%
ACTTGAACAGTAACTGCTGC+CGG + chr4.4:12742007-12742026 None:intergenic 45.0%
AGAAACTGTGTGTCGGAGTT+TGG - chr4.4:12739651-12739670 MS.gene47865:CDS 45.0%
AGAGAGCAATGTTGTTGAGG+TGG - chr4.4:12739762-12739781 MS.gene47865:CDS 45.0%
AGTCTTGGACACCCATAGTT+GGG - chr4.4:12741919-12741938 MS.gene47865:CDS 45.0%
ATAGAGGGTCATGCTGTTGA+GGG - chr4.4:12739697-12739716 MS.gene47865:CDS 45.0%
ATCATCAACTCCAACAGGCT+CGG + chr4.4:12739365-12739384 None:intergenic 45.0%
ATGGAGCCAATGTTGAAGTG+AGG - chr4.4:12742332-12742351 MS.gene47865:CDS 45.0%
ATTGTTCCTACTGAGAAGGC+TGG - chr4.4:12739517-12739536 MS.gene47865:CDS 45.0%
CAAGACAGCAAGTATGGAAG+TGG + chr4.4:12741437-12741456 None:intergenic 45.0%
CAATGTCACTCAGTTGCTCA+TGG + chr4.4:12739501-12739520 None:intergenic 45.0%
CAGCTGGCATACATTGTTAG+AGG - chr4.4:12742136-12742155 MS.gene47865:CDS 45.0%
CATCTTCCACCTCAACAACA+CGG + chr4.4:12739771-12739790 None:intergenic 45.0%
CCAATGTCAACAACCTGATC+AGG + chr4.4:12739562-12739581 None:intergenic 45.0%
CCTCAACAGCACTATCAACA+TGG + chr4.4:12739870-12739889 None:intergenic 45.0%
CCTCAGCAGCATTATCAACA+TGG + chr4.4:12739942-12739961 None:intergenic 45.0%
CGCTTCATCTTCATCATCAG+CGG + chr4.4:12738762-12738781 None:intergenic 45.0%
CTCTTCTTCTTCAACAACGG+TGG + chr4.4:12738699-12738718 None:intergenic 45.0%
CTGTTTCCGGAGTCTTAGAA+AGG + chr4.4:12741373-12741392 None:intergenic 45.0%
CTTGAGGATCAACTAGCACT+AGG - chr4.4:12742250-12742269 MS.gene47865:CDS 45.0%
CTTTACAAGAACTTCTGGCC+TGG - chr4.4:12742598-12742617 MS.gene47865:CDS 45.0%
GAAATTGAGAGCCGTGTTGA+TGG - chr4.4:12739721-12739740 MS.gene47865:CDS 45.0%
GAACCTATTGAGAAGGTTGG+TGG - chr4.4:12739247-12739266 MS.gene47865:CDS 45.0%
GACGTTGCTCCTATTGAGAA+GGG - chr4.4:12739616-12739635 MS.gene47865:CDS 45.0%
GAGGAAGATTTGGAGAAAGG+CGG - chr4.4:12738785-12738804 MS.gene47865:CDS 45.0%
GAGGAGGAAGATTTGGAGAA+AGG - chr4.4:12738782-12738801 MS.gene47865:CDS 45.0%
GATCAAGGTGGGATTGACAA+TGG - chr4.4:12741491-12741510 MS.gene47865:CDS 45.0%
GCCGCTAAACATGGAGAAAA+TGG - chr4.4:12742073-12742092 MS.gene47865:CDS 45.0%
GCGTCTGGATTAACGAGAAT+TGG + chr4.4:12738668-12738687 None:intergenic 45.0%
GCTCTCTTAAAAGCAGCATC+TGG - chr4.4:12740270-12740289 MS.gene47865:CDS 45.0%
GGATGATGAAGTTGTTGGTG+GGG - chr4.4:12739336-12739355 MS.gene47865:CDS 45.0%
GGCCTTCATCAACAAATTCC+CGG - chr4.4:12741985-12742004 MS.gene47865:CDS 45.0%
GGGGAAGAAGATGAAGAGAA+TGG - chr4.4:12741776-12741795 MS.gene47865:CDS 45.0%
GGTCGATGGAGTGAAAGTAA+GGG - chr4.4:12740842-12740861 MS.gene47865:CDS 45.0%
GTCGTGGATGATGAAGTTGT+TGG - chr4.4:12739331-12739350 MS.gene47865:CDS 45.0%
GTGGATGATGAAGTTGTTGG+TGG - chr4.4:12739334-12739353 MS.gene47865:CDS 45.0%
GTTCTTGGTAAAACTGGCGT+GGG - chr4.4:12740723-12740742 MS.gene47865:CDS 45.0%
TCACCACCAACCTTCTCAAT+AGG + chr4.4:12739253-12739272 None:intergenic 45.0%
TCAGAACATTGGAAAGCAGC+TGG - chr4.4:12742120-12742139 MS.gene47865:CDS 45.0%
TCATGTCGGAAAAACAGGGA+TGG - chr4.4:12741260-12741279 MS.gene47865:CDS 45.0%
TCTTGGGCGAAGCTATAAGA+TGG - chr4.4:12742465-12742484 MS.gene47865:CDS 45.0%
TGACATTGCTCCTACTGAGA+AGG - chr4.4:12739408-12739427 MS.gene47865:CDS 45.0%
TGACGTTGCTCCTATTGAGA+AGG - chr4.4:12739615-12739634 MS.gene47865:CDS 45.0%
TGATGAAGTGAAGGAGGATG+AGG - chr4.4:12738832-12738851 MS.gene47865:CDS 45.0%
TGCTTCCTAACGGTCAAAGT+TGG - chr4.4:12741291-12741310 MS.gene47865:CDS 45.0%
TGGAGAAAATGGATCGACCA+TGG - chr4.4:12742084-12742103 MS.gene47865:CDS 45.0%
TGGATTAACGAGAATTGGCC+TGG + chr4.4:12738663-12738682 None:intergenic 45.0%
TGGTCGATGGAGTGAAAGTA+AGG - chr4.4:12740841-12740860 MS.gene47865:CDS 45.0%
TGTTGAAGTGAGGCTTAGAG+AGG - chr4.4:12742342-12742361 MS.gene47865:CDS 45.0%
TGTTGATCGTGTTATCGAGG+TGG - chr4.4:12739978-12739997 MS.gene47865:CDS 45.0%
TTCTGTCACAGCAGTAGTAG+CGG + chr4.4:12740811-12740830 None:intergenic 45.0%
TTGGGTGAAAATGTGTCCAC+CGG - chr4.4:12742220-12742239 MS.gene47865:CDS 45.0%
TTTCAGCCTAGATGCTGCTA+AGG - chr4.4:12740638-12740657 MS.gene47865:CDS 45.0%
! ATATGCACTGAAGCTGGTCT+TGG + chr4.4:12740784-12740803 None:intergenic 45.0%
! CAATGTTGACCGTGTTGTTG+AGG - chr4.4:12739903-12739922 MS.gene47865:CDS 45.0%
! CCTGATCAGGTTGTTGACAT+TGG - chr4.4:12739559-12739578 MS.gene47865:CDS 45.0%
! CGCTGATGATGAAGATGAAG+CGG - chr4.4:12738760-12738779 MS.gene47865:CDS 45.0%
! GCTGGTGATGTTGTTGATGA+AGG - chr4.4:12739430-12739449 MS.gene47865:CDS 45.0%
! GGAGGATGAGGTTTTTGTTG+AGG - chr4.4:12738844-12738863 MS.gene47865:CDS 45.0%
! GGCTGATGATAAGGGTTTTG+AGG - chr4.4:12738895-12738914 MS.gene47865:CDS 45.0%
! GGGAAGTTGGTTCCAAGAAA+CGG + chr4.4:12741883-12741902 None:intergenic 45.0%
! GGTGTCTGAAATTGAAGAGG+TGG - chr4.4:12739186-12739205 MS.gene47865:CDS 45.0%
! GGTTTACCTGTCTGAAGTGA+CGG + chr4.4:12740384-12740403 None:intergenic 45.0%
! GTCACTTTCGCAATAGGTCT+GGG + chr4.4:12738740-12738759 None:intergenic 45.0%
! GTCTGAAATTGAAGAGGTGG+TGG - chr4.4:12739189-12739208 MS.gene47865:CDS 45.0%
! GTGTTGTTGAGGTGGAAGAT+GGG - chr4.4:12739842-12739861 MS.gene47865:CDS 45.0%
! GTTAATCCTTTGGTGGATGG+AGG - chr4.4:12739130-12739149 MS.gene47865:CDS 45.0%
! TGATGATGAAGATGAAGCGG+AGG - chr4.4:12738763-12738782 MS.gene47865:CDS 45.0%
! TGGGAATGAGGTTTTTGTGG+AGG - chr4.4:12738874-12738893 MS.gene47865:CDS 45.0%
! TGTTGATCGTGTTGTTGAGG+TGG - chr4.4:12739834-12739853 MS.gene47865:CDS 45.0%
! TGTTGTTGATGAGCCTGATC+AGG - chr4.4:12739546-12739565 MS.gene47865:CDS 45.0%
! TTAAAAGCAGCATCTGGAGC+AGG - chr4.4:12740276-12740295 MS.gene47865:CDS 45.0%
! TTAACGAGAATTGGCCTGGA+AGG + chr4.4:12738659-12738678 None:intergenic 45.0%
! TTAGTGGACAGATCACTGTG+AGG - chr4.4:12742515-12742534 MS.gene47865:CDS 45.0%
!! AGAGATTGATGACTCGGTGT+CGG - chr4.4:12740047-12740066 MS.gene47865:CDS 45.0%
!! ATTGAGAAGGTTGGTGGTGA+AGG - chr4.4:12739253-12739272 MS.gene47865:CDS 45.0%
!! CACTTCCATACTTGCTGTCT+TGG - chr4.4:12741435-12741454 MS.gene47865:CDS 45.0%
!! CCAATTAACGGTGCCGTTAA+CGG - chr4.4:12738581-12738600 MS.gene47865:CDS 45.0%
!! CCATGTTGATAATGCTGCTG+AGG - chr4.4:12739939-12739958 MS.gene47865:CDS 45.0%
!! CCATGTTGATAGTGCTGTTG+AGG - chr4.4:12739867-12739886 MS.gene47865:CDS 45.0%
!! GGTGTTTTTGATGTGGTTGG+TGG - chr4.4:12739274-12739293 MS.gene47865:CDS 45.0%
!! GGTTTCTGGTGATAATTCGG+GGG - chr4.4:12739021-12739040 MS.gene47865:CDS 45.0%
!! GTTGGTGTTGTTGAGAATGG+TGG - chr4.4:12739043-12739062 MS.gene47865:CDS 45.0%
!! TACTGACTCAGATGAGGAAG+TGG - chr4.4:12740194-12740213 MS.gene47865:CDS 45.0%
!! TCCCTGTTTTTCCGACATGA+AGG + chr4.4:12741260-12741279 None:intergenic 45.0%
!! TGCCGGGAATTTGTTGATGA+AGG + chr4.4:12741990-12742009 None:intergenic 45.0%
!! TGTTGATAATGCTGCTGAGG+GGG - chr4.4:12739942-12739961 MS.gene47865:CDS 45.0%
!! TGTTGATAGTGCTGTTGAGG+AGG - chr4.4:12739870-12739889 MS.gene47865:CDS 45.0%
!! TTCTGAAACCAAACAGCCTG+CGG + chr4.4:12741403-12741422 None:intergenic 45.0%
!!! TCCGATGACGGTTTTGTTAG+CGG - chr4.4:12738617-12738636 MS.gene47865:CDS 45.0%
AACTGTGTGTCGGAGTTTGG+AGG - chr4.4:12739654-12739673 MS.gene47865:CDS 50.0%
AAGAGGAGTCTGAACCTTCC+AGG - chr4.4:12738642-12738661 MS.gene47865:CDS 50.0%
ACAGTCGTGGTCCCAACTAT+GGG + chr4.4:12741933-12741952 None:intergenic 50.0%
ACATCACCAGCCTTCTCAGT+AGG + chr4.4:12739421-12739440 None:intergenic 50.0%
AGAATCACCTTGAGACCGCA+CGG + chr4.4:12742308-12742327 None:intergenic 50.0%
AGACAGGTAAACCTGCGGTA+CGG - chr4.4:12740391-12740410 MS.gene47865:CDS 50.0%
ATCCTCAAGTTTCACACCGG+TGG + chr4.4:12742239-12742258 None:intergenic 50.0%
ATCGGAACCGTGACCGTTAA+CGG + chr4.4:12738597-12738616 None:intergenic 50.0%
ATTGCTCCTACTGAGAAGGC+TGG - chr4.4:12739412-12739431 MS.gene47865:CDS 50.0%
CAAACCATTGGTCAGGCTGT+CGG - chr4.4:12741176-12741195 MS.gene47865:CDS 50.0%
CAACTATGGGTGTCCAAGAC+TGG + chr4.4:12741920-12741939 None:intergenic 50.0%
CAACTTCCCAGTTGCTGACA+AGG - chr4.4:12741894-12741913 MS.gene47865:CDS 50.0%
CACTCTCCTTAGCAGCATCT+AGG + chr4.4:12740647-12740666 None:intergenic 50.0%
CAGCAAGTATGGAAGTGGTG+GGG + chr4.4:12741432-12741451 None:intergenic 50.0%
CAGTCTTGGACACCCATAGT+TGG - chr4.4:12741918-12741937 MS.gene47865:CDS 50.0%
CATAGAGGGTCATGCTGTTG+AGG - chr4.4:12739696-12739715 MS.gene47865:CDS 50.0%
CCACCATCATCAACTCCAAC+AGG + chr4.4:12739370-12739389 None:intergenic 50.0%
CCGTTAACGGCACCGTTAAT+TGG + chr4.4:12738584-12738603 None:intergenic 50.0%
CCTCAACAGCACCATCAACA+CGG + chr4.4:12739735-12739754 None:intergenic 50.0%
CGATCAGTTACTAGTGCCCT+TGG - chr4.4:12741029-12741048 MS.gene47865:CDS 50.0%
CGTGTTATCGAGGTGGATGA+TGG - chr4.4:12739985-12740004 MS.gene47865:CDS 50.0%
CTGAATGTCAAAGCCTGCCA+TGG + chr4.4:12742104-12742123 None:intergenic 50.0%
CTTGAACAGTAACTGCTGCC+GGG + chr4.4:12742006-12742025 None:intergenic 50.0%
CTTGTCAGCAACTGGGAAGT+TGG + chr4.4:12741896-12741915 None:intergenic 50.0%
GAAAAACAGGGATGGCCAGA+AGG - chr4.4:12741268-12741287 MS.gene47865:CDS 50.0%
GAAAATGGATCGACCATGGC+AGG - chr4.4:12742088-12742107 MS.gene47865:CDS 50.0%
GAAGACTGATCCTGCCCAAT+TGG + chr4.4:12742376-12742395 None:intergenic 50.0%
GACAGCAAGTATGGAAGTGG+TGG + chr4.4:12741434-12741453 None:intergenic 50.0%
GATCAACAGCAGCCTCAACA+TGG + chr4.4:12740014-12740033 None:intergenic 50.0%
GCAGAAGAAGCAATGGAGAG+AGG - chr4.4:12741685-12741704 MS.gene47865:CDS 50.0%
GCCCAAGAGAAATCTGTGAC+TGG + chr4.4:12742453-12742472 None:intergenic 50.0%
GCCGCTAACAAAACCGTCAT+CGG + chr4.4:12738621-12738640 None:intergenic 50.0%
GCCTGTACCATTGCCTGATA+TGG - chr4.4:12741814-12741833 MS.gene47865:CDS 50.0%
GGCAACACCATATCAGGCAA+TGG + chr4.4:12741824-12741843 None:intergenic 50.0%
GGGGAGTGAAGAGGAAGTTA+AGG - chr4.4:12739165-12739184 MS.gene47865:CDS 50.0%
GGTCTCCAACTTTGACCGTT+AGG + chr4.4:12741299-12741318 None:intergenic 50.0%
GGTTCTTGGTAAAACTGGCG+TGG - chr4.4:12740722-12740741 MS.gene47865:CDS 50.0%
GTAAGGGTCATTGACACACC+AGG - chr4.4:12740858-12740877 MS.gene47865:CDS 50.0%
GTACCAGCTCTACTCATGGA+AGG + chr4.4:12740441-12740460 None:intergenic 50.0%
GTTGTTGTAGATGCCGAACC+TGG - chr4.4:12739454-12739473 MS.gene47865:CDS 50.0%
TAACTTAGGGGGGAACCTGA+TGG + chr4.4:12741119-12741138 None:intergenic 50.0%
TAGGGCAAGTGAGAGTTCAC+AGG - chr4.4:12740146-12740165 MS.gene47865:CDS 50.0%
TCGCCATATCGATGGACCAA+GGG + chr4.4:12741048-12741067 None:intergenic 50.0%
TCTGGTGATAATTCGGGGGT+TGG - chr4.4:12739025-12739044 MS.gene47865:CDS 50.0%
TCTGTCACAGCAGTAGTAGC+GGG + chr4.4:12740810-12740829 None:intergenic 50.0%
TGAAGCGGAGGAGGAAGATT+TGG - chr4.4:12738775-12738794 MS.gene47865:CDS 50.0%
TGAGTTTCTCTCTGGTGCAG+TGG - chr4.4:12742398-12742417 MS.gene47865:CDS 50.0%
TGATGAAGATGAAGCGGAGG+AGG - chr4.4:12738766-12738785 MS.gene47865:CDS 50.0%
TGGAGAGGTGATTTAGCCGT+GGG - chr4.4:12742418-12742437 MS.gene47865:CDS 50.0%
TGGGCGAAGCTATAAGATGG+CGG - chr4.4:12742468-12742487 MS.gene47865:CDS 50.0%
TTCACCAGTTTGTCTCCCTG+CGG + chr4.4:12740616-12740635 None:intergenic 50.0%
TTCGCCATATCGATGGACCA+AGG + chr4.4:12741049-12741068 None:intergenic 50.0%
! ATCGGTTTACACTTGCCGCA+GGG - chr4.4:12740598-12740617 MS.gene47865:CDS 50.0%
! CGTGTTGTTGAGGTGGAAGA+TGG - chr4.4:12739841-12739860 MS.gene47865:CDS 50.0%
! CTATAAGATGGCGGTTCGTG+CGG - chr4.4:12742477-12742496 MS.gene47865:CDS 50.0%
! CTGCGGTTATCAGCTGTTTC+CGG + chr4.4:12741386-12741405 None:intergenic 50.0%
! GATGGTGGCAACACCATATC+AGG + chr4.4:12741830-12741849 None:intergenic 50.0%
! GCTGAGGGAAGAGGTGATTT+TGG - chr4.4:12740681-12740700 MS.gene47865:CDS 50.0%
! GGCAGATTTTCCAATTGGGC+AGG - chr4.4:12742363-12742382 MS.gene47865:CDS 50.0%
! GGTCACTTTCGCAATAGGTC+TGG + chr4.4:12738741-12738760 None:intergenic 50.0%
! TATAAGATGGCGGTTCGTGC+GGG - chr4.4:12742478-12742497 MS.gene47865:CDS 50.0%
! TCAGCGGTCACTTTCGCAAT+AGG + chr4.4:12738746-12738765 None:intergenic 50.0%
! TCATCGGTTGCCGCTAAACA+TGG - chr4.4:12742064-12742083 MS.gene47865:CDS 50.0%
! TGACTGGAAATTGGCTCCCA+CGG + chr4.4:12742437-12742456 None:intergenic 50.0%
! TGAGGCGAATGATGGGAATG+AGG - chr4.4:12738862-12738881 MS.gene47865:CDS 50.0%
! TGTTGACCGTGTTGTTGAGG+TGG - chr4.4:12739906-12739925 MS.gene47865:CDS 50.0%
! TTGGTATTAGTGGGGAGCAC+TGG - chr4.4:12742280-12742299 MS.gene47865:CDS 50.0%
!! ATGGAGGTGTTGCTGTTGTG+GGG - chr4.4:12739146-12739165 MS.gene47865:CDS 50.0%
!! CCTGTTGGAGTTGATGATGG+TGG - chr4.4:12739367-12739386 MS.gene47865:CDS 50.0%
!! GAGCCTGTTGGAGTTGATGA+TGG - chr4.4:12739364-12739383 MS.gene47865:CDS 50.0%
!! GAGGTTGTGGGATTGGTTTC+TGG - chr4.4:12739007-12739026 MS.gene47865:CDS 50.0%
!! GATGGAGGTGTTGCTGTTGT+GGG - chr4.4:12739145-12739164 MS.gene47865:CDS 50.0%
!! GGATTCTGAGGTTGTGGGAT+TGG - chr4.4:12739000-12739019 MS.gene47865:CDS 50.0%
!! GGGGTTGGTGTTGTTGAGAA+TGG - chr4.4:12739040-12739059 MS.gene47865:CDS 50.0%
!! GGTGTTGTTGAGAATGGTGG+TGG - chr4.4:12739046-12739065 MS.gene47865:CDS 50.0%
!! GTTGTTGAGAATGGTGGTGG+TGG - chr4.4:12739049-12739068 MS.gene47865:CDS 50.0%
!! TATCGGTTTACACTTGCCGC+AGG - chr4.4:12740597-12740616 MS.gene47865:CDS 50.0%
!! TGGTATTAGTGGGGAGCACT+GGG - chr4.4:12742281-12742300 MS.gene47865:CDS 50.0%
!! TGTTGATGGTGCTGTTGAGG+AGG - chr4.4:12739735-12739754 MS.gene47865:CDS 50.0%
!!! AAGGGTTTTGAGGAGGGTGA+TGG - chr4.4:12738905-12738924 MS.gene47865:CDS 50.0%
AATGGTACAGGCACAGCAGC+TGG + chr4.4:12741806-12741825 None:intergenic 55.0%
CACAGTCGTGGTCCCAACTA+TGG + chr4.4:12741934-12741953 None:intergenic 55.0%
CACCTTGATCAGCCAGCTTG+GGG + chr4.4:12741481-12741500 None:intergenic 55.0%
CACGGTTCCGATTCCGATGA+CGG - chr4.4:12738605-12738624 MS.gene47865:CDS 55.0%
CATAGTTGGGACCACGACTG+TGG - chr4.4:12741932-12741951 MS.gene47865:CDS 55.0%
CCAAGCTGGCTGATCAAGGT+GGG - chr4.4:12741480-12741499 MS.gene47865:CDS 55.0%
CCACCTTGATCAGCCAGCTT+GGG + chr4.4:12741482-12741501 None:intergenic 55.0%
CGGAAACAGCTGATAACCGC+AGG - chr4.4:12741384-12741403 MS.gene47865:CDS 55.0%
CTCTTCCCTCAGCTTCAAGC+CGG + chr4.4:12740674-12740693 None:intergenic 55.0%
GAAGGGTGGTGAAGATGTCG+TGG - chr4.4:12739315-12739334 MS.gene47865:CDS 55.0%
GACCACGACTGTGGTTACGA+CGG - chr4.4:12741941-12741960 MS.gene47865:CDS 55.0%
GCAACACCTCCATCCACCAA+AGG + chr4.4:12739139-12739158 None:intergenic 55.0%
GCTCCTTCCATGAGTAGAGC+TGG - chr4.4:12740435-12740454 MS.gene47865:CDS 55.0%
GCTGATAACCGCAGGCTGTT+TGG - chr4.4:12741392-12741411 MS.gene47865:CDS 55.0%
GGGACCATATGCACTGAAGC+TGG + chr4.4:12740790-12740809 None:intergenic 55.0%
GTCCACCGGTGTGAAACTTG+AGG - chr4.4:12742234-12742253 MS.gene47865:CDS 55.0%
GTGCCCTTGGTCCATCGATA+TGG - chr4.4:12741042-12741061 MS.gene47865:CDS 55.0%
GTGGAGAGGTGATTTAGCCG+TGG - chr4.4:12742417-12742436 MS.gene47865:CDS 55.0%
GTTGCTGACAAGGCCAGTCT+TGG - chr4.4:12741904-12741923 MS.gene47865:CDS 55.0%
TCAAGGCTCACAACAGGTGC+AGG + chr4.4:12739217-12739236 None:intergenic 55.0%
TCTTCCCTCAGCTTCAAGCC+GGG + chr4.4:12740673-12740692 None:intergenic 55.0%
TGCTGTTGTGGGGAGTGAAG+AGG - chr4.4:12739156-12739175 MS.gene47865:CDS 55.0%
TTCTCTCTGGTGCAGTGGAG+AGG - chr4.4:12742403-12742422 MS.gene47865:CDS 55.0%
TTGGGACCGTCACTTCAGAC+AGG - chr4.4:12740375-12740394 MS.gene47865:CDS 55.0%
! AAAGCAGCATCTGGAGCAGG+AGG - chr4.4:12740279-12740298 MS.gene47865:CDS 55.0%
! AGTATGGAAGTGGTGGGGAG+CGG + chr4.4:12741427-12741446 None:intergenic 55.0%
! GAGGCTTAAATGGTGGGAGC+TGG + chr4.4:12741583-12741602 None:intergenic 55.0%
! GGATGATGGCAGCCATGTTG+AGG - chr4.4:12739999-12740018 MS.gene47865:CDS 55.0%
! TCTGGAGCAGGAGGTGAAGA+TGG - chr4.4:12740288-12740307 MS.gene47865:CDS 55.0%
! TGATAATGCTGCTGAGGGGG+AGG - chr4.4:12739945-12739964 MS.gene47865:CDS 55.0%
!! AACGGTGCCGTTAACGGTCA+CGG - chr4.4:12738587-12738606 MS.gene47865:CDS 55.0%
!! AATGGTGGTGGTGGTGGTGA+TGG - chr4.4:12739058-12739077 MS.gene47865:CDS 55.0%
!! AGACTGGCCTTGTCAGCAAC+TGG + chr4.4:12741904-12741923 None:intergenic 55.0%
!! CCGTGTTGATGGTGCTGTTG+AGG - chr4.4:12739732-12739751 MS.gene47865:CDS 55.0%
!! CTGCTAAGGAGAGTGCTTCC+CGG - chr4.4:12740652-12740671 MS.gene47865:CDS 55.0%
!! GACCGTTAGGAAGCACCTTC+TGG + chr4.4:12741286-12741305 None:intergenic 55.0%
!! GACTGGCCTTGTCAGCAACT+GGG + chr4.4:12741903-12741922 None:intergenic 55.0%
!! GGATGGAGGTGTTGCTGTTG+TGG - chr4.4:12739144-12739163 MS.gene47865:CDS 55.0%
!! GGCCAGAAGGTGCTTCCTAA+CGG - chr4.4:12741281-12741300 MS.gene47865:CDS 55.0%
!! GTTGAGAATGGTGGTGGTGG+TGG - chr4.4:12739052-12739071 MS.gene47865:CDS 55.0%
!! TGACTCGGTGTCGGATACGA+AGG - chr4.4:12740056-12740075 MS.gene47865:CDS 55.0%
!!! CGGTTTTGTTAGCGGCGAAG+AGG - chr4.4:12738625-12738644 MS.gene47865:CDS 55.0%
!!! GGTTCTGCGGTTTTGGGTGA+TGG - chr4.4:12738953-12738972 MS.gene47865:CDS 55.0%
!!! GGTTTTGAGGAGGGTGATGG+TGG - chr4.4:12738908-12738927 MS.gene47865:CDS 55.0%
!!! TCTGCGGTTTTGGGTGATGG+TGG - chr4.4:12738956-12738975 MS.gene47865:CDS 55.0%
AGTGACGGTCCCAAACCTGC+AGG + chr4.4:12740369-12740388 None:intergenic 60.0%
CACCCCAAGCTGGCTGATCA+AGG - chr4.4:12741476-12741495 MS.gene47865:CDS 60.0%
CACCGTCGTAACCACAGTCG+TGG + chr4.4:12741946-12741965 None:intergenic 60.0%
CCCAAGCTGGCTGATCAAGG+TGG - chr4.4:12741479-12741498 MS.gene47865:CDS 60.0%
CCCACCTTGATCAGCCAGCT+TGG + chr4.4:12741483-12741502 None:intergenic 60.0%
CGGCTTGAAGCTGAGGGAAG+AGG - chr4.4:12740672-12740691 MS.gene47865:CDS 60.0%
CTTGCCGCAGGGAGACAAAC+TGG - chr4.4:12740609-12740628 MS.gene47865:CDS 60.0%
GGAGCAGGAGGTGAAGATGG+CGG - chr4.4:12740291-12740310 MS.gene47865:CDS 60.0%
GTCACCGACAGCCTGACCAA+TGG + chr4.4:12741183-12741202 None:intergenic 60.0%
GTGACGGTCCCAAACCTGCA+GGG + chr4.4:12740368-12740387 None:intergenic 60.0%
GTGTCGGAGTTTGGAGGCTG+AGG - chr4.4:12739660-12739679 MS.gene47865:CDS 60.0%
GTTGAGCGCCCTGCAGGTTT+GGG - chr4.4:12740357-12740376 MS.gene47865:CDS 60.0%
TGTTGAGCGCCCTGCAGGTT+TGG - chr4.4:12740356-12740375 MS.gene47865:CDS 60.0%
TTCTCTGTTGAGCGCCCTGC+AGG - chr4.4:12740351-12740370 MS.gene47865:CDS 60.0%
! ACGGTGGATTTGACGGCGTC+TGG + chr4.4:12738683-12738702 None:intergenic 60.0%
! GCTTCCCGGCTTGAAGCTGA+GGG - chr4.4:12740666-12740685 MS.gene47865:CDS 60.0%
! GTATGGAAGTGGTGGGGAGC+GGG + chr4.4:12741426-12741445 None:intergenic 60.0%
! TGCTTCCCGGCTTGAAGCTG+AGG - chr4.4:12740665-12740684 MS.gene47865:CDS 60.0%
ACTGGGACCGTGCGGTCTCA+AGG - chr4.4:12742298-12742317 MS.gene47865:CDS 65.0%
CTGCCTCTGCTCCTCCAGAC+GGG - chr4.4:12741093-12741112 MS.gene47865:CDS 65.0%
GAACCTGATGGCCCGTCTGG+AGG + chr4.4:12741107-12741126 None:intergenic 65.0%
GCTGCCTCTGCTCCTCCAGA+CGG - chr4.4:12741092-12741111 MS.gene47865:CDS 65.0%
GGACGGTTTGACCGTACCGC+AGG + chr4.4:12740405-12740424 None:intergenic 65.0%
GTCACGTGCTCACCCCAAGC+TGG - chr4.4:12741466-12741485 MS.gene47865:CDS 65.0%
! GCAGGAGGTGAAGATGGCGG+CGG - chr4.4:12740294-12740313 MS.gene47865:CDS 65.0%
GCTCCTCCAGACGGGCCATC+AGG - chr4.4:12741101-12741120 MS.gene47865:CDS 70.0%
GGGGAACCTGATGGCCCGTC+TGG + chr4.4:12741110-12741129 None:intergenic 70.0%
GGTGGGGATGCCGAGCCTGT+TGG - chr4.4:12739352-12739371 MS.gene47865:CDS 70.0%
TGGCCCGTCTGGAGGAGCAG+AGG + chr4.4:12741099-12741118 None:intergenic 70.0%
!! TGGGGAGCACTGGGACCGTG+CGG - chr4.4:12742290-12742309 MS.gene47865:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 12738539 12742648 12738539 ID=MS.gene47865
chr4.4 mRNA 12738539 12742648 12738539 ID=MS.gene47865.t1;Parent=MS.gene47865
chr4.4 exon 12738539 12742648 12738539 ID=MS.gene47865.t1.exon1;Parent=MS.gene47865.t1
chr4.4 CDS 12738539 12742648 12738539 ID=cds.MS.gene47865.t1;Parent=MS.gene47865.t1
Gene Sequence

>MS.gene47865

ATGGATTCTCAAACCCTATCTTCTTCTTCCCAATTTCACGAACCAATTAACGGTGCCGTTAACGGTCACGGTTCCGATTCCGATGACGGTTTTGTTAGCGGCGAAGAGGAGTCTGAACCTTCCAGGCCAATTCTCGTTAATCCAGACGCCGTCAAATCCACCGTTGTTGAAGAAGAAGAGAGTTTCGATGATGTTTCTCCCAGACCTATTGCGAAAGTGACCGCTGATGATGAAGATGAAGCGGAGGAGGAAGATTTGGAGAAAGGCGGTGATGATAGTGATGAAAATTTTGTTGATGAAGTGAAGGAGGATGAGGTTTTTGTTGAGGCGAATGATGGGAATGAGGTTTTTGTGGAGGCTGATGATAAGGGTTTTGAGGAGGGTGATGGTGGAACCGTTGAAACCAATAATTTGGGTTCTGCGGTTTTGGGTGATGGTGGAACTGTCGAAACTAATAATTTGGATTCTGAGGTTGTGGGATTGGTTTCTGGTGATAATTCGGGGGTTGGTGTTGTTGAGAATGGTGGTGGTGGTGGTGATGGTGATGAGAAGTATACAAGTGGTGGAGATTTTGTTGTTGATACTCTGCAAGTTAATCCTTTGGTGGATGGAGGTGTTGCTGTTGTGGGGAGTGAAGAGGAAGTTAAGGTGTCTGAAATTGAAGAGGTGGTGGCGCCTGCACCTGTTGTGAGCCTTGATAATACTTTTGAACCTATTGAGAAGGTTGGTGGTGAAGGTGTTTTTGATGTGGTTGGTGGTAGTTTTGAATCGTTTGAGAAGGGTGGTGAAGATGTCGTGGATGATGAAGTTGTTGGTGGGGATGCCGAGCCTGTTGGAGTTGATGATGGTGGTGTACATGAGCATACAAGTGACATTGCTCCTACTGAGAAGGCTGGTGATGTTGTTGATGAAGGTGTTGTTGTAGATGCCGAACCTGGTAAAGTTGATGATGATGTTTCCCATGAGCAACTGAGTGACATTGTTCCTACTGAGAAGGCTGGTGATGTTGTTGTTGATGAGCCTGATCAGGTTGTTGACATTGGAGTTGATGATGGTGTTGCACGTGAGCAAGTGAGTGACGTTGCTCCTATTGAGAAGGGTGAAGAAAGTTCAGAAACTGTGTGTCGGAGTTTGGAGGCTGAGGAAGATGAGATAAACATAGAGGGTCATGCTGTTGAGGGTGAAATTGAGAGCCGTGTTGATGGTGCTGTTGAGGAGGAAGTAGAGAGCAATGTTGTTGAGGTGGAAGATGGGAGCAATGTTGATAATGTTGTTGCAGAGGAAGAGGAGAGTAATGTTGATCGTGTTGTTGAGGTGGAAGATGAGAGCCATGTTGATAGTGCTGTTGAGGAGGAAACGAAGAGCAATGTTGACCGTGTTGTTGAGGTGGAAGATGGGAGCCATGTTGATAATGCTGCTGAGGGGGAGGCTGAGAGCAATGTTGATCGTGTTATCGAGGTGGATGATGGCAGCCATGTTGAGGCTGCTGTTGATCATCACATTGACAGAGAGATTGATGACTCGGTGTCGGATACGAAGGATGAATCAATGATCTTTGGAGGCTCCGATTCTGCTAACAAATACTTGGAGGAATTGGAGAAGCAAATTAGGGCAAGTGAGAGTTCACAGGATGACAGAATTGATGGCCAGATTGTTACTGACTCAGATGAGGAAGTGGAATCTGATGATGAAGGAGATAACAAGGAGCTCTTTGATACTGCTACTTTGGCTGCTCTCTTAAAAGCAGCATCTGGAGCAGGAGGTGAAGATGGCGGCGGTATCACCATAACTGCTCAAGATGGATCAAGGCTTTTCTCTGTTGAGCGCCCTGCAGGTTTGGGACCGTCACTTCAGACAGGTAAACCTGCGGTACGGTCAAACCGTCCCAATCTTTTTGCTCCTTCCATGAGTAGAGCTGGTACTGTTGTTTCTGATACCAATTTGAGCGTAGAAGAGAAGATGAAACTGGAGAAATTGCAGGAAATTAGGATAAAATACCTAAGAATGGTTCAGAGACTAGGTTTTACTACTGAAGAATCAATAGTAGCGCAGGTTTTGTATCGGTTTACACTTGCCGCAGGGAGACAAACTGGTGAAAATTTCAGCCTAGATGCTGCTAAGGAGAGTGCTTCCCGGCTTGAAGCTGAGGGAAGAGGTGATTTTGGATTTTCAATAAATATATTGGTTCTTGGTAAAACTGGCGTGGGAAAGAGTGCTACGATAAATTCAATTTTTGGTGAAACCAAGACCAGCTTCAGTGCATATGGTCCCGCTACTACTGCTGTGACAGAAATTGTTGGAATGGTCGATGGAGTGAAAGTAAGGGTCATTGACACACCAGGTTTGAAATCTTCTGCATTTGAACAAAGTTACAACAGAAAAGTCTTGTCTTATGTGAAGAAATTGACCAAAAATTCTCCCCCTGATATTGTTCTTTATGTGGATCGACTCGACCTACAAACTAGAGATATGAATGATTTGCCCATGTTGCGATCAGTTACTAGTGCCCTTGGTCCATCGATATGGCGAAATGTGATAGTCACTCTGACTCATGCTGCCTCTGCTCCTCCAGACGGGCCATCAGGTTCCCCCCTAAGTTATGATGTATTTGTTGCTCAAAGAACTCATATTGTTCAACAAACCATTGGTCAGGCTGTCGGTGACCTACGTCTTATGAATCCAAGTTTGATGAATCCAGTTTCTCTTGTTGAAAACCATCCTTCATGTCGGAAAAACAGGGATGGCCAGAAGGTGCTTCCTAACGGTCAAAGTTGGAGACCTCTGTTATTGCTTTTGTGTTACTCAATGAAGATTCTCTCAGATGCTGGTAACCTTTCTAAGACTCCGGAAACAGCTGATAACCGCAGGCTGTTTGGTTTCAGAACCCGCTCCCCACCACTTCCATACTTGCTGTCTTGGTTGTTGCAGTCACGTGCTCACCCCAAGCTGGCTGATCAAGGTGGGATTGACAATGGTGATTCTGATGTTGAAATGGCTGACTTGTCTGATTCTGATGAAGAGGAAGGTGAAGATGAATATGACCAGCTCCCACCATTTAAGCCTCTTAAGAAGTCACAGATTGCTAAGCTTAATAGAGAACAGAAAAAGGCATATCTTGAGGAGTATGAGTACCGAGTGAAACTTTTGCAGAAGAAGCAATGGAGAGAGGAGTTGAAAAGGATGAGAGAGATGAAGAAAAGAGGAGGTAAAACTGTTGAAAATGATATTGGCTTTATGGGGGAAGAAGATGAAGAGAATGGAAGTCCAGCTGCTGTGCCTGTACCATTGCCTGATATGGTGTTGCCACCATCCTTTGATAGTGATAATCCAGCTTATAGATACCGTTTCTTGGAACCAACTTCCCAGTTGCTGACAAGGCCAGTCTTGGACACCCATAGTTGGGACCACGACTGTGGTTACGACGGTGTTAACATTGAAAACAGTATGGCCTTCATCAACAAATTCCCGGCAGCAGTTACTGTTCAAGTAACAAAAGACAAACAAGATTTCAGCATTCATTTGGATTCATCGGTTGCCGCTAAACATGGAGAAAATGGATCGACCATGGCAGGCTTTGACATTCAGAACATTGGAAAGCAGCTGGCATACATTGTTAGAGGCGAGACCAAATTCAAAAATTTCAAAAGAAATAAAACTGCAGCTGGAGTATCTGTGACATTTTTGGGTGAAAATGTGTCCACCGGTGTGAAACTTGAGGATCAACTAGCACTAGGGAAACGATTGGTATTAGTGGGGAGCACTGGGACCGTGCGGTCTCAAGGTGATTCTGCTTATGGAGCCAATGTTGAAGTGAGGCTTAGAGAGGCAGATTTTCCAATTGGGCAGGATCAGTCTTCATTGAGTTTCTCTCTGGTGCAGTGGAGAGGTGATTTAGCCGTGGGAGCCAATTTCCAGTCACAGATTTCTCTTGGGCGAAGCTATAAGATGGCGGTTCGTGCGGGATTGAACAACAAGCTTAGTGGACAGATCACTGTGAGGACAAGTAGTTCAGACCAACTTCAGATTGCCCTTATTGCTATTCTTCCGATTCTCAGGACTCTTTACAAGAACTTCTGGCCTGGTGCTAGTGATAAATACTCCATCTATTGA
Protein sequence

>MS.gene47865.t1

MDSQTLSSSSQFHEPINGAVNGHGSDSDDGFVSGEEESEPSRPILVNPDAVKSTVVEEEESFDDVSPRPIAKVTADDEDEAEEEDLEKGGDDSDENFVDEVKEDEVFVEANDGNEVFVEADDKGFEEGDGGTVETNNLGSAVLGDGGTVETNNLDSEVVGLVSGDNSGVGVVENGGGGGDGDEKYTSGGDFVVDTLQVNPLVDGGVAVVGSEEEVKVSEIEEVVAPAPVVSLDNTFEPIEKVGGEGVFDVVGGSFESFEKGGEDVVDDEVVGGDAEPVGVDDGGVHEHTSDIAPTEKAGDVVDEGVVVDAEPGKVDDDVSHEQLSDIVPTEKAGDVVVDEPDQVVDIGVDDGVAREQVSDVAPIEKGEESSETVCRSLEAEEDEINIEGHAVEGEIESRVDGAVEEEVESNVVEVEDGSNVDNVVAEEEESNVDRVVEVEDESHVDSAVEEETKSNVDRVVEVEDGSHVDNAAEGEAESNVDRVIEVDDGSHVEAAVDHHIDREIDDSVSDTKDESMIFGGSDSANKYLEELEKQIRASESSQDDRIDGQIVTDSDEEVESDDEGDNKELFDTATLAALLKAASGAGGEDGGGITITAQDGSRLFSVERPAGLGPSLQTGKPAVRSNRPNLFAPSMSRAGTVVSDTNLSVEEKMKLEKLQEIRIKYLRMVQRLGFTTEESIVAQVLYRFTLAAGRQTGENFSLDAAKESASRLEAEGRGDFGFSINILVLGKTGVGKSATINSIFGETKTSFSAYGPATTAVTEIVGMVDGVKVRVIDTPGLKSSAFEQSYNRKVLSYVKKLTKNSPPDIVLYVDRLDLQTRDMNDLPMLRSVTSALGPSIWRNVIVTLTHAASAPPDGPSGSPLSYDVFVAQRTHIVQQTIGQAVGDLRLMNPSLMNPVSLVENHPSCRKNRDGQKVLPNGQSWRPLLLLLCYSMKILSDAGNLSKTPETADNRRLFGFRTRSPPLPYLLSWLLQSRAHPKLADQGGIDNGDSDVEMADLSDSDEEEGEDEYDQLPPFKPLKKSQIAKLNREQKKAYLEEYEYRVKLLQKKQWREELKRMREMKKRGGKTVENDIGFMGEEDEENGSPAAVPVPLPDMVLPPSFDSDNPAYRYRFLEPTSQLLTRPVLDTHSWDHDCGYDGVNIENSMAFINKFPAAVTVQVTKDKQDFSIHLDSSVAAKHGENGSTMAGFDIQNIGKQLAYIVRGETKFKNFKRNKTAAGVSVTFLGENVSTGVKLEDQLALGKRLVLVGSTGTVRSQGDSAYGANVEVRLREADFPIGQDQSSLSFSLVQWRGDLAVGANFQSQISLGRSYKMAVRAGLNNKLSGQITVRTSSSDQLQIALIAILPILRTLYKNFWPGASDKYSIY