Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49353.t1 | XP_003590536.1 | 99.6 | 282 | 1 | 0 | 1 | 282 | 1 | 282 | 1.20E-151 | 545.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49353.t1 | O22768 | 70.7 | 307 | 63 | 7 | 2 | 281 | 3 | 309 | 1.2e-104 | 380.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49353.t1 | G7ICM9 | 99.6 | 282 | 1 | 0 | 1 | 282 | 1 | 282 | 8.4e-152 | 545.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene49353.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39915 | MS.gene49353 | PPI |
| MS.gene49353 | MS.gene042288 | PPI |
| MS.gene035577 | MS.gene49353 | PPI |
| MS.gene50572 | MS.gene49353 | PPI |
| MS.gene012581 | MS.gene49353 | PPI |
| MS.gene036160 | MS.gene49353 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49353.t1 | MTR_1g070870 | 99.645 | 282 | 1 | 0 | 1 | 282 | 1 | 282 | 0.0 | 576 |
| MS.gene49353.t1 | MTR_1g070870 | 98.596 | 285 | 1 | 1 | 1 | 282 | 1 | 285 | 0.0 | 570 |
| MS.gene49353.t1 | MTR_1g080890 | 80.571 | 175 | 34 | 0 | 104 | 278 | 177 | 351 | 3.84e-97 | 290 |
| MS.gene49353.t1 | MTR_4g131160 | 65.854 | 164 | 46 | 3 | 108 | 262 | 184 | 346 | 1.90e-63 | 204 |
| MS.gene49353.t1 | MTR_4g131160 | 65.854 | 164 | 46 | 3 | 108 | 262 | 187 | 349 | 2.12e-63 | 204 |
| MS.gene49353.t1 | MTR_1g017350 | 51.579 | 95 | 45 | 1 | 91 | 184 | 231 | 325 | 1.29e-22 | 96.7 |
| MS.gene49353.t1 | MTR_1g017350 | 51.579 | 95 | 45 | 1 | 91 | 184 | 231 | 325 | 1.39e-22 | 96.7 |
| MS.gene49353.t1 | MTR_1g017350 | 51.579 | 95 | 45 | 1 | 91 | 184 | 231 | 325 | 1.72e-22 | 96.7 |
| MS.gene49353.t1 | MTR_1g017350 | 51.579 | 95 | 45 | 1 | 91 | 184 | 231 | 325 | 1.83e-22 | 96.3 |
| MS.gene49353.t1 | MTR_7g053410 | 60.000 | 75 | 29 | 1 | 111 | 184 | 308 | 382 | 5.71e-22 | 95.5 |
| MS.gene49353.t1 | MTR_7g053410 | 60.000 | 75 | 29 | 1 | 111 | 184 | 308 | 382 | 5.88e-22 | 95.5 |
| MS.gene49353.t1 | MTR_8g012290 | 60.000 | 75 | 29 | 1 | 111 | 184 | 282 | 356 | 9.70e-22 | 94.7 |
| MS.gene49353.t1 | MTR_3g498825 | 48.980 | 98 | 49 | 1 | 112 | 208 | 139 | 236 | 9.86e-22 | 93.2 |
| MS.gene49353.t1 | MTR_8g012290 | 60.000 | 75 | 29 | 1 | 111 | 184 | 282 | 356 | 1.01e-21 | 94.7 |
| MS.gene49353.t1 | MTR_3g116770 | 65.152 | 66 | 22 | 1 | 120 | 184 | 191 | 256 | 6.28e-21 | 91.7 |
| MS.gene49353.t1 | MTR_3g116770 | 65.152 | 66 | 22 | 1 | 120 | 184 | 191 | 256 | 6.46e-21 | 91.7 |
| MS.gene49353.t1 | MTR_8g065740 | 63.636 | 66 | 23 | 1 | 120 | 184 | 305 | 370 | 3.87e-20 | 90.1 |
| MS.gene49353.t1 | MTR_4g070320 | 63.636 | 66 | 23 | 1 | 120 | 184 | 143 | 208 | 4.60e-20 | 89.0 |
| MS.gene49353.t1 | MTR_5g037250 | 56.000 | 75 | 32 | 1 | 111 | 184 | 103 | 177 | 7.36e-20 | 86.3 |
| MS.gene49353.t1 | MTR_5g048860 | 62.687 | 67 | 24 | 1 | 119 | 184 | 364 | 430 | 8.83e-20 | 89.4 |
| MS.gene49353.t1 | MTR_8g062240 | 60.606 | 66 | 25 | 1 | 120 | 184 | 151 | 216 | 1.87e-19 | 86.3 |
| MS.gene49353.t1 | MTR_8g099880 | 50.588 | 85 | 37 | 2 | 119 | 202 | 144 | 224 | 2.16e-19 | 86.7 |
| MS.gene49353.t1 | MTR_4g033295 | 61.538 | 65 | 24 | 1 | 119 | 182 | 117 | 181 | 1.51e-18 | 81.6 |
| MS.gene49353.t1 | MTR_4g033295 | 62.121 | 66 | 24 | 1 | 119 | 183 | 117 | 182 | 2.57e-18 | 81.3 |
| MS.gene49353.t1 | MTR_1g084980 | 50.000 | 74 | 33 | 1 | 122 | 195 | 464 | 533 | 9.47e-18 | 83.6 |
| MS.gene49353.t1 | MTR_1g072530 | 33.571 | 140 | 81 | 1 | 126 | 265 | 190 | 317 | 9.67e-18 | 82.0 |
| MS.gene49353.t1 | MTR_1g018090 | 58.462 | 65 | 27 | 0 | 119 | 183 | 273 | 337 | 1.59e-17 | 82.0 |
| MS.gene49353.t1 | MTR_1g052470 | 54.667 | 75 | 33 | 1 | 113 | 186 | 291 | 365 | 2.04e-17 | 81.6 |
| MS.gene49353.t1 | MTR_3g103030 | 48.780 | 82 | 42 | 0 | 119 | 200 | 228 | 309 | 3.39e-17 | 80.5 |
| MS.gene49353.t1 | MTR_1g059270 | 48.864 | 88 | 39 | 3 | 119 | 205 | 159 | 241 | 3.71e-17 | 79.3 |
| MS.gene49353.t1 | MTR_1g059270 | 48.864 | 88 | 39 | 3 | 119 | 205 | 159 | 241 | 4.25e-17 | 80.1 |
| MS.gene49353.t1 | MTR_1g069155 | 50.000 | 72 | 32 | 1 | 122 | 193 | 319 | 386 | 5.12e-17 | 81.3 |
| MS.gene49353.t1 | MTR_7g099540 | 50.000 | 72 | 32 | 1 | 122 | 193 | 254 | 321 | 5.31e-17 | 80.9 |
| MS.gene49353.t1 | MTR_5g005110 | 56.923 | 65 | 28 | 0 | 119 | 183 | 223 | 287 | 7.11e-17 | 79.7 |
| MS.gene49353.t1 | MTR_1g019240 | 42.697 | 89 | 44 | 2 | 100 | 188 | 71 | 152 | 8.82e-17 | 78.6 |
| MS.gene49353.t1 | MTR_7g092510 | 56.716 | 67 | 28 | 1 | 119 | 184 | 172 | 238 | 4.57e-16 | 77.4 |
| MS.gene49353.t1 | MTR_7g110810 | 53.571 | 56 | 26 | 0 | 131 | 186 | 213 | 268 | 5.16e-16 | 77.4 |
| MS.gene49353.t1 | MTR_1g106470 | 51.316 | 76 | 37 | 0 | 108 | 183 | 184 | 259 | 5.91e-16 | 76.6 |
| MS.gene49353.t1 | MTR_7g099540 | 45.070 | 71 | 39 | 0 | 122 | 192 | 254 | 324 | 8.64e-16 | 77.4 |
| MS.gene49353.t1 | MTR_2g098310 | 56.061 | 66 | 28 | 1 | 119 | 183 | 331 | 396 | 9.30e-16 | 77.0 |
| MS.gene49353.t1 | MTR_3g101810 | 48.750 | 80 | 40 | 1 | 113 | 192 | 164 | 242 | 1.72e-15 | 75.1 |
| MS.gene49353.t1 | MTR_7g111320 | 47.368 | 76 | 37 | 1 | 122 | 197 | 434 | 506 | 1.86e-15 | 76.6 |
| MS.gene49353.t1 | MTR_8g036235 | 52.174 | 69 | 32 | 1 | 119 | 186 | 315 | 383 | 2.10e-15 | 75.9 |
| MS.gene49353.t1 | MTR_7g092540 | 47.561 | 82 | 33 | 2 | 103 | 183 | 235 | 307 | 2.26e-15 | 75.1 |
| MS.gene49353.t1 | MTR_7g092540 | 45.882 | 85 | 36 | 2 | 103 | 186 | 235 | 310 | 2.78e-15 | 75.1 |
| MS.gene49353.t1 | MTR_3g449770 | 49.206 | 63 | 32 | 0 | 122 | 184 | 311 | 373 | 2.93e-15 | 75.9 |
| MS.gene49353.t1 | MTR_4g065870 | 53.623 | 69 | 31 | 1 | 119 | 186 | 354 | 422 | 3.08e-15 | 75.5 |
| MS.gene49353.t1 | MTR_5g079500 | 41.304 | 92 | 50 | 2 | 93 | 183 | 193 | 281 | 3.93e-15 | 74.3 |
| MS.gene49353.t1 | MTR_2g098310 | 55.385 | 65 | 28 | 1 | 119 | 182 | 331 | 395 | 7.41e-15 | 74.3 |
| MS.gene49353.t1 | MTR_1g106460 | 47.059 | 68 | 36 | 0 | 116 | 183 | 234 | 301 | 8.26e-15 | 73.6 |
| MS.gene49353.t1 | MTR_5g017040 | 41.304 | 92 | 46 | 2 | 131 | 217 | 116 | 204 | 1.64e-14 | 73.2 |
| MS.gene49353.t1 | MTR_8g093500 | 49.333 | 75 | 38 | 0 | 108 | 182 | 102 | 176 | 2.00e-14 | 72.0 |
| MS.gene49353.t1 | MTR_1g072530 | 33.333 | 126 | 72 | 1 | 126 | 251 | 190 | 303 | 2.90e-14 | 72.0 |
| MS.gene49353.t1 | MTR_6g084120 | 57.627 | 59 | 24 | 1 | 120 | 177 | 155 | 213 | 3.25e-14 | 71.2 |
| MS.gene49353.t1 | MTR_3g028520 | 53.030 | 66 | 30 | 1 | 119 | 183 | 321 | 386 | 9.17e-14 | 71.2 |
| MS.gene49353.t1 | MTR_3g027650 | 53.030 | 66 | 30 | 1 | 119 | 183 | 321 | 386 | 9.17e-14 | 71.2 |
| MS.gene49353.t1 | MTR_4g065870 | 53.968 | 63 | 28 | 1 | 119 | 180 | 354 | 416 | 1.04e-13 | 70.9 |
| MS.gene49353.t1 | MTR_3g027650 | 54.688 | 64 | 28 | 1 | 119 | 181 | 321 | 384 | 4.19e-13 | 69.3 |
| MS.gene49353.t1 | MTR_1g106480 | 50.000 | 66 | 33 | 0 | 119 | 184 | 68 | 133 | 5.48e-13 | 65.9 |
| MS.gene49353.t1 | MTR_7g069590 | 47.170 | 53 | 28 | 0 | 127 | 179 | 33 | 85 | 6.90e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49353.t1 | AT4G02590 | 70.358 | 307 | 64 | 7 | 2 | 281 | 3 | 309 | 8.94e-130 | 371 |
| MS.gene49353.t1 | AT4G02590 | 70.358 | 307 | 64 | 7 | 2 | 281 | 3 | 309 | 8.94e-130 | 371 |
| MS.gene49353.t1 | AT4G02590 | 78.723 | 235 | 44 | 4 | 53 | 281 | 12 | 246 | 1.92e-115 | 332 |
| MS.gene49353.t1 | AT1G03040 | 68.919 | 296 | 62 | 8 | 8 | 282 | 16 | 302 | 1.55e-112 | 327 |
| MS.gene49353.t1 | AT1G03040 | 63.240 | 321 | 69 | 7 | 8 | 282 | 16 | 333 | 3.63e-108 | 317 |
| MS.gene49353.t1 | AT1G03040 | 67.797 | 295 | 62 | 9 | 8 | 282 | 16 | 297 | 4.53e-108 | 315 |
| MS.gene49353.t1 | AT2G24260 | 65.359 | 153 | 48 | 2 | 113 | 262 | 28 | 178 | 1.24e-62 | 198 |
| MS.gene49353.t1 | AT2G24260 | 65.359 | 153 | 48 | 2 | 113 | 262 | 131 | 281 | 1.44e-60 | 196 |
| MS.gene49353.t1 | AT5G58010 | 49.541 | 218 | 81 | 5 | 72 | 276 | 62 | 263 | 3.02e-60 | 193 |
| MS.gene49353.t1 | AT4G30980 | 57.714 | 175 | 64 | 2 | 106 | 280 | 116 | 280 | 6.46e-59 | 190 |
| MS.gene49353.t1 | AT4G30980 | 57.714 | 175 | 64 | 2 | 106 | 280 | 164 | 328 | 1.10e-58 | 191 |
| MS.gene49353.t1 | AT5G50915 | 53.333 | 90 | 37 | 2 | 112 | 200 | 128 | 213 | 2.63e-23 | 96.3 |
| MS.gene49353.t1 | AT5G50915 | 53.333 | 90 | 37 | 2 | 112 | 200 | 128 | 213 | 2.63e-23 | 96.3 |
| MS.gene49353.t1 | AT5G50915 | 53.333 | 90 | 37 | 2 | 112 | 200 | 128 | 213 | 3.06e-23 | 96.7 |
| MS.gene49353.t1 | AT5G50915 | 53.333 | 90 | 37 | 2 | 112 | 200 | 128 | 213 | 3.06e-23 | 96.7 |
| MS.gene49353.t1 | AT5G48560 | 61.333 | 75 | 28 | 1 | 111 | 184 | 292 | 366 | 3.59e-22 | 95.9 |
| MS.gene49353.t1 | AT5G48560 | 61.333 | 75 | 28 | 1 | 111 | 184 | 292 | 366 | 3.69e-22 | 96.3 |
| MS.gene49353.t1 | AT3G23690 | 45.378 | 119 | 55 | 3 | 67 | 184 | 147 | 256 | 4.68e-21 | 92.0 |
| MS.gene49353.t1 | AT1G10120 | 64.179 | 67 | 23 | 1 | 119 | 184 | 205 | 271 | 9.54e-21 | 90.9 |
| MS.gene49353.t1 | AT1G10120 | 64.179 | 67 | 23 | 1 | 119 | 184 | 205 | 271 | 9.54e-21 | 90.9 |
| MS.gene49353.t1 | AT3G07340 | 64.179 | 67 | 23 | 1 | 119 | 184 | 257 | 323 | 1.41e-20 | 91.3 |
| MS.gene49353.t1 | AT3G07340 | 65.152 | 66 | 22 | 1 | 120 | 184 | 258 | 323 | 1.50e-20 | 91.3 |
| MS.gene49353.t1 | AT4G34530 | 62.687 | 67 | 24 | 1 | 119 | 184 | 171 | 237 | 1.54e-20 | 90.1 |
| MS.gene49353.t1 | AT1G68920 | 63.636 | 66 | 23 | 1 | 120 | 184 | 302 | 367 | 2.43e-20 | 90.9 |
| MS.gene49353.t1 | AT1G68920 | 63.636 | 66 | 23 | 1 | 120 | 184 | 303 | 368 | 2.49e-20 | 90.9 |
| MS.gene49353.t1 | AT1G68920 | 63.636 | 66 | 23 | 1 | 120 | 184 | 303 | 368 | 2.49e-20 | 90.9 |
| MS.gene49353.t1 | AT1G68920 | 63.636 | 66 | 23 | 1 | 120 | 184 | 303 | 368 | 2.49e-20 | 90.9 |
| MS.gene49353.t1 | AT5G62610 | 37.594 | 133 | 67 | 3 | 111 | 227 | 144 | 276 | 4.60e-20 | 87.8 |
| MS.gene49353.t1 | AT5G62610 | 37.594 | 133 | 67 | 3 | 111 | 227 | 144 | 276 | 4.60e-20 | 87.8 |
| MS.gene49353.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 171 | 253 | 7.34e-20 | 88.2 |
| MS.gene49353.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 200 | 282 | 7.35e-20 | 88.6 |
| MS.gene49353.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 222 | 304 | 1.00e-19 | 88.6 |
| MS.gene49353.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 222 | 304 | 1.00e-19 | 88.6 |
| MS.gene49353.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 222 | 304 | 1.00e-19 | 88.6 |
| MS.gene49353.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 222 | 304 | 1.00e-19 | 88.6 |
| MS.gene49353.t1 | AT4G33880 | 51.685 | 89 | 43 | 0 | 116 | 204 | 262 | 350 | 2.29e-19 | 87.0 |
| MS.gene49353.t1 | AT2G18300 | 60.606 | 66 | 25 | 1 | 120 | 184 | 185 | 250 | 2.33e-19 | 86.7 |
| MS.gene49353.t1 | AT2G18300 | 60.606 | 66 | 25 | 1 | 120 | 184 | 185 | 250 | 2.36e-19 | 86.7 |
| MS.gene49353.t1 | AT2G18300 | 60.606 | 66 | 25 | 1 | 120 | 184 | 185 | 250 | 3.26e-19 | 86.7 |
| MS.gene49353.t1 | AT1G25330 | 52.326 | 86 | 39 | 2 | 112 | 196 | 96 | 180 | 3.59e-19 | 84.3 |
| MS.gene49353.t1 | AT1G59640 | 60.606 | 66 | 25 | 1 | 120 | 184 | 136 | 201 | 4.73e-19 | 84.7 |
| MS.gene49353.t1 | AT1G73830 | 62.121 | 66 | 24 | 1 | 120 | 184 | 147 | 212 | 4.81e-19 | 84.7 |
| MS.gene49353.t1 | AT1G73830 | 62.121 | 66 | 24 | 1 | 120 | 184 | 147 | 212 | 5.09e-19 | 84.7 |
| MS.gene49353.t1 | AT4G36540 | 59.091 | 66 | 26 | 1 | 120 | 184 | 141 | 206 | 8.68e-19 | 84.7 |
| MS.gene49353.t1 | AT4G36540 | 59.091 | 66 | 26 | 1 | 120 | 184 | 141 | 206 | 8.90e-19 | 84.7 |
| MS.gene49353.t1 | AT2G14760 | 50.575 | 87 | 43 | 0 | 116 | 202 | 233 | 319 | 1.15e-18 | 84.7 |
| MS.gene49353.t1 | AT1G59640 | 60.606 | 66 | 25 | 1 | 120 | 184 | 136 | 201 | 1.46e-18 | 84.7 |
| MS.gene49353.t1 | AT1G18400 | 56.000 | 75 | 31 | 2 | 119 | 192 | 144 | 217 | 2.16e-18 | 82.8 |
| MS.gene49353.t1 | AT1G18400 | 60.606 | 66 | 25 | 1 | 120 | 184 | 145 | 210 | 4.33e-18 | 82.0 |
| MS.gene49353.t1 | AT3G57800 | 39.416 | 137 | 58 | 3 | 120 | 231 | 204 | 340 | 4.83e-18 | 83.6 |
| MS.gene49353.t1 | AT1G27740 | 43.158 | 95 | 53 | 1 | 90 | 183 | 136 | 230 | 9.18e-18 | 81.3 |
| MS.gene49353.t1 | AT2G42300 | 43.697 | 119 | 54 | 5 | 119 | 229 | 184 | 297 | 2.11e-17 | 81.3 |
| MS.gene49353.t1 | AT4G09180 | 60.606 | 66 | 25 | 1 | 119 | 183 | 183 | 248 | 2.79e-17 | 79.7 |
| MS.gene49353.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene49353.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene49353.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene49353.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene49353.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene49353.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene49353.t1 | AT1G35460 | 60.606 | 66 | 25 | 1 | 119 | 183 | 180 | 245 | 6.12e-17 | 79.0 |
| MS.gene49353.t1 | AT2G42300 | 54.023 | 87 | 34 | 4 | 120 | 205 | 185 | 266 | 7.76e-17 | 79.0 |
| MS.gene49353.t1 | AT2G42280 | 56.522 | 69 | 29 | 1 | 119 | 186 | 278 | 346 | 8.12e-17 | 79.7 |
| MS.gene49353.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 209 | 271 | 9.78e-17 | 80.1 |
| MS.gene49353.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 209 | 271 | 9.78e-17 | 80.1 |
| MS.gene49353.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 209 | 271 | 9.78e-17 | 80.1 |
| MS.gene49353.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 280 | 342 | 1.34e-16 | 79.7 |
| MS.gene49353.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 280 | 342 | 1.34e-16 | 79.7 |
| MS.gene49353.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 280 | 342 | 1.34e-16 | 79.7 |
| MS.gene49353.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 280 | 342 | 1.34e-16 | 79.7 |
| MS.gene49353.t1 | AT2G14760 | 45.000 | 100 | 42 | 1 | 116 | 202 | 233 | 332 | 2.83e-16 | 78.2 |
| MS.gene49353.t1 | AT5G43175 | 49.275 | 69 | 35 | 0 | 115 | 183 | 127 | 195 | 2.96e-16 | 76.3 |
| MS.gene49353.t1 | AT2G42280 | 59.375 | 64 | 25 | 1 | 119 | 181 | 278 | 341 | 8.65e-16 | 77.0 |
| MS.gene49353.t1 | AT2G20180 | 51.667 | 60 | 29 | 0 | 122 | 181 | 280 | 339 | 1.30e-15 | 76.3 |
| MS.gene49353.t1 | AT1G51140 | 55.072 | 69 | 30 | 1 | 119 | 186 | 303 | 371 | 5.60e-15 | 74.7 |
| MS.gene49353.t1 | AT3G21330 | 60.714 | 56 | 22 | 0 | 127 | 182 | 276 | 331 | 1.15e-14 | 73.6 |
| MS.gene49353.t1 | AT1G66470 | 47.945 | 73 | 37 | 1 | 129 | 200 | 204 | 276 | 1.61e-14 | 72.8 |
| MS.gene49353.t1 | AT5G37800 | 47.945 | 73 | 37 | 1 | 129 | 200 | 210 | 282 | 2.47e-14 | 72.0 |
| MS.gene49353.t1 | AT4G36930 | 50.847 | 59 | 29 | 0 | 126 | 184 | 197 | 255 | 4.21e-14 | 72.0 |
| MS.gene49353.t1 | AT5G67110 | 50.847 | 59 | 28 | 1 | 131 | 188 | 98 | 156 | 1.05e-13 | 68.9 |
| MS.gene49353.t1 | AT4G28790 | 44.118 | 68 | 38 | 0 | 117 | 184 | 268 | 335 | 2.03e-13 | 70.1 |
| MS.gene49353.t1 | AT4G00050 | 45.312 | 64 | 35 | 0 | 120 | 183 | 105 | 168 | 2.45e-13 | 69.3 |
| MS.gene49353.t1 | AT4G00050 | 45.312 | 64 | 35 | 0 | 120 | 183 | 207 | 270 | 4.88e-13 | 68.9 |
| MS.gene49353.t1 | AT4G00050 | 45.312 | 64 | 35 | 0 | 120 | 183 | 207 | 270 | 5.94e-13 | 68.6 |
| MS.gene49353.t1 | AT4G28815 | 43.860 | 57 | 32 | 0 | 123 | 179 | 71 | 127 | 9.12e-13 | 66.6 |
| MS.gene49353.t1 | AT2G46970 | 39.189 | 74 | 41 | 1 | 122 | 195 | 194 | 263 | 2.14e-12 | 67.0 |
| MS.gene49353.t1 | AT2G46970 | 39.189 | 74 | 41 | 1 | 122 | 195 | 225 | 294 | 2.20e-12 | 67.0 |
| MS.gene49353.t1 | AT2G46970 | 39.189 | 74 | 41 | 1 | 122 | 195 | 203 | 272 | 2.28e-12 | 67.0 |
| MS.gene49353.t1 | AT4G28815 | 43.860 | 57 | 32 | 0 | 123 | 179 | 147 | 203 | 2.32e-12 | 66.6 |
| MS.gene49353.t1 | AT2G43140 | 36.220 | 127 | 66 | 4 | 59 | 182 | 83 | 197 | 2.52e-12 | 65.1 |
| MS.gene49353.t1 | AT2G43140 | 53.846 | 65 | 29 | 1 | 119 | 182 | 230 | 294 | 2.74e-12 | 66.2 |
| MS.gene49353.t1 | AT5G01305 | 47.541 | 61 | 32 | 0 | 119 | 179 | 36 | 96 | 3.59e-12 | 63.9 |
| MS.gene49353.t1 | AT4G28800 | 36.000 | 75 | 44 | 1 | 123 | 197 | 252 | 322 | 4.49e-12 | 66.2 |
| MS.gene49353.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 254 | 313 | 4.84e-12 | 66.2 |
| MS.gene49353.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 254 | 313 | 4.86e-12 | 66.2 |
| MS.gene49353.t1 | AT4G28790 | 43.750 | 64 | 36 | 0 | 117 | 180 | 268 | 331 | 5.33e-12 | 65.9 |
| MS.gene49353.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 261 | 320 | 5.37e-12 | 65.9 |
| MS.gene49353.t1 | AT3G59060 | 49.206 | 63 | 32 | 0 | 122 | 184 | 252 | 314 | 6.02e-12 | 65.9 |
| MS.gene49353.t1 | AT3G59060 | 49.206 | 63 | 32 | 0 | 122 | 184 | 252 | 314 | 6.02e-12 | 65.9 |
| MS.gene49353.t1 | AT3G59060 | 49.206 | 63 | 32 | 0 | 122 | 184 | 252 | 314 | 6.02e-12 | 65.9 |
| MS.gene49353.t1 | AT3G59060 | 49.206 | 63 | 32 | 0 | 122 | 184 | 252 | 314 | 6.28e-12 | 65.9 |
| MS.gene49353.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 296 | 355 | 6.70e-12 | 65.9 |
| MS.gene49353.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 254 | 313 | 7.20e-12 | 65.5 |
| MS.gene49353.t1 | AT4G00120 | 43.210 | 81 | 44 | 2 | 114 | 192 | 105 | 185 | 1.12e-11 | 63.2 |
Find 104 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGGAGTGGGAAGCGTTTC+CGG | 0.137108 | 1.1:-53221320 | MS.gene49353:CDS |
| CGGGAGTGGGAAGCGTTTCC+GGG | 0.277270 | 1.1:-53221319 | MS.gene49353:CDS |
| TCATGCACCGGTTTATCATT+TGG | 0.277273 | 1.1:-53221397 | MS.gene49353:CDS |
| CATGCACCGGTTTATCATTT+GGG | 0.298977 | 1.1:-53221396 | MS.gene49353:CDS |
| ATTACCTCGACTGACGATAA+TGG | 0.304796 | 1.1:+53218437 | None:intergenic |
| AAAGAATAGCTGAAAGAATC+AGG | 0.318251 | 1.1:-53219947 | MS.gene49353:CDS |
| TCTCACCTTGGCGCCGGAGG+TGG | 0.327568 | 1.1:-53221423 | MS.gene49353:CDS |
| AGTTTCAGGCTTAACTATAC+TGG | 0.328183 | 1.1:+53218150 | None:intergenic |
| TATGGAGGAGGAATAGTTTC+AGG | 0.332933 | 1.1:+53218136 | None:intergenic |
| TTGAAGCCTGATGAAGCTTC+CGG | 0.337349 | 1.1:-53221339 | MS.gene49353:CDS |
| TGGATTATGTCAAATTCTTA+AGG | 0.362058 | 1.1:-53219121 | MS.gene49353:CDS |
| CCTCTTCTTGCCCGCACTCT+AGG | 0.371401 | 1.1:+53220142 | None:intergenic |
| CGCACTCTAGGACGCATTGC+TGG | 0.372225 | 1.1:+53220154 | None:intergenic |
| TGAAGCCTGATGAAGCTTCC+GGG | 0.376117 | 1.1:-53221338 | MS.gene49353:CDS |
| TTACCTCGACTGACGATAAT+GGG | 0.384485 | 1.1:+53218438 | None:intergenic |
| CCACTCCCGGAAGCTTCATC+AGG | 0.392070 | 1.1:+53221333 | None:intergenic |
| AGCTCATGGAAGAAAATGTT+GGG | 0.395774 | 1.1:-53218264 | MS.gene49353:CDS |
| GATTTCCTTGAACAAATTCT+CGG | 0.419929 | 1.1:-53221522 | MS.gene49353:CDS |
| CCGTCGGCGGAGGTGAAATT+CGG | 0.429325 | 1.1:+53221495 | None:intergenic |
| TTTGGGTTTGAGCTTGGACC+AGG | 0.429629 | 1.1:-53221379 | MS.gene49353:CDS |
| TTATCATTTGGGTTTGAGCT+TGG | 0.431085 | 1.1:-53221385 | MS.gene49353:CDS |
| CAGGAAGAAGGAAGTGAGAG+TGG | 0.433710 | 1.1:-53218346 | MS.gene49353:CDS |
| CTCACCTTGGCGCCGGAGGT+GGG | 0.435501 | 1.1:-53221422 | MS.gene49353:CDS |
| GGACGCATTGCTGGTGGTTG+TGG | 0.449885 | 1.1:+53220163 | None:intergenic |
| CTCAAACCCAAATGATAAAC+CGG | 0.453773 | 1.1:+53221390 | None:intergenic |
| CGGAGGTGGGTTTCATGCAC+CGG | 0.455643 | 1.1:-53221409 | MS.gene49353:CDS |
| GAAGACCGAGAATTTGTTCA+AGG | 0.461614 | 1.1:+53221517 | None:intergenic |
| TGGGAGAAACCAACCAGCTT+GGG | 0.463571 | 1.1:-53218326 | MS.gene49353:CDS |
| GGCGACGCTGCCTCTCACCT+TGG | 0.464276 | 1.1:-53221435 | MS.gene49353:CDS |
| GACTGATCGAGCTGCCATGC+TGG | 0.479757 | 1.1:-53219153 | MS.gene49353:CDS |
| TTGAGCTTGGACCAGGGTAA+AGG | 0.479838 | 1.1:-53221372 | MS.gene49353:CDS |
| CCGGAAACGCTTCCCACTCC+CGG | 0.481302 | 1.1:+53221320 | None:intergenic |
| GCCTCTCACCTTGGCGCCGG+AGG | 0.483203 | 1.1:-53221426 | MS.gene49353:CDS |
| AAGGTGAGAGGCAGCGTCGC+CGG | 0.485809 | 1.1:+53221437 | None:intergenic |
| TCCCCACAGCATCGCTGAAA+GGG | 0.487553 | 1.1:-53220107 | MS.gene49353:intron |
| ATTCTTAAGGCTTCAAGTGA+AGG | 0.492189 | 1.1:-53219108 | MS.gene49353:intron |
| ATTGCAGATGCCAGTGAGAT+GGG | 0.492955 | 1.1:+53218199 | None:intergenic |
| TTGGACCAGGGTAAAGGAGG+AGG | 0.494681 | 1.1:-53221366 | MS.gene49353:CDS |
| CCTGATGAAGCTTCCGGGAG+TGG | 0.498744 | 1.1:-53221333 | MS.gene49353:CDS |
| AGCGTCGGTTCCGTCGGCGG+AGG | 0.501900 | 1.1:+53221485 | None:intergenic |
| CCGAATTTCACCTCCGCCGA+CGG | 0.502344 | 1.1:-53221495 | MS.gene49353:CDS |
| AGCCGGTGCAGTGGCTCCAC+TGG | 0.503330 | 1.1:-53218471 | MS.gene49353:CDS |
| ATGAGTAGATTGGGTGGAGC+CGG | 0.504884 | 1.1:-53218488 | MS.gene49353:CDS |
| GAAATCGTCGGCGGGTGTAT+CGG | 0.505672 | 1.1:+53221539 | None:intergenic |
| GGAGCAGCAGGAACTGTAGT+AGG | 0.506388 | 1.1:+53220184 | None:intergenic |
| TCACCCTTTCAGCGATGCTG+TGG | 0.507317 | 1.1:+53220104 | None:intergenic |
| CGGAGAAGCGTCGGTTCCGT+CGG | 0.507774 | 1.1:+53221479 | None:intergenic |
| GCTGGTGGTTGTGGAGCAGC+AGG | 0.508567 | 1.1:+53220172 | None:intergenic |
| AAGCTCATGGAAGAAAATGT+TGG | 0.509498 | 1.1:-53218265 | MS.gene49353:CDS |
| GTGGGAGAAACCAACCAGCT+TGG | 0.509556 | 1.1:-53218327 | MS.gene49353:CDS |
| GCTGCCTCTCACCTTGGCGC+CGG | 0.514077 | 1.1:-53221429 | MS.gene49353:CDS |
| ACCACTTCTCCCAAGCTGGT+TGG | 0.515047 | 1.1:+53218317 | None:intergenic |
| AGCAGGAACTGTAGTAGGCA+TGG | 0.515934 | 1.1:+53220189 | None:intergenic |
| AAAGCAAGTAGCTAAGCTCA+TGG | 0.516249 | 1.1:-53218278 | MS.gene49353:CDS |
| AGCAATGCGTCCTAGAGTGC+GGG | 0.522730 | 1.1:-53220152 | MS.gene49353:CDS |
| TATTGCAGATGCCAGTGAGA+TGG | 0.526193 | 1.1:+53218198 | None:intergenic |
| CACCCTTTCAGCGATGCTGT+GGG | 0.526622 | 1.1:+53220105 | None:intergenic |
| AGTTGTCCGACGGTTGCGAT+TGG | 0.526806 | 1.1:+53218173 | None:intergenic |
| ACCAACCAGCTTGGGAGAAG+TGG | 0.527139 | 1.1:-53218318 | MS.gene49353:CDS |
| GAGTTAAGCTGCAGCATCAT+CGG | 0.527777 | 1.1:+53221459 | None:intergenic |
| ATCCCCACAGCATCGCTGAA+AGG | 0.531960 | 1.1:-53220108 | MS.gene49353:CDS |
| CGGTGCATGAAACCCACCTC+CGG | 0.534315 | 1.1:+53221410 | None:intergenic |
| TTAGACCACTTCTCCCAAGC+TGG | 0.534418 | 1.1:+53218313 | None:intergenic |
| CTGCATAATGCCCATCTCAC+TGG | 0.536918 | 1.1:-53218209 | MS.gene49353:CDS |
| CTGATGAAGCTTCCGGGAGT+GGG | 0.540261 | 1.1:-53221332 | MS.gene49353:CDS |
| AGGAAGAAGGAAGTGAGAGT+GGG | 0.541139 | 1.1:-53218345 | MS.gene49353:CDS |
| GATGCAGTTTCTTCAATCAA+AGG | 0.543892 | 1.1:-53218236 | MS.gene49353:CDS |
| ACCTCCGGCGCCAAGGTGAG+AGG | 0.549716 | 1.1:+53221425 | None:intergenic |
| CGAAGGCATGTCTATGGAGG+AGG | 0.550678 | 1.1:+53218124 | None:intergenic |
| TACCAGTGGAGCCACTGCAC+CGG | 0.556175 | 1.1:+53218469 | None:intergenic |
| AGTGCGGGCAAGAAGAGGAC+AGG | 0.556988 | 1.1:-53220137 | MS.gene49353:CDS |
| AGAAGCGTCGGTTCCGTCGG+CGG | 0.557440 | 1.1:+53221482 | None:intergenic |
| GAAACCCACCTCCGGCGCCA+AGG | 0.561728 | 1.1:+53221418 | None:intergenic |
| TGGGAGAAGTGGTCTAATGA+TGG | 0.569736 | 1.1:-53218307 | MS.gene49353:CDS |
| ATTGGGTGGAGCCGGTGCAG+TGG | 0.571354 | 1.1:-53218480 | MS.gene49353:CDS |
| TGGACCAGGGTAAAGGAGGA+GGG | 0.575554 | 1.1:-53221365 | MS.gene49353:CDS |
| AGCTTGGACCAGGGTAAAGG+AGG | 0.576625 | 1.1:-53221369 | MS.gene49353:CDS |
| CCTAGAGTGCGGGCAAGAAG+AGG | 0.581308 | 1.1:-53220142 | MS.gene49353:CDS |
| GCAGGAACTGTAGTAGGCAT+GGG | 0.583605 | 1.1:+53220190 | None:intergenic |
| TGTTCAAGGAAATCGTCGGC+GGG | 0.587670 | 1.1:+53221531 | None:intergenic |
| CAGCAATGCGTCCTAGAGTG+CGG | 0.594668 | 1.1:-53220153 | MS.gene49353:CDS |
| TTGAGCATGAGTAGATTGGG+TGG | 0.604660 | 1.1:-53218494 | MS.gene49353:CDS |
| CAGCATCATCGGAGAAGCGT+CGG | 0.604818 | 1.1:+53221470 | None:intergenic |
| AAAACCCTCCTCCTTTACCC+TGG | 0.605221 | 1.1:+53221361 | None:intergenic |
| TTGTATCAACAAGATCCTCC+CGG | 0.608383 | 1.1:+53221301 | None:intergenic |
| AAGAATAGCTGAAAGAATCA+GGG | 0.613018 | 1.1:-53219946 | MS.gene49353:CDS |
| TCGTCGGCGGGTGTATCGGA+AGG | 0.615492 | 1.1:+53221543 | None:intergenic |
| TTGGGTTTGAGCTTGGACCA+GGG | 0.616126 | 1.1:-53221378 | MS.gene49353:CDS |
| TGCCATGCTGGATGAAATTG+TGG | 0.617577 | 1.1:-53219141 | MS.gene49353:CDS |
| ATCCACAATTTCATCCAGCA+TGG | 0.624370 | 1.1:+53219139 | None:intergenic |
| ACCCTTTCAGCGATGCTGTG+GGG | 0.628979 | 1.1:+53220106 | None:intergenic |
| TGTCGAAGGCATGTCTATGG+AGG | 0.632032 | 1.1:+53218121 | None:intergenic |
| ACTCTAGGACGCATTGCTGG+TGG | 0.633576 | 1.1:+53220157 | None:intergenic |
| TTGTTCAAGGAAATCGTCGG+CGG | 0.636210 | 1.1:+53221530 | None:intergenic |
| ATGATGCTGCAGCTTAACTC+CGG | 0.636220 | 1.1:-53221456 | MS.gene49353:CDS |
| ACTATACTGGAGTTGTCCGA+CGG | 0.639351 | 1.1:+53218163 | None:intergenic |
| TCATGTACCTTGTTGACACT+AGG | 0.645489 | 1.1:+53219906 | None:intergenic |
| GAGTGGGAAGCGTTTCCGGG+AGG | 0.662373 | 1.1:-53221316 | MS.gene49353:CDS |
| AATATACCAATCGCAACCGT+CGG | 0.663547 | 1.1:-53218179 | MS.gene49353:CDS |
| AATGGGATGTCAGTTACCAG+TGG | 0.664418 | 1.1:+53218455 | None:intergenic |
| ACTTGTTCCTAGTGTCAACA+AGG | 0.667852 | 1.1:-53219913 | MS.gene49353:intron |
| CATCCCATTATCGTCAGTCG+AGG | 0.668468 | 1.1:-53218441 | MS.gene49353:intron |
| GCTCATGGAAGAAAATGTTG+GGG | 0.678396 | 1.1:-53218263 | MS.gene49353:CDS |
| AATTTGTTCAAGGAAATCGT+CGG | 0.683744 | 1.1:+53221527 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATATATATTTTTTTT+GGG | - | chr1.1:53220426-53220445 | MS.gene49353:intron | 0.0% |
| !!! | AAACTAATTTTGTTTAATTT+TGG | - | chr1.1:53218503-53218522 | MS.gene49353:intron | 10.0% |
| !!! | ACGATAAATTTTATTTTTAA+GGG | + | chr1.1:53218885-53218904 | None:intergenic | 10.0% |
| !!! | TACGATAAATTTTATTTTTA+AGG | + | chr1.1:53218886-53218905 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTATTGCAATAT+AGG | - | chr1.1:53219815-53219834 | MS.gene49353:intron | 10.0% |
| !! | TGAAGTATGATTATATATTA+TGG | - | chr1.1:53219003-53219022 | MS.gene49353:intron | 15.0% |
| !! | TTAAGATATTAGAAAATACA+GGG | + | chr1.1:53219303-53219322 | None:intergenic | 15.0% |
| !!! | ACAAAATTTTATATATTGTC+TGG | + | chr1.1:53221318-53221337 | None:intergenic | 15.0% |
| !!! | ATTTGATTTCTATCTTTATT+AGG | - | chr1.1:53220636-53220655 | MS.gene49353:intron | 15.0% |
| !!! | TAATTTTGTTTAATTTTGGT+GGG | - | chr1.1:53218507-53218526 | MS.gene49353:intron | 15.0% |
| !!! | TATAAAATTTTGTATTGTTC+AGG | - | chr1.1:53221325-53221344 | MS.gene49353:CDS | 15.0% |
| !!! | TTATGTTAAGTTACATTTTT+AGG | + | chr1.1:53218417-53218436 | None:intergenic | 15.0% |
| !!! | TTTAAGATATTAGAAAATAC+AGG | + | chr1.1:53219304-53219323 | None:intergenic | 15.0% |
| !!! | TTTGTAATCATTATTTTGTT+GGG | - | chr1.1:53220740-53220759 | MS.gene49353:intron | 15.0% |
| !! | AATAAAATCAAATGGCTAAT+GGG | + | chr1.1:53220811-53220830 | None:intergenic | 20.0% |
| !! | AATTGTATCTTAATATTCAC+CGG | + | chr1.1:53220842-53220861 | None:intergenic | 20.0% |
| !! | ACTTTATATATCATTAAGAC+AGG | + | chr1.1:53219457-53219476 | None:intergenic | 20.0% |
| !! | CTTTATTAGGTCTATAATTA+AGG | - | chr1.1:53220649-53220668 | MS.gene49353:intron | 20.0% |
| !! | GTATGATTATATATTATGGA+AGG | - | chr1.1:53219007-53219026 | MS.gene49353:intron | 20.0% |
| !! | TAACATAATGCAAATAAGTT+AGG | + | chr1.1:53219220-53219239 | None:intergenic | 20.0% |
| !! | TAAGATATTAGAAAATACAG+GGG | + | chr1.1:53219302-53219321 | None:intergenic | 20.0% |
| !!! | AACTGATTTTGGTATTAAAT+TGG | + | chr1.1:53220194-53220213 | None:intergenic | 20.0% |
| !!! | ATGTTTATTACAATTAGTCT+GGG | - | chr1.1:53220294-53220313 | MS.gene49353:intron | 20.0% |
| !!! | ATTGGTATTTTATGTAATCT+TGG | - | chr1.1:53220025-53220044 | MS.gene49353:intron | 20.0% |
| !!! | CTAATTTTGTTTAATTTTGG+TGG | - | chr1.1:53218506-53218525 | MS.gene49353:intron | 20.0% |
| !!! | CTTTGTAATCATTATTTTGT+TGG | - | chr1.1:53220739-53220758 | MS.gene49353:intron | 20.0% |
| !!! | TATATATTTTTTTTGGGACT+TGG | - | chr1.1:53220432-53220451 | MS.gene49353:intron | 20.0% |
| !!! | TTTTCTGCTATATTTACATT+CGG | + | chr1.1:53219099-53219118 | None:intergenic | 20.0% |
| !!! | TTTTGTTGAAAACTAGATAT+TGG | + | chr1.1:53220999-53221018 | None:intergenic | 20.0% |
| ! | AAATTTACATTTCTGCCTTT+GGG | - | chr1.1:53219392-53219411 | MS.gene49353:intron | 25.0% |
| ! | AAGGCAGAAATGTAAATTTA+AGG | + | chr1.1:53219391-53219410 | None:intergenic | 25.0% |
| ! | AATACTGAATACATAGTACT+TGG | - | chr1.1:53219323-53219342 | MS.gene49353:intron | 25.0% |
| ! | AATTATTCAAATCATGTCGT+TGG | - | chr1.1:53221273-53221292 | MS.gene49353:intron | 25.0% |
| ! | ACAGTGTATTACTATTTATC+TGG | - | chr1.1:53218575-53218594 | MS.gene49353:intron | 25.0% |
| ! | ATCATCTGTTTAAGCTAAAT+TGG | - | chr1.1:53218534-53218553 | MS.gene49353:intron | 25.0% |
| ! | ATGGAAATATTATACAGAAG+AGG | + | chr1.1:53220484-53220503 | None:intergenic | 25.0% |
| ! | ATTATATATTATGGAAGGTG+TGG | - | chr1.1:53219012-53219031 | MS.gene49353:intron | 25.0% |
| ! | CAGTGTATTACTATTTATCT+GGG | - | chr1.1:53218576-53218595 | MS.gene49353:intron | 25.0% |
| ! | CATGTTTATTACAATTAGTC+TGG | - | chr1.1:53220293-53220312 | MS.gene49353:intron | 25.0% |
| ! | CATTGAAAATTAGACCTATT+TGG | + | chr1.1:53220962-53220981 | None:intergenic | 25.0% |
| ! | CGAATGATTAACATTTAATG+AGG | - | chr1.1:53219632-53219651 | MS.gene49353:intron | 25.0% |
| ! | GAAAACATTTCAGACTTTAA+TGG | - | chr1.1:53218714-53218733 | MS.gene49353:intron | 25.0% |
| ! | GAATAAAATCAAATGGCTAA+TGG | + | chr1.1:53220812-53220831 | None:intergenic | 25.0% |
| ! | GTTGCTGACAAATTTAAATT+TGG | + | chr1.1:53221118-53221137 | None:intergenic | 25.0% |
| ! | TAAATTTACATTTCTGCCTT+TGG | - | chr1.1:53219391-53219410 | MS.gene49353:intron | 25.0% |
| ! | TAAGATATGGAGACAAAATT+TGG | - | chr1.1:53219913-53219932 | MS.gene49353:intron | 25.0% |
| ! | TACTTCATTCATCTTTAAGT+TGG | + | chr1.1:53218990-53219009 | None:intergenic | 25.0% |
| ! | TCATCGTGAATAAAATCAAA+TGG | + | chr1.1:53220819-53220838 | None:intergenic | 25.0% |
| ! | TGGATTATGTCAAATTCTTA+AGG | - | chr1.1:53220569-53220588 | MS.gene49353:intron | 25.0% |
| !! | TCATCTTTTAACCTTTTGAT+AGG | + | chr1.1:53220327-53220346 | None:intergenic | 25.0% |
| !! | TTATATATTATGGAAGGTGT+GGG | - | chr1.1:53219013-53219032 | MS.gene49353:intron | 25.0% |
| !!! | AATATAGCAGAAAAAGTACT+TGG | - | chr1.1:53219105-53219124 | MS.gene49353:intron | 25.0% |
| !!! | ACACAATCTAAAACTGATTT+TGG | + | chr1.1:53220205-53220224 | None:intergenic | 25.0% |
| !!! | ATACACAGTTTTAGATACAA+TGG | + | chr1.1:53220503-53220522 | None:intergenic | 25.0% |
| !!! | GAATTGTTATTGGTTTTTGT+GGG | - | chr1.1:53218910-53218929 | MS.gene49353:intron | 25.0% |
| !!! | TGAATTGTTATTGGTTTTTG+TGG | - | chr1.1:53218909-53218928 | MS.gene49353:intron | 25.0% |
| AAACTAGCAGTAAGTAAGAA+TGG | - | chr1.1:53218744-53218763 | MS.gene49353:intron | 30.0% | |
| AAACTAGCAGTAAGTAAGAA+TGG | + | chr1.1:53218763-53218744 | None:intergenic | 30.0% | |
| AAAGAATAGCTGAAAGAATC+AGG | - | chr1.1:53219743-53219762 | MS.gene49353:intron | 30.0% | |
| AAATCACATTGCTAATTCCT+TGG | - | chr1.1:53219658-53219677 | MS.gene49353:intron | 30.0% | |
| AAATTTCATGTTCGCCAAAT+CGG | + | chr1.1:53220372-53220391 | None:intergenic | 30.0% | |
| AAGAATAGCTGAAAGAATCA+GGG | - | chr1.1:53219744-53219763 | MS.gene49353:intron | 30.0% | |
| AATAATATCCAACTATCCGA+AGG | - | chr1.1:53220907-53220926 | MS.gene49353:intron | 30.0% | |
| AATTAAATCATCCTTCGAGT+GGG | + | chr1.1:53220126-53220145 | None:intergenic | 30.0% | |
| ATAATATCCAACTATCCGAA+GGG | - | chr1.1:53220908-53220927 | MS.gene49353:intron | 30.0% | |
| ATCGTAGCATGAATTGTTAT+TGG | - | chr1.1:53218900-53218919 | MS.gene49353:intron | 30.0% | |
| CTGATACTTTATCTCAGAAA+TGG | - | chr1.1:53218780-53218799 | MS.gene49353:intron | 30.0% | |
| GAAATCAAATGTGAAATCCA+TGG | + | chr1.1:53220626-53220645 | None:intergenic | 30.0% | |
| GATTTCCTTGAACAAATTCT+CGG | - | chr1.1:53218168-53218187 | MS.gene49353:CDS | 30.0% | |
| GGAAACATTTCAGACTTTAA+TGG | + | chr1.1:53219199-53219218 | None:intergenic | 30.0% | |
| GGTGAAGTAACAAGTTATTT+GGG | - | chr1.1:53218824-53218843 | MS.gene49353:intron | 30.0% | |
| TAATGATTACAAAGAGTGAG+AGG | + | chr1.1:53220733-53220752 | None:intergenic | 30.0% | |
| TCAATTGTCTTTCACCAAAT+AGG | - | chr1.1:53220945-53220964 | MS.gene49353:intron | 30.0% | |
| TCGGATAGTTGGATATTATT+GGG | + | chr1.1:53220907-53220926 | None:intergenic | 30.0% | |
| TGGTGAAGTAACAAGTTATT+TGG | - | chr1.1:53218823-53218842 | MS.gene49353:intron | 30.0% | |
| TGTTTAAGCTAAATTGGACT+TGG | - | chr1.1:53218540-53218559 | MS.gene49353:intron | 30.0% | |
| TTCGGATAGTTGGATATTAT+TGG | + | chr1.1:53220908-53220927 | None:intergenic | 30.0% | |
| ! | AACAAAAACAGTGCTGAAAT+TGG | - | chr1.1:53219960-53219979 | MS.gene49353:CDS | 30.0% |
| ! | AAGTTTTTGCAGACTTTTCA+TGG | - | chr1.1:53219473-53219492 | MS.gene49353:intron | 30.0% |
| ! | AATTTGTTCAAGGAAATCGT+CGG | + | chr1.1:53218166-53218185 | None:intergenic | 30.0% |
| ! | AGTTTTTGCAGACTTTTCAT+GGG | - | chr1.1:53219474-53219493 | MS.gene49353:intron | 30.0% |
| ! | TGTTCTTTTGTCTATCTTTC+AGG | - | chr1.1:53221171-53221190 | MS.gene49353:intron | 30.0% |
| ! | TTGATTTTATTCACGATGAC+CGG | - | chr1.1:53220820-53220839 | MS.gene49353:intron | 30.0% |
| ! | TTGTGTTTGAGTTTGGAAAA+TGG | - | chr1.1:53220154-53220173 | MS.gene49353:CDS | 30.0% |
| ! | TTTTGTATTGTTCAGGAAGA+AGG | - | chr1.1:53221332-53221351 | MS.gene49353:CDS | 30.0% |
| !! | TAATTAAGGTTAGCTTGAAC+TGG | - | chr1.1:53220663-53220682 | MS.gene49353:intron | 30.0% |
| !! | TTATTTTGTTGGGATTCAAC+TGG | - | chr1.1:53220750-53220769 | MS.gene49353:intron | 30.0% |
| !! | TTCTGAAGTATAAAGTCTTC+TGG | - | chr1.1:53220398-53220417 | MS.gene49353:intron | 30.0% |
| !!! | TTTCAGCACTGTTTTTGTTT+CGG | + | chr1.1:53219959-53219978 | None:intergenic | 30.0% |
| AAAAATTATGCCAGCTCAGT+TGG | - | chr1.1:53218663-53218682 | MS.gene49353:intron | 35.0% | |
| AAGCTCATGGAAGAAAATGT+TGG | - | chr1.1:53221425-53221444 | MS.gene49353:CDS | 35.0% | |
| ACTTCAGAGTAAACACGAAA+AGG | + | chr1.1:53219889-53219908 | None:intergenic | 35.0% | |
| AGCTCATGGAAGAAAATGTT+GGG | - | chr1.1:53221426-53221445 | MS.gene49353:CDS | 35.0% | |
| AGTATTGTTCAATGCGTACT+TGG | - | chr1.1:53220050-53220069 | MS.gene49353:intron | 35.0% | |
| AGTTTCAGGCTTAACTATAC+TGG | + | chr1.1:53221543-53221562 | None:intergenic | 35.0% | |
| ATTCTTAAGGCTTCAAGTGA+AGG | - | chr1.1:53220582-53220601 | MS.gene49353:intron | 35.0% | |
| CATTAGCATTAAGCATACCA+AGG | + | chr1.1:53219678-53219697 | None:intergenic | 35.0% | |
| CTCAAACCCAAATGATAAAC+CGG | + | chr1.1:53218303-53218322 | None:intergenic | 35.0% | |
| CTTCAGAGTAAACACGAAAA+GGG | + | chr1.1:53219888-53219907 | None:intergenic | 35.0% | |
| GAATTAAATCATCCTTCGAG+TGG | + | chr1.1:53220127-53220146 | None:intergenic | 35.0% | |
| GATAGTTGGATATTATTGGG+TGG | + | chr1.1:53220904-53220923 | None:intergenic | 35.0% | |
| GATGCAGTTTCTTCAATCAA+AGG | - | chr1.1:53221454-53221473 | MS.gene49353:CDS | 35.0% | |
| TAAAGATCATACACCAAGTC+AGG | + | chr1.1:53218954-53218973 | None:intergenic | 35.0% | |
| TACTGTTGGCAATGTCTAAA+TGG | + | chr1.1:53219264-53219283 | None:intergenic | 35.0% | |
| TCTAAATGGCTATTCTCAGT+TGG | + | chr1.1:53219250-53219269 | None:intergenic | 35.0% | |
| TGATTTCTCTAGACACATGT+GGG | - | chr1.1:53221035-53221054 | MS.gene49353:intron | 35.0% | |
| TGGGAAACAATCCTATCAAA+AGG | - | chr1.1:53220313-53220332 | MS.gene49353:intron | 35.0% | |
| TGGTTAAAGTAGCAACAACA+TGG | + | chr1.1:53220884-53220903 | None:intergenic | 35.0% | |
| TGTACATGAAAGTGAAAGCA+AGG | - | chr1.1:53221079-53221098 | MS.gene49353:intron | 35.0% | |
| TTACTATTTATCTGGGTCTC+AGG | - | chr1.1:53218583-53218602 | MS.gene49353:intron | 35.0% | |
| ! | ACCTCTCATGTTCTGTTTTA+CGG | - | chr1.1:53220260-53220279 | MS.gene49353:intron | 35.0% |
| ! | TAACTCGTTGTGTTTGAGTT+TGG | - | chr1.1:53220147-53220166 | MS.gene49353:CDS | 35.0% |
| ! | TTATCATTTGGGTTTGAGCT+TGG | - | chr1.1:53218305-53218324 | MS.gene49353:CDS | 35.0% |
| !! | AGCTAAATTGGACTTGGTTT+TGG | - | chr1.1:53218546-53218565 | MS.gene49353:intron | 35.0% |
| !! | CTCTGAAGTGAGATAAGATA+TGG | - | chr1.1:53219900-53219919 | MS.gene49353:intron | 35.0% |
| !! | GTCAAAAGGCATTGGTAAAT+AGG | + | chr1.1:53220711-53220730 | None:intergenic | 35.0% |
| !! | GTTTTGAGCATGAGTAGATT+GGG | - | chr1.1:53221193-53221212 | MS.gene49353:intron | 35.0% |
| !!! | TTCAGCACTGTTTTTGTTTC+GGG | + | chr1.1:53219958-53219977 | None:intergenic | 35.0% |
| !!! | TTGTTATTGGTTTTTGTGGG+TGG | - | chr1.1:53218913-53218932 | MS.gene49353:intron | 35.0% |
| !!! | TTTTTTTTGGGACTTGGTTG+TGG | - | chr1.1:53220438-53220457 | MS.gene49353:intron | 35.0% |
| AAAGCAAGTAGCTAAGCTCA+TGG | - | chr1.1:53221412-53221431 | MS.gene49353:CDS | 40.0% | |
| AATACCAATGCCTAGCAACA+AGG | + | chr1.1:53220014-53220033 | None:intergenic | 40.0% | |
| AATATACCAATCGCAACCGT+CGG | - | chr1.1:53221511-53221530 | MS.gene49353:CDS | 40.0% | |
| ACAAAGAGTGAGAGGTCAAA+AGG | + | chr1.1:53220725-53220744 | None:intergenic | 40.0% | |
| ACCGTAAAACAGAACATGAG+AGG | + | chr1.1:53220264-53220283 | None:intergenic | 40.0% | |
| ACTTGTTCCTAGTGTCAACA+AGG | - | chr1.1:53219777-53219796 | MS.gene49353:intron | 40.0% | |
| AGACAGGAAAAAATGCTCCT+TGG | + | chr1.1:53219441-53219460 | None:intergenic | 40.0% | |
| ATCCACAATTTCATCCAGCA+TGG | + | chr1.1:53220554-53220573 | None:intergenic | 40.0% | |
| ATTACCTCGACTGACGATAA+TGG | + | chr1.1:53221256-53221275 | None:intergenic | 40.0% | |
| CATGTGTCTAGAGAAATCAC+TGG | + | chr1.1:53221034-53221053 | None:intergenic | 40.0% | |
| CATTCTTCAATTCAGCTGCT+TGG | - | chr1.1:53218803-53218822 | MS.gene49353:intron | 40.0% | |
| CTAAATTAGCCCACCCAAAT+TGG | + | chr1.1:53218626-53218645 | None:intergenic | 40.0% | |
| GCTCATGGAAGAAAATGTTG+GGG | - | chr1.1:53221427-53221446 | MS.gene49353:CDS | 40.0% | |
| GTGATTTCTCTAGACACATG+TGG | - | chr1.1:53221034-53221053 | MS.gene49353:intron | 40.0% | |
| TAGACATTGCCAACAGTACT+TGG | - | chr1.1:53219266-53219285 | MS.gene49353:intron | 40.0% | |
| TATGGAGGAGGAATAGTTTC+AGG | + | chr1.1:53221557-53221576 | None:intergenic | 40.0% | |
| TCATGTACCTTGTTGACACT+AGG | + | chr1.1:53219787-53219806 | None:intergenic | 40.0% | |
| TCTATAGAACTTGCGCAATC+AGG | - | chr1.1:53219853-53219872 | MS.gene49353:intron | 40.0% | |
| TCTGCATATAGTCTCCGATT+TGG | - | chr1.1:53220355-53220374 | MS.gene49353:intron | 40.0% | |
| TTACCTCGACTGACGATAAT+GGG | + | chr1.1:53221255-53221274 | None:intergenic | 40.0% | |
| TTGTATCAACAAGATCCTCC+CGG | + | chr1.1:53218392-53218411 | None:intergenic | 40.0% | |
| TTTACATTTCTGCCTTTGGG+AGG | - | chr1.1:53219395-53219414 | MS.gene49353:intron | 40.0% | |
| ! | AAAACGACTCCAAGTACTGT+TGG | + | chr1.1:53219278-53219297 | None:intergenic | 40.0% |
| ! | ACATGAGAGGTATGCTTATC+TGG | + | chr1.1:53220251-53220270 | None:intergenic | 40.0% |
| ! | CTATAGTTCTACACAGACAC+TGG | - | chr1.1:53220088-53220107 | MS.gene49353:intron | 40.0% |
| ! | GAAGACCGAGAATTTGTTCA+AGG | + | chr1.1:53218176-53218195 | None:intergenic | 40.0% |
| ! | TATTATGGAAGGTGTGGGAT+TGG | - | chr1.1:53219018-53219037 | MS.gene49353:intron | 40.0% |
| ! | TGCTGAAATTGGAGCTTTGT+GGG | - | chr1.1:53219971-53219990 | MS.gene49353:intron | 40.0% |
| ! | TTACATTTCTGCCTTTGGGA+GGG | - | chr1.1:53219396-53219415 | MS.gene49353:intron | 40.0% |
| ! | TTTTCCTTGTTGCTAGGCAT+TGG | - | chr1.1:53220007-53220026 | MS.gene49353:intron | 40.0% |
| ! | TTTTTGTGGGTGGTTCATTC+TGG | - | chr1.1:53218923-53218942 | MS.gene49353:intron | 40.0% |
| !! | CATGCACCGGTTTATCATTT+GGG | - | chr1.1:53218294-53218313 | MS.gene49353:CDS | 40.0% |
| !! | GACTGATTTTCCTTGTTGCT+AGG | - | chr1.1:53220001-53220020 | MS.gene49353:intron | 40.0% |
| !! | TCATGCACCGGTTTATCATT+TGG | - | chr1.1:53218293-53218312 | MS.gene49353:CDS | 40.0% |
| !!! | GGTTTTGAGCATGAGTAGAT+TGG | - | chr1.1:53221192-53221211 | MS.gene49353:intron | 40.0% |
| !!! | TCTGCGCAACTGTTTTTGAA+CGG | + | chr1.1:53219722-53219741 | None:intergenic | 40.0% |
| AATGGGATGTCAGTTACCAG+TGG | + | chr1.1:53221238-53221257 | None:intergenic | 45.0% | |
| ACTATACTGGAGTTGTCCGA+CGG | + | chr1.1:53221530-53221549 | None:intergenic | 45.0% | |
| AGAACTTGCGCAATCAGGTA+AGG | - | chr1.1:53219858-53219877 | MS.gene49353:intron | 45.0% | |
| AGGAAGAAGGAAGTGAGAGT+GGG | - | chr1.1:53221345-53221364 | MS.gene49353:CDS | 45.0% | |
| AGGGTCATGCTATGACAAGT+TGG | + | chr1.1:53218866-53218885 | None:intergenic | 45.0% | |
| ATGATGCTGCAGCTTAACTC+CGG | - | chr1.1:53218234-53218253 | MS.gene49353:CDS | 45.0% | |
| ATTGCAGATGCCAGTGAGAT+GGG | + | chr1.1:53221494-53221513 | None:intergenic | 45.0% | |
| GAGTTAAGCTGCAGCATCAT+CGG | + | chr1.1:53218234-53218253 | None:intergenic | 45.0% | |
| GTGAAAGCAAGGCTCTTCAT+TGG | - | chr1.1:53221090-53221109 | MS.gene49353:intron | 45.0% | |
| GTGCTGAAATTGGAGCTTTG+TGG | - | chr1.1:53219970-53219989 | MS.gene49353:intron | 45.0% | |
| GTGGTCTGCTGTATTTCTCT+TGG | - | chr1.1:53220457-53220476 | MS.gene49353:intron | 45.0% | |
| TAAGCTACTACCAACTGAGC+TGG | + | chr1.1:53218676-53218695 | None:intergenic | 45.0% | |
| TATTGCAGATGCCAGTGAGA+TGG | + | chr1.1:53221495-53221514 | None:intergenic | 45.0% | |
| TGCCATGCTGGATGAAATTG+TGG | - | chr1.1:53220549-53220568 | MS.gene49353:intron | 45.0% | |
| TGGGAGAAGTGGTCTAATGA+TGG | - | chr1.1:53221383-53221402 | MS.gene49353:CDS | 45.0% | |
| TTGAAGCCTGATGAAGCTTC+CGG | - | chr1.1:53218351-53218370 | MS.gene49353:intron | 45.0% | |
| TTGAGCATGAGTAGATTGGG+TGG | - | chr1.1:53221196-53221215 | MS.gene49353:intron | 45.0% | |
| TTGTTCAAGGAAATCGTCGG+CGG | + | chr1.1:53218163-53218182 | None:intergenic | 45.0% | |
| ! | AGTGAGAGGTCAAAAGGCAT+TGG | + | chr1.1:53220719-53220738 | None:intergenic | 45.0% |
| ! | GCTGAAATTGGAGCTTTGTG+GGG | - | chr1.1:53219972-53219991 | MS.gene49353:intron | 45.0% |
| ! | TAATGGGTCCCATACCAAAG+TGG | + | chr1.1:53220795-53220814 | None:intergenic | 45.0% |
| ! | TAGTGCTTTTGTGAGCTCCA+TGG | - | chr1.1:53220606-53220625 | MS.gene49353:intron | 45.0% |
| ! | TGAGAGGTATGCTTATCTGG+AGG | + | chr1.1:53220248-53220267 | None:intergenic | 45.0% |
| !! | ATTCTCCTCGGTGCCAATTT+GGG | - | chr1.1:53218610-53218629 | MS.gene49353:intron | 45.0% |
| !! | CTGAGATGCCACTTTGGTAT+GGG | - | chr1.1:53220784-53220803 | MS.gene49353:intron | 45.0% |
| !!! | CAAAATATATATATTTTTTT+TGG | - | chr1.1:53220425-53220444 | MS.gene49353:intron | 5.0% |
| AAAACCCTCCTCCTTTACCC+TGG | + | chr1.1:53218332-53218351 | None:intergenic | 50.0% | |
| AGCAGGAACTGTAGTAGGCA+TGG | + | chr1.1:53219504-53219523 | None:intergenic | 50.0% | |
| AGTCCACAGTTGAAGCCCTT+CGG | + | chr1.1:53220926-53220945 | None:intergenic | 50.0% | |
| ATGAGTAGATTGGGTGGAGC+CGG | - | chr1.1:53221202-53221221 | MS.gene49353:intron | 50.0% | |
| CAGGAAGAAGGAAGTGAGAG+TGG | - | chr1.1:53221344-53221363 | MS.gene49353:CDS | 50.0% | |
| CATCCCATTATCGTCAGTCG+AGG | - | chr1.1:53221249-53221268 | MS.gene49353:intron | 50.0% | |
| CATGTCTGTTTCCCACTCGA+AGG | - | chr1.1:53220112-53220131 | MS.gene49353:CDS | 50.0% | |
| CATTCTGGTAGCACCTGACT+TGG | - | chr1.1:53218938-53218957 | MS.gene49353:intron | 50.0% | |
| CCATACCAAAGTGGCATCTC+AGG | + | chr1.1:53220786-53220805 | None:intergenic | 50.0% | |
| CTGCATAATGCCCATCTCAC+TGG | - | chr1.1:53221481-53221500 | MS.gene49353:CDS | 50.0% | |
| CTTGCGCAATCAGGTAAGGA+TGG | - | chr1.1:53219862-53219881 | MS.gene49353:intron | 50.0% | |
| GCAGGAACTGTAGTAGGCAT+GGG | + | chr1.1:53219503-53219522 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCCT+CGG | - | chr1.1:53218598-53218617 | MS.gene49353:intron | 50.0% | |
| GTTGAAGCCCTTCGGATAGT+TGG | + | chr1.1:53220918-53220937 | None:intergenic | 50.0% | |
| TATCCGAAGGGCTTCAACTG+TGG | - | chr1.1:53220920-53220939 | MS.gene49353:intron | 50.0% | |
| TGAAGCCTGATGAAGCTTCC+GGG | - | chr1.1:53218352-53218371 | MS.gene49353:intron | 50.0% | |
| TGGGAGAAACCAACCAGCTT+GGG | - | chr1.1:53221364-53221383 | MS.gene49353:CDS | 50.0% | |
| TGTTCAAGGAAATCGTCGGC+GGG | + | chr1.1:53218162-53218181 | None:intergenic | 50.0% | |
| TTAGACCACTTCTCCCAAGC+TGG | + | chr1.1:53221380-53221399 | None:intergenic | 50.0% | |
| TTGAGCTTGGACCAGGGTAA+AGG | - | chr1.1:53218318-53218337 | MS.gene49353:CDS | 50.0% | |
| TTGGGTTTGAGCTTGGACCA+GGG | - | chr1.1:53218312-53218331 | MS.gene49353:CDS | 50.0% | |
| ! | TTTGGGTTTGAGCTTGGACC+AGG | - | chr1.1:53218311-53218330 | MS.gene49353:CDS | 50.0% |
| !! | AGGGACTGGAGAAGTGTTGT+TGG | - | chr1.1:53219415-53219434 | MS.gene49353:intron | 50.0% |
| !! | CCTGAGATGCCACTTTGGTA+TGG | - | chr1.1:53220783-53220802 | MS.gene49353:intron | 50.0% |
| !! | GATTCTCCTCGGTGCCAATT+TGG | - | chr1.1:53218609-53218628 | MS.gene49353:intron | 50.0% |
| !! | TGGAGAAGTGTTGTTGGCCA+AGG | - | chr1.1:53219421-53219440 | MS.gene49353:intron | 50.0% |
| ACCAACCAGCTTGGGAGAAG+TGG | - | chr1.1:53221372-53221391 | MS.gene49353:CDS | 55.0% | |
| ACCACTTCTCCCAAGCTGGT+TGG | + | chr1.1:53221376-53221395 | None:intergenic | 55.0% | |
| ACCCTTTCAGCGATGCTGTG+GGG | + | chr1.1:53219587-53219606 | None:intergenic | 55.0% | |
| ACTTCTCCAGTCCCTCCCAA+AGG | + | chr1.1:53219410-53219429 | None:intergenic | 55.0% | |
| AGCAATGCGTCCTAGAGTGC+GGG | - | chr1.1:53219538-53219557 | MS.gene49353:intron | 55.0% | |
| AGCTTGGACCAGGGTAAAGG+AGG | - | chr1.1:53218321-53218340 | MS.gene49353:CDS | 55.0% | |
| AGTTGTCCGACGGTTGCGAT+TGG | + | chr1.1:53221520-53221539 | None:intergenic | 55.0% | |
| ATCCCCACAGCATCGCTGAA+AGG | - | chr1.1:53219582-53219601 | MS.gene49353:intron | 55.0% | |
| CACCCTTTCAGCGATGCTGT+GGG | + | chr1.1:53219588-53219607 | None:intergenic | 55.0% | |
| CAGCAATGCGTCCTAGAGTG+CGG | - | chr1.1:53219537-53219556 | MS.gene49353:intron | 55.0% | |
| CTGATGAAGCTTCCGGGAGT+GGG | - | chr1.1:53218358-53218377 | MS.gene49353:intron | 55.0% | |
| GAAATCGTCGGCGGGTGTAT+CGG | + | chr1.1:53218154-53218173 | None:intergenic | 55.0% | |
| GGAGCAGCAGGAACTGTAGT+AGG | + | chr1.1:53219509-53219528 | None:intergenic | 55.0% | |
| GTGGGAGAAACCAACCAGCT+TGG | - | chr1.1:53221363-53221382 | MS.gene49353:CDS | 55.0% | |
| TCACCCTTTCAGCGATGCTG+TGG | + | chr1.1:53219589-53219608 | None:intergenic | 55.0% | |
| TCCCCACAGCATCGCTGAAA+GGG | - | chr1.1:53219583-53219602 | MS.gene49353:intron | 55.0% | |
| TGGACCAGGGTAAAGGAGGA+GGG | - | chr1.1:53218325-53218344 | MS.gene49353:CDS | 55.0% | |
| TTGGACCAGGGTAAAGGAGG+AGG | - | chr1.1:53218324-53218343 | MS.gene49353:CDS | 55.0% | |
| ! | ATGGAAGGTGTGGGATTGGC+TGG | - | chr1.1:53219022-53219041 | MS.gene49353:intron | 55.0% |
| ! | CAGCATCATCGGAGAAGCGT+CGG | + | chr1.1:53218223-53218242 | None:intergenic | 55.0% |
| ! | GCGAACCTGAGATGCCACTT+TGG | - | chr1.1:53220778-53220797 | MS.gene49353:intron | 55.0% |
| ! | TTTCTGCCTTTGGGAGGGAC+TGG | - | chr1.1:53219401-53219420 | MS.gene49353:intron | 55.0% |
| !! | ACTCTAGGACGCATTGCTGG+TGG | + | chr1.1:53219536-53219555 | None:intergenic | 55.0% |
| !! | TCCTCGGTGCCAATTTGGGT+GGG | - | chr1.1:53218614-53218633 | MS.gene49353:intron | 55.0% |
| AGTGCGGGCAAGAAGAGGAC+AGG | - | chr1.1:53219553-53219572 | MS.gene49353:intron | 60.0% | |
| CCACTCCCGGAAGCTTCATC+AGG | + | chr1.1:53218360-53218379 | None:intergenic | 60.0% | |
| CCGAATTTCACCTCCGCCGA+CGG | - | chr1.1:53218195-53218214 | MS.gene49353:CDS | 60.0% | |
| CCGTCGGCGGAGGTGAAATT+CGG | + | chr1.1:53218198-53218217 | None:intergenic | 60.0% | |
| CCTAGAGTGCGGGCAAGAAG+AGG | - | chr1.1:53219548-53219567 | MS.gene49353:intron | 60.0% | |
| CCTCTTCTTGCCCGCACTCT+AGG | + | chr1.1:53219551-53219570 | None:intergenic | 60.0% | |
| CCTGATGAAGCTTCCGGGAG+TGG | - | chr1.1:53218357-53218376 | MS.gene49353:intron | 60.0% | |
| CGGTGCATGAAACCCACCTC+CGG | + | chr1.1:53218283-53218302 | None:intergenic | 60.0% | |
| GACTGATCGAGCTGCCATGC+TGG | - | chr1.1:53220537-53220556 | MS.gene49353:intron | 60.0% | |
| GGACGCATTGCTGGTGGTTG+TGG | + | chr1.1:53219530-53219549 | None:intergenic | 60.0% | |
| TACCAGTGGAGCCACTGCAC+CGG | + | chr1.1:53221224-53221243 | None:intergenic | 60.0% | |
| ! | CGGAGGTGGGTTTCATGCAC+CGG | - | chr1.1:53218281-53218300 | MS.gene49353:CDS | 60.0% |
| !! | CGCACTCTAGGACGCATTGC+TGG | + | chr1.1:53219539-53219558 | None:intergenic | 60.0% |
| !! | CTCCTCGGTGCCAATTTGGG+TGG | - | chr1.1:53218613-53218632 | MS.gene49353:intron | 60.0% |
| AAGGTGAGAGGCAGCGTCGC+CGG | + | chr1.1:53218256-53218275 | None:intergenic | 65.0% | |
| ATTGGGTGGAGCCGGTGCAG+TGG | - | chr1.1:53221210-53221229 | MS.gene49353:intron | 65.0% | |
| CCGGAAACGCTTCCCACTCC+CGG | + | chr1.1:53218373-53218392 | None:intergenic | 65.0% | |
| GCCCACCCAAATTGGCACCG+AGG | + | chr1.1:53218618-53218637 | None:intergenic | 65.0% | |
| GCTGGTGGTTGTGGAGCAGC+AGG | + | chr1.1:53219521-53219540 | None:intergenic | 65.0% | |
| TCGTCGGCGGGTGTATCGGA+AGG | + | chr1.1:53218150-53218169 | None:intergenic | 65.0% | |
| !! | AGAAGCGTCGGTTCCGTCGG+CGG | + | chr1.1:53218211-53218230 | None:intergenic | 65.0% |
| !! | CCGGGAGTGGGAAGCGTTTC+CGG | - | chr1.1:53218370-53218389 | MS.gene49353:intron | 65.0% |
| !! | CGGAGAAGCGTCGGTTCCGT+CGG | + | chr1.1:53218214-53218233 | None:intergenic | 65.0% |
| !! | CGGGAGTGGGAAGCGTTTCC+GGG | - | chr1.1:53218371-53218390 | MS.gene49353:intron | 65.0% |
| !! | GAGTGGGAAGCGTTTCCGGG+AGG | - | chr1.1:53218374-53218393 | MS.gene49353:intron | 65.0% |
| ACCTCCGGCGCCAAGGTGAG+AGG | + | chr1.1:53218268-53218287 | None:intergenic | 70.0% | |
| AGCCGGTGCAGTGGCTCCAC+TGG | - | chr1.1:53221219-53221238 | MS.gene49353:intron | 70.0% | |
| GAAACCCACCTCCGGCGCCA+AGG | + | chr1.1:53218275-53218294 | None:intergenic | 70.0% | |
| GCTGCCTCTCACCTTGGCGC+CGG | - | chr1.1:53218261-53218280 | MS.gene49353:CDS | 70.0% | |
| GGCGACGCTGCCTCTCACCT+TGG | - | chr1.1:53218255-53218274 | MS.gene49353:CDS | 70.0% | |
| ! | CTCACCTTGGCGCCGGAGGT+GGG | - | chr1.1:53218268-53218287 | MS.gene49353:CDS | 70.0% |
| ! | TCTCACCTTGGCGCCGGAGG+TGG | - | chr1.1:53218267-53218286 | MS.gene49353:CDS | 70.0% |
| ! | GCCTCTCACCTTGGCGCCGG+AGG | - | chr1.1:53218264-53218283 | MS.gene49353:CDS | 75.0% |
| !! | AGCGTCGGTTCCGTCGGCGG+AGG | + | chr1.1:53218208-53218227 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 53218135 | 53221577 | 53218135 | ID=MS.gene49353 |
| chr1.1 | mRNA | 53218135 | 53221577 | 53218135 | ID=MS.gene49353.t1;Parent=MS.gene49353 |
| chr1.1 | exon | 53221290 | 53221577 | 53221290 | ID=MS.gene49353.t1.exon1;Parent=MS.gene49353.t1 |
| chr1.1 | CDS | 53221290 | 53221577 | 53221290 | ID=cds.MS.gene49353.t1;Parent=MS.gene49353.t1 |
| chr1.1 | exon | 53220108 | 53220227 | 53220108 | ID=MS.gene49353.t1.exon2;Parent=MS.gene49353.t1 |
| chr1.1 | CDS | 53220108 | 53220227 | 53220108 | ID=cds.MS.gene49353.t1;Parent=MS.gene49353.t1 |
| chr1.1 | exon | 53219914 | 53219979 | 53219914 | ID=MS.gene49353.t1.exon3;Parent=MS.gene49353.t1 |
| chr1.1 | CDS | 53219914 | 53219979 | 53219914 | ID=cds.MS.gene49353.t1;Parent=MS.gene49353.t1 |
| chr1.1 | exon | 53219109 | 53219174 | 53219109 | ID=MS.gene49353.t1.exon4;Parent=MS.gene49353.t1 |
| chr1.1 | CDS | 53219109 | 53219174 | 53219109 | ID=cds.MS.gene49353.t1;Parent=MS.gene49353.t1 |
| chr1.1 | exon | 53218442 | 53218519 | 53218442 | ID=MS.gene49353.t1.exon5;Parent=MS.gene49353.t1 |
| chr1.1 | CDS | 53218442 | 53218519 | 53218442 | ID=cds.MS.gene49353.t1;Parent=MS.gene49353.t1 |
| chr1.1 | exon | 53218135 | 53218365 | 53218135 | ID=MS.gene49353.t1.exon6;Parent=MS.gene49353.t1 |
| chr1.1 | CDS | 53218135 | 53218365 | 53218135 | ID=cds.MS.gene49353.t1;Parent=MS.gene49353.t1 |
| Gene Sequence |
| Protein sequence |
