Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48379.t1 | XP_003608963.2 | 98.7 | 475 | 6 | 0 | 1 | 475 | 1 | 475 | 4.70E-270 | 939.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48379.t1 | Q9XFS9 | 81.8 | 477 | 84 | 2 | 1 | 475 | 2 | 477 | 5.3e-222 | 771.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48379.t1 | G7JNV7 | 98.7 | 475 | 6 | 0 | 1 | 475 | 1 | 475 | 3.4e-270 | 939.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050518 | MS.gene48379 | 0.80941 | 1.92E-50 | -1.69E-46 |
| MS.gene050876 | MS.gene48379 | 0.858695 | 6.90E-63 | -1.69E-46 |
| MS.gene05087 | MS.gene48379 | 0.829577 | 4.76E-55 | -1.69E-46 |
| MS.gene054638 | MS.gene48379 | 0.811782 | 5.89E-51 | -1.69E-46 |
| MS.gene054954 | MS.gene48379 | 0.801134 | 1.04E-48 | -1.69E-46 |
| MS.gene055849 | MS.gene48379 | 0.805222 | 1.48E-49 | -1.69E-46 |
| MS.gene057872 | MS.gene48379 | 0.801415 | 9.10E-49 | -1.69E-46 |
| MS.gene058719 | MS.gene48379 | 0.82538 | 4.84E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48379.t1 | MTR_4g106870 | 98.737 | 475 | 6 | 0 | 1 | 475 | 1 | 475 | 0.0 | 964 |
| MS.gene48379.t1 | MTR_8g012565 | 74.098 | 471 | 118 | 3 | 1 | 469 | 1 | 469 | 0.0 | 726 |
| MS.gene48379.t1 | MTR_8g012565 | 73.087 | 379 | 98 | 3 | 1 | 377 | 1 | 377 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48379.t1 | AT5G62790 | 82.390 | 477 | 81 | 2 | 1 | 475 | 2 | 477 | 0.0 | 789 |
| MS.gene48379.t1 | AT5G62790 | 78.715 | 498 | 82 | 3 | 1 | 475 | 1 | 497 | 0.0 | 778 |
Find 109 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAAGCACATTACTTATT+TGG | 0.150895 | 8.3:+17144644 | MS.gene48379:CDS |
| CAAGTCTTGTTACCTAGTTC+TGG | 0.168286 | 8.3:-17141803 | None:intergenic |
| AAGAAAGAACCTGGGAATTT+AGG | 0.189751 | 8.3:-17141564 | None:intergenic |
| TGTTTCCAGGATTAGCTATT+TGG | 0.208608 | 8.3:+17145861 | MS.gene48379:intron |
| GGCAATTAGTGTCTCTTTAT+TGG | 0.216981 | 8.3:-17143502 | None:intergenic |
| AAAACATCCCAACTGGAGTA+TGG | 0.276203 | 8.3:+17144487 | MS.gene48379:CDS |
| CCAACAATAGAGATGGGTTT+AGG | 0.286621 | 8.3:-17141833 | None:intergenic |
| TTCATCTGTTCTTGCACAAT+TGG | 0.303753 | 8.3:+17144838 | MS.gene48379:CDS |
| TCATCTGTTCTTGCACAATT+GGG | 0.311960 | 8.3:+17144839 | MS.gene48379:CDS |
| GCTTTGAAAAGAAAAGAAAA+TGG | 0.329522 | 8.3:+17141701 | MS.gene48379:CDS |
| GCCTATGCTGCTGGCCGCGC+TGG | 0.330237 | 8.3:+17145151 | MS.gene48379:CDS |
| GCGACAACTCTAAACTTATC+TGG | 0.348351 | 8.3:-17142088 | None:intergenic |
| AAGTCTTGTTACCTAGTTCT+GGG | 0.362313 | 8.3:-17141802 | None:intergenic |
| CAACAATAGAGATGGGTTTA+GGG | 0.365991 | 8.3:-17141832 | None:intergenic |
| AGGATTGGCAAACGCATATC+AGG | 0.374634 | 8.3:-17144866 | None:intergenic |
| ATCTCTATTGTTGGATGCAC+TGG | 0.375194 | 8.3:+17141842 | MS.gene48379:CDS |
| TTCTTCGCTTCAGTGTATCC+AGG | 0.416692 | 8.3:+17144072 | MS.gene48379:intron |
| GTTGGATGCACTGGTTCAAT+TGG | 0.420513 | 8.3:+17141851 | MS.gene48379:CDS |
| GCAAACTAGCAGCATATTCT+CGG | 0.421203 | 8.3:-17145981 | None:intergenic |
| ACATCTTTCAGTTTCTCAAC+AGG | 0.421238 | 8.3:-17144446 | None:intergenic |
| CAGGCCATGATAATGTATAA+AGG | 0.421244 | 8.3:-17144886 | None:intergenic |
| GATGGATACTTAATGTTGTC+AGG | 0.430692 | 8.3:-17145118 | None:intergenic |
| TCAATGACGCCTTGTTCTCC+CGG | 0.434922 | 8.3:-17142538 | None:intergenic |
| CAATCCTTTATACATTATCA+TGG | 0.441678 | 8.3:+17144882 | MS.gene48379:CDS |
| TCCAGCGCGGCCAGCAGCAT+AGG | 0.445154 | 8.3:-17145152 | None:intergenic |
| GTGACAACAGTGACTGCATC+CGG | 0.450389 | 8.3:-17142659 | None:intergenic |
| GATCAGTCTCATGCTAGAAC+AGG | 0.456977 | 8.3:-17146024 | None:intergenic |
| TGTTCTCCCGGGATGATCTC+CGG | 0.457319 | 8.3:-17142526 | None:intergenic |
| CGCGCTGGAGGAACCATGAC+AGG | 0.460029 | 8.3:+17145166 | MS.gene48379:CDS |
| CAGAACTAGGTAACAAGACT+TGG | 0.462516 | 8.3:+17141804 | MS.gene48379:CDS |
| ACAGTTGCGGCCATAGAAGC+TGG | 0.466883 | 8.3:+17143462 | MS.gene48379:CDS |
| ATTGCTCGTCCTGGCCATGC+TGG | 0.468681 | 8.3:-17141779 | None:intergenic |
| TATGCTGCTGGCCGCGCTGG+AGG | 0.470238 | 8.3:+17145154 | MS.gene48379:CDS |
| ATGCATTAAAACATCCCAAC+TGG | 0.473839 | 8.3:+17144480 | MS.gene48379:CDS |
| AGAGTTGTCGCACTTGCAGC+TGG | 0.474198 | 8.3:+17142100 | MS.gene48379:CDS |
| AAACATCCCAACTGGAGTAT+GGG | 0.476050 | 8.3:+17144488 | MS.gene48379:CDS |
| CCTAAACCCATCTCTATTGT+TGG | 0.480547 | 8.3:+17141833 | MS.gene48379:CDS |
| CATGATAATGTATAAAGGAT+TGG | 0.483281 | 8.3:-17144881 | None:intergenic |
| ATGAATCTTGCCTATGCTGC+TGG | 0.484349 | 8.3:+17145142 | MS.gene48379:CDS |
| TCTCCAGCTGAACTTAAGTC+CGG | 0.486037 | 8.3:+17141504 | MS.gene48379:CDS |
| GCTTCTATGGCCGCAACTGT+TGG | 0.486636 | 8.3:-17143459 | None:intergenic |
| TTCTCAGGTTGCACGTCACC+CGG | 0.488858 | 8.3:+17142640 | MS.gene48379:intron |
| CATCTGTTCTTGCACAATTG+GGG | 0.489816 | 8.3:+17144840 | MS.gene48379:CDS |
| AGCAGCATAGGCAAGATTCA+TGG | 0.491274 | 8.3:-17145140 | None:intergenic |
| AGCTGGAAAAGACATAGCTT+TGG | 0.491660 | 8.3:+17143479 | MS.gene48379:CDS |
| CGAGTCATTCTAACTGCATC+CGG | 0.492265 | 8.3:+17144118 | MS.gene48379:CDS |
| AATTATTCACTATGACTTGT+GGG | 0.496488 | 8.3:+17145957 | MS.gene48379:CDS |
| GGACCACCACCAGCATGGCC+AGG | 0.499057 | 8.3:+17141770 | MS.gene48379:CDS |
| CGGGCAAGAGGAAGGACAAA+AGG | 0.499562 | 8.3:-17143531 | None:intergenic |
| CGTCCTGGCCATGCTGGTGG+TGG | 0.499985 | 8.3:-17141773 | None:intergenic |
| TCTTCGCTTCAGTGTATCCA+GGG | 0.503635 | 8.3:+17144073 | MS.gene48379:intron |
| TGTTCAGTGCAGTCAACATC+AGG | 0.504129 | 8.3:+17141749 | MS.gene48379:CDS |
| AGGAAGGACAAAAGGACCTC+CGG | 0.506111 | 8.3:-17143523 | None:intergenic |
| TCAGAACAATAGACTCTGTC+AGG | 0.507170 | 8.3:-17144905 | None:intergenic |
| AATAAAGAGACACTAATTGC+CGG | 0.508829 | 8.3:+17143504 | MS.gene48379:CDS |
| TACATACCTAAAAGCACCTC+CGG | 0.511346 | 8.3:-17144137 | None:intergenic |
| AAACCGGACTTAAGTTCAGC+TGG | 0.512666 | 8.3:-17141507 | None:intergenic |
| CGCTGCACTCCTAAATTCCC+AGG | 0.512687 | 8.3:+17141555 | MS.gene48379:CDS |
| AGTAGGCTGTGCAGGACTAA+AGG | 0.515160 | 8.3:+17142688 | MS.gene48379:CDS |
| AGTTCTGGGATTGCTCGTCC+TGG | 0.518603 | 8.3:-17141788 | None:intergenic |
| AAATTATTCACTATGACTTG+TGG | 0.522725 | 8.3:+17145956 | MS.gene48379:CDS |
| CATTACTCTTCTGATAGATC+AGG | 0.523314 | 8.3:+17142129 | MS.gene48379:CDS |
| TTTCTAACAGCAACAAGTTG+TGG | 0.525340 | 8.3:-17142451 | None:intergenic |
| ATTGAATGTATGATTGATTG+TGG | 0.526824 | 8.3:-17144701 | None:intergenic |
| AGTGCAGCGGTTAGACTTGA+GGG | 0.531828 | 8.3:-17141541 | None:intergenic |
| ACGGGAATAGTAGGCTGTGC+AGG | 0.536835 | 8.3:+17142680 | MS.gene48379:CDS |
| GAGTGCAGCGGTTAGACTTG+AGG | 0.537742 | 8.3:-17141542 | None:intergenic |
| ACATTCAATGATTGAAACAC+AGG | 0.537807 | 8.3:+17144715 | MS.gene48379:CDS |
| ACTGTTGTCACGGGAATAGT+AGG | 0.538998 | 8.3:+17142671 | MS.gene48379:CDS |
| GAGATCATCCCGGGAGAACA+AGG | 0.540077 | 8.3:+17142529 | MS.gene48379:CDS |
| CTGTTCTTGCACAATTGGGG+TGG | 0.541920 | 8.3:+17144843 | MS.gene48379:CDS |
| GTGCACCCTCTGTTAACCCC+TGG | 0.548422 | 8.3:-17144090 | None:intergenic |
| GGACGAGCAATCCCAGAACT+AGG | 0.548767 | 8.3:+17141791 | MS.gene48379:CDS |
| CACTGGTTCAATTGGAACTC+AGG | 0.550266 | 8.3:+17141859 | MS.gene48379:CDS |
| GATGCAGTCACTGTTGTCAC+GGG | 0.557100 | 8.3:+17142662 | MS.gene48379:CDS |
| GCTCGTCCTGGCCATGCTGG+TGG | 0.558823 | 8.3:-17141776 | None:intergenic |
| CAAACTAGCAGCATATTCTC+GGG | 0.558988 | 8.3:-17145980 | None:intergenic |
| AGTGCATCCAACAATAGAGA+TGG | 0.563875 | 8.3:-17141840 | None:intergenic |
| CATAGTGAATAATTTCCTCA+AGG | 0.564756 | 8.3:-17145948 | None:intergenic |
| CAATGACGCCTTGTTCTCCC+GGG | 0.564820 | 8.3:-17142537 | None:intergenic |
| AACATCCCAACTGGAGTATG+GGG | 0.571896 | 8.3:+17144489 | MS.gene48379:CDS |
| TATGCTTTCGGGCAAGAGGA+AGG | 0.576821 | 8.3:-17143539 | None:intergenic |
| GCAGAATGTTCGGAATCAGC+AGG | 0.577993 | 8.3:-17143576 | None:intergenic |
| GGATGCAGTCACTGTTGTCA+CGG | 0.582145 | 8.3:+17142661 | MS.gene48379:CDS |
| TGCACTAAGAACACCTGTCA+TGG | 0.586245 | 8.3:-17145179 | None:intergenic |
| TCTATTGTTCTGAAGTCACT+TGG | 0.588552 | 8.3:+17144915 | MS.gene48379:CDS |
| ATAGTGAATAATTTCCTCAA+GGG | 0.592245 | 8.3:-17145947 | None:intergenic |
| GTTGACCTCACCTTCCCTTG+AGG | 0.594034 | 8.3:+17145933 | MS.gene48379:CDS |
| ACGTTATGCTTTCGGGCAAG+AGG | 0.594225 | 8.3:-17143543 | None:intergenic |
| GTGCATCCAACAATAGAGAT+GGG | 0.604941 | 8.3:-17141839 | None:intergenic |
| CTAGGTAACAAGACTTGGGA+AGG | 0.608965 | 8.3:+17141809 | MS.gene48379:CDS |
| TGACAACAGTGACTGCATCC+GGG | 0.616685 | 8.3:-17142658 | None:intergenic |
| TGAATAATTTCCTCAAGGGA+AGG | 0.623968 | 8.3:-17145943 | None:intergenic |
| CTTCGCTTCAGTGTATCCAG+GGG | 0.627252 | 8.3:+17144074 | MS.gene48379:intron |
| AATTTCCTCAAGGGAAGGTG+AGG | 0.628083 | 8.3:-17145938 | None:intergenic |
| GCATAGGCAAGATTCATGGA+TGG | 0.630920 | 8.3:-17145136 | None:intergenic |
| GGTTAACAGAGGGTGCACTT+AGG | 0.633566 | 8.3:+17144095 | MS.gene48379:CDS |
| AGAACTAGGTAACAAGACTT+GGG | 0.640590 | 8.3:+17141805 | MS.gene48379:CDS |
| TGTATCCAGGGGTTAACAGA+GGG | 0.641373 | 8.3:+17144085 | MS.gene48379:CDS |
| CTGGGAATTTAGGAGTGCAG+CGG | 0.643916 | 8.3:-17141554 | None:intergenic |
| CATCAGGACCACCACCAGCA+TGG | 0.651055 | 8.3:+17141765 | MS.gene48379:CDS |
| GTGCAGCGGTTAGACTTGAG+GGG | 0.671763 | 8.3:-17141540 | None:intergenic |
| GTCATTCTAACTGCATCCGG+AGG | 0.671792 | 8.3:+17144121 | MS.gene48379:CDS |
| TGCAGCGGTTAGACTTGAGG+GGG | 0.676580 | 8.3:-17141539 | None:intergenic |
| GGGAGAACAAGGCGTCATTG+AGG | 0.682410 | 8.3:+17142540 | MS.gene48379:CDS |
| GTGTATCCAGGGGTTAACAG+AGG | 0.688037 | 8.3:+17144084 | MS.gene48379:intron |
| CTGTCATGGTTCCTCCAGCG+CGG | 0.688289 | 8.3:-17145165 | None:intergenic |
| AAAGAGACACTAATTGCCGG+AGG | 0.715097 | 8.3:+17143507 | MS.gene48379:CDS |
| TACTTGCAAAGATCAAGACG+AGG | 0.743866 | 8.3:-17144938 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATAGTTAAAATAATAAAA+AGG | + | chr8.3:17145511-17145530 | MS.gene48379:intron | 10.0% |
| !! | TTAAATTAAAAAGCAATAAA+AGG | - | chr8.3:17143876-17143895 | None:intergenic | 10.0% |
| !! | TTTAATAAAAAAGATATTAG+AGG | - | chr8.3:17144004-17144023 | None:intergenic | 10.0% |
| !! | ATTTAATGATTATCAAAAGA+CGG | - | chr8.3:17144771-17144790 | None:intergenic | 15.0% |
| !! | GTTAAAATAATAAAAAGGAT+TGG | + | chr8.3:17145516-17145535 | MS.gene48379:intron | 15.0% |
| !! | TACTAATATATTGCTTATAA+TGG | + | chr8.3:17143058-17143077 | MS.gene48379:intron | 15.0% |
| !! | TTAATTAATTGTATGGTTTA+AGG | + | chr8.3:17142333-17142352 | MS.gene48379:intron | 15.0% |
| !!! | TTAATTATTTTTTCCTTTCT+AGG | + | chr8.3:17144814-17144833 | MS.gene48379:intron | 15.0% |
| !!! | TTCATAATCATTTGATTTTT+AGG | + | chr8.3:17141671-17141690 | MS.gene48379:intron | 15.0% |
| !!! | TTTGAAGTTAATTAATTGTA+TGG | + | chr8.3:17142326-17142345 | MS.gene48379:intron | 15.0% |
| !! | AACAAATTTACTATATACTC+GGG | - | chr8.3:17144597-17144616 | None:intergenic | 20.0% |
| !! | ATATGTGAAATATATGAGTT+CGG | - | chr8.3:17143971-17143990 | None:intergenic | 20.0% |
| !! | ATATTTCACATATTATACTC+TGG | + | chr8.3:17143978-17143997 | MS.gene48379:intron | 20.0% |
| !! | CAATTCAAAATTTGATTACA+TGG | - | chr8.3:17142172-17142191 | None:intergenic | 20.0% |
| !! | GAACAAATTTACTATATACT+CGG | - | chr8.3:17144598-17144617 | None:intergenic | 20.0% |
| !! | TCATTAAATCCACATTTAAT+TGG | + | chr8.3:17145829-17145848 | MS.gene48379:intron | 20.0% |
| !! | TGGTAAAAATCAAAGTAATA+TGG | - | chr8.3:17145651-17145670 | None:intergenic | 20.0% |
| !! | TGTGGCAAAAAAATATTTAA+CGG | + | chr8.3:17143755-17143774 | MS.gene48379:intron | 20.0% |
| !! | TTAAAAACTTTGTATTTGCA+TGG | - | chr8.3:17145394-17145413 | None:intergenic | 20.0% |
| !! | TTATTACATGTAAAATTGCA+AGG | + | chr8.3:17142940-17142959 | MS.gene48379:intron | 20.0% |
| !! | TTCACAAAAAAAAAACATCA+TGG | - | chr8.3:17141609-17141628 | None:intergenic | 20.0% |
| !! | TTCTATTAATAAATGAAGCA+GGG | - | chr8.3:17144046-17144065 | None:intergenic | 20.0% |
| !! | TTTCTATTAATAAATGAAGC+AGG | - | chr8.3:17144047-17144066 | None:intergenic | 20.0% |
| !!! | ACCAGTCTTATTTTTATATT+AGG | + | chr8.3:17142970-17142989 | MS.gene48379:intron | 20.0% |
| !!! | ATAATCATTTGATTTTTAGG+TGG | + | chr8.3:17141674-17141693 | MS.gene48379:intron | 20.0% |
| !!! | ATATTTATTAGCATTTGTTG+TGG | + | chr8.3:17145603-17145622 | MS.gene48379:intron | 20.0% |
| !!! | CCAGTCTTATTTTTATATTA+GGG | + | chr8.3:17142971-17142990 | MS.gene48379:intron | 20.0% |
| !!! | GTTTTGTTTTTTATTTGACT+CGG | - | chr8.3:17142868-17142887 | None:intergenic | 20.0% |
| !!! | TAATAAAAAGGATTGGTTAT+TGG | + | chr8.3:17145523-17145542 | MS.gene48379:intron | 20.0% |
| !!! | TATTTTAACTATCAGTATGA+AGG | - | chr8.3:17145505-17145524 | None:intergenic | 20.0% |
| !!! | TTATCTTTTCTGAAATGAAA+AGG | + | chr8.3:17144229-17144248 | MS.gene48379:intron | 20.0% |
| !!! | TTTTTTTGTGGTAATTGAAT+AGG | + | chr8.3:17141944-17141963 | MS.gene48379:intron | 20.0% |
| ! | AAAAACATCATGGTACATAA+TGG | - | chr8.3:17141599-17141618 | None:intergenic | 25.0% |
| ! | AAATTATTCACTATGACTTG+TGG | + | chr8.3:17145956-17145975 | MS.gene48379:CDS | 25.0% |
| ! | AATATTCAGCACAATTCTTA+GGG | - | chr8.3:17145287-17145306 | None:intergenic | 25.0% |
| ! | ACATTGAAGGACTAATTTAA+CGG | + | chr8.3:17143206-17143225 | MS.gene48379:intron | 25.0% |
| ! | ATAGTGAATAATTTCCTCAA+GGG | - | chr8.3:17145950-17145969 | None:intergenic | 25.0% |
| ! | ATTCTTTACTTCACAATTTG+TGG | - | chr8.3:17143023-17143042 | None:intergenic | 25.0% |
| ! | ATTGAAGCACATTACTTATT+TGG | + | chr8.3:17144644-17144663 | MS.gene48379:CDS | 25.0% |
| ! | ATTGAATGTATGATTGATTG+TGG | - | chr8.3:17144704-17144723 | None:intergenic | 25.0% |
| ! | CAATCCTTTATACATTATCA+TGG | + | chr8.3:17144882-17144901 | MS.gene48379:CDS | 25.0% |
| ! | CCCTAATATAAAAATAAGAC+TGG | - | chr8.3:17142974-17142993 | None:intergenic | 25.0% |
| ! | GCAAAATAACCAATTAAATG+TGG | - | chr8.3:17145841-17145860 | None:intergenic | 25.0% |
| ! | TAGCTTATGAAAAACGATAT+TGG | - | chr8.3:17142609-17142628 | None:intergenic | 25.0% |
| ! | TATGTGAAATATATGAGTTC+GGG | - | chr8.3:17143970-17143989 | None:intergenic | 25.0% |
| ! | TCCATCATGATATGAAAAAT+TGG | - | chr8.3:17144316-17144335 | None:intergenic | 25.0% |
| ! | TCTACAACAAAACTAAGAAA+GGG | - | chr8.3:17144369-17144388 | None:intergenic | 25.0% |
| ! | TCTATTAATAAATGAAGCAG+GGG | - | chr8.3:17144045-17144064 | None:intergenic | 25.0% |
| ! | TGTGGCAAAAAAATATCTAA+CGG | - | chr8.3:17143907-17143926 | None:intergenic | 25.0% |
| ! | TTGGCTAATAAAAAAATGAG+AGG | - | chr8.3:17143443-17143462 | None:intergenic | 25.0% |
| !! | AATTATTCACTATGACTTGT+GGG | + | chr8.3:17145957-17145976 | MS.gene48379:CDS | 25.0% |
| !! | ATTTTCTTCAGTATGAACTA+TGG | - | chr8.3:17144990-17145009 | None:intergenic | 25.0% |
| !! | CATGATAATGTATAAAGGAT+TGG | - | chr8.3:17144884-17144903 | None:intergenic | 25.0% |
| !! | GTTTCTGTTTTCTTAAAACT+CGG | + | chr8.3:17142214-17142233 | MS.gene48379:intron | 25.0% |
| !! | TAGCTATTTGGATATTTTCA+AGG | + | chr8.3:17145873-17145892 | MS.gene48379:CDS | 25.0% |
| !! | TTTCTGTTTTCTTAAAACTC+GGG | + | chr8.3:17142215-17142234 | MS.gene48379:intron | 25.0% |
| !!! | AGTTTTAAGAAAACAGAAAC+TGG | - | chr8.3:17142214-17142233 | None:intergenic | 25.0% |
| !!! | ATTTGTTCTACTTATTTTGC+AGG | + | chr8.3:17144610-17144629 | MS.gene48379:intron | 25.0% |
| !!! | GCTTTGAAAAGAAAAGAAAA+TGG | + | chr8.3:17141701-17141720 | MS.gene48379:CDS | 25.0% |
| !!! | GGAAGTAAAACTTATTTTGA+AGG | - | chr8.3:17145344-17145363 | None:intergenic | 25.0% |
| !!! | GTATTTTTACGTTATGCTTT+CGG | - | chr8.3:17143554-17143573 | None:intergenic | 25.0% |
| !!! | TATTTTTACGTTATGCTTTC+GGG | - | chr8.3:17143553-17143572 | None:intergenic | 25.0% |
| !!! | TTTGTTCTACTTATTTTGCA+GGG | + | chr8.3:17144611-17144630 | MS.gene48379:intron | 25.0% |
| AAAAAGAAGCAACTGAACAT+GGG | - | chr8.3:17144196-17144215 | None:intergenic | 30.0% | |
| AAACATCAATGATAACAACC+AGG | + | chr8.3:17142910-17142929 | MS.gene48379:intron | 30.0% | |
| AACTAAGAAAGGGAAATTCA+AGG | - | chr8.3:17144359-17144378 | None:intergenic | 30.0% | |
| AACTATGGAAACGAAATTAG+GGG | - | chr8.3:17144975-17144994 | None:intergenic | 30.0% | |
| AATAAAGAGACACTAATTGC+CGG | + | chr8.3:17143504-17143523 | MS.gene48379:CDS | 30.0% | |
| AATATCCAAATAGCTAATCC+TGG | - | chr8.3:17145869-17145888 | None:intergenic | 30.0% | |
| AATTATCTTGAGGTTATGGT+GGG | - | chr8.3:17145369-17145388 | None:intergenic | 30.0% | |
| ACAAAAGAGAGTCGAAAAAA+GGG | - | chr8.3:17142725-17142744 | None:intergenic | 30.0% | |
| ACAGTCATGTAGATCATATA+GGG | - | chr8.3:17144392-17144411 | None:intergenic | 30.0% | |
| ACATGTAATAAGATAAGACC+TGG | - | chr8.3:17142931-17142950 | None:intergenic | 30.0% | |
| ACATTCAATGATTGAAACAC+AGG | + | chr8.3:17144715-17144734 | MS.gene48379:CDS | 30.0% | |
| ATCAGCAAAATAGACATTGA+AGG | + | chr8.3:17143193-17143212 | MS.gene48379:intron | 30.0% | |
| CAATATTCAGCACAATTCTT+AGG | - | chr8.3:17145288-17145307 | None:intergenic | 30.0% | |
| CATAGTGAATAATTTCCTCA+AGG | - | chr8.3:17145951-17145970 | None:intergenic | 30.0% | |
| CTGAAAAATAGCAGAATGTT+CGG | - | chr8.3:17143589-17143608 | None:intergenic | 30.0% | |
| GAAAGATGTTGAACAAAAAC+CGG | + | chr8.3:17142507-17142526 | MS.gene48379:CDS | 30.0% | |
| GAAATGAAAAGGAACCAAAA+GGG | + | chr8.3:17144240-17144259 | MS.gene48379:intron | 30.0% | |
| GAACTATGGAAACGAAATTA+GGG | - | chr8.3:17144976-17144995 | None:intergenic | 30.0% | |
| GCATATTCACATTTCAAACA+TGG | - | chr8.3:17145071-17145090 | None:intergenic | 30.0% | |
| GGATAATTATCTTGAGGTTA+TGG | - | chr8.3:17145373-17145392 | None:intergenic | 30.0% | |
| GGGAAAAAAGATTAATCTCT+TGG | + | chr8.3:17142397-17142416 | MS.gene48379:intron | 30.0% | |
| GTATGTAAAATAAACCTGAG+TGG | + | chr8.3:17144153-17144172 | MS.gene48379:intron | 30.0% | |
| GTCTACAACAAAACTAAGAA+AGG | - | chr8.3:17144370-17144389 | None:intergenic | 30.0% | |
| GTTTCGCTTCATGATTAATA+GGG | + | chr8.3:17144418-17144437 | MS.gene48379:intron | 30.0% | |
| TAAAAAGAAGCAACTGAACA+TGG | - | chr8.3:17144197-17144216 | None:intergenic | 30.0% | |
| TAACGGCTAAATGAATGTTT+GGG | + | chr8.3:17143223-17143242 | MS.gene48379:intron | 30.0% | |
| TAATTATCTTGAGGTTATGG+TGG | - | chr8.3:17145370-17145389 | None:intergenic | 30.0% | |
| TACAAAAGAGAGTCGAAAAA+AGG | - | chr8.3:17142726-17142745 | None:intergenic | 30.0% | |
| TACAGTCATGTAGATCATAT+AGG | - | chr8.3:17144393-17144412 | None:intergenic | 30.0% | |
| TCTTGGTATTTATGTTACAC+AGG | + | chr8.3:17142414-17142433 | MS.gene48379:intron | 30.0% | |
| TGAAATGAAAAGGAACCAAA+AGG | + | chr8.3:17144239-17144258 | MS.gene48379:intron | 30.0% | |
| TGAACTATGGAAACGAAATT+AGG | - | chr8.3:17144977-17144996 | None:intergenic | 30.0% | |
| TGAACTTGGTCATTAAATGT+TGG | + | chr8.3:17143092-17143111 | MS.gene48379:intron | 30.0% | |
| TGTTTCGCTTCATGATTAAT+AGG | + | chr8.3:17144417-17144436 | MS.gene48379:intron | 30.0% | |
| TTAACGGCTAAATGAATGTT+TGG | + | chr8.3:17143222-17143241 | MS.gene48379:intron | 30.0% | |
| TTAAGAAAACAGAAACTGGA+AGG | - | chr8.3:17142210-17142229 | None:intergenic | 30.0% | |
| TTCACACATTACAAACCTTT+GGG | + | chr8.3:17143161-17143180 | MS.gene48379:intron | 30.0% | |
| TTGAATATACTACCAACTGT+GGG | + | chr8.3:17142377-17142396 | MS.gene48379:intron | 30.0% | |
| TTGCATGGATAATTATCTTG+AGG | - | chr8.3:17145379-17145398 | None:intergenic | 30.0% | |
| TTTCTGTACAAGAAACTTCA+AGG | - | chr8.3:17142281-17142300 | None:intergenic | 30.0% | |
| TTTGAATATACTACCAACTG+TGG | + | chr8.3:17142376-17142395 | MS.gene48379:intron | 30.0% | |
| ! | AACCTTGAATGTGTCTTTTT+CGG | + | chr8.3:17143129-17143148 | MS.gene48379:intron | 30.0% |
| ! | AAGCACTGTCAATTTGAAAA+AGG | - | chr8.3:17145780-17145799 | None:intergenic | 30.0% |
| ! | GCCAATTTTTCATATCATGA+TGG | + | chr8.3:17144312-17144331 | MS.gene48379:intron | 30.0% |
| ! | TCAGTTGCTTCTTTTTATGT+TGG | + | chr8.3:17144200-17144219 | MS.gene48379:intron | 30.0% |
| ! | TGAAAATGAGTCGGTATTTT+GGG | - | chr8.3:17145419-17145438 | None:intergenic | 30.0% |
| ! | TGTTTGAAATGTGAATATGC+AGG | + | chr8.3:17145071-17145090 | MS.gene48379:intron | 30.0% |
| ! | TTTTTATTAGCCAACAGTTG+CGG | + | chr8.3:17143449-17143468 | MS.gene48379:intron | 30.0% |
| !! | CACAAATCCATTTTAAAGAG+AGG | - | chr8.3:17141921-17141940 | None:intergenic | 30.0% |
| !! | CATTCTAAAGCATTTAGGAT+GGG | + | chr8.3:17142240-17142259 | MS.gene48379:intron | 30.0% |
| !! | TCATTCTAAAGCATTTAGGA+TGG | + | chr8.3:17142239-17142258 | MS.gene48379:intron | 30.0% |
| !! | TGGCTTATATATTTCGAGTT+CGG | + | chr8.3:17143675-17143694 | MS.gene48379:intron | 30.0% |
| !! | TTTGGATATTTTCAAGGTTG+TGG | + | chr8.3:17145879-17145898 | MS.gene48379:CDS | 30.0% |
| !!! | GGATTTGTGTTGTTTTTTTG+TGG | + | chr8.3:17141932-17141951 | MS.gene48379:intron | 30.0% |
| !!! | TTAATCTTTTTTCCCACAGT+TGG | - | chr8.3:17142392-17142411 | None:intergenic | 30.0% |
| AACATGCATCTGTATTCAGT+AGG | + | chr8.3:17145576-17145595 | MS.gene48379:intron | 35.0% | |
| AACCGAAAAAGACACATTCA+AGG | - | chr8.3:17143134-17143153 | None:intergenic | 35.0% | |
| AACGGCTAAATGAATGTTTG+GGG | + | chr8.3:17143224-17143243 | MS.gene48379:intron | 35.0% | |
| AAGAAAGAACCTGGGAATTT+AGG | - | chr8.3:17141567-17141586 | None:intergenic | 35.0% | |
| AAGCTCCATTTACTCCATTT+AGG | + | chr8.3:17143716-17143735 | MS.gene48379:intron | 35.0% | |
| AATTGAATAGGTGACAGGAA+AGG | + | chr8.3:17141956-17141975 | MS.gene48379:intron | 35.0% | |
| ACATCTTTCAGTTTCTCAAC+AGG | - | chr8.3:17144449-17144468 | None:intergenic | 35.0% | |
| ACATGCATCTGTATTCAGTA+GGG | + | chr8.3:17145577-17145596 | MS.gene48379:intron | 35.0% | |
| ACTATGGAAACGAAATTAGG+GGG | - | chr8.3:17144974-17144993 | None:intergenic | 35.0% | |
| AGAACAGATGAATCCTAGAA+AGG | - | chr8.3:17144830-17144849 | None:intergenic | 35.0% | |
| AGAACTAGGTAACAAGACTT+GGG | + | chr8.3:17141805-17141824 | MS.gene48379:CDS | 35.0% | |
| AGCCAACACAACATAGTATA+AGG | - | chr8.3:17144747-17144766 | None:intergenic | 35.0% | |
| AGCTCCATTTACTCCATTTA+GGG | + | chr8.3:17143717-17143736 | MS.gene48379:intron | 35.0% | |
| AGTGTCTACAAAACCATACA+GGG | - | chr8.3:17142049-17142068 | None:intergenic | 35.0% | |
| ATGACCAAGTTCATGCAATA+TGG | - | chr8.3:17143085-17143104 | None:intergenic | 35.0% | |
| ATGCATTAAAACATCCCAAC+TGG | + | chr8.3:17144480-17144499 | MS.gene48379:CDS | 35.0% | |
| ATGCTCCATTTACTCCATTT+AGG | - | chr8.3:17143946-17143965 | None:intergenic | 35.0% | |
| CAAACCCTAAATGGAGTAAA+TGG | + | chr8.3:17143938-17143957 | MS.gene48379:intron | 35.0% | |
| CAAACCCTAAATGGAGTAAA+TGG | - | chr8.3:17143957-17143938 | None:intergenic | 35.0% | |
| CAGTCATAATAGTACACGAA+TGG | - | chr8.3:17143282-17143301 | None:intergenic | 35.0% | |
| CATTACTCTTCTGATAGATC+AGG | + | chr8.3:17142129-17142148 | MS.gene48379:CDS | 35.0% | |
| GAAAATAGACAGATTCACCT+AGG | + | chr8.3:17145004-17145023 | MS.gene48379:intron | 35.0% | |
| GACAGAAAATCAAACATTGC+AGG | - | chr8.3:17141998-17142017 | None:intergenic | 35.0% | |
| GACCTTATACTATGTTGTGT+TGG | + | chr8.3:17144742-17144761 | MS.gene48379:intron | 35.0% | |
| GATGGATACTTAATGTTGTC+AGG | - | chr8.3:17145121-17145140 | None:intergenic | 35.0% | |
| GCTATTGTTTGTGTATTCTC+AGG | + | chr8.3:17142625-17142644 | MS.gene48379:intron | 35.0% | |
| GCTTCATGATTAATAGGGAT+TGG | + | chr8.3:17144423-17144442 | MS.gene48379:intron | 35.0% | |
| GGCAATTAGTGTCTCTTTAT+TGG | - | chr8.3:17143505-17143524 | None:intergenic | 35.0% | |
| GTAATATGGCCACACAATTA+AGG | - | chr8.3:17145637-17145656 | None:intergenic | 35.0% | |
| GTAGTGAACTATAGATACTC+TGG | + | chr8.3:17143655-17143674 | MS.gene48379:intron | 35.0% | |
| GTCTTGAATCCTTAATTGTG+TGG | + | chr8.3:17145625-17145644 | MS.gene48379:intron | 35.0% | |
| GTGTACTATTATGACTGATG+TGG | + | chr8.3:17143285-17143304 | MS.gene48379:intron | 35.0% | |
| GTTCACACATTACAAACCTT+TGG | + | chr8.3:17143160-17143179 | MS.gene48379:intron | 35.0% | |
| GTTGTGATATGAGAGAAGAA+TGG | - | chr8.3:17143851-17143870 | None:intergenic | 35.0% | |
| TAAATGGAGCTTAGCCTAAA+TGG | - | chr8.3:17143708-17143727 | None:intergenic | 35.0% | |
| TAGTGTCTACAAAACCATAC+AGG | - | chr8.3:17142050-17142069 | None:intergenic | 35.0% | |
| TATGGGGAAAAAGATAACTG+TGG | + | chr8.3:17144505-17144524 | MS.gene48379:CDS | 35.0% | |
| TCACAAACCTGAAAATGAGT+CGG | - | chr8.3:17145428-17145447 | None:intergenic | 35.0% | |
| TCATCTGTTCTTGCACAATT+GGG | + | chr8.3:17144839-17144858 | MS.gene48379:CDS | 35.0% | |
| TGAATAATTTCCTCAAGGGA+AGG | - | chr8.3:17145946-17145965 | None:intergenic | 35.0% | |
| TGACCAAGTTCATGCAATAT+GGG | - | chr8.3:17143084-17143103 | None:intergenic | 35.0% | |
| TGCTCCATTTACTCCATTTA+GGG | - | chr8.3:17143945-17143964 | None:intergenic | 35.0% | |
| TGTCAATTTGAAAAAGGAGC+CGG | - | chr8.3:17145774-17145793 | None:intergenic | 35.0% | |
| TTCATCTGTTCTTGCACAAT+TGG | + | chr8.3:17144838-17144857 | MS.gene48379:CDS | 35.0% | |
| TTTCTAACAGCAACAAGTTG+TGG | - | chr8.3:17142454-17142473 | None:intergenic | 35.0% | |
| ! | ATGTATCATTTTCCCCTGTA+TGG | + | chr8.3:17142033-17142052 | MS.gene48379:intron | 35.0% |
| ! | CAACAATAGAGATGGGTTTA+GGG | - | chr8.3:17141835-17141854 | None:intergenic | 35.0% |
| ! | CAGGCCATGATAATGTATAA+AGG | - | chr8.3:17144889-17144908 | None:intergenic | 35.0% |
| ! | CATTTACTCCATTTAGGGTT+TGG | + | chr8.3:17143722-17143741 | MS.gene48379:intron | 35.0% |
| ! | CATTTACTCCATTTAGGGTT+TGG | - | chr8.3:17143741-17143722 | None:intergenic | 35.0% |
| ! | CTGAAAATGAGTCGGTATTT+TGG | - | chr8.3:17145420-17145439 | None:intergenic | 35.0% |
| ! | CTTCATGCTTCATAGGTTTT+AGG | + | chr8.3:17145797-17145816 | MS.gene48379:intron | 35.0% |
| ! | TATGTCTTTTCCAGCTTCTA+TGG | - | chr8.3:17143475-17143494 | None:intergenic | 35.0% |
| ! | TGTAAAGAACTGAAAAGTGC+TGG | - | chr8.3:17145671-17145690 | None:intergenic | 35.0% |
| !! | AAGTCTTGTTACCTAGTTCT+GGG | - | chr8.3:17141805-17141824 | None:intergenic | 35.0% |
| !! | CTCTGCTACACTTTTTAACA+AGG | + | chr8.3:17144529-17144548 | MS.gene48379:CDS | 35.0% |
| !! | GGCTTATATATTTCGAGTTC+GGG | + | chr8.3:17143676-17143695 | MS.gene48379:intron | 35.0% |
| !! | GGGTTCATTCTAAAGCATTT+AGG | + | chr8.3:17142235-17142254 | MS.gene48379:intron | 35.0% |
| !! | TAGGGCATTGATAGTTTGAA+AGG | + | chr8.3:17142989-17143008 | MS.gene48379:intron | 35.0% |
| !! | TCTATTGTTCTGAAGTCACT+TGG | + | chr8.3:17144915-17144934 | MS.gene48379:CDS | 35.0% |
| !! | TGTTTCCAGGATTAGCTATT+TGG | + | chr8.3:17145861-17145880 | MS.gene48379:intron | 35.0% |
| !!! | CAAAATACCGACTCATTTTC+AGG | + | chr8.3:17145418-17145437 | MS.gene48379:intron | 35.0% |
| !!! | CGAACATTCTGCTATTTTTC+AGG | + | chr8.3:17143587-17143606 | MS.gene48379:CDS | 35.0% |
| !!! | GTTGGGATGTTTTAATGCAT+CGG | - | chr8.3:17144480-17144499 | None:intergenic | 35.0% |
| !!! | TTGGTTATTTTGCTGTTTCC+AGG | + | chr8.3:17145848-17145867 | MS.gene48379:intron | 35.0% |
| AAAACATCCCAACTGGAGTA+TGG | + | chr8.3:17144487-17144506 | MS.gene48379:CDS | 40.0% | |
| AAACATCCCAACTGGAGTAT+GGG | + | chr8.3:17144488-17144507 | MS.gene48379:CDS | 40.0% | |
| ACTGAAGAGAAGAAAGAACC+TGG | - | chr8.3:17141576-17141595 | None:intergenic | 40.0% | |
| ACTGCAAAAACTCTATGCCT+AGG | - | chr8.3:17145024-17145043 | None:intergenic | 40.0% | |
| AGCTGGAAAAGACATAGCTT+TGG | + | chr8.3:17143479-17143498 | MS.gene48379:CDS | 40.0% | |
| AGGAACCAAAAGGGAATGTA+TGG | + | chr8.3:17144249-17144268 | MS.gene48379:intron | 40.0% | |
| AGTGCATCCAACAATAGAGA+TGG | - | chr8.3:17141843-17141862 | None:intergenic | 40.0% | |
| ATCTCTATTGTTGGATGCAC+TGG | + | chr8.3:17141842-17141861 | MS.gene48379:CDS | 40.0% | |
| CAAACTAGCAGCATATTCTC+GGG | - | chr8.3:17145983-17146002 | None:intergenic | 40.0% | |
| CAGAACTAGGTAACAAGACT+TGG | + | chr8.3:17141804-17141823 | MS.gene48379:CDS | 40.0% | |
| CATCTGTTCTTGCACAATTG+GGG | + | chr8.3:17144840-17144859 | MS.gene48379:CDS | 40.0% | |
| CCAAGCAAAACATGACCATT+AGG | + | chr8.3:17145704-17145723 | MS.gene48379:intron | 40.0% | |
| CCTAAACCCATCTCTATTGT+TGG | + | chr8.3:17141833-17141852 | MS.gene48379:CDS | 40.0% | |
| CGTCTTGATCTTTGCAAGTA+CGG | + | chr8.3:17144941-17144960 | MS.gene48379:intron | 40.0% | |
| CTGAAGAGAAGAAAGAACCT+GGG | - | chr8.3:17141575-17141594 | None:intergenic | 40.0% | |
| GAAATGTGAATATGCAGGCT+TGG | + | chr8.3:17145076-17145095 | MS.gene48379:intron | 40.0% | |
| GAACATGACACAGTTCCTAA+TGG | - | chr8.3:17145722-17145741 | None:intergenic | 40.0% | |
| GACTGATGTGGTATCTTTCA+AGG | + | chr8.3:17143297-17143316 | MS.gene48379:intron | 40.0% | |
| GAGTCGAAAAAAGGGAAAAG+AGG | - | chr8.3:17142717-17142736 | None:intergenic | 40.0% | |
| GCAAACTAGCAGCATATTCT+CGG | - | chr8.3:17145984-17146003 | None:intergenic | 40.0% | |
| GCGACAACTCTAAACTTATC+TGG | - | chr8.3:17142091-17142110 | None:intergenic | 40.0% | |
| GCTGATTGAATTAGTCCCAA+AGG | - | chr8.3:17143179-17143198 | None:intergenic | 40.0% | |
| GTCAATTTGAAAAAGGAGCC+GGG | - | chr8.3:17145773-17145792 | None:intergenic | 40.0% | |
| GTGCATCCAACAATAGAGAT+GGG | - | chr8.3:17141842-17141861 | None:intergenic | 40.0% | |
| GTGGTAATTGAATAGGTGAC+AGG | + | chr8.3:17141951-17141970 | MS.gene48379:intron | 40.0% | |
| GTGTCTACAAAACCATACAG+GGG | - | chr8.3:17142048-17142067 | None:intergenic | 40.0% | |
| TACTTGCAAAGATCAAGACG+AGG | - | chr8.3:17144941-17144960 | None:intergenic | 40.0% | |
| TCAGAACAATAGACTCTGTC+AGG | - | chr8.3:17144908-17144927 | None:intergenic | 40.0% | |
| TCTTGCATCCAAACCCTAAA+TGG | + | chr8.3:17143929-17143948 | MS.gene48379:intron | 40.0% | |
| TCTTGCATCCAAACCCTAAA+TGG | - | chr8.3:17143948-17143929 | None:intergenic | 40.0% | |
| ! | AAGATTCTGGGAGAGTCAAA+TGG | - | chr8.3:17145460-17145479 | None:intergenic | 40.0% |
| ! | CAAGGTTTTCCACGATCAAT+GGG | - | chr8.3:17144341-17144360 | None:intergenic | 40.0% |
| ! | CCAACAATAGAGATGGGTTT+AGG | - | chr8.3:17141836-17141855 | None:intergenic | 40.0% |
| ! | CCTAATGGTCATGTTTTGCT+TGG | - | chr8.3:17145707-17145726 | None:intergenic | 40.0% |
| ! | CTGCAGTCCTCTCTTTAAAA+TGG | + | chr8.3:17141911-17141930 | MS.gene48379:intron | 40.0% |
| ! | TCAAGGTTTTCCACGATCAA+TGG | - | chr8.3:17144342-17144361 | None:intergenic | 40.0% |
| ! | TTTTTCCCCATACTCCAGTT+GGG | - | chr8.3:17144497-17144516 | None:intergenic | 40.0% |
| !! | CAAGTCTTGTTACCTAGTTC+TGG | - | chr8.3:17141806-17141825 | None:intergenic | 40.0% |
| !! | TACATACCTAAAAGCACCTC+CGG | - | chr8.3:17144140-17144159 | None:intergenic | 40.0% |
| AAACCGGACTTAAGTTCAGC+TGG | - | chr8.3:17141510-17141529 | None:intergenic | 45.0% | |
| AAAGAGACACTAATTGCCGG+AGG | + | chr8.3:17143507-17143526 | MS.gene48379:CDS | 45.0% | |
| AACATCCCAACTGGAGTATG+GGG | + | chr8.3:17144489-17144508 | MS.gene48379:CDS | 45.0% | |
| AATTTCCTCAAGGGAAGGTG+AGG | - | chr8.3:17145941-17145960 | None:intergenic | 45.0% | |
| ACAAAAACCGGAGATCATCC+CGG | + | chr8.3:17142519-17142538 | MS.gene48379:CDS | 45.0% | |
| ACTGTTGTCACGGGAATAGT+AGG | + | chr8.3:17142671-17142690 | MS.gene48379:CDS | 45.0% | |
| AGCAACTGAACATGGGAAAC+AGG | - | chr8.3:17144189-17144208 | None:intergenic | 45.0% | |
| AGCAGCATAGGCAAGATTCA+TGG | - | chr8.3:17145143-17145162 | None:intergenic | 45.0% | |
| AGTTCGGGTATGCTCCATTT+AGG | + | chr8.3:17143691-17143710 | MS.gene48379:intron | 45.0% | |
| ATGAATCTTGCCTATGCTGC+TGG | + | chr8.3:17145142-17145161 | MS.gene48379:CDS | 45.0% | |
| CGAGTCATTCTAACTGCATC+CGG | + | chr8.3:17144118-17144137 | MS.gene48379:CDS | 45.0% | |
| CTAGGTAACAAGACTTGGGA+AGG | + | chr8.3:17141809-17141828 | MS.gene48379:CDS | 45.0% | |
| GACAGTGCTTCATGCTTCAT+AGG | + | chr8.3:17145790-17145809 | MS.gene48379:intron | 45.0% | |
| GCATAGGCAAGATTCATGGA+TGG | - | chr8.3:17145139-17145158 | None:intergenic | 45.0% | |
| TCTCCAGCTGAACTTAAGTC+CGG | + | chr8.3:17141504-17141523 | MS.gene48379:CDS | 45.0% | |
| TCTTCGCTTCAGTGTATCCA+GGG | + | chr8.3:17144073-17144092 | MS.gene48379:intron | 45.0% | |
| TGATGGAAACCCATTGATCG+TGG | + | chr8.3:17144329-17144348 | MS.gene48379:intron | 45.0% | |
| TGCACTAAGAACACCTGTCA+TGG | - | chr8.3:17145182-17145201 | None:intergenic | 45.0% | |
| TGCATCTGTATTCAGTAGGG+TGG | + | chr8.3:17145580-17145599 | MS.gene48379:intron | 45.0% | |
| TGGCCCATATTGCATGAACT+TGG | + | chr8.3:17143078-17143097 | MS.gene48379:intron | 45.0% | |
| TGTATCCAGGGGTTAACAGA+GGG | + | chr8.3:17144085-17144104 | MS.gene48379:CDS | 45.0% | |
| TGTTCAGTGCAGTCAACATC+AGG | + | chr8.3:17141749-17141768 | MS.gene48379:CDS | 45.0% | |
| TTCTTCGCTTCAGTGTATCC+AGG | + | chr8.3:17144072-17144091 | MS.gene48379:intron | 45.0% | |
| ! | AGGATTGGCAAACGCATATC+AGG | - | chr8.3:17144869-17144888 | None:intergenic | 45.0% |
| ! | ATCTTGAGGTTATGGTGGGA+TGG | - | chr8.3:17145365-17145384 | None:intergenic | 45.0% |
| ! | CTTTTTCCCCATACTCCAGT+TGG | - | chr8.3:17144498-17144517 | None:intergenic | 45.0% |
| ! | GTGTGCCATACATTCCCTTT+TGG | - | chr8.3:17144257-17144276 | None:intergenic | 45.0% |
| !! | CACTGGTTCAATTGGAACTC+AGG | + | chr8.3:17141859-17141878 | MS.gene48379:CDS | 45.0% |
| !! | GTTGGATGCACTGGTTCAAT+TGG | + | chr8.3:17141851-17141870 | MS.gene48379:CDS | 45.0% |
| !! | TATATATATATATATATATG+AGG | - | chr8.3:17145553-17145572 | None:intergenic | 5.0% |
| ACGTTATGCTTTCGGGCAAG+AGG | - | chr8.3:17143546-17143565 | None:intergenic | 50.0% | |
| AGGAAGGACAAAAGGACCTC+CGG | - | chr8.3:17143526-17143545 | None:intergenic | 50.0% | |
| AGTAGGCTGTGCAGGACTAA+AGG | + | chr8.3:17142688-17142707 | MS.gene48379:CDS | 50.0% | |
| AGTGCAGCGGTTAGACTTGA+GGG | - | chr8.3:17141544-17141563 | None:intergenic | 50.0% | |
| CAAAAACCGGAGATCATCCC+GGG | + | chr8.3:17142520-17142539 | MS.gene48379:CDS | 50.0% | |
| CTGTTCTTGCACAATTGGGG+TGG | + | chr8.3:17144843-17144862 | MS.gene48379:CDS | 50.0% | |
| CTTCGCTTCAGTGTATCCAG+GGG | + | chr8.3:17144074-17144093 | MS.gene48379:intron | 50.0% | |
| GAGGGGGTCAGTGAAAAAAC+CGG | - | chr8.3:17141526-17141545 | None:intergenic | 50.0% | |
| GATGCAGTCACTGTTGTCAC+GGG | + | chr8.3:17142662-17142681 | MS.gene48379:CDS | 50.0% | |
| GCAGAATGTTCGGAATCAGC+AGG | - | chr8.3:17143579-17143598 | None:intergenic | 50.0% | |
| GGATGCAGTCACTGTTGTCA+CGG | + | chr8.3:17142661-17142680 | MS.gene48379:CDS | 50.0% | |
| GGGTTTGGATGCAAGACATG+TGG | + | chr8.3:17143737-17143756 | MS.gene48379:intron | 50.0% | |
| GGGTTTGGATGCAAGACATG+TGG | - | chr8.3:17143756-17143737 | None:intergenic | 50.0% | |
| GTCATTCTAACTGCATCCGG+AGG | + | chr8.3:17144121-17144140 | MS.gene48379:CDS | 50.0% | |
| GTGACAACAGTGACTGCATC+CGG | - | chr8.3:17142662-17142681 | None:intergenic | 50.0% | |
| GTGTATCCAGGGGTTAACAG+AGG | + | chr8.3:17144084-17144103 | MS.gene48379:intron | 50.0% | |
| TATGCTTTCGGGCAAGAGGA+AGG | - | chr8.3:17143542-17143561 | None:intergenic | 50.0% | |
| TGACAACAGTGACTGCATCC+GGG | - | chr8.3:17142661-17142680 | None:intergenic | 50.0% | |
| TGCGTGTAGATGCATGCACA+CGG | - | chr8.3:17142783-17142802 | None:intergenic | 50.0% | |
| ! | AGAACAAGGCGTCATTGAGG+TGG | + | chr8.3:17142543-17142562 | MS.gene48379:intron | 50.0% |
| ! | CTGGGAATTTAGGAGTGCAG+CGG | - | chr8.3:17141557-17141576 | None:intergenic | 50.0% |
| ! | GGTTAACAGAGGGTGCACTT+AGG | + | chr8.3:17144095-17144114 | MS.gene48379:CDS | 50.0% |
| ! | TCAATGACGCCTTGTTCTCC+CGG | - | chr8.3:17142541-17142560 | None:intergenic | 50.0% |
| !! | CAGGAAAAGTGCTACCACTC+AGG | - | chr8.3:17144170-17144189 | None:intergenic | 50.0% |
| ACAGTTGCGGCCATAGAAGC+TGG | + | chr8.3:17143462-17143481 | MS.gene48379:CDS | 55.0% | |
| ACGGGAATAGTAGGCTGTGC+AGG | + | chr8.3:17142680-17142699 | MS.gene48379:CDS | 55.0% | |
| AGAGTTGTCGCACTTGCAGC+TGG | + | chr8.3:17142100-17142119 | MS.gene48379:CDS | 55.0% | |
| CGCTGCACTCCTAAATTCCC+AGG | + | chr8.3:17141555-17141574 | MS.gene48379:CDS | 55.0% | |
| CGGGCAAGAGGAAGGACAAA+AGG | - | chr8.3:17143534-17143553 | None:intergenic | 55.0% | |
| GAGATCATCCCGGGAGAACA+AGG | + | chr8.3:17142529-17142548 | MS.gene48379:CDS | 55.0% | |
| GAGTGCAGCGGTTAGACTTG+AGG | - | chr8.3:17141545-17141564 | None:intergenic | 55.0% | |
| GCTTCTATGGCCGCAACTGT+TGG | - | chr8.3:17143462-17143481 | None:intergenic | 55.0% | |
| GGACGAGCAATCCCAGAACT+AGG | + | chr8.3:17141791-17141810 | MS.gene48379:CDS | 55.0% | |
| GTGCAGCGGTTAGACTTGAG+GGG | - | chr8.3:17141543-17141562 | None:intergenic | 55.0% | |
| GTTGACCTCACCTTCCCTTG+AGG | + | chr8.3:17145933-17145952 | MS.gene48379:CDS | 55.0% | |
| TGAAAAAGGAGCCGGGCACA+CGG | - | chr8.3:17145766-17145785 | None:intergenic | 55.0% | |
| TGCAGCGGTTAGACTTGAGG+GGG | - | chr8.3:17141542-17141561 | None:intergenic | 55.0% | |
| TGTTCTCCCGGGATGATCTC+CGG | - | chr8.3:17142529-17142548 | None:intergenic | 55.0% | |
| ! | CAATGACGCCTTGTTCTCCC+GGG | - | chr8.3:17142540-17142559 | None:intergenic | 55.0% |
| ! | GGGAGAACAAGGCGTCATTG+AGG | + | chr8.3:17142540-17142559 | MS.gene48379:CDS | 55.0% |
| ! | TTCTCAGGTTGCACGTCACC+CGG | + | chr8.3:17142640-17142659 | MS.gene48379:intron | 55.0% |
| !! | AGTTCTGGGATTGCTCGTCC+TGG | - | chr8.3:17141791-17141810 | None:intergenic | 55.0% |
| !!! | CTGCATCCGGAGGTGCTTTT+AGG | + | chr8.3:17144131-17144150 | MS.gene48379:CDS | 55.0% |
| ATTGCTCGTCCTGGCCATGC+TGG | - | chr8.3:17141782-17141801 | None:intergenic | 60.0% | |
| CATCAGGACCACCACCAGCA+TGG | + | chr8.3:17141765-17141784 | MS.gene48379:CDS | 60.0% | |
| CTGTCATGGTTCCTCCAGCG+CGG | - | chr8.3:17145168-17145187 | None:intergenic | 60.0% | |
| GTGCACCCTCTGTTAACCCC+TGG | - | chr8.3:17144093-17144112 | None:intergenic | 60.0% | |
| TGACACATGTGCCGTGTGCC+CGG | + | chr8.3:17145752-17145771 | MS.gene48379:intron | 60.0% | |
| CGCGCTGGAGGAACCATGAC+AGG | + | chr8.3:17145166-17145185 | MS.gene48379:CDS | 65.0% | |
| CGTCCTGGCCATGCTGGTGG+TGG | - | chr8.3:17141776-17141795 | None:intergenic | 70.0% | |
| GCTCGTCCTGGCCATGCTGG+TGG | - | chr8.3:17141779-17141798 | None:intergenic | 70.0% | |
| GGACCACCACCAGCATGGCC+AGG | + | chr8.3:17141770-17141789 | MS.gene48379:CDS | 70.0% | |
| TATGCTGCTGGCCGCGCTGG+AGG | + | chr8.3:17145154-17145173 | MS.gene48379:CDS | 70.0% | |
| TCCAGCGCGGCCAGCAGCAT+AGG | - | chr8.3:17145155-17145174 | None:intergenic | 70.0% | |
| GCCTATGCTGCTGGCCGCGC+TGG | + | chr8.3:17145151-17145170 | MS.gene48379:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 17141486 | 17146038 | 17141486 | ID=MS.gene48379 |
| chr8.3 | mRNA | 17141486 | 17146038 | 17141486 | ID=MS.gene48379.t1;Parent=MS.gene48379 |
| chr8.3 | exon | 17141486 | 17141576 | 17141486 | ID=MS.gene48379.t1.exon1;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17141486 | 17141576 | 17141486 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17141693 | 17141880 | 17141693 | ID=MS.gene48379.t1.exon2;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17141693 | 17141880 | 17141693 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17142064 | 17142150 | 17142064 | ID=MS.gene48379.t1.exon3;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17142064 | 17142150 | 17142064 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17142436 | 17142561 | 17142436 | ID=MS.gene48379.t1.exon4;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17142436 | 17142561 | 17142436 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17142647 | 17142709 | 17142647 | ID=MS.gene48379.t1.exon5;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17142647 | 17142709 | 17142647 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17143459 | 17143608 | 17143459 | ID=MS.gene48379.t1.exon6;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17143459 | 17143608 | 17143459 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17144085 | 17144152 | 17144085 | ID=MS.gene48379.t1.exon7;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17144085 | 17144152 | 17144085 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17144439 | 17144550 | 17144439 | ID=MS.gene48379.t1.exon8;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17144439 | 17144550 | 17144439 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17144632 | 17144736 | 17144632 | ID=MS.gene48379.t1.exon9;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17144632 | 17144736 | 17144632 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17144836 | 17144957 | 17144836 | ID=MS.gene48379.t1.exon10;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17144836 | 17144957 | 17144836 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17145093 | 17145239 | 17145093 | ID=MS.gene48379.t1.exon11;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17145093 | 17145239 | 17145093 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| chr8.3 | exon | 17145870 | 17146038 | 17145870 | ID=MS.gene48379.t1.exon12;Parent=MS.gene48379.t1 |
| chr8.3 | CDS | 17145870 | 17146038 | 17145870 | ID=cds.MS.gene48379.t1;Parent=MS.gene48379.t1 |
| Gene Sequence |
| Protein sequence |
