Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48739.t1 | AES87618.2 | 98.1 | 741 | 14 | 0 | 1 | 741 | 50 | 790 | 0.00E+00 | 1410.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48739.t1 | O81122 | 84.2 | 741 | 116 | 1 | 2 | 741 | 1 | 741 | 0.0e+00 | 1219.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48739.t1 | G7JKV2 | 98.1 | 741 | 14 | 0 | 1 | 741 | 50 | 790 | 0.0e+00 | 1410.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene48739.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene48739 | MS.gene068602 | PPI |
| MS.gene062402 | MS.gene48739 | PPI |
| MS.gene74115 | MS.gene48739 | PPI |
| MS.gene48739 | MS.gene068604 | PPI |
| MS.gene48739 | MS.gene053206 | PPI |
| MS.gene48739 | MS.gene027810 | PPI |
| MS.gene044915 | MS.gene48739 | PPI |
| MS.gene48739 | MS.gene070887 | PPI |
| MS.gene48739 | MS.gene97518 | PPI |
| MS.gene48739 | MS.gene069138 | PPI |
| MS.gene027808 | MS.gene48739 | PPI |
| MS.gene65397 | MS.gene48739 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48739.t1 | MTR_4g031150 | 98.111 | 741 | 14 | 0 | 1 | 741 | 50 | 790 | 0.0 | 1501 |
| MS.gene48739.t1 | MTR_7g109150 | 74.080 | 625 | 158 | 2 | 1 | 623 | 1 | 623 | 0.0 | 908 |
| MS.gene48739.t1 | MTR_1g073840 | 41.711 | 748 | 403 | 18 | 5 | 739 | 29 | 756 | 6.97e-175 | 520 |
| MS.gene48739.t1 | MTR_7g116330 | 39.386 | 749 | 413 | 16 | 5 | 734 | 34 | 760 | 3.20e-163 | 490 |
| MS.gene48739.t1 | MTR_1g079790 | 37.683 | 751 | 430 | 18 | 3 | 734 | 26 | 757 | 1.14e-154 | 468 |
| MS.gene48739.t1 | MTR_1g044210 | 37.281 | 743 | 444 | 13 | 5 | 735 | 28 | 760 | 8.68e-151 | 458 |
| MS.gene48739.t1 | MTR_1g079790 | 38.704 | 571 | 328 | 11 | 3 | 561 | 26 | 586 | 1.75e-119 | 372 |
| MS.gene48739.t1 | MTR_3g085130 | 28.729 | 362 | 211 | 7 | 335 | 655 | 438 | 793 | 3.02e-34 | 141 |
| MS.gene48739.t1 | MTR_3g085130 | 28.729 | 362 | 211 | 7 | 335 | 655 | 228 | 583 | 6.32e-34 | 139 |
| MS.gene48739.t1 | MTR_8g080770 | 29.155 | 367 | 215 | 8 | 335 | 663 | 383 | 742 | 6.58e-34 | 140 |
| MS.gene48739.t1 | MTR_8g080770 | 33.884 | 121 | 69 | 4 | 614 | 724 | 840 | 959 | 1.92e-11 | 68.2 |
| MS.gene48739.t1 | MTR_8g080770 | 29.155 | 367 | 215 | 8 | 335 | 663 | 274 | 633 | 7.64e-34 | 139 |
| MS.gene48739.t1 | MTR_8g080770 | 33.884 | 121 | 69 | 4 | 614 | 724 | 731 | 850 | 2.08e-11 | 68.2 |
| MS.gene48739.t1 | MTR_3g105590 | 30.409 | 342 | 176 | 9 | 300 | 600 | 331 | 651 | 1.07e-32 | 136 |
| MS.gene48739.t1 | MTR_5g022470 | 30.976 | 297 | 177 | 6 | 334 | 605 | 499 | 792 | 7.47e-30 | 127 |
| MS.gene48739.t1 | MTR_5g022470 | 30.976 | 297 | 177 | 6 | 334 | 605 | 499 | 792 | 9.15e-30 | 127 |
| MS.gene48739.t1 | MTR_8g075340 | 31.698 | 265 | 158 | 3 | 334 | 575 | 461 | 725 | 9.88e-29 | 124 |
| MS.gene48739.t1 | MTR_5g097410 | 28.571 | 343 | 200 | 5 | 338 | 641 | 611 | 947 | 1.92e-28 | 123 |
| MS.gene48739.t1 | MTR_8g106150 | 29.111 | 371 | 199 | 8 | 338 | 651 | 377 | 740 | 5.12e-28 | 121 |
| MS.gene48739.t1 | MTR_8g106150 | 29.111 | 371 | 199 | 8 | 338 | 651 | 134 | 497 | 9.42e-28 | 120 |
| MS.gene48739.t1 | MTR_1g013360 | 38.095 | 147 | 88 | 2 | 348 | 493 | 380 | 524 | 7.11e-24 | 108 |
| MS.gene48739.t1 | MTR_1g087140 | 26.821 | 302 | 163 | 7 | 324 | 579 | 373 | 662 | 1.89e-17 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48739.t1 | AT1G66340 | 79.730 | 740 | 144 | 3 | 2 | 739 | 1 | 736 | 0.0 | 1204 |
| MS.gene48739.t1 | AT2G40940 | 70.608 | 592 | 174 | 0 | 2 | 593 | 1 | 592 | 0.0 | 848 |
| MS.gene48739.t1 | AT3G23150 | 38.421 | 760 | 411 | 18 | 5 | 732 | 32 | 766 | 3.18e-150 | 457 |
| MS.gene48739.t1 | AT3G04580 | 38.255 | 745 | 437 | 16 | 4 | 733 | 26 | 762 | 3.16e-148 | 451 |
| MS.gene48739.t1 | AT3G04580 | 38.255 | 745 | 437 | 16 | 4 | 733 | 26 | 762 | 3.16e-148 | 451 |
| MS.gene48739.t1 | AT3G23150 | 40.806 | 571 | 313 | 12 | 5 | 562 | 32 | 590 | 1.25e-125 | 387 |
| MS.gene48739.t1 | AT1G04310 | 38.966 | 503 | 282 | 9 | 5 | 492 | 34 | 526 | 6.47e-97 | 314 |
| MS.gene48739.t1 | AT1G04310 | 38.966 | 503 | 282 | 9 | 5 | 492 | 34 | 526 | 6.47e-97 | 314 |
| MS.gene48739.t1 | AT5G10720 | 33.798 | 287 | 164 | 8 | 323 | 590 | 339 | 618 | 3.95e-37 | 150 |
| MS.gene48739.t1 | AT1G27320 | 26.782 | 463 | 286 | 10 | 306 | 728 | 412 | 861 | 7.79e-35 | 143 |
| MS.gene48739.t1 | AT5G35750 | 27.765 | 443 | 268 | 11 | 335 | 732 | 578 | 1013 | 5.99e-32 | 134 |
| MS.gene48739.t1 | AT2G17820 | 30.619 | 307 | 186 | 7 | 314 | 598 | 472 | 773 | 5.00e-30 | 128 |
| MS.gene48739.t1 | AT2G01830 | 28.732 | 355 | 203 | 6 | 338 | 646 | 455 | 805 | 8.88e-30 | 127 |
| MS.gene48739.t1 | AT2G01830 | 28.732 | 355 | 203 | 6 | 338 | 646 | 443 | 793 | 9.85e-30 | 127 |
| MS.gene48739.t1 | AT2G01830 | 28.732 | 355 | 203 | 6 | 338 | 646 | 443 | 793 | 9.85e-30 | 127 |
| MS.gene48739.t1 | AT2G01830 | 28.732 | 355 | 203 | 6 | 338 | 646 | 443 | 793 | 9.85e-30 | 127 |
| MS.gene48739.t1 | AT2G01830 | 28.732 | 355 | 203 | 6 | 338 | 646 | 443 | 793 | 9.85e-30 | 127 |
| MS.gene48739.t1 | AT2G01830 | 28.732 | 355 | 203 | 6 | 338 | 646 | 466 | 816 | 1.11e-29 | 127 |
| MS.gene48739.t1 | AT2G47430 | 28.846 | 312 | 176 | 12 | 318 | 592 | 373 | 675 | 1.06e-17 | 88.6 |
| MS.gene48739.t1 | AT4G16250 | 23.554 | 242 | 158 | 7 | 330 | 567 | 918 | 1136 | 2.10e-13 | 74.7 |
| MS.gene48739.t1 | AT2G18790 | 23.293 | 249 | 158 | 7 | 326 | 567 | 910 | 1132 | 9.26e-11 | 66.2 |
Find 154 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAACTTAGTGAATAATTT+TGG | 0.077702 | 4.4:+72706275 | None:intergenic |
| GGTCAACTTGTTTGTGTTTC+CGG | 0.151506 | 4.4:+72704813 | None:intergenic |
| TTTGAAAATTAGAAAGATTT+AGG | 0.173765 | 4.4:+72707424 | None:intergenic |
| GGAACACAAAGTGGTCTTTA+TGG | 0.205815 | 4.4:-72704929 | MS.gene48739:CDS |
| CCATGATTTACTAGAGCTTT+AGG | 0.235011 | 4.4:+72705903 | None:intergenic |
| AAGGGACTTCTTATCCATTT+AGG | 0.238284 | 4.4:-72705006 | MS.gene48739:CDS |
| CAACACATCTAATAAATTTA+TGG | 0.259500 | 4.4:-72707986 | MS.gene48739:CDS |
| TTGGCCTTGCAATTTGTAAA+AGG | 0.281289 | 4.4:-72706208 | MS.gene48739:intron |
| TTGTGACATCGCATCCTAAA+TGG | 0.288123 | 4.4:+72704992 | None:intergenic |
| ATCTCATGGAAGGACATATT+TGG | 0.289745 | 4.4:-72706022 | MS.gene48739:CDS |
| AACTAGAAGCTATGCTTTGA+TGG | 0.293229 | 4.4:-72707379 | MS.gene48739:CDS |
| CTGCAGTATTTCCATATAGA+TGG | 0.300370 | 4.4:-72708049 | MS.gene48739:CDS |
| GTTCTTGTCATGGATGATAA+TGG | 0.309504 | 4.4:-72705855 | MS.gene48739:CDS |
| TCTAATATCCCGGAAGGATT+CGG | 0.318961 | 4.4:+72706493 | None:intergenic |
| TTCATCTTCTCAACAGAAAC+AGG | 0.336907 | 4.4:+72704745 | None:intergenic |
| TGAACAAGGACCCATCTATA+TGG | 0.340257 | 4.4:+72708038 | None:intergenic |
| AGCTCTCAAACAGTTCTCTT+TGG | 0.340716 | 4.4:+72704792 | None:intergenic |
| CAAATTCTTCTCAATGTTGT+TGG | 0.342418 | 4.4:-72706575 | MS.gene48739:CDS |
| TTGTAAAGCCCGAATCCTTC+CGG | 0.346617 | 4.4:-72706502 | MS.gene48739:CDS |
| TACCCTCGTCAACGATGTTT+TGG | 0.349557 | 4.4:-72706895 | MS.gene48739:CDS |
| TGGGGCAGTAGTTGCCATTC+GGG | 0.349651 | 4.4:-72707454 | MS.gene48739:CDS |
| TTGTGGCTCAATACAATTGC+AGG | 0.351088 | 4.4:+72708178 | None:intergenic |
| CGGTAGAACTCTTGGGTTAG+AGG | 0.352498 | 4.4:-72707676 | MS.gene48739:CDS |
| CTGGGGCAGTAGTTGCCATT+CGG | 0.359351 | 4.4:-72707455 | MS.gene48739:CDS |
| CTAATATCCCGGAAGGATTC+GGG | 0.359894 | 4.4:+72706494 | None:intergenic |
| CCACTTATAGTTGCTCTTAC+CGG | 0.360015 | 4.4:-72704832 | MS.gene48739:CDS |
| ATGCCTGCGTGTTGTTTCTC+TGG | 0.361082 | 4.4:-72704950 | MS.gene48739:CDS |
| ACATTATAGGTAAAAGATTC+AGG | 0.366131 | 4.4:-72706323 | MS.gene48739:intron |
| CTTGGTACTGGTAGGAAATC+AGG | 0.368046 | 4.4:+72706467 | None:intergenic |
| GTCTTTATGGATGTTTGTAC+AGG | 0.370740 | 4.4:-72704916 | MS.gene48739:CDS |
| ACATTTCGCATCAGATTTGC+CGG | 0.371012 | 4.4:-72706630 | MS.gene48739:CDS |
| TTGATCACAGGAAGGTTAAT+AGG | 0.374709 | 4.4:+72707564 | None:intergenic |
| TGAGGTCGTAATCTAGCAAC+TGG | 0.378008 | 4.4:+72707495 | None:intergenic |
| TAAGGTAGTTTATGTTCATT+TGG | 0.378697 | 4.4:+72705930 | None:intergenic |
| TTATGGATGCCGACACGTAC+TGG | 0.379232 | 4.4:-72707645 | MS.gene48739:CDS |
| ATTCGTACGCAGGAAGAAAC+TGG | 0.381848 | 4.4:-72707780 | MS.gene48739:CDS |
| GTTGAACTCGGTAGAACTCT+TGG | 0.392589 | 4.4:-72707684 | MS.gene48739:CDS |
| AGATGGGTCCTTGTTCAGTT+TGG | 0.394532 | 4.4:-72708032 | MS.gene48739:CDS |
| GAGGGCAAGGGATCAACTTA+TGG | 0.395439 | 4.4:-72707123 | MS.gene48739:CDS |
| CATCCATGACAAGAACCTTT+AGG | 0.397586 | 4.4:+72705862 | None:intergenic |
| TGTAAAGCCCGAATCCTTCC+GGG | 0.405376 | 4.4:-72706501 | MS.gene48739:CDS |
| GCAGAATGTTGCACTTGATA+TGG | 0.405382 | 4.4:-72707099 | MS.gene48739:CDS |
| ATAGGAACTGTATATCCAAC+AGG | 0.406408 | 4.4:+72707582 | None:intergenic |
| CAACAGGTTTAATCAAGTTA+AGG | 0.407192 | 4.4:+72706681 | None:intergenic |
| TTATGTTCATTTGGACGGTC+CGG | 0.408158 | 4.4:+72705939 | None:intergenic |
| AATCCCATTGGAAGTGGGCT+TGG | 0.408278 | 4.4:-72706227 | MS.gene48739:CDS |
| GATGTTTGTACAGGGTTAGA+TGG | 0.409988 | 4.4:-72704907 | MS.gene48739:CDS |
| TGCGGAGCTTGATAGAGAAA+TGG | 0.412888 | 4.4:-72707808 | MS.gene48739:CDS |
| TGCACTCTCTTCATTGATGC+AGG | 0.414560 | 4.4:-72706985 | MS.gene48739:CDS |
| TGGATTGAAAGCGAAGGTAT+TGG | 0.423019 | 4.4:-72706002 | MS.gene48739:CDS |
| TTCTTGTCATGGATGATAAT+GGG | 0.431607 | 4.4:-72705854 | MS.gene48739:intron |
| CATGCTGCAAAATACATGCC+TGG | 0.434848 | 4.4:-72707474 | MS.gene48739:CDS |
| TTGAACTCGGTAGAACTCTT+GGG | 0.435191 | 4.4:-72707683 | MS.gene48739:CDS |
| GAATAATATGTACAAGCATA+AGG | 0.435805 | 4.4:+72707880 | None:intergenic |
| ACTAGAGCTTTAGGTTTGTA+AGG | 0.436633 | 4.4:+72705912 | None:intergenic |
| TAGGTAAAAGATTCAGGATC+AGG | 0.440352 | 4.4:-72706317 | MS.gene48739:CDS |
| GACTGCTGAGCAACGTCTAA+TGG | 0.441775 | 4.4:-72706952 | MS.gene48739:CDS |
| GGTTAGAGGAATGTGCGTTA+TGG | 0.446709 | 4.4:-72707662 | MS.gene48739:CDS |
| ACTTGTAATGCAGGGTGAGC+AGG | 0.452723 | 4.4:-72705038 | MS.gene48739:intron |
| CCTAAAGCTCTAGTAAATCA+TGG | 0.454091 | 4.4:-72705903 | MS.gene48739:CDS |
| GGTCGAGGTAGTTGCTGATC+AGG | 0.455884 | 4.4:-72707301 | MS.gene48739:intron |
| GCTGTTAAGTTCACAAAAGA+AGG | 0.457297 | 4.4:-72706548 | MS.gene48739:CDS |
| CATGGATCTACAAACATTCC+CGG | 0.460268 | 4.4:-72705885 | MS.gene48739:CDS |
| TATGTTCATTTGGACGGTCC+GGG | 0.471284 | 4.4:+72705940 | None:intergenic |
| TGAAGAAATCTGATATGTAT+TGG | 0.476642 | 4.4:+72708126 | None:intergenic |
| GGTGAGCAGGTCAGCGACAA+AGG | 0.476867 | 4.4:-72705025 | MS.gene48739:CDS |
| CCTCTCTAAACAATGAATGA+AGG | 0.477023 | 4.4:+72706820 | None:intergenic |
| CACGGTTGCTACTAAATACA+TGG | 0.483094 | 4.4:+72707541 | None:intergenic |
| GCGGAGCTTGATAGAGAAAT+GGG | 0.487897 | 4.4:-72707807 | MS.gene48739:CDS |
| ATGCTGCAAAATACATGCCT+GGG | 0.488762 | 4.4:-72707473 | MS.gene48739:CDS |
| CGGCCTAAAGGTTCTTGTCA+TGG | 0.497998 | 4.4:-72705865 | MS.gene48739:CDS |
| TACAAACATTCCCGGCCTAA+AGG | 0.499028 | 4.4:-72705877 | MS.gene48739:CDS |
| TTCATCAATAAATCATCTGC+TGG | 0.499714 | 4.4:+72708152 | None:intergenic |
| AATAATATGTACAAGCATAA+GGG | 0.501867 | 4.4:+72707881 | None:intergenic |
| GATCTTTCACGGCTTGAAGA+TGG | 0.509985 | 4.4:-72706873 | MS.gene48739:CDS |
| GGTGCCTTCATAGTTCTATG+TGG | 0.510808 | 4.4:-72708011 | MS.gene48739:CDS |
| AAGGCCAAGCCCACTTCCAA+TGG | 0.515472 | 4.4:+72706223 | None:intergenic |
| AAATAAAAGTGGCCATCACT+TGG | 0.516449 | 4.4:+72706449 | None:intergenic |
| GTTAGATGGTTATGAATTAG+CGG | 0.517611 | 4.4:-72704893 | MS.gene48739:CDS |
| TGTTTGAGAGCTGGTGTGAA+TGG | 0.520975 | 4.4:-72704781 | MS.gene48739:CDS |
| CATTGTAAAACTCGGAATCC+CGG | 0.521822 | 4.4:-72705958 | MS.gene48739:CDS |
| GTAGTTTATGTTCATTTGGA+CGG | 0.527033 | 4.4:+72705934 | None:intergenic |
| GGATGCGATGTCACAACTGT+TGG | 0.527618 | 4.4:-72704985 | MS.gene48739:CDS |
| TAGAAGAGTCGATGAGGGCA+AGG | 0.528388 | 4.4:-72707136 | MS.gene48739:CDS |
| AAGTGGCCATCACTTGGTAC+TGG | 0.531856 | 4.4:+72706455 | None:intergenic |
| TCATCACCAATCGCATGCAC+CGG | 0.532851 | 4.4:+72706611 | None:intergenic |
| CCGGTAAGAGCAACTATAAG+TGG | 0.540920 | 4.4:+72704832 | None:intergenic |
| GAAAGCGAAGGTATTGGTAA+AGG | 0.545327 | 4.4:-72705996 | MS.gene48739:CDS |
| GTGAGCAGGTCAGCGACAAA+GGG | 0.547570 | 4.4:-72705024 | MS.gene48739:CDS |
| AAATCATCTGCTGGCCATTG+TGG | 0.550408 | 4.4:+72708161 | None:intergenic |
| TATGGATGCCGACACGTACT+GGG | 0.553493 | 4.4:-72707644 | MS.gene48739:CDS |
| TGCAGTATTTCCATATAGAT+GGG | 0.553503 | 4.4:-72708048 | MS.gene48739:CDS |
| GCCACTTTCATTGTAAAACT+CGG | 0.554108 | 4.4:-72705966 | MS.gene48739:CDS |
| ATGACAAGAACCTTTAGGCC+GGG | 0.555716 | 4.4:+72705867 | None:intergenic |
| AGGCCAAGCCCACTTCCAAT+GGG | 0.555851 | 4.4:+72706224 | None:intergenic |
| CCTGTACTCGCAAATAAAAG+TGG | 0.556232 | 4.4:+72706438 | None:intergenic |
| CCTTCATTCATTGTTTAGAG+AGG | 0.557200 | 4.4:-72706820 | MS.gene48739:intron |
| CTTTACAACAACCACGGCGA+TGG | 0.558890 | 4.4:+72706517 | None:intergenic |
| TGTTTCTCTGGAACACAAAG+TGG | 0.561245 | 4.4:-72704938 | MS.gene48739:CDS |
| AAAGAGAACTGTTTGAGAGC+TGG | 0.562595 | 4.4:-72704790 | MS.gene48739:CDS |
| TACCACTGCAGTTAAAACCT+TGG | 0.563298 | 4.4:+72707917 | None:intergenic |
| ACAAAGTAGATAAGCTCGAG+CGG | 0.563726 | 4.4:+72708080 | None:intergenic |
| AATCAGGAAATCTAATATCC+CGG | 0.566463 | 4.4:+72706483 | None:intergenic |
| TAGCTTCTAGTTGAAACCTC+AGG | 0.568702 | 4.4:+72707390 | None:intergenic |
| CATGACAAGAACCTTTAGGC+CGG | 0.569164 | 4.4:+72705866 | None:intergenic |
| CGAATGGCAACTACTGCCCC+AGG | 0.575192 | 4.4:+72707456 | None:intergenic |
| TAACAGAACTCTTGGAGCGT+CGG | 0.575513 | 4.4:-72704714 | MS.gene48739:CDS |
| AATGGGTTTGATTCGTACGC+AGG | 0.576988 | 4.4:-72707790 | MS.gene48739:CDS |
| GATTTGCCGGTGCATGCGAT+TGG | 0.577697 | 4.4:-72706617 | MS.gene48739:CDS |
| TGCTCCACATAGAACTATGA+AGG | 0.577986 | 4.4:+72708007 | None:intergenic |
| CTAAATACATGGTTGATCAC+AGG | 0.580168 | 4.4:+72707552 | None:intergenic |
| TCTTTATGGATGTTTGTACA+GGG | 0.580421 | 4.4:-72704915 | MS.gene48739:CDS |
| TGAAGGCACCAAACTGAACA+AGG | 0.580571 | 4.4:+72708024 | None:intergenic |
| CAAAGTAGATAAGCTCGAGC+GGG | 0.583205 | 4.4:+72708081 | None:intergenic |
| TTGAGACAGCAGAACCCTGT+TGG | 0.584142 | 4.4:-72707597 | MS.gene48739:CDS |
| TGCAGTTAAAACCTTGGCGA+TGG | 0.585678 | 4.4:+72707923 | None:intergenic |
| GAGCAGGTTTGTGAATCTCA+TGG | 0.585691 | 4.4:-72706036 | MS.gene48739:intron |
| AAATTAGAAAGATTTAGGAG+AGG | 0.591308 | 4.4:+72707429 | None:intergenic |
| GCATGTACATGAGTTAGAGC+TGG | 0.591900 | 4.4:-72707322 | MS.gene48739:CDS |
| ATGTACAAGCATAAGGGCAG+TGG | 0.596476 | 4.4:+72707887 | None:intergenic |
| AGTTCTTGTATGAATTGTGA+AGG | 0.601737 | 4.4:+72707962 | None:intergenic |
| GATGCCGACACGTACTGGGT+TGG | 0.605973 | 4.4:-72707640 | MS.gene48739:CDS |
| AGGAAATCTAATATCCCGGA+AGG | 0.610494 | 4.4:+72706487 | None:intergenic |
| GATCCAAAACATCGTTGACG+AGG | 0.611768 | 4.4:+72706892 | None:intergenic |
| CACTGTCTAGCACTATCAGA+TGG | 0.612788 | 4.4:+72707345 | None:intergenic |
| TTCCTACCAGTACCAAGTGA+TGG | 0.619110 | 4.4:-72706461 | MS.gene48739:CDS |
| AGGTTTGTGAATCTCATGGA+AGG | 0.621756 | 4.4:-72706032 | MS.gene48739:CDS |
| AGAAGAGTCGATGAGGGCAA+GGG | 0.622079 | 4.4:-72707135 | MS.gene48739:CDS |
| CATATTTGGATTGAAAGCGA+AGG | 0.630241 | 4.4:-72706008 | MS.gene48739:CDS |
| GTTTCTGTTGAGAAGATGAA+AGG | 0.632532 | 4.4:-72704742 | MS.gene48739:CDS |
| GCAATTGTATTGAGCCACAA+TGG | 0.634157 | 4.4:-72708175 | MS.gene48739:CDS |
| TGCTGAGCAACGTCTAATGG+TGG | 0.634295 | 4.4:-72706949 | MS.gene48739:CDS |
| AATTGTAATGACCATCGCCA+AGG | 0.634930 | 4.4:-72707934 | MS.gene48739:CDS |
| AGTGCAATAATTGCATGCAT+CGG | 0.638531 | 4.4:+72707002 | None:intergenic |
| AGCTCCAACCCAGTACGTGT+CGG | 0.649105 | 4.4:+72707636 | None:intergenic |
| TCAAATATATGATTGGCCTG+AGG | 0.650243 | 4.4:-72707406 | MS.gene48739:CDS |
| AAAACGACTCTTGTTGAACT+CGG | 0.650784 | 4.4:-72707696 | MS.gene48739:CDS |
| ATTTAGGAGAGGAACCCGAA+TGG | 0.658743 | 4.4:+72707440 | None:intergenic |
| CACAATTCATACAAGAACTG+TGG | 0.659608 | 4.4:-72707958 | MS.gene48739:CDS |
| CAATCTTAGAAGAGTCGATG+AGG | 0.659708 | 4.4:-72707142 | MS.gene48739:CDS |
| GCGGGATCGAGAAATAAGCA+AGG | 0.660212 | 4.4:+72708099 | None:intergenic |
| TTCGGGCTTTACAACAACCA+CGG | 0.662984 | 4.4:+72706511 | None:intergenic |
| ATCCAAAACATCGTTGACGA+GGG | 0.663430 | 4.4:+72706893 | None:intergenic |
| ACATGAGTTAGAGCTGGTCG+AGG | 0.664742 | 4.4:-72707316 | MS.gene48739:CDS |
| CGGGATCGAGAAATAAGCAA+GGG | 0.666665 | 4.4:+72708100 | None:intergenic |
| AATCTTAGAAGAGTCGATGA+GGG | 0.669206 | 4.4:-72707141 | MS.gene48739:CDS |
| AGGCAGCATTTCCATCGCCG+TGG | 0.671963 | 4.4:-72706528 | MS.gene48739:CDS |
| TGCTGCAAAATACATGCCTG+GGG | 0.686693 | 4.4:-72707472 | MS.gene48739:CDS |
| GGCCATCACTTGGTACTGGT+AGG | 0.695660 | 4.4:+72706459 | None:intergenic |
| ATACATGGTTGATCACAGGA+AGG | 0.702361 | 4.4:+72707556 | None:intergenic |
| GAGGTCGTAATCTAGCAACT+GGG | 0.705400 | 4.4:+72707496 | None:intergenic |
| CATCTGATAGTGCTAGACAG+TGG | 0.733689 | 4.4:-72707344 | MS.gene48739:CDS |
| TAGGAACTGTATATCCAACA+GGG | 0.735052 | 4.4:+72707583 | None:intergenic |
| GTTCCAGAGAAACAACACGC+AGG | 0.758519 | 4.4:+72704947 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAAATATTGCTTTTA+GGG | + | chr4.4:72707289-72707308 | None:intergenic | 10.0% |
| !! | AAATTGTCAAATAAAAATTC+AGG | + | chr4.4:72707651-72707670 | None:intergenic | 15.0% |
| !! | TTTGAAAATTAGAAAGATTT+AGG | + | chr4.4:72705460-72705479 | None:intergenic | 15.0% |
| !!! | ATTATGTATATTTTCTTTTC+TGG | + | chr4.4:72707701-72707720 | None:intergenic | 15.0% |
| !!! | CTAATTTTCAAATATATGAT+TGG | - | chr4.4:72705468-72705487 | MS.gene48739:intron | 15.0% |
| !!! | GTTTTTAAAATATTGCTTTT+AGG | + | chr4.4:72707290-72707309 | None:intergenic | 15.0% |
| !!! | TTTTATAGAAAAGTAAACTT+AGG | - | chr4.4:72707108-72707127 | MS.gene48739:CDS | 15.0% |
| !! | AATAATATGTACAAGCATAA+GGG | + | chr4.4:72705003-72705022 | None:intergenic | 20.0% |
| !! | AATTTAAACTAATAGGTGAA+AGG | - | chr4.4:72707623-72707642 | MS.gene48739:CDS | 20.0% |
| !! | ATGCTTTCAAGAATATAATT+GGG | + | chr4.4:72707168-72707187 | None:intergenic | 20.0% |
| !! | CAACACATCTAATAAATTTA+TGG | - | chr4.4:72704895-72704914 | MS.gene48739:CDS | 20.0% |
| !! | TATGCTTTCAAGAATATAAT+TGG | + | chr4.4:72707169-72707188 | None:intergenic | 20.0% |
| !!! | AGAATTATTTTTGAAGAACA+AGG | - | chr4.4:72705049-72705068 | MS.gene48739:intron | 20.0% |
| !!! | AGTTTTAACACTTAATAGAT+CGG | + | chr4.4:72705027-72705046 | None:intergenic | 20.0% |
| !!! | CAAACTTAGTGAATAATTTT+GGG | + | chr4.4:72706608-72706627 | None:intergenic | 20.0% |
| !!! | CAATATTTTAAAAACCGAAT+TGG | - | chr4.4:72707295-72707314 | MS.gene48739:intron | 20.0% |
| !!! | TAATTTGTTTTCTATTCCTT+GGG | - | chr4.4:72706733-72706752 | MS.gene48739:intron | 20.0% |
| !!! | TATTTTGTTTTCCACATTAT+AGG | - | chr4.4:72706545-72706564 | MS.gene48739:CDS | 20.0% |
| !!! | TTAATTTGTTTTCTATTCCT+TGG | - | chr4.4:72706732-72706751 | MS.gene48739:intron | 20.0% |
| ! | AAAGATCATAAGCTATTAGT+CGG | + | chr4.4:72706129-72706148 | None:intergenic | 25.0% |
| ! | AAATTAGAAAGATTTAGGAG+AGG | + | chr4.4:72705455-72705474 | None:intergenic | 25.0% |
| ! | ACAAAGGAAACTGAATAAAA+TGG | + | chr4.4:72705617-72705636 | None:intergenic | 25.0% |
| ! | ACATTATAGGTAAAAGATTC+AGG | - | chr4.4:72706558-72706577 | MS.gene48739:CDS | 25.0% |
| ! | GAATAATATGTACAAGCATA+AGG | + | chr4.4:72705004-72705023 | None:intergenic | 25.0% |
| ! | TAAGGTAGTTTATGTTCATT+TGG | + | chr4.4:72706954-72706973 | None:intergenic | 25.0% |
| ! | TATACGTTCAGTTATTTGAA+TGG | + | chr4.4:72707385-72707404 | None:intergenic | 25.0% |
| ! | TGAAGAAATCTGATATGTAT+TGG | + | chr4.4:72704758-72704777 | None:intergenic | 25.0% |
| ! | TGCTTTCAAGAATATAATTG+GGG | + | chr4.4:72707167-72707186 | None:intergenic | 25.0% |
| ! | TTATTTGAATGGTTAGAACA+CGG | + | chr4.4:72707374-72707393 | None:intergenic | 25.0% |
| ! | TTTAAATATACTATAGCCCA+AGG | + | chr4.4:72706752-72706771 | None:intergenic | 25.0% |
| !! | AATACCTTTTACAAATTGCA+AGG | + | chr4.4:72706680-72706699 | None:intergenic | 25.0% |
| !! | ACTAATATAGCTGTACTTTT+TGG | + | chr4.4:72706106-72706125 | None:intergenic | 25.0% |
| !! | GCAAACTTAGTGAATAATTT+TGG | + | chr4.4:72706609-72706628 | None:intergenic | 25.0% |
| !! | TAAGTCTTTTCATAGTAAGT+GGG | + | chr4.4:72707542-72707561 | None:intergenic | 25.0% |
| !! | TGAATCTTTTACCTATAATG+TGG | + | chr4.4:72706559-72706578 | None:intergenic | 25.0% |
| !! | TGACTAATTTTCTTCTGTTT+TGG | - | chr4.4:72706482-72706501 | MS.gene48739:CDS | 25.0% |
| !!! | CTAATATAGCTGTACTTTTT+GGG | + | chr4.4:72706105-72706124 | None:intergenic | 25.0% |
| !!! | GATTTTTTGTTGCTAATGTT+TGG | + | chr4.4:72706638-72706657 | None:intergenic | 25.0% |
| !!! | GTTTTAACACTTAATAGATC+GGG | + | chr4.4:72705026-72705045 | None:intergenic | 25.0% |
| AAAACCAAATGACATCAAAC+CGG | + | chr4.4:72707441-72707460 | None:intergenic | 30.0% | |
| AAGGACTATGAAAAGAAAAC+CGG | + | chr4.4:72707479-72707498 | None:intergenic | 30.0% | |
| AAGTAAGTCTATGTACATCA+AGG | - | chr4.4:72707234-72707253 | MS.gene48739:intron | 30.0% | |
| AAGTCAGATGAATTGTTTAG+TGG | - | chr4.4:72707764-72707783 | MS.gene48739:CDS | 30.0% | |
| AATCAGGAAATCTAATATCC+CGG | + | chr4.4:72706401-72706420 | None:intergenic | 30.0% | |
| AGGTCCATGTAAAAGAATAT+CGG | + | chr4.4:72705681-72705700 | None:intergenic | 30.0% | |
| AGTTCTTGTATGAATTGTGA+AGG | + | chr4.4:72704922-72704941 | None:intergenic | 30.0% | |
| CAAATTCTTCTCAATGTTGT+TGG | - | chr4.4:72706306-72706325 | MS.gene48739:CDS | 30.0% | |
| CAACAGGTTTAATCAAGTTA+AGG | + | chr4.4:72706203-72706222 | None:intergenic | 30.0% | |
| CTTACTATGAAAAGACTTAG+TGG | - | chr4.4:72707543-72707562 | MS.gene48739:CDS | 30.0% | |
| GTAGTTTATGTTCATTTGGA+CGG | + | chr4.4:72706950-72706969 | None:intergenic | 30.0% | |
| GTTAGATGGTTATGAATTAG+CGG | - | chr4.4:72707988-72708007 | MS.gene48739:CDS | 30.0% | |
| TCTTTATGGATGTTTGTACA+GGG | - | chr4.4:72707966-72707985 | MS.gene48739:CDS | 30.0% | |
| TGATGTACATAGACTTACTT+TGG | + | chr4.4:72707234-72707253 | None:intergenic | 30.0% | |
| TGCAGTATTTCCATATAGAT+GGG | - | chr4.4:72704833-72704852 | MS.gene48739:CDS | 30.0% | |
| TGTAAAGAAATACGCTACAA+AGG | + | chr4.4:72705633-72705652 | None:intergenic | 30.0% | |
| TTAGCAACAAAAAATCCCAT+TGG | - | chr4.4:72706642-72706661 | MS.gene48739:CDS | 30.0% | |
| TTCATCAATAAATCATCTGC+TGG | + | chr4.4:72704732-72704751 | None:intergenic | 30.0% | |
| TTCTTGTCATGGATGATAAT+GGG | - | chr4.4:72707027-72707046 | MS.gene48739:CDS | 30.0% | |
| ! | AAGTCTTTTCATAGTAAGTG+GGG | + | chr4.4:72707541-72707560 | None:intergenic | 30.0% |
| ! | CAAGCTTTAATAGCATATCA+AGG | - | chr4.4:72707581-72707600 | MS.gene48739:CDS | 30.0% |
| ! | CTAAGTCTTTTCATAGTAAG+TGG | + | chr4.4:72707543-72707562 | None:intergenic | 30.0% |
| ! | GAATTTGCTCTCTTCAATAT+TGG | - | chr4.4:72706778-72706797 | MS.gene48739:intron | 30.0% |
| ! | GATCTTTGAGTTTCTTCAAA+AGG | - | chr4.4:72706142-72706161 | MS.gene48739:intron | 30.0% |
| ! | TTCTTTTCATAGTCCTTGAT+GGG | - | chr4.4:72707482-72707501 | MS.gene48739:CDS | 30.0% |
| ! | TTGACCGATATTCTTTTACA+TGG | - | chr4.4:72705674-72705693 | MS.gene48739:intron | 30.0% |
| ! | TTTCTTTTCATAGTCCTTGA+TGG | - | chr4.4:72707481-72707500 | MS.gene48739:CDS | 30.0% |
| !! | AGATTTGTTATTCTGATTGC+AGG | - | chr4.4:72706176-72706195 | MS.gene48739:intron | 30.0% |
| !! | GATTTTCTATTGATTGCGTA+CGG | - | chr4.4:72706808-72706827 | MS.gene48739:intron | 30.0% |
| !!! | AATAATTTTGGGATGTCTTG+TGG | + | chr4.4:72706597-72706616 | None:intergenic | 30.0% |
| !!! | TCGATGAAATTTTAACTGCA+CGG | + | chr4.4:72705361-72705380 | None:intergenic | 30.0% |
| !!! | TGATGTCATTTGGTTTTTAC+AGG | - | chr4.4:72707444-72707463 | MS.gene48739:CDS | 30.0% |
| AAAACCATAATGTCCCATCA+AGG | + | chr4.4:72707498-72707517 | None:intergenic | 35.0% | |
| AAAACGACTCTTGTTGAACT+CGG | - | chr4.4:72705185-72705204 | MS.gene48739:intron | 35.0% | |
| AAATAAAAGTGGCCATCACT+TGG | + | chr4.4:72706435-72706454 | None:intergenic | 35.0% | |
| AACTAGAAGCTATGCTTTGA+TGG | - | chr4.4:72705502-72705521 | MS.gene48739:intron | 35.0% | |
| AAGGGACTTCTTATCCATTT+AGG | - | chr4.4:72707875-72707894 | MS.gene48739:CDS | 35.0% | |
| AATCTTAGAAGAGTCGATGA+GGG | - | chr4.4:72705740-72705759 | MS.gene48739:intron | 35.0% | |
| AATGCTGTTCACAGTTTAAC+AGG | - | chr4.4:72707406-72707425 | MS.gene48739:CDS | 35.0% | |
| ACAAAAAATCCCATTGGAAG+TGG | - | chr4.4:72706648-72706667 | MS.gene48739:CDS | 35.0% | |
| ACTATGAAAAGACTTAGTGG+TGG | - | chr4.4:72707546-72707565 | MS.gene48739:CDS | 35.0% | |
| AGATTTCACAACTGAAGGTA+CGG | + | chr4.4:72707071-72707090 | None:intergenic | 35.0% | |
| AGTGCAATAATTGCATGCAT+CGG | + | chr4.4:72705882-72705901 | None:intergenic | 35.0% | |
| ATAGGAACTGTATATCCAAC+AGG | + | chr4.4:72705302-72705321 | None:intergenic | 35.0% | |
| ATCAGTTATGAGACAAGCAA+GGG | + | chr4.4:72707817-72707836 | None:intergenic | 35.0% | |
| ATCTCATGGAAGGACATATT+TGG | - | chr4.4:72706859-72706878 | MS.gene48739:CDS | 35.0% | |
| ATGGTGAAACTTGTAATGCA+GGG | - | chr4.4:72707835-72707854 | MS.gene48739:CDS | 35.0% | |
| CAAAAAATCCCATTGGAAGT+GGG | - | chr4.4:72706649-72706668 | MS.gene48739:CDS | 35.0% | |
| CACAATTCATACAAGAACTG+TGG | - | chr4.4:72704923-72704942 | MS.gene48739:CDS | 35.0% | |
| CATATTTGGATTGAAAGCGA+AGG | - | chr4.4:72706873-72706892 | MS.gene48739:CDS | 35.0% | |
| CCATGATTTACTAGAGCTTT+AGG | + | chr4.4:72706981-72707000 | None:intergenic | 35.0% | |
| CCTCTCTAAACAATGAATGA+AGG | + | chr4.4:72706064-72706083 | None:intergenic | 35.0% | |
| CCTTCATTCATTGTTTAGAG+AGG | - | chr4.4:72706061-72706080 | MS.gene48739:intron | 35.0% | |
| CTAAATACATGGTTGATCAC+AGG | + | chr4.4:72705332-72705351 | None:intergenic | 35.0% | |
| CTGCAGTATTTCCATATAGA+TGG | - | chr4.4:72704832-72704851 | MS.gene48739:CDS | 35.0% | |
| CTTCTACTTGCAATCTAACT+TGG | - | chr4.4:72707741-72707760 | MS.gene48739:CDS | 35.0% | |
| GCTGTTAAGTTCACAAAAGA+AGG | - | chr4.4:72706333-72706352 | MS.gene48739:intron | 35.0% | |
| GTAACAGATTTCACAACTGA+AGG | + | chr4.4:72707076-72707095 | None:intergenic | 35.0% | |
| GTCTTTATGGATGTTTGTAC+AGG | - | chr4.4:72707965-72707984 | MS.gene48739:CDS | 35.0% | |
| GTGAAATCTGTTACTATGTC+TGG | - | chr4.4:72707082-72707101 | MS.gene48739:CDS | 35.0% | |
| GTTCTTGTCATGGATGATAA+TGG | - | chr4.4:72707026-72707045 | MS.gene48739:CDS | 35.0% | |
| GTTTCTGTTGAGAAGATGAA+AGG | - | chr4.4:72708139-72708158 | MS.gene48739:CDS | 35.0% | |
| TAGGAACTGTATATCCAACA+GGG | + | chr4.4:72705301-72705320 | None:intergenic | 35.0% | |
| TAGGTAAAAGATTCAGGATC+AGG | - | chr4.4:72706564-72706583 | MS.gene48739:CDS | 35.0% | |
| TATGTACATCAAGGTTTAGC+TGG | - | chr4.4:72707243-72707262 | MS.gene48739:intron | 35.0% | |
| TTCATCTTCTCAACAGAAAC+AGG | + | chr4.4:72708139-72708158 | None:intergenic | 35.0% | |
| TTGATCACAGGAAGGTTAAT+AGG | + | chr4.4:72705320-72705339 | None:intergenic | 35.0% | |
| ! | AGCTTTTTAACAGATGCAAC+AGG | + | chr4.4:72706219-72706238 | None:intergenic | 35.0% |
| ! | CCTAAAGCTCTAGTAAATCA+TGG | - | chr4.4:72706978-72706997 | MS.gene48739:CDS | 35.0% |
| ! | GCCACTTTCATTGTAAAACT+CGG | - | chr4.4:72706915-72706934 | MS.gene48739:CDS | 35.0% |
| ! | TCCGAGTTTTACAATGAAAG+TGG | + | chr4.4:72706919-72706938 | None:intergenic | 35.0% |
| !! | ACGATGTTTTGGATCTTTCA+CGG | - | chr4.4:72705997-72706016 | MS.gene48739:CDS | 35.0% |
| !! | ACTAGAGCTTTAGGTTTGTA+AGG | + | chr4.4:72706972-72706991 | None:intergenic | 35.0% |
| !! | ACTTTAAGACCCTACTTCTT+GGG | - | chr4.4:72707141-72707160 | MS.gene48739:CDS | 35.0% |
| !! | ATTTTTGAAGAACAAGGCTG+CGG | - | chr4.4:72705055-72705074 | MS.gene48739:intron | 35.0% |
| !! | GGTATCTTTAATTTGTGAGC+AGG | - | chr4.4:72706829-72706848 | MS.gene48739:CDS | 35.0% |
| !! | TACTTTAAGACCCTACTTCT+TGG | - | chr4.4:72707140-72707159 | MS.gene48739:CDS | 35.0% |
| !! | TCAAATATATGATTGGCCTG+AGG | - | chr4.4:72705475-72705494 | MS.gene48739:intron | 35.0% |
| !! | TTGGCCTTGCAATTTGTAAA+AGG | - | chr4.4:72706673-72706692 | MS.gene48739:CDS | 35.0% |
| !!! | AGGTGTTTTAACAGAACTCT+TGG | - | chr4.4:72708159-72708178 | MS.gene48739:CDS | 35.0% |
| AAAGACTTAGTGGTGGTTGT+TGG | - | chr4.4:72707553-72707572 | MS.gene48739:CDS | 40.0% | |
| AAAGAGAACTGTTTGAGAGC+TGG | - | chr4.4:72708091-72708110 | MS.gene48739:CDS | 40.0% | |
| AATTGTAATGACCATCGCCA+AGG | - | chr4.4:72704947-72704966 | MS.gene48739:CDS | 40.0% | |
| ACAAAGTAGATAAGCTCGAG+CGG | + | chr4.4:72704804-72704823 | None:intergenic | 40.0% | |
| ACATTTCGCATCAGATTTGC+CGG | - | chr4.4:72706251-72706270 | MS.gene48739:CDS | 40.0% | |
| ACCAAGATGTCTCTCCAATT+CGG | + | chr4.4:72707312-72707331 | None:intergenic | 40.0% | |
| AGCTCTCAAACAGTTCTCTT+TGG | + | chr4.4:72708092-72708111 | None:intergenic | 40.0% | |
| AGGAAATCTAATATCCCGGA+AGG | + | chr4.4:72706397-72706416 | None:intergenic | 40.0% | |
| AGGTTTGTGAATCTCATGGA+AGG | - | chr4.4:72706849-72706868 | MS.gene48739:CDS | 40.0% | |
| ATACATGGTTGATCACAGGA+AGG | + | chr4.4:72705328-72705347 | None:intergenic | 40.0% | |
| ATCCAAAACATCGTTGACGA+GGG | + | chr4.4:72705991-72706010 | None:intergenic | 40.0% | |
| ATGCTGCAAAATACATGCCT+GGG | - | chr4.4:72705408-72705427 | MS.gene48739:intron | 40.0% | |
| CAATCTTAGAAGAGTCGATG+AGG | - | chr4.4:72705739-72705758 | MS.gene48739:intron | 40.0% | |
| CACGGTTGCTACTAAATACA+TGG | + | chr4.4:72705343-72705362 | None:intergenic | 40.0% | |
| CATCAGTTATGAGACAAGCA+AGG | + | chr4.4:72707818-72707837 | None:intergenic | 40.0% | |
| CATCCATGACAAGAACCTTT+AGG | + | chr4.4:72707022-72707041 | None:intergenic | 40.0% | |
| CATGGATCTACAAACATTCC+CGG | - | chr4.4:72706996-72707015 | MS.gene48739:CDS | 40.0% | |
| CATTGTAAAACTCGGAATCC+CGG | - | chr4.4:72706923-72706942 | MS.gene48739:CDS | 40.0% | |
| CCACTTATAGTTGCTCTTAC+CGG | - | chr4.4:72708049-72708068 | MS.gene48739:CDS | 40.0% | |
| CCTGTACTCGCAAATAAAAG+TGG | + | chr4.4:72706446-72706465 | None:intergenic | 40.0% | |
| CGTCTGTTATCTGATTTCGA+AGG | - | chr4.4:72706515-72706534 | MS.gene48739:CDS | 40.0% | |
| CTGCATTAAACCACTCAAAC+CGG | - | chr4.4:72707341-72707360 | MS.gene48739:CDS | 40.0% | |
| CTGTTATCTGATTTCGAAGG+TGG | - | chr4.4:72706518-72706537 | MS.gene48739:CDS | 40.0% | |
| CTTGCTTGTCTCATAACTGA+TGG | - | chr4.4:72707816-72707835 | MS.gene48739:CDS | 40.0% | |
| GATGGTGAAACTTGTAATGC+AGG | - | chr4.4:72707834-72707853 | MS.gene48739:CDS | 40.0% | |
| GATGTTTGTACAGGGTTAGA+TGG | - | chr4.4:72707974-72707993 | MS.gene48739:CDS | 40.0% | |
| GCAATTGTATTGAGCCACAA+TGG | - | chr4.4:72704706-72704725 | MS.gene48739:CDS | 40.0% | |
| GCAGAATGTTGCACTTGATA+TGG | - | chr4.4:72705782-72705801 | MS.gene48739:intron | 40.0% | |
| GGAACACAAAGTGGTCTTTA+TGG | - | chr4.4:72707952-72707971 | MS.gene48739:CDS | 40.0% | |
| TACCACTGCAGTTAAAACCT+TGG | + | chr4.4:72704967-72704986 | None:intergenic | 40.0% | |
| TAGTCCTTGATGGGACATTA+TGG | - | chr4.4:72707491-72707510 | MS.gene48739:CDS | 40.0% | |
| TCTAATATCCCGGAAGGATT+CGG | + | chr4.4:72706391-72706410 | None:intergenic | 40.0% | |
| TGAACAAGGACCCATCTATA+TGG | + | chr4.4:72704846-72704865 | None:intergenic | 40.0% | |
| TGCATTAAACCACTCAAACC+GGG | - | chr4.4:72707342-72707361 | MS.gene48739:CDS | 40.0% | |
| TGCTCCACATAGAACTATGA+AGG | + | chr4.4:72704877-72704896 | None:intergenic | 40.0% | |
| TTATGTTCATTTGGACGGTC+CGG | + | chr4.4:72706945-72706964 | None:intergenic | 40.0% | |
| TTGAACTCGGTAGAACTCTT+GGG | - | chr4.4:72705198-72705217 | MS.gene48739:intron | 40.0% | |
| TTGTGACATCGCATCCTAAA+TGG | + | chr4.4:72707892-72707911 | None:intergenic | 40.0% | |
| TTGTGGCTCAATACAATTGC+AGG | + | chr4.4:72704706-72704725 | None:intergenic | 40.0% | |
| ! | GGTCAACTTGTTTGTGTTTC+CGG | + | chr4.4:72708071-72708090 | None:intergenic | 40.0% |
| ! | TAGCTTCTAGTTGAAACCTC+AGG | + | chr4.4:72705494-72705513 | None:intergenic | 40.0% |
| ! | TCATGCTCGCAATGACTTTT+TGG | - | chr4.4:72705830-72705849 | MS.gene48739:intron | 40.0% |
| ! | TGGATTGAAAGCGAAGGTAT+TGG | - | chr4.4:72706879-72706898 | MS.gene48739:CDS | 40.0% |
| ! | TTTTTACAGGCTGAACTGTC+CGG | - | chr4.4:72707457-72707476 | MS.gene48739:CDS | 40.0% |
| !! | CCACTTTTATTTGCGAGTAC+AGG | - | chr4.4:72706443-72706462 | MS.gene48739:CDS | 40.0% |
| !! | GAAAGCGAAGGTATTGGTAA+AGG | - | chr4.4:72706885-72706904 | MS.gene48739:CDS | 40.0% |
| !! | TGTTTCTCTGGAACACAAAG+TGG | - | chr4.4:72707943-72707962 | MS.gene48739:CDS | 40.0% |
| !!! | AGCTGTACTTTTTGGGATGT+AGG | + | chr4.4:72706098-72706117 | None:intergenic | 40.0% |
| AAATCATCTGCTGGCCATTG+TGG | + | chr4.4:72704723-72704742 | None:intergenic | 45.0% | |
| ACCGAATTGGAGAGACATCT+TGG | - | chr4.4:72707308-72707327 | MS.gene48739:CDS | 45.0% | |
| AGATGGGTCCTTGTTCAGTT+TGG | - | chr4.4:72704849-72704868 | MS.gene48739:CDS | 45.0% | |
| ATAATTGGGGCCCAAGAAGT+AGG | + | chr4.4:72707154-72707173 | None:intergenic | 45.0% | |
| ATGACAAGAACCTTTAGGCC+GGG | + | chr4.4:72707017-72707036 | None:intergenic | 45.0% | |
| ATGTACAAGCATAAGGGCAG+TGG | + | chr4.4:72704997-72705016 | None:intergenic | 45.0% | |
| ATTCGTACGCAGGAAGAAAC+TGG | - | chr4.4:72705101-72705120 | MS.gene48739:intron | 45.0% | |
| ATTTAGGAGAGGAACCCGAA+TGG | + | chr4.4:72705444-72705463 | None:intergenic | 45.0% | |
| CAAAGTAGATAAGCTCGAGC+GGG | + | chr4.4:72704803-72704822 | None:intergenic | 45.0% | |
| CACTGTCTAGCACTATCAGA+TGG | + | chr4.4:72705539-72705558 | None:intergenic | 45.0% | |
| CAGCTACCTGGTGTAAAAAC+AGG | + | chr4.4:72705701-72705720 | None:intergenic | 45.0% | |
| CATGACAAGAACCTTTAGGC+CGG | + | chr4.4:72707018-72707037 | None:intergenic | 45.0% | |
| CATGCTGCAAAATACATGCC+TGG | - | chr4.4:72705407-72705426 | MS.gene48739:intron | 45.0% | |
| CCGGTAAGAGCAACTATAAG+TGG | + | chr4.4:72708052-72708071 | None:intergenic | 45.0% | |
| CGGGATCGAGAAATAAGCAA+GGG | + | chr4.4:72704784-72704803 | None:intergenic | 45.0% | |
| CTAATATCCCGGAAGGATTC+GGG | + | chr4.4:72706390-72706409 | None:intergenic | 45.0% | |
| GAGCAGGTTTGTGAATCTCA+TGG | - | chr4.4:72706845-72706864 | MS.gene48739:CDS | 45.0% | |
| GAGGTCGTAATCTAGCAACT+GGG | + | chr4.4:72705388-72705407 | None:intergenic | 45.0% | |
| GATCCAAAACATCGTTGACG+AGG | + | chr4.4:72705992-72706011 | None:intergenic | 45.0% | |
| GATCTTTCACGGCTTGAAGA+TGG | - | chr4.4:72706008-72706027 | MS.gene48739:CDS | 45.0% | |
| GCATGTACATGAGTTAGAGC+TGG | - | chr4.4:72705559-72705578 | MS.gene48739:intron | 45.0% | |
| GCGGAGCTTGATAGAGAAAT+GGG | - | chr4.4:72705074-72705093 | MS.gene48739:intron | 45.0% | |
| GGTTAGAGGAATGTGCGTTA+TGG | - | chr4.4:72705219-72705238 | MS.gene48739:intron | 45.0% | |
| GTTGAACTCGGTAGAACTCT+TGG | - | chr4.4:72705197-72705216 | MS.gene48739:intron | 45.0% | |
| GTTTAACAGGCTGAACTGTC+CGG | - | chr4.4:72707419-72707438 | MS.gene48739:CDS | 45.0% | |
| TAACAGAACTCTTGGAGCGT+CGG | - | chr4.4:72708167-72708186 | MS.gene48739:CDS | 45.0% | |
| TAATTGGGGCCCAAGAAGTA+GGG | + | chr4.4:72707153-72707172 | None:intergenic | 45.0% | |
| TACAAACATTCCCGGCCTAA+AGG | - | chr4.4:72707004-72707023 | MS.gene48739:CDS | 45.0% | |
| TATGTTCATTTGGACGGTCC+GGG | + | chr4.4:72706944-72706963 | None:intergenic | 45.0% | |
| TGAGGTCGTAATCTAGCAAC+TGG | + | chr4.4:72705389-72705408 | None:intergenic | 45.0% | |
| TGCACTCTCTTCATTGATGC+AGG | - | chr4.4:72705896-72705915 | MS.gene48739:CDS | 45.0% | |
| TGCAGTTAAAACCTTGGCGA+TGG | + | chr4.4:72704961-72704980 | None:intergenic | 45.0% | |
| TGCGGAGCTTGATAGAGAAA+TGG | - | chr4.4:72705073-72705092 | MS.gene48739:intron | 45.0% | |
| TGCTGCAAAATACATGCCTG+GGG | - | chr4.4:72705409-72705428 | MS.gene48739:intron | 45.0% | |
| TGTTTGAGAGCTGGTGTGAA+TGG | - | chr4.4:72708100-72708119 | MS.gene48739:CDS | 45.0% | |
| TTCCTACCAGTACCAAGTGA+TGG | - | chr4.4:72706420-72706439 | MS.gene48739:intron | 45.0% | |
| TTCGGGCTTTACAACAACCA+CGG | + | chr4.4:72706373-72706392 | None:intergenic | 45.0% | |
| TTGGAGAGACATCTTGGTCA+TGG | - | chr4.4:72707314-72707333 | MS.gene48739:CDS | 45.0% | |
| TTGTAAAGCCCGAATCCTTC+CGG | - | chr4.4:72706379-72706398 | MS.gene48739:intron | 45.0% | |
| ! | AATGGGTTTGATTCGTACGC+AGG | - | chr4.4:72705091-72705110 | MS.gene48739:intron | 45.0% |
| ! | CATCTGATAGTGCTAGACAG+TGG | - | chr4.4:72705537-72705556 | MS.gene48739:intron | 45.0% |
| ! | CTGTCCGGTTTGATGTCATT+TGG | - | chr4.4:72707434-72707453 | MS.gene48739:CDS | 45.0% |
| ! | GGCATGTATTTTGCAGCATG+AGG | + | chr4.4:72705407-72705426 | None:intergenic | 45.0% |
| ! | GGTGCCTTCATAGTTCTATG+TGG | - | chr4.4:72704870-72704889 | MS.gene48739:CDS | 45.0% |
| ! | TACCCTCGTCAACGATGTTT+TGG | - | chr4.4:72705986-72706005 | MS.gene48739:CDS | 45.0% |
| !! | CTTGGTACTGGTAGGAAATC+AGG | + | chr4.4:72706417-72706436 | None:intergenic | 45.0% |
| !! | GTTAGAACACGGTTTTGTCC+CGG | + | chr4.4:72707363-72707382 | None:intergenic | 45.0% |
| !! | TGAAGGCACCAAACTGAACA+AGG | + | chr4.4:72704860-72704879 | None:intergenic | 45.0% |
| !!! | CATGGACCTGTTTTTACACC+AGG | - | chr4.4:72705692-72705711 | MS.gene48739:intron | 45.0% |
| !! | ATAAATAAATTTAAACTAAT+AGG | - | chr4.4:72707616-72707635 | MS.gene48739:CDS | 5.0% |
| AAGTGGCCATCACTTGGTAC+TGG | + | chr4.4:72706429-72706448 | None:intergenic | 50.0% | |
| ACATGAGTTAGAGCTGGTCG+AGG | - | chr4.4:72705565-72705584 | MS.gene48739:intron | 50.0% | |
| ACTTGTAATGCAGGGTGAGC+AGG | - | chr4.4:72707843-72707862 | MS.gene48739:CDS | 50.0% | |
| AGAAGAGTCGATGAGGGCAA+GGG | - | chr4.4:72705746-72705765 | MS.gene48739:intron | 50.0% | |
| CGGCCTAAAGGTTCTTGTCA+TGG | - | chr4.4:72707016-72707035 | MS.gene48739:CDS | 50.0% | |
| CTTTACAACAACCACGGCGA+TGG | + | chr4.4:72706367-72706386 | None:intergenic | 50.0% | |
| GACTGCTGAGCAACGTCTAA+TGG | - | chr4.4:72705929-72705948 | MS.gene48739:CDS | 50.0% | |
| GAGAAAGAGCAACAGCTACC+TGG | + | chr4.4:72705713-72705732 | None:intergenic | 50.0% | |
| GAGGGCAAGGGATCAACTTA+TGG | - | chr4.4:72705758-72705777 | MS.gene48739:intron | 50.0% | |
| GCGGGATCGAGAAATAAGCA+AGG | + | chr4.4:72704785-72704804 | None:intergenic | 50.0% | |
| GGATGCGATGTCACAACTGT+TGG | - | chr4.4:72707896-72707915 | MS.gene48739:CDS | 50.0% | |
| GTTCCAGAGAAACAACACGC+AGG | + | chr4.4:72707937-72707956 | None:intergenic | 50.0% | |
| TAGAAGAGTCGATGAGGGCA+AGG | - | chr4.4:72705745-72705764 | MS.gene48739:intron | 50.0% | |
| TATGGATGCCGACACGTACT+GGG | - | chr4.4:72705237-72705256 | MS.gene48739:intron | 50.0% | |
| TCATCACCAATCGCATGCAC+CGG | + | chr4.4:72706273-72706292 | None:intergenic | 50.0% | |
| TGCTGAGCAACGTCTAATGG+TGG | - | chr4.4:72705932-72705951 | MS.gene48739:CDS | 50.0% | |
| TGTAAAGCCCGAATCCTTCC+GGG | - | chr4.4:72706380-72706399 | MS.gene48739:intron | 50.0% | |
| TTATGGATGCCGACACGTAC+TGG | - | chr4.4:72705236-72705255 | MS.gene48739:intron | 50.0% | |
| TTGAGACAGCAGAACCCTGT+TGG | - | chr4.4:72705284-72705303 | MS.gene48739:intron | 50.0% | |
| ! | AATCCCATTGGAAGTGGGCT+TGG | - | chr4.4:72706654-72706673 | MS.gene48739:CDS | 50.0% |
| ! | CGGTAGAACTCTTGGGTTAG+AGG | - | chr4.4:72705205-72705224 | MS.gene48739:intron | 50.0% |
| !! | ATGCCTGCGTGTTGTTTCTC+TGG | - | chr4.4:72707931-72707950 | MS.gene48739:CDS | 50.0% |
| !!! | CGCCAAGGTTTTAACTGCAG+TGG | - | chr4.4:72704962-72704981 | MS.gene48739:CDS | 50.0% |
| AAGGCCAAGCCCACTTCCAA+TGG | + | chr4.4:72706661-72706680 | None:intergenic | 55.0% | |
| AGCTCCAACCCAGTACGTGT+CGG | + | chr4.4:72705248-72705267 | None:intergenic | 55.0% | |
| AGGCCAAGCCCACTTCCAAT+GGG | + | chr4.4:72706660-72706679 | None:intergenic | 55.0% | |
| CTGGGGCAGTAGTTGCCATT+CGG | - | chr4.4:72705426-72705445 | MS.gene48739:intron | 55.0% | |
| GATTTGCCGGTGCATGCGAT+TGG | - | chr4.4:72706264-72706283 | MS.gene48739:CDS | 55.0% | |
| GGTCGAGGTAGTTGCTGATC+AGG | - | chr4.4:72705580-72705599 | MS.gene48739:intron | 55.0% | |
| GTGAGCAGGTCAGCGACAAA+GGG | - | chr4.4:72707857-72707876 | MS.gene48739:CDS | 55.0% | |
| TGGGGCAGTAGTTGCCATTC+GGG | - | chr4.4:72705427-72705446 | MS.gene48739:intron | 55.0% | |
| !! | CGGTTTTGTCCCGGTTTGAG+TGG | + | chr4.4:72707354-72707373 | None:intergenic | 55.0% |
| !! | GGCCATCACTTGGTACTGGT+AGG | + | chr4.4:72706425-72706444 | None:intergenic | 55.0% |
| AGGCAGCATTTCCATCGCCG+TGG | - | chr4.4:72706353-72706372 | MS.gene48739:intron | 60.0% | |
| CGAATGGCAACTACTGCCCC+AGG | + | chr4.4:72705428-72705447 | None:intergenic | 60.0% | |
| GATGCCGACACGTACTGGGT+TGG | - | chr4.4:72705241-72705260 | MS.gene48739:intron | 60.0% | |
| GGTGAGCAGGTCAGCGACAA+AGG | - | chr4.4:72707856-72707875 | MS.gene48739:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 72704693 | 72708210 | 72704693 | ID=MS.gene48739 |
| chr4.4 | mRNA | 72704693 | 72708210 | 72704693 | ID=MS.gene48739.t1;Parent=MS.gene48739 |
| chr4.4 | exon | 72707302 | 72708210 | 72707302 | ID=MS.gene48739.t1.exon1;Parent=MS.gene48739.t1 |
| chr4.4 | CDS | 72707302 | 72708210 | 72707302 | ID=cds.MS.gene48739.t1;Parent=MS.gene48739.t1 |
| chr4.4 | exon | 72706821 | 72707189 | 72706821 | ID=MS.gene48739.t1.exon2;Parent=MS.gene48739.t1 |
| chr4.4 | CDS | 72706821 | 72707189 | 72706821 | ID=cds.MS.gene48739.t1;Parent=MS.gene48739.t1 |
| chr4.4 | exon | 72706439 | 72706705 | 72706439 | ID=MS.gene48739.t1.exon3;Parent=MS.gene48739.t1 |
| chr4.4 | CDS | 72706439 | 72706705 | 72706439 | ID=cds.MS.gene48739.t1;Parent=MS.gene48739.t1 |
| chr4.4 | exon | 72706209 | 72706336 | 72706209 | ID=MS.gene48739.t1.exon4;Parent=MS.gene48739.t1 |
| chr4.4 | CDS | 72706209 | 72706336 | 72706209 | ID=cds.MS.gene48739.t1;Parent=MS.gene48739.t1 |
| chr4.4 | exon | 72705855 | 72706052 | 72705855 | ID=MS.gene48739.t1.exon5;Parent=MS.gene48739.t1 |
| chr4.4 | CDS | 72705855 | 72706052 | 72705855 | ID=cds.MS.gene48739.t1;Parent=MS.gene48739.t1 |
| chr4.4 | exon | 72704693 | 72705047 | 72704693 | ID=MS.gene48739.t1.exon6;Parent=MS.gene48739.t1 |
| chr4.4 | CDS | 72704693 | 72705047 | 72704693 | ID=cds.MS.gene48739.t1;Parent=MS.gene48739.t1 |
| Gene Sequence |
| Protein sequence |
