Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49344.t1 | XP_013468576.1 | 87 | 193 | 25 | 0 | 1 | 193 | 1 | 193 | 3.70E-80 | 307.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49344.t1 | Q9LIC6 | 48.1 | 135 | 70 | 0 | 34 | 168 | 39 | 173 | 5.8e-26 | 119.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49344.t1 | A0A072VMF6 | 87.0 | 193 | 25 | 0 | 1 | 193 | 1 | 193 | 2.6e-80 | 307.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene51092 | MS.gene49344 | PPI |
MS.gene49344 | MS.gene94199 | PPI |
MS.gene76107 | MS.gene49344 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49344.t1 | MTR_1g070480 | 89.637 | 193 | 20 | 0 | 1 | 193 | 1 | 193 | 5.29e-113 | 320 |
MS.gene49344.t1 | MTR_7g096220 | 54.945 | 182 | 81 | 1 | 11 | 191 | 18 | 199 | 2.42e-64 | 197 |
MS.gene49344.t1 | MTR_2g100260 | 48.252 | 143 | 68 | 2 | 33 | 170 | 38 | 179 | 8.67e-37 | 126 |
MS.gene49344.t1 | MTR_3g012070 | 81.053 | 95 | 17 | 1 | 97 | 191 | 34 | 127 | 1.90e-36 | 125 |
MS.gene49344.t1 | MTR_1g080760 | 49.068 | 161 | 77 | 2 | 34 | 193 | 37 | 193 | 6.79e-34 | 119 |
MS.gene49344.t1 | MTR_6g092690 | 39.634 | 164 | 93 | 2 | 11 | 168 | 11 | 174 | 2.88e-33 | 118 |
MS.gene49344.t1 | MTR_4g014060 | 40.288 | 139 | 81 | 1 | 33 | 169 | 61 | 199 | 5.78e-31 | 112 |
MS.gene49344.t1 | MTR_0562s0010 | 40.288 | 139 | 81 | 1 | 33 | 169 | 61 | 199 | 5.78e-31 | 112 |
MS.gene49344.t1 | MTR_5g083490 | 34.184 | 196 | 109 | 2 | 6 | 181 | 8 | 203 | 4.08e-29 | 107 |
MS.gene49344.t1 | MTR_2g100270 | 46.784 | 171 | 81 | 2 | 9 | 169 | 3 | 173 | 1.20e-27 | 103 |
MS.gene49344.t1 | MTR_8g016150 | 38.788 | 165 | 93 | 1 | 7 | 163 | 2 | 166 | 6.70e-26 | 98.6 |
MS.gene49344.t1 | MTR_1g093090 | 46.914 | 81 | 41 | 1 | 33 | 111 | 24 | 104 | 1.31e-17 | 77.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene49344.t1 | AT1G04260 | 42.045 | 176 | 102 | 0 | 18 | 193 | 7 | 182 | 4.07e-47 | 152 |
MS.gene49344.t1 | AT1G55190 | 52.448 | 143 | 68 | 0 | 26 | 168 | 31 | 173 | 6.99e-42 | 139 |
MS.gene49344.t1 | AT3G13710 | 43.373 | 166 | 80 | 1 | 17 | 168 | 8 | 173 | 1.10e-39 | 134 |
MS.gene49344.t1 | AT1G08770 | 41.808 | 177 | 99 | 2 | 17 | 191 | 33 | 207 | 4.71e-35 | 122 |
MS.gene49344.t1 | AT3G13720 | 46.528 | 144 | 77 | 0 | 25 | 168 | 30 | 173 | 5.39e-35 | 122 |
MS.gene49344.t1 | AT5G01640 | 39.333 | 150 | 89 | 1 | 33 | 180 | 56 | 205 | 9.21e-31 | 112 |
MS.gene49344.t1 | AT2G38360 | 35.099 | 151 | 96 | 1 | 33 | 181 | 56 | 206 | 6.45e-29 | 107 |
MS.gene49344.t1 | AT2G40380 | 42.000 | 150 | 85 | 1 | 33 | 180 | 48 | 197 | 1.08e-28 | 106 |
MS.gene49344.t1 | AT5G56230 | 35.196 | 179 | 107 | 4 | 6 | 177 | 6 | 182 | 1.84e-26 | 100 |
MS.gene49344.t1 | AT3G56110 | 39.456 | 147 | 87 | 1 | 33 | 177 | 46 | 192 | 8.71e-26 | 99.0 |
MS.gene49344.t1 | AT3G56110 | 39.456 | 147 | 87 | 1 | 33 | 177 | 46 | 192 | 8.71e-26 | 99.0 |
MS.gene49344.t1 | AT3G56110 | 39.456 | 147 | 87 | 1 | 33 | 177 | 46 | 192 | 8.71e-26 | 99.0 |
MS.gene49344.t1 | AT3G56110 | 39.456 | 147 | 87 | 1 | 33 | 177 | 46 | 192 | 8.71e-26 | 99.0 |
MS.gene49344.t1 | AT1G17700 | 40.278 | 144 | 86 | 0 | 26 | 169 | 31 | 174 | 3.14e-25 | 96.7 |
MS.gene49344.t1 | AT5G07110 | 36.552 | 145 | 90 | 1 | 33 | 175 | 46 | 190 | 3.09e-24 | 95.1 |
MS.gene49344.t1 | AT5G05380 | 41.497 | 147 | 84 | 1 | 33 | 177 | 49 | 195 | 1.61e-23 | 93.2 |
MS.gene49344.t1 | AT5G05380 | 41.497 | 147 | 84 | 1 | 33 | 177 | 92 | 238 | 3.22e-23 | 93.6 |
MS.gene49344.t1 | AT5G05380 | 41.497 | 147 | 84 | 1 | 33 | 177 | 100 | 246 | 3.42e-23 | 93.6 |
MS.gene49344.t1 | AT5G05380 | 41.497 | 147 | 84 | 1 | 33 | 177 | 116 | 262 | 5.51e-23 | 93.2 |
MS.gene49344.t1 | AT1G55640 | 31.387 | 137 | 94 | 0 | 34 | 170 | 41 | 177 | 3.31e-18 | 78.6 |
MS.gene49344.t1 | AT4G29658 | 33.803 | 142 | 90 | 1 | 33 | 170 | 36 | 177 | 1.87e-15 | 71.6 |
Find 71 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATGAAGAAGAGATCTTTGA+TGG | 0.279860 | 1.1:+53063939 | MS.gene49344:CDS |
TTGGAAGGTGGGGTGGCGCG+TGG | 0.324938 | 1.1:-53063501 | None:intergenic |
GTGAGGGAGAGTGAAGGATT+GGG | 0.331674 | 1.1:-53063562 | None:intergenic |
GGTAGAGGAGGCTGAGGAAG+AGG | 0.352812 | 1.1:-53063665 | None:intergenic |
GAAGGGAGAGAGTTGTAAGT+TGG | 0.355663 | 1.1:-53063465 | None:intergenic |
TCCTCGCCGTCTTCGCCGCT+TGG | 0.362575 | 1.1:+53063709 | MS.gene49344:CDS |
GGAAGGTGGGGTGGCGCGTG+GGG | 0.374482 | 1.1:-53063499 | None:intergenic |
CACGTGGGGTAGTTGGAAGG+TGG | 0.378025 | 1.1:-53063513 | None:intergenic |
TGAGGGAGAGAGGGTGGTAG+AGG | 0.379952 | 1.1:-53063680 | None:intergenic |
GGTGATTTACTTTCAGTTGT+TGG | 0.381427 | 1.1:+53063960 | MS.gene49344:CDS |
GTAAGTTGGAGTGGGATAGA+TGG | 0.383602 | 1.1:-53063451 | None:intergenic |
AGTGAGGGAGAGTGAAGGAT+TGG | 0.391419 | 1.1:-53063563 | None:intergenic |
CGCTCGTCTTCACCGGCGTC+TGG | 0.396795 | 1.1:+53063832 | MS.gene49344:CDS |
GTGGTTTCGGAGAGGGAGTG+AGG | 0.418352 | 1.1:-53063579 | None:intergenic |
GGAGGCTGAGGAAGAGGATG+AGG | 0.423523 | 1.1:-53063659 | None:intergenic |
GAAGAACCAAGCGGCGAAGA+CGG | 0.427174 | 1.1:-53063715 | None:intergenic |
GAGGGTGGTAGAGGAGGCTG+AGG | 0.433438 | 1.1:-53063671 | None:intergenic |
TGGGAGGCACGTGGGGTAGT+TGG | 0.435134 | 1.1:-53063520 | None:intergenic |
GGGGTAGTTGGAAGGTGGGG+TGG | 0.436768 | 1.1:-53063508 | None:intergenic |
TGGTTTCGGAGAGGGAGTGA+GGG | 0.443935 | 1.1:-53063578 | None:intergenic |
GGGAGAGAGGGTGGTAGAGG+AGG | 0.457006 | 1.1:-53063677 | None:intergenic |
AGGAAGACGATGAGGGAGAG+AGG | 0.457920 | 1.1:-53063690 | None:intergenic |
TGGAAGGTGGGGTGGCGCGT+GGG | 0.467570 | 1.1:-53063500 | None:intergenic |
TGAGGGAGAGTGAAGGATTG+GGG | 0.470927 | 1.1:-53063561 | None:intergenic |
GGCTGAGGAAGAGGATGAGG+AGG | 0.474629 | 1.1:-53063656 | None:intergenic |
ACGGAGGGTGGTTTCGGAGA+GGG | 0.477533 | 1.1:-53063586 | None:intergenic |
CGTGGGGAAGTTGAGTTTGA+AGG | 0.477570 | 1.1:-53063483 | None:intergenic |
CGTGGGGTAGTTGGAAGGTG+GGG | 0.481724 | 1.1:-53063511 | None:intergenic |
GTCCTCGTGTCGGTGCTCTT+CGG | 0.484352 | 1.1:+53063861 | MS.gene49344:CDS |
GAGAGAGTTGTAAGTTGGAG+TGG | 0.502950 | 1.1:-53063460 | None:intergenic |
AGTTGATGCGGAAGTGGTTG+AGG | 0.503368 | 1.1:-53063620 | None:intergenic |
AGACGATGAGGGAGAGAGGG+TGG | 0.503783 | 1.1:-53063686 | None:intergenic |
GTCGTCGCGCTCGTCTTCAC+CGG | 0.504856 | 1.1:+53063825 | MS.gene49344:CDS |
CTTCTTCTTCCGTGACCACC+CGG | 0.507928 | 1.1:+53063740 | MS.gene49344:CDS |
AGAGAGTTGTAAGTTGGAGT+GGG | 0.514057 | 1.1:-53063459 | None:intergenic |
ACGTGGGGTAGTTGGAAGGT+GGG | 0.516248 | 1.1:-53063512 | None:intergenic |
GAGGATGAGGAGGATGATGA+TGG | 0.521356 | 1.1:-53063646 | None:intergenic |
AGAGTAGAATGAGGAGGAAG+CGG | 0.522523 | 1.1:-53063791 | None:intergenic |
GAGGGAGTGAGGGAGAGTGA+AGG | 0.523179 | 1.1:-53063568 | None:intergenic |
TCTAGTGTACCTCGTTCGCT+TGG | 0.528961 | 1.1:-53063997 | None:intergenic |
AGCGGTCGTCGATGGTGAAA+CGG | 0.536990 | 1.1:-53063773 | None:intergenic |
GTGAAACGGAAGAGGACGAC+CGG | 0.538948 | 1.1:-53063759 | None:intergenic |
AGGCACGTGGGGTAGTTGGA+AGG | 0.547236 | 1.1:-53063516 | None:intergenic |
AGAGGACGACCGGGTGGTCA+CGG | 0.547677 | 1.1:-53063749 | None:intergenic |
CGTCGATGGTGAAACGGAAG+AGG | 0.553573 | 1.1:-53063767 | None:intergenic |
GTGGGGAAGTTGAGTTTGAA+GGG | 0.558559 | 1.1:-53063482 | None:intergenic |
GAGGAGGAAGCGGTCGTCGA+TGG | 0.560409 | 1.1:-53063781 | None:intergenic |
GTCGGTGCTCTTCGGTGCTG+CGG | 0.562357 | 1.1:+53063869 | MS.gene49344:CDS |
ACTACCCCACGTGCCTCCCA+TGG | 0.562455 | 1.1:+53063523 | MS.gene49344:CDS |
CTGGCTTAACGTCCTCGTGT+CGG | 0.579627 | 1.1:+53063851 | MS.gene49344:CDS |
GGTGCTCTTCGGTGCTGCGG+TGG | 0.582059 | 1.1:+53063872 | MS.gene49344:CDS |
TGGCGTAGTTGATGCGGAAG+TGG | 0.582115 | 1.1:-53063626 | None:intergenic |
GGAAGACGATGAGGGAGAGA+GGG | 0.595788 | 1.1:-53063689 | None:intergenic |
TTTGCCATGGGAGGCACGTG+GGG | 0.597252 | 1.1:-53063527 | None:intergenic |
GGGCAGAGAGTAGAATGAGG+AGG | 0.599319 | 1.1:-53063797 | None:intergenic |
CACCGAAGAGCACCGACACG+AGG | 0.603948 | 1.1:-53063863 | None:intergenic |
GGTGGTCACGGAAGAAGAAG+AGG | 0.608401 | 1.1:-53063737 | None:intergenic |
GACGAGCGCGACGACTGTGA+GGG | 0.612183 | 1.1:-53063817 | None:intergenic |
ACCAAGCGGCGAAGACGGCG+AGG | 0.613183 | 1.1:-53063710 | None:intergenic |
TACGGAGGGTGGTTTCGGAG+AGG | 0.616601 | 1.1:-53063587 | None:intergenic |
TGAGGGCAGAGAGTAGAATG+AGG | 0.616996 | 1.1:-53063800 | None:intergenic |
GATTTACTTTCAGTTGTTGG+TGG | 0.624407 | 1.1:+53063963 | MS.gene49344:CDS |
AGACGGCGAGGAAGACGATG+AGG | 0.634290 | 1.1:-53063698 | None:intergenic |
GACGGCGAGGAAGACGATGA+GGG | 0.639915 | 1.1:-53063697 | None:intergenic |
TGAAACGGAAGAGGACGACC+GGG | 0.651587 | 1.1:-53063758 | None:intergenic |
AGACGAGCGCGACGACTGTG+AGG | 0.675858 | 1.1:-53063818 | None:intergenic |
TGATGATGGCGTAGTTGATG+CGG | 0.679858 | 1.1:-53063632 | None:intergenic |
GCTTCAATACCAAGCGAACG+AGG | 0.681179 | 1.1:+53063988 | MS.gene49344:CDS |
GAAGAAGAGGAAGAACCAAG+CGG | 0.686040 | 1.1:-53063724 | None:intergenic |
GAGGACGTTAAGCCAGACGC+CGG | 0.719336 | 1.1:-53063844 | None:intergenic |
AACGGAAGAGGACGACCGGG+TGG | 0.723292 | 1.1:-53063755 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
GATGAAGAAGAGATCTTTGA+TGG | + | chr1.1:53063939-53063958 | MS.gene49344:CDS | 35.0% | |
GATTTACTTTCAGTTGTTGG+TGG | + | chr1.1:53063963-53063982 | MS.gene49344:CDS | 35.0% | |
GGTGATTTACTTTCAGTTGT+TGG | + | chr1.1:53063960-53063979 | MS.gene49344:CDS | 35.0% | |
! | AGAGAGTTGTAAGTTGGAGT+GGG | - | chr1.1:53063462-53063481 | None:intergenic | 40.0% |
! | GAGTGAAGAAGTTTTGCCAT+GGG | - | chr1.1:53063542-53063561 | None:intergenic | 40.0% |
! | GGTTGAGGTTGCGTTTTATA+CGG | - | chr1.1:53063608-53063627 | None:intergenic | 40.0% |
! | TTTTATACGGAGGGTGGTTT+CGG | - | chr1.1:53063595-53063614 | None:intergenic | 40.0% |
AGAGTAGAATGAGGAGGAAG+CGG | - | chr1.1:53063794-53063813 | None:intergenic | 45.0% | |
GAAGAAGAGGAAGAACCAAG+CGG | - | chr1.1:53063727-53063746 | None:intergenic | 45.0% | |
GAAGGGAGAGAGTTGTAAGT+TGG | - | chr1.1:53063468-53063487 | None:intergenic | 45.0% | |
GTGGGGAAGTTGAGTTTGAA+GGG | - | chr1.1:53063485-53063504 | None:intergenic | 45.0% | |
! | GAGAGAGTTGTAAGTTGGAG+TGG | - | chr1.1:53063463-53063482 | None:intergenic | 45.0% |
! | GAGGTTGCGTTTTATACGGA+GGG | - | chr1.1:53063604-53063623 | None:intergenic | 45.0% |
! | GGAGTGAAGAAGTTTTGCCA+TGG | - | chr1.1:53063543-53063562 | None:intergenic | 45.0% |
! | GTAAGTTGGAGTGGGATAGA+TGG | - | chr1.1:53063454-53063473 | None:intergenic | 45.0% |
! | TGAAGAAGTTTTGCCATGGG+AGG | - | chr1.1:53063539-53063558 | None:intergenic | 45.0% |
! | TGAGGTTGCGTTTTATACGG+AGG | - | chr1.1:53063605-53063624 | None:intergenic | 45.0% |
!! | TGATGATGGCGTAGTTGATG+CGG | - | chr1.1:53063635-53063654 | None:intergenic | 45.0% |
!! | TTGTTTTGCATGCGGCGTTT+CGG | + | chr1.1:53063895-53063914 | MS.gene49344:CDS | 45.0% |
AGTGAGGGAGAGTGAAGGAT+TGG | - | chr1.1:53063566-53063585 | None:intergenic | 50.0% | |
CGTGGGGAAGTTGAGTTTGA+AGG | - | chr1.1:53063486-53063505 | None:intergenic | 50.0% | |
GAGGATGAGGAGGATGATGA+TGG | - | chr1.1:53063649-53063668 | None:intergenic | 50.0% | |
GCTTCAATACCAAGCGAACG+AGG | + | chr1.1:53063988-53064007 | MS.gene49344:CDS | 50.0% | |
GTGAGGGAGAGTGAAGGATT+GGG | - | chr1.1:53063565-53063584 | None:intergenic | 50.0% | |
TCTAGTGTACCTCGTTCGCT+TGG | - | chr1.1:53064000-53064019 | None:intergenic | 50.0% | |
TGAGGGAGAGTGAAGGATTG+GGG | - | chr1.1:53063564-53063583 | None:intergenic | 50.0% | |
TGAGGGCAGAGAGTAGAATG+AGG | - | chr1.1:53063803-53063822 | None:intergenic | 50.0% | |
! | AGTTGATGCGGAAGTGGTTG+AGG | - | chr1.1:53063623-53063642 | None:intergenic | 50.0% |
! | GTTGCGTTTTATACGGAGGG+TGG | - | chr1.1:53063601-53063620 | None:intergenic | 50.0% |
!! | TGCGGTGGTTGTTTTGCATG+CGG | + | chr1.1:53063887-53063906 | MS.gene49344:CDS | 50.0% |
ACGTGGGGTAGTTGGAAGGT+GGG | - | chr1.1:53063515-53063534 | None:intergenic | 55.0% | |
AGCGGTCGTCGATGGTGAAA+CGG | - | chr1.1:53063776-53063795 | None:intergenic | 55.0% | |
AGGAAGACGATGAGGGAGAG+AGG | - | chr1.1:53063693-53063712 | None:intergenic | 55.0% | |
CGTCGATGGTGAAACGGAAG+AGG | - | chr1.1:53063770-53063789 | None:intergenic | 55.0% | |
CTGGCTTAACGTCCTCGTGT+CGG | + | chr1.1:53063851-53063870 | MS.gene49344:CDS | 55.0% | |
CTTCTTCTTCCGTGACCACC+CGG | + | chr1.1:53063740-53063759 | MS.gene49344:CDS | 55.0% | |
GAAGAACCAAGCGGCGAAGA+CGG | - | chr1.1:53063718-53063737 | None:intergenic | 55.0% | |
GGAAGACGATGAGGGAGAGA+GGG | - | chr1.1:53063692-53063711 | None:intergenic | 55.0% | |
GGGCAGAGAGTAGAATGAGG+AGG | - | chr1.1:53063800-53063819 | None:intergenic | 55.0% | |
GGTGGTCACGGAAGAAGAAG+AGG | - | chr1.1:53063740-53063759 | None:intergenic | 55.0% | |
GTGAAACGGAAGAGGACGAC+CGG | - | chr1.1:53063762-53063781 | None:intergenic | 55.0% | |
TGAAACGGAAGAGGACGACC+GGG | - | chr1.1:53063761-53063780 | None:intergenic | 55.0% | |
TGGTTTCGGAGAGGGAGTGA+GGG | - | chr1.1:53063581-53063600 | None:intergenic | 55.0% | |
! | TGGCGTAGTTGATGCGGAAG+TGG | - | chr1.1:53063629-53063648 | None:intergenic | 55.0% |
!! | TTTTGCCATGGGAGGCACGT+GGG | - | chr1.1:53063531-53063550 | None:intergenic | 55.0% |
ACGGAGGGTGGTTTCGGAGA+GGG | - | chr1.1:53063589-53063608 | None:intergenic | 60.0% | |
AGACGATGAGGGAGAGAGGG+TGG | - | chr1.1:53063689-53063708 | None:intergenic | 60.0% | |
AGACGGCGAGGAAGACGATG+AGG | - | chr1.1:53063701-53063720 | None:intergenic | 60.0% | |
AGGCACGTGGGGTAGTTGGA+AGG | - | chr1.1:53063519-53063538 | None:intergenic | 60.0% | |
CACGTGGGGTAGTTGGAAGG+TGG | - | chr1.1:53063516-53063535 | None:intergenic | 60.0% | |
CGTGGGGTAGTTGGAAGGTG+GGG | - | chr1.1:53063514-53063533 | None:intergenic | 60.0% | |
GACGGCGAGGAAGACGATGA+GGG | - | chr1.1:53063700-53063719 | None:intergenic | 60.0% | |
GAGGACGTTAAGCCAGACGC+CGG | - | chr1.1:53063847-53063866 | None:intergenic | 60.0% | |
GAGGGAGTGAGGGAGAGTGA+AGG | - | chr1.1:53063571-53063590 | None:intergenic | 60.0% | |
GGAGGCTGAGGAAGAGGATG+AGG | - | chr1.1:53063662-53063681 | None:intergenic | 60.0% | |
GGCTGAGGAAGAGGATGAGG+AGG | - | chr1.1:53063659-53063678 | None:intergenic | 60.0% | |
GGTAGAGGAGGCTGAGGAAG+AGG | - | chr1.1:53063668-53063687 | None:intergenic | 60.0% | |
GTGGTTTCGGAGAGGGAGTG+AGG | - | chr1.1:53063582-53063601 | None:intergenic | 60.0% | |
TACGGAGGGTGGTTTCGGAG+AGG | - | chr1.1:53063590-53063609 | None:intergenic | 60.0% | |
TGAGGGAGAGAGGGTGGTAG+AGG | - | chr1.1:53063683-53063702 | None:intergenic | 60.0% | |
! | GTCCTCGTGTCGGTGCTCTT+CGG | + | chr1.1:53063861-53063880 | MS.gene49344:CDS | 60.0% |
! | TTTGCCATGGGAGGCACGTG+GGG | - | chr1.1:53063530-53063549 | None:intergenic | 60.0% |
!! | GTTTTGCCATGGGAGGCACG+TGG | - | chr1.1:53063532-53063551 | None:intergenic | 60.0% |
AACGGAAGAGGACGACCGGG+TGG | - | chr1.1:53063758-53063777 | None:intergenic | 65.0% | |
ACTACCCCACGTGCCTCCCA+TGG | + | chr1.1:53063523-53063542 | MS.gene49344:CDS | 65.0% | |
AGACGAGCGCGACGACTGTG+AGG | - | chr1.1:53063821-53063840 | None:intergenic | 65.0% | |
AGAGGACGACCGGGTGGTCA+CGG | - | chr1.1:53063752-53063771 | None:intergenic | 65.0% | |
GACGAGCGCGACGACTGTGA+GGG | - | chr1.1:53063820-53063839 | None:intergenic | 65.0% | |
GAGGAGGAAGCGGTCGTCGA+TGG | - | chr1.1:53063784-53063803 | None:intergenic | 65.0% | |
GAGGGTGGTAGAGGAGGCTG+AGG | - | chr1.1:53063674-53063693 | None:intergenic | 65.0% | |
GGGAGAGAGGGTGGTAGAGG+AGG | - | chr1.1:53063680-53063699 | None:intergenic | 65.0% | |
GGGGTAGTTGGAAGGTGGGG+TGG | - | chr1.1:53063511-53063530 | None:intergenic | 65.0% | |
GTCGTCGCGCTCGTCTTCAC+CGG | + | chr1.1:53063825-53063844 | MS.gene49344:CDS | 65.0% | |
! | TGGGAGGCACGTGGGGTAGT+TGG | - | chr1.1:53063523-53063542 | None:intergenic | 65.0% |
!! | CACCGAAGAGCACCGACACG+AGG | - | chr1.1:53063866-53063885 | None:intergenic | 65.0% |
!! | GTCGGTGCTCTTCGGTGCTG+CGG | + | chr1.1:53063869-53063888 | MS.gene49344:CDS | 65.0% |
ACCAAGCGGCGAAGACGGCG+AGG | - | chr1.1:53063713-53063732 | None:intergenic | 70.0% | |
CGCTCGTCTTCACCGGCGTC+TGG | + | chr1.1:53063832-53063851 | MS.gene49344:CDS | 70.0% | |
TCCTCGCCGTCTTCGCCGCT+TGG | + | chr1.1:53063709-53063728 | MS.gene49344:CDS | 70.0% | |
TGGAAGGTGGGGTGGCGCGT+GGG | - | chr1.1:53063503-53063522 | None:intergenic | 70.0% | |
TTGGAAGGTGGGGTGGCGCG+TGG | - | chr1.1:53063504-53063523 | None:intergenic | 70.0% | |
!! | GGTGCTCTTCGGTGCTGCGG+TGG | + | chr1.1:53063872-53063891 | MS.gene49344:CDS | 70.0% |
GGAAGGTGGGGTGGCGCGTG+GGG | - | chr1.1:53063502-53063521 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 53063444 | 53064025 | 53063444 | ID=MS.gene49344 |
chr1.1 | mRNA | 53063444 | 53064025 | 53063444 | ID=MS.gene49344.t1;Parent=MS.gene49344 |
chr1.1 | exon | 53063444 | 53064025 | 53063444 | ID=MS.gene49344.t1.exon1;Parent=MS.gene49344.t1 |
chr1.1 | CDS | 53063444 | 53064025 | 53063444 | ID=cds.MS.gene49344.t1;Parent=MS.gene49344.t1 |
Gene Sequence |
Protein sequence |