Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50572.t1 | XP_003590536.1 | 99.6 | 282 | 1 | 0 | 1 | 282 | 1 | 282 | 1.20E-151 | 545.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50572.t1 | O22768 | 70.7 | 307 | 63 | 7 | 2 | 281 | 3 | 309 | 1.2e-104 | 380.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50572.t1 | G7ICM9 | 99.6 | 282 | 1 | 0 | 1 | 282 | 1 | 282 | 8.4e-152 | 545.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene50572.t1 | TF | bHLH |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012581 | MS.gene50572 | PPI |
| MS.gene50572 | MS.gene036160 | PPI |
| MS.gene50572 | MS.gene042288 | PPI |
| MS.gene50572 | MS.gene49353 | PPI |
| MS.gene50572 | MS.gene035577 | PPI |
| MS.gene50572 | MS.gene39915 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50572.t1 | MTR_1g070870 | 99.645 | 282 | 1 | 0 | 1 | 282 | 1 | 282 | 0.0 | 576 |
| MS.gene50572.t1 | MTR_1g070870 | 98.596 | 285 | 1 | 1 | 1 | 282 | 1 | 285 | 0.0 | 570 |
| MS.gene50572.t1 | MTR_1g080890 | 80.571 | 175 | 34 | 0 | 104 | 278 | 177 | 351 | 3.84e-97 | 290 |
| MS.gene50572.t1 | MTR_4g131160 | 65.854 | 164 | 46 | 3 | 108 | 262 | 184 | 346 | 1.90e-63 | 204 |
| MS.gene50572.t1 | MTR_4g131160 | 65.854 | 164 | 46 | 3 | 108 | 262 | 187 | 349 | 2.12e-63 | 204 |
| MS.gene50572.t1 | MTR_1g017350 | 51.579 | 95 | 45 | 1 | 91 | 184 | 231 | 325 | 1.29e-22 | 96.7 |
| MS.gene50572.t1 | MTR_1g017350 | 51.579 | 95 | 45 | 1 | 91 | 184 | 231 | 325 | 1.39e-22 | 96.7 |
| MS.gene50572.t1 | MTR_1g017350 | 51.579 | 95 | 45 | 1 | 91 | 184 | 231 | 325 | 1.72e-22 | 96.7 |
| MS.gene50572.t1 | MTR_1g017350 | 51.579 | 95 | 45 | 1 | 91 | 184 | 231 | 325 | 1.83e-22 | 96.3 |
| MS.gene50572.t1 | MTR_7g053410 | 60.000 | 75 | 29 | 1 | 111 | 184 | 308 | 382 | 5.71e-22 | 95.5 |
| MS.gene50572.t1 | MTR_7g053410 | 60.000 | 75 | 29 | 1 | 111 | 184 | 308 | 382 | 5.88e-22 | 95.5 |
| MS.gene50572.t1 | MTR_8g012290 | 60.000 | 75 | 29 | 1 | 111 | 184 | 282 | 356 | 9.70e-22 | 94.7 |
| MS.gene50572.t1 | MTR_3g498825 | 48.980 | 98 | 49 | 1 | 112 | 208 | 139 | 236 | 9.86e-22 | 93.2 |
| MS.gene50572.t1 | MTR_8g012290 | 60.000 | 75 | 29 | 1 | 111 | 184 | 282 | 356 | 1.01e-21 | 94.7 |
| MS.gene50572.t1 | MTR_3g116770 | 65.152 | 66 | 22 | 1 | 120 | 184 | 191 | 256 | 6.28e-21 | 91.7 |
| MS.gene50572.t1 | MTR_3g116770 | 65.152 | 66 | 22 | 1 | 120 | 184 | 191 | 256 | 6.46e-21 | 91.7 |
| MS.gene50572.t1 | MTR_8g065740 | 63.636 | 66 | 23 | 1 | 120 | 184 | 305 | 370 | 3.87e-20 | 90.1 |
| MS.gene50572.t1 | MTR_4g070320 | 63.636 | 66 | 23 | 1 | 120 | 184 | 143 | 208 | 4.60e-20 | 89.0 |
| MS.gene50572.t1 | MTR_5g037250 | 56.000 | 75 | 32 | 1 | 111 | 184 | 103 | 177 | 7.36e-20 | 86.3 |
| MS.gene50572.t1 | MTR_5g048860 | 62.687 | 67 | 24 | 1 | 119 | 184 | 364 | 430 | 8.83e-20 | 89.4 |
| MS.gene50572.t1 | MTR_8g062240 | 60.606 | 66 | 25 | 1 | 120 | 184 | 151 | 216 | 1.87e-19 | 86.3 |
| MS.gene50572.t1 | MTR_8g099880 | 50.588 | 85 | 37 | 2 | 119 | 202 | 144 | 224 | 2.16e-19 | 86.7 |
| MS.gene50572.t1 | MTR_4g033295 | 61.538 | 65 | 24 | 1 | 119 | 182 | 117 | 181 | 1.51e-18 | 81.6 |
| MS.gene50572.t1 | MTR_4g033295 | 62.121 | 66 | 24 | 1 | 119 | 183 | 117 | 182 | 2.57e-18 | 81.3 |
| MS.gene50572.t1 | MTR_1g084980 | 50.000 | 74 | 33 | 1 | 122 | 195 | 464 | 533 | 9.47e-18 | 83.6 |
| MS.gene50572.t1 | MTR_1g072530 | 33.571 | 140 | 81 | 1 | 126 | 265 | 190 | 317 | 9.67e-18 | 82.0 |
| MS.gene50572.t1 | MTR_1g018090 | 58.462 | 65 | 27 | 0 | 119 | 183 | 273 | 337 | 1.59e-17 | 82.0 |
| MS.gene50572.t1 | MTR_1g052470 | 54.667 | 75 | 33 | 1 | 113 | 186 | 291 | 365 | 2.04e-17 | 81.6 |
| MS.gene50572.t1 | MTR_3g103030 | 48.780 | 82 | 42 | 0 | 119 | 200 | 228 | 309 | 3.39e-17 | 80.5 |
| MS.gene50572.t1 | MTR_1g059270 | 48.864 | 88 | 39 | 3 | 119 | 205 | 159 | 241 | 3.71e-17 | 79.3 |
| MS.gene50572.t1 | MTR_1g059270 | 48.864 | 88 | 39 | 3 | 119 | 205 | 159 | 241 | 4.25e-17 | 80.1 |
| MS.gene50572.t1 | MTR_1g069155 | 50.000 | 72 | 32 | 1 | 122 | 193 | 319 | 386 | 5.12e-17 | 81.3 |
| MS.gene50572.t1 | MTR_7g099540 | 50.000 | 72 | 32 | 1 | 122 | 193 | 254 | 321 | 5.31e-17 | 80.9 |
| MS.gene50572.t1 | MTR_5g005110 | 56.923 | 65 | 28 | 0 | 119 | 183 | 223 | 287 | 7.11e-17 | 79.7 |
| MS.gene50572.t1 | MTR_1g019240 | 42.697 | 89 | 44 | 2 | 100 | 188 | 71 | 152 | 8.82e-17 | 78.6 |
| MS.gene50572.t1 | MTR_7g092510 | 56.716 | 67 | 28 | 1 | 119 | 184 | 172 | 238 | 4.57e-16 | 77.4 |
| MS.gene50572.t1 | MTR_7g110810 | 53.571 | 56 | 26 | 0 | 131 | 186 | 213 | 268 | 5.16e-16 | 77.4 |
| MS.gene50572.t1 | MTR_1g106470 | 51.316 | 76 | 37 | 0 | 108 | 183 | 184 | 259 | 5.91e-16 | 76.6 |
| MS.gene50572.t1 | MTR_7g099540 | 45.070 | 71 | 39 | 0 | 122 | 192 | 254 | 324 | 8.64e-16 | 77.4 |
| MS.gene50572.t1 | MTR_2g098310 | 56.061 | 66 | 28 | 1 | 119 | 183 | 331 | 396 | 9.30e-16 | 77.0 |
| MS.gene50572.t1 | MTR_3g101810 | 48.750 | 80 | 40 | 1 | 113 | 192 | 164 | 242 | 1.72e-15 | 75.1 |
| MS.gene50572.t1 | MTR_7g111320 | 47.368 | 76 | 37 | 1 | 122 | 197 | 434 | 506 | 1.86e-15 | 76.6 |
| MS.gene50572.t1 | MTR_8g036235 | 52.174 | 69 | 32 | 1 | 119 | 186 | 315 | 383 | 2.10e-15 | 75.9 |
| MS.gene50572.t1 | MTR_7g092540 | 47.561 | 82 | 33 | 2 | 103 | 183 | 235 | 307 | 2.26e-15 | 75.1 |
| MS.gene50572.t1 | MTR_7g092540 | 45.882 | 85 | 36 | 2 | 103 | 186 | 235 | 310 | 2.78e-15 | 75.1 |
| MS.gene50572.t1 | MTR_3g449770 | 49.206 | 63 | 32 | 0 | 122 | 184 | 311 | 373 | 2.93e-15 | 75.9 |
| MS.gene50572.t1 | MTR_4g065870 | 53.623 | 69 | 31 | 1 | 119 | 186 | 354 | 422 | 3.08e-15 | 75.5 |
| MS.gene50572.t1 | MTR_5g079500 | 41.304 | 92 | 50 | 2 | 93 | 183 | 193 | 281 | 3.93e-15 | 74.3 |
| MS.gene50572.t1 | MTR_2g098310 | 55.385 | 65 | 28 | 1 | 119 | 182 | 331 | 395 | 7.41e-15 | 74.3 |
| MS.gene50572.t1 | MTR_1g106460 | 47.059 | 68 | 36 | 0 | 116 | 183 | 234 | 301 | 8.26e-15 | 73.6 |
| MS.gene50572.t1 | MTR_5g017040 | 41.304 | 92 | 46 | 2 | 131 | 217 | 116 | 204 | 1.64e-14 | 73.2 |
| MS.gene50572.t1 | MTR_8g093500 | 49.333 | 75 | 38 | 0 | 108 | 182 | 102 | 176 | 2.00e-14 | 72.0 |
| MS.gene50572.t1 | MTR_1g072530 | 33.333 | 126 | 72 | 1 | 126 | 251 | 190 | 303 | 2.90e-14 | 72.0 |
| MS.gene50572.t1 | MTR_6g084120 | 57.627 | 59 | 24 | 1 | 120 | 177 | 155 | 213 | 3.25e-14 | 71.2 |
| MS.gene50572.t1 | MTR_3g028520 | 53.030 | 66 | 30 | 1 | 119 | 183 | 321 | 386 | 9.17e-14 | 71.2 |
| MS.gene50572.t1 | MTR_3g027650 | 53.030 | 66 | 30 | 1 | 119 | 183 | 321 | 386 | 9.17e-14 | 71.2 |
| MS.gene50572.t1 | MTR_4g065870 | 53.968 | 63 | 28 | 1 | 119 | 180 | 354 | 416 | 1.04e-13 | 70.9 |
| MS.gene50572.t1 | MTR_3g027650 | 54.688 | 64 | 28 | 1 | 119 | 181 | 321 | 384 | 4.19e-13 | 69.3 |
| MS.gene50572.t1 | MTR_1g106480 | 50.000 | 66 | 33 | 0 | 119 | 184 | 68 | 133 | 5.48e-13 | 65.9 |
| MS.gene50572.t1 | MTR_7g069590 | 47.170 | 53 | 28 | 0 | 127 | 179 | 33 | 85 | 6.90e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50572.t1 | AT4G02590 | 70.358 | 307 | 64 | 7 | 2 | 281 | 3 | 309 | 8.94e-130 | 371 |
| MS.gene50572.t1 | AT4G02590 | 70.358 | 307 | 64 | 7 | 2 | 281 | 3 | 309 | 8.94e-130 | 371 |
| MS.gene50572.t1 | AT4G02590 | 78.723 | 235 | 44 | 4 | 53 | 281 | 12 | 246 | 1.92e-115 | 332 |
| MS.gene50572.t1 | AT1G03040 | 68.919 | 296 | 62 | 8 | 8 | 282 | 16 | 302 | 1.55e-112 | 327 |
| MS.gene50572.t1 | AT1G03040 | 63.240 | 321 | 69 | 7 | 8 | 282 | 16 | 333 | 3.63e-108 | 317 |
| MS.gene50572.t1 | AT1G03040 | 67.797 | 295 | 62 | 9 | 8 | 282 | 16 | 297 | 4.53e-108 | 315 |
| MS.gene50572.t1 | AT2G24260 | 65.359 | 153 | 48 | 2 | 113 | 262 | 28 | 178 | 1.24e-62 | 198 |
| MS.gene50572.t1 | AT2G24260 | 65.359 | 153 | 48 | 2 | 113 | 262 | 131 | 281 | 1.44e-60 | 196 |
| MS.gene50572.t1 | AT5G58010 | 49.541 | 218 | 81 | 5 | 72 | 276 | 62 | 263 | 3.02e-60 | 193 |
| MS.gene50572.t1 | AT4G30980 | 57.714 | 175 | 64 | 2 | 106 | 280 | 116 | 280 | 6.46e-59 | 190 |
| MS.gene50572.t1 | AT4G30980 | 57.714 | 175 | 64 | 2 | 106 | 280 | 164 | 328 | 1.10e-58 | 191 |
| MS.gene50572.t1 | AT5G50915 | 53.333 | 90 | 37 | 2 | 112 | 200 | 128 | 213 | 2.63e-23 | 96.3 |
| MS.gene50572.t1 | AT5G50915 | 53.333 | 90 | 37 | 2 | 112 | 200 | 128 | 213 | 2.63e-23 | 96.3 |
| MS.gene50572.t1 | AT5G50915 | 53.333 | 90 | 37 | 2 | 112 | 200 | 128 | 213 | 3.06e-23 | 96.7 |
| MS.gene50572.t1 | AT5G50915 | 53.333 | 90 | 37 | 2 | 112 | 200 | 128 | 213 | 3.06e-23 | 96.7 |
| MS.gene50572.t1 | AT5G48560 | 61.333 | 75 | 28 | 1 | 111 | 184 | 292 | 366 | 3.59e-22 | 95.9 |
| MS.gene50572.t1 | AT5G48560 | 61.333 | 75 | 28 | 1 | 111 | 184 | 292 | 366 | 3.69e-22 | 96.3 |
| MS.gene50572.t1 | AT3G23690 | 45.378 | 119 | 55 | 3 | 67 | 184 | 147 | 256 | 4.68e-21 | 92.0 |
| MS.gene50572.t1 | AT1G10120 | 64.179 | 67 | 23 | 1 | 119 | 184 | 205 | 271 | 9.54e-21 | 90.9 |
| MS.gene50572.t1 | AT1G10120 | 64.179 | 67 | 23 | 1 | 119 | 184 | 205 | 271 | 9.54e-21 | 90.9 |
| MS.gene50572.t1 | AT3G07340 | 64.179 | 67 | 23 | 1 | 119 | 184 | 257 | 323 | 1.41e-20 | 91.3 |
| MS.gene50572.t1 | AT3G07340 | 65.152 | 66 | 22 | 1 | 120 | 184 | 258 | 323 | 1.50e-20 | 91.3 |
| MS.gene50572.t1 | AT4G34530 | 62.687 | 67 | 24 | 1 | 119 | 184 | 171 | 237 | 1.54e-20 | 90.1 |
| MS.gene50572.t1 | AT1G68920 | 63.636 | 66 | 23 | 1 | 120 | 184 | 302 | 367 | 2.43e-20 | 90.9 |
| MS.gene50572.t1 | AT1G68920 | 63.636 | 66 | 23 | 1 | 120 | 184 | 303 | 368 | 2.49e-20 | 90.9 |
| MS.gene50572.t1 | AT1G68920 | 63.636 | 66 | 23 | 1 | 120 | 184 | 303 | 368 | 2.49e-20 | 90.9 |
| MS.gene50572.t1 | AT1G68920 | 63.636 | 66 | 23 | 1 | 120 | 184 | 303 | 368 | 2.49e-20 | 90.9 |
| MS.gene50572.t1 | AT5G62610 | 37.594 | 133 | 67 | 3 | 111 | 227 | 144 | 276 | 4.60e-20 | 87.8 |
| MS.gene50572.t1 | AT5G62610 | 37.594 | 133 | 67 | 3 | 111 | 227 | 144 | 276 | 4.60e-20 | 87.8 |
| MS.gene50572.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 171 | 253 | 7.34e-20 | 88.2 |
| MS.gene50572.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 200 | 282 | 7.35e-20 | 88.6 |
| MS.gene50572.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 222 | 304 | 1.00e-19 | 88.6 |
| MS.gene50572.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 222 | 304 | 1.00e-19 | 88.6 |
| MS.gene50572.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 222 | 304 | 1.00e-19 | 88.6 |
| MS.gene50572.t1 | AT1G26260 | 52.273 | 88 | 36 | 3 | 119 | 205 | 222 | 304 | 1.00e-19 | 88.6 |
| MS.gene50572.t1 | AT4G33880 | 51.685 | 89 | 43 | 0 | 116 | 204 | 262 | 350 | 2.29e-19 | 87.0 |
| MS.gene50572.t1 | AT2G18300 | 60.606 | 66 | 25 | 1 | 120 | 184 | 185 | 250 | 2.33e-19 | 86.7 |
| MS.gene50572.t1 | AT2G18300 | 60.606 | 66 | 25 | 1 | 120 | 184 | 185 | 250 | 2.36e-19 | 86.7 |
| MS.gene50572.t1 | AT2G18300 | 60.606 | 66 | 25 | 1 | 120 | 184 | 185 | 250 | 3.26e-19 | 86.7 |
| MS.gene50572.t1 | AT1G25330 | 52.326 | 86 | 39 | 2 | 112 | 196 | 96 | 180 | 3.59e-19 | 84.3 |
| MS.gene50572.t1 | AT1G59640 | 60.606 | 66 | 25 | 1 | 120 | 184 | 136 | 201 | 4.73e-19 | 84.7 |
| MS.gene50572.t1 | AT1G73830 | 62.121 | 66 | 24 | 1 | 120 | 184 | 147 | 212 | 4.81e-19 | 84.7 |
| MS.gene50572.t1 | AT1G73830 | 62.121 | 66 | 24 | 1 | 120 | 184 | 147 | 212 | 5.09e-19 | 84.7 |
| MS.gene50572.t1 | AT4G36540 | 59.091 | 66 | 26 | 1 | 120 | 184 | 141 | 206 | 8.68e-19 | 84.7 |
| MS.gene50572.t1 | AT4G36540 | 59.091 | 66 | 26 | 1 | 120 | 184 | 141 | 206 | 8.90e-19 | 84.7 |
| MS.gene50572.t1 | AT2G14760 | 50.575 | 87 | 43 | 0 | 116 | 202 | 233 | 319 | 1.15e-18 | 84.7 |
| MS.gene50572.t1 | AT1G59640 | 60.606 | 66 | 25 | 1 | 120 | 184 | 136 | 201 | 1.46e-18 | 84.7 |
| MS.gene50572.t1 | AT1G18400 | 56.000 | 75 | 31 | 2 | 119 | 192 | 144 | 217 | 2.16e-18 | 82.8 |
| MS.gene50572.t1 | AT1G18400 | 60.606 | 66 | 25 | 1 | 120 | 184 | 145 | 210 | 4.33e-18 | 82.0 |
| MS.gene50572.t1 | AT3G57800 | 39.416 | 137 | 58 | 3 | 120 | 231 | 204 | 340 | 4.83e-18 | 83.6 |
| MS.gene50572.t1 | AT1G27740 | 43.158 | 95 | 53 | 1 | 90 | 183 | 136 | 230 | 9.18e-18 | 81.3 |
| MS.gene50572.t1 | AT2G42300 | 43.697 | 119 | 54 | 5 | 119 | 229 | 184 | 297 | 2.11e-17 | 81.3 |
| MS.gene50572.t1 | AT4G09180 | 60.606 | 66 | 25 | 1 | 119 | 183 | 183 | 248 | 2.79e-17 | 79.7 |
| MS.gene50572.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene50572.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene50572.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene50572.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene50572.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene50572.t1 | AT1G09530 | 50.000 | 64 | 32 | 0 | 122 | 185 | 339 | 402 | 4.15e-17 | 81.3 |
| MS.gene50572.t1 | AT1G35460 | 60.606 | 66 | 25 | 1 | 119 | 183 | 180 | 245 | 6.12e-17 | 79.0 |
| MS.gene50572.t1 | AT2G42300 | 54.023 | 87 | 34 | 4 | 120 | 205 | 185 | 266 | 7.76e-17 | 79.0 |
| MS.gene50572.t1 | AT2G42280 | 56.522 | 69 | 29 | 1 | 119 | 186 | 278 | 346 | 8.12e-17 | 79.7 |
| MS.gene50572.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 209 | 271 | 9.78e-17 | 80.1 |
| MS.gene50572.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 209 | 271 | 9.78e-17 | 80.1 |
| MS.gene50572.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 209 | 271 | 9.78e-17 | 80.1 |
| MS.gene50572.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 280 | 342 | 1.34e-16 | 79.7 |
| MS.gene50572.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 280 | 342 | 1.34e-16 | 79.7 |
| MS.gene50572.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 280 | 342 | 1.34e-16 | 79.7 |
| MS.gene50572.t1 | AT2G20180 | 50.794 | 63 | 31 | 0 | 122 | 184 | 280 | 342 | 1.34e-16 | 79.7 |
| MS.gene50572.t1 | AT2G14760 | 45.000 | 100 | 42 | 1 | 116 | 202 | 233 | 332 | 2.83e-16 | 78.2 |
| MS.gene50572.t1 | AT5G43175 | 49.275 | 69 | 35 | 0 | 115 | 183 | 127 | 195 | 2.96e-16 | 76.3 |
| MS.gene50572.t1 | AT2G42280 | 59.375 | 64 | 25 | 1 | 119 | 181 | 278 | 341 | 8.65e-16 | 77.0 |
| MS.gene50572.t1 | AT2G20180 | 51.667 | 60 | 29 | 0 | 122 | 181 | 280 | 339 | 1.30e-15 | 76.3 |
| MS.gene50572.t1 | AT1G51140 | 55.072 | 69 | 30 | 1 | 119 | 186 | 303 | 371 | 5.60e-15 | 74.7 |
| MS.gene50572.t1 | AT3G21330 | 60.714 | 56 | 22 | 0 | 127 | 182 | 276 | 331 | 1.15e-14 | 73.6 |
| MS.gene50572.t1 | AT1G66470 | 47.945 | 73 | 37 | 1 | 129 | 200 | 204 | 276 | 1.61e-14 | 72.8 |
| MS.gene50572.t1 | AT5G37800 | 47.945 | 73 | 37 | 1 | 129 | 200 | 210 | 282 | 2.47e-14 | 72.0 |
| MS.gene50572.t1 | AT4G36930 | 50.847 | 59 | 29 | 0 | 126 | 184 | 197 | 255 | 4.21e-14 | 72.0 |
| MS.gene50572.t1 | AT5G67110 | 50.847 | 59 | 28 | 1 | 131 | 188 | 98 | 156 | 1.05e-13 | 68.9 |
| MS.gene50572.t1 | AT4G28790 | 44.118 | 68 | 38 | 0 | 117 | 184 | 268 | 335 | 2.03e-13 | 70.1 |
| MS.gene50572.t1 | AT4G00050 | 45.312 | 64 | 35 | 0 | 120 | 183 | 105 | 168 | 2.45e-13 | 69.3 |
| MS.gene50572.t1 | AT4G00050 | 45.312 | 64 | 35 | 0 | 120 | 183 | 207 | 270 | 4.88e-13 | 68.9 |
| MS.gene50572.t1 | AT4G00050 | 45.312 | 64 | 35 | 0 | 120 | 183 | 207 | 270 | 5.94e-13 | 68.6 |
| MS.gene50572.t1 | AT4G28815 | 43.860 | 57 | 32 | 0 | 123 | 179 | 71 | 127 | 9.12e-13 | 66.6 |
| MS.gene50572.t1 | AT2G46970 | 39.189 | 74 | 41 | 1 | 122 | 195 | 194 | 263 | 2.14e-12 | 67.0 |
| MS.gene50572.t1 | AT2G46970 | 39.189 | 74 | 41 | 1 | 122 | 195 | 225 | 294 | 2.20e-12 | 67.0 |
| MS.gene50572.t1 | AT2G46970 | 39.189 | 74 | 41 | 1 | 122 | 195 | 203 | 272 | 2.28e-12 | 67.0 |
| MS.gene50572.t1 | AT4G28815 | 43.860 | 57 | 32 | 0 | 123 | 179 | 147 | 203 | 2.32e-12 | 66.6 |
| MS.gene50572.t1 | AT2G43140 | 36.220 | 127 | 66 | 4 | 59 | 182 | 83 | 197 | 2.52e-12 | 65.1 |
| MS.gene50572.t1 | AT2G43140 | 53.846 | 65 | 29 | 1 | 119 | 182 | 230 | 294 | 2.74e-12 | 66.2 |
| MS.gene50572.t1 | AT5G01305 | 47.541 | 61 | 32 | 0 | 119 | 179 | 36 | 96 | 3.59e-12 | 63.9 |
| MS.gene50572.t1 | AT4G28800 | 36.000 | 75 | 44 | 1 | 123 | 197 | 252 | 322 | 4.49e-12 | 66.2 |
| MS.gene50572.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 254 | 313 | 4.84e-12 | 66.2 |
| MS.gene50572.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 254 | 313 | 4.86e-12 | 66.2 |
| MS.gene50572.t1 | AT4G28790 | 43.750 | 64 | 36 | 0 | 117 | 180 | 268 | 331 | 5.33e-12 | 65.9 |
| MS.gene50572.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 261 | 320 | 5.37e-12 | 65.9 |
| MS.gene50572.t1 | AT3G59060 | 49.206 | 63 | 32 | 0 | 122 | 184 | 252 | 314 | 6.02e-12 | 65.9 |
| MS.gene50572.t1 | AT3G59060 | 49.206 | 63 | 32 | 0 | 122 | 184 | 252 | 314 | 6.02e-12 | 65.9 |
| MS.gene50572.t1 | AT3G59060 | 49.206 | 63 | 32 | 0 | 122 | 184 | 252 | 314 | 6.02e-12 | 65.9 |
| MS.gene50572.t1 | AT3G59060 | 49.206 | 63 | 32 | 0 | 122 | 184 | 252 | 314 | 6.28e-12 | 65.9 |
| MS.gene50572.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 296 | 355 | 6.70e-12 | 65.9 |
| MS.gene50572.t1 | AT2G43010 | 53.333 | 60 | 28 | 0 | 123 | 182 | 254 | 313 | 7.20e-12 | 65.5 |
| MS.gene50572.t1 | AT4G00120 | 43.210 | 81 | 44 | 2 | 114 | 192 | 105 | 185 | 1.12e-11 | 63.2 |
Find 105 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGGGAGTGGGAAGCGTTTC+CGG | 0.137108 | 1.2:-54227262 | MS.gene50572:CDS |
| CATGCACCGGTTTATCATTT+GGG | 0.231247 | 1.2:-54227338 | MS.gene50572:CDS |
| TTATGTTAAGTTACATTCTT+AGG | 0.274593 | 1.2:+54227218 | None:intergenic |
| CGGGAGTGGGAAGCGTTTCC+GGG | 0.277270 | 1.2:-54227261 | MS.gene50572:CDS |
| TCATGCACCGGTTTATCATT+TGG | 0.277273 | 1.2:-54227339 | MS.gene50572:CDS |
| ATTACCTCGACTGACGATAA+TGG | 0.304796 | 1.2:+54224369 | None:intergenic |
| AAAGAATAGCTGAAAGAATC+AGG | 0.318251 | 1.2:-54225889 | MS.gene50572:CDS |
| AGTTTCAGGCTTAACTATAC+TGG | 0.328183 | 1.2:+54224079 | None:intergenic |
| TATGGAGGAGGAATAGTTTC+AGG | 0.332933 | 1.2:+54224065 | None:intergenic |
| TTGAAGCCTGATGAAGCTTC+CGG | 0.337349 | 1.2:-54227281 | MS.gene50572:CDS |
| TCTCACCTTGGCGCTGGAGG+AGG | 0.354681 | 1.2:-54227365 | MS.gene50572:CDS |
| TGGATTATGTCAAATTCTTA+AGG | 0.362058 | 1.2:-54225053 | MS.gene50572:CDS |
| CCTCTTCTTGCCCGCACTCT+AGG | 0.371401 | 1.2:+54226084 | None:intergenic |
| CGCACTCTAGGACGCATTGC+TGG | 0.372225 | 1.2:+54226096 | None:intergenic |
| TGAAGCCTGATGAAGCTTCC+GGG | 0.376117 | 1.2:-54227280 | MS.gene50572:CDS |
| TTACCTCGACTGACGATAAT+GGG | 0.384485 | 1.2:+54224370 | None:intergenic |
| CCACTCCCGGAAGCTTCATC+AGG | 0.392070 | 1.2:+54227275 | None:intergenic |
| AGCTCATGGAAGAAAATGTT+GGG | 0.395774 | 1.2:-54224193 | MS.gene50572:CDS |
| GATTTCCTTGAACAAATTCT+CGG | 0.419929 | 1.2:-54227464 | MS.gene50572:CDS |
| GCTGCCTCTCACCTTGGCGC+TGG | 0.427725 | 1.2:-54227371 | MS.gene50572:CDS |
| CCGTCGGCGGAGGTGAAATT+CGG | 0.429325 | 1.2:+54227437 | None:intergenic |
| TTATCATTTGGGGTTGAGCT+TGG | 0.431085 | 1.2:-54227327 | MS.gene50572:CDS |
| CAGGAAGAAGGAAGTGAGAG+TGG | 0.433710 | 1.2:-54224275 | MS.gene50572:CDS |
| GCCTCTCACCTTGGCGCTGG+AGG | 0.436271 | 1.2:-54227368 | MS.gene50572:CDS |
| TTTGGGGTTGAGCTTGGACC+AGG | 0.438558 | 1.2:-54227321 | MS.gene50572:CDS |
| CTCACCTTGGCGCTGGAGGA+GGG | 0.440875 | 1.2:-54227364 | MS.gene50572:CDS |
| GGACGCATTGCTGGTGGTTG+TGG | 0.449885 | 1.2:+54226105 | None:intergenic |
| CTCAACCCCAAATGATAAAC+CGG | 0.453773 | 1.2:+54227332 | None:intergenic |
| GAAGACCGAGAATTTGTTCA+AGG | 0.461614 | 1.2:+54227459 | None:intergenic |
| TGGGAGAAACCAACCAGCTT+GGG | 0.463571 | 1.2:-54224255 | MS.gene50572:CDS |
| GGCGACGCTGCCTCTCACCT+TGG | 0.464276 | 1.2:-54227377 | MS.gene50572:CDS |
| TTGAGCTTGGACCAGGGTAA+AGG | 0.474258 | 1.2:-54227314 | MS.gene50572:CDS |
| GACTGATCGAGCTGCCATGC+TGG | 0.479757 | 1.2:-54225085 | MS.gene50572:CDS |
| TGGAGGAGGGTTTCATGCAC+CGG | 0.480121 | 1.2:-54227351 | MS.gene50572:CDS |
| CCGGAAACGCTTCCCACTCC+CGG | 0.481302 | 1.2:+54227262 | None:intergenic |
| AAGGTGAGAGGCAGCGTCGC+CGG | 0.485809 | 1.2:+54227379 | None:intergenic |
| TCCCCACAGCATCGCTGAAA+GGG | 0.487553 | 1.2:-54226049 | MS.gene50572:intron |
| ATTCTTAAGGCTTCAAGTGA+AGG | 0.492189 | 1.2:-54225040 | MS.gene50572:intron |
| ATTGCAGATGCCAGTGAGAT+GGG | 0.492955 | 1.2:+54224128 | None:intergenic |
| TTGGACCAGGGTAAAGGCGG+AGG | 0.497852 | 1.2:-54227308 | MS.gene50572:CDS |
| CCTGATGAAGCTTCCGGGAG+TGG | 0.498744 | 1.2:-54227275 | MS.gene50572:CDS |
| ATGCACCGGTTTATCATTTG+GGG | 0.499545 | 1.2:-54227337 | MS.gene50572:CDS |
| AGCGTCGGTTCCGTCGGCGG+AGG | 0.501900 | 1.2:+54227427 | None:intergenic |
| CCGAATTTCACCTCCGCCGA+CGG | 0.502344 | 1.2:-54227437 | MS.gene50572:CDS |
| AGCCGGTGCAGTGGCTCCAC+TGG | 0.503330 | 1.2:-54224403 | MS.gene50572:CDS |
| ATGAGTAGATTGGGTGGAGC+CGG | 0.504884 | 1.2:-54224420 | MS.gene50572:CDS |
| GAAATCGTCGGCGGGTGTAT+CGG | 0.505672 | 1.2:+54227481 | None:intergenic |
| GGAGCAGCAGGAACTGTAGT+AGG | 0.506388 | 1.2:+54226126 | None:intergenic |
| TCACCCTTTCAGCGATGCTG+TGG | 0.507317 | 1.2:+54226046 | None:intergenic |
| CGGAGAAGCGTCGGTTCCGT+CGG | 0.507774 | 1.2:+54227421 | None:intergenic |
| GCTGGTGGTTGTGGAGCAGC+AGG | 0.508567 | 1.2:+54226114 | None:intergenic |
| AAGCTCATGGAAGAAAATGT+TGG | 0.509498 | 1.2:-54224194 | MS.gene50572:CDS |
| GTGGGAGAAACCAACCAGCT+TGG | 0.509556 | 1.2:-54224256 | MS.gene50572:CDS |
| ACCACTTCTCCCAAGCTGGT+TGG | 0.515047 | 1.2:+54224246 | None:intergenic |
| AGCAGGAACTGTAGTAGGCA+TGG | 0.515934 | 1.2:+54226131 | None:intergenic |
| AGCAATGCGTCCTAGAGTGC+GGG | 0.522730 | 1.2:-54226094 | MS.gene50572:CDS |
| TATTGCAGATGCCAGTGAGA+TGG | 0.526193 | 1.2:+54224127 | None:intergenic |
| CACCCTTTCAGCGATGCTGT+GGG | 0.526622 | 1.2:+54226047 | None:intergenic |
| AGTTGTCCGACGGTTGCGAT+TGG | 0.526806 | 1.2:+54224102 | None:intergenic |
| ACCAACCAGCTTGGGAGAAG+TGG | 0.527139 | 1.2:-54224247 | MS.gene50572:CDS |
| GAGTTAAGCTGCAGCATCAT+CGG | 0.527777 | 1.2:+54227401 | None:intergenic |
| TCCTCCAGCGCCAAGGTGAG+AGG | 0.528910 | 1.2:+54227367 | None:intergenic |
| ATCCCCACAGCATCGCTGAA+AGG | 0.531960 | 1.2:-54226050 | MS.gene50572:CDS |
| TTAGACCACTTCTCCCAAGC+TGG | 0.534418 | 1.2:+54224242 | None:intergenic |
| CTGCATAATGCCCATCTCAC+TGG | 0.536918 | 1.2:-54224138 | MS.gene50572:CDS |
| CTGATGAAGCTTCCGGGAGT+GGG | 0.540261 | 1.2:-54227274 | MS.gene50572:CDS |
| AGGAAGAAGGAAGTGAGAGT+GGG | 0.541139 | 1.2:-54224274 | MS.gene50572:CDS |
| GATGCAGTTTCTTCAATCAA+AGG | 0.543892 | 1.2:-54224165 | MS.gene50572:CDS |
| CGAAGGCATGTCTATGGAGG+AGG | 0.550678 | 1.2:+54224053 | None:intergenic |
| TACCAGTGGAGCCACTGCAC+CGG | 0.556175 | 1.2:+54224401 | None:intergenic |
| AGTGCGGGCAAGAAGAGGAC+AGG | 0.556988 | 1.2:-54226079 | MS.gene50572:CDS |
| AGAAGCGTCGGTTCCGTCGG+CGG | 0.557440 | 1.2:+54227424 | None:intergenic |
| AAAGCAAGTAGCTAAGCTCA+TGG | 0.563532 | 1.2:-54224207 | MS.gene50572:CDS |
| AAAACCCTCCGCCTTTACCC+TGG | 0.569053 | 1.2:+54227303 | None:intergenic |
| TGGGAGAAGTGGTCTAATGA+TGG | 0.569736 | 1.2:-54224236 | MS.gene50572:CDS |
| ATTGGGTGGAGCCGGTGCAG+TGG | 0.571354 | 1.2:-54224412 | MS.gene50572:CDS |
| TGGACCAGGGTAAAGGCGGA+GGG | 0.572928 | 1.2:-54227307 | MS.gene50572:CDS |
| CCTAGAGTGCGGGCAAGAAG+AGG | 0.581308 | 1.2:-54226084 | MS.gene50572:CDS |
| GCAGGAACTGTAGTAGGCAT+GGG | 0.583605 | 1.2:+54226132 | None:intergenic |
| TGTTCAAGGAAATCGTCGGC+GGG | 0.587670 | 1.2:+54227473 | None:intergenic |
| GAAACCCTCCTCCAGCGCCA+AGG | 0.593872 | 1.2:+54227360 | None:intergenic |
| CAGCAATGCGTCCTAGAGTG+CGG | 0.594668 | 1.2:-54226095 | MS.gene50572:CDS |
| TTGAGCATGAGTAGATTGGG+TGG | 0.604660 | 1.2:-54224426 | MS.gene50572:CDS |
| CAGCATCATCGGAGAAGCGT+CGG | 0.604818 | 1.2:+54227412 | None:intergenic |
| TTGTATCAACAAGATCCTCC+CGG | 0.608383 | 1.2:+54227243 | None:intergenic |
| AGCTTGGACCAGGGTAAAGG+CGG | 0.611354 | 1.2:-54227311 | MS.gene50572:CDS |
| AAGAATAGCTGAAAGAATCA+GGG | 0.613018 | 1.2:-54225888 | MS.gene50572:CDS |
| TCGTCGGCGGGTGTATCGGA+AGG | 0.615492 | 1.2:+54227485 | None:intergenic |
| TTGGGGTTGAGCTTGGACCA+GGG | 0.616126 | 1.2:-54227320 | MS.gene50572:CDS |
| TGCCATGCTGGATGAAATTG+TGG | 0.617577 | 1.2:-54225073 | MS.gene50572:CDS |
| ATCCACAATTTCATCCAGCA+TGG | 0.624370 | 1.2:+54225071 | None:intergenic |
| ACCCTTTCAGCGATGCTGTG+GGG | 0.628979 | 1.2:+54226048 | None:intergenic |
| TGTCGAAGGCATGTCTATGG+AGG | 0.632032 | 1.2:+54224050 | None:intergenic |
| ACTCTAGGACGCATTGCTGG+TGG | 0.633576 | 1.2:+54226099 | None:intergenic |
| TTGTTCAAGGAAATCGTCGG+CGG | 0.636210 | 1.2:+54227472 | None:intergenic |
| ATGATGCTGCAGCTTAACTC+CGG | 0.636220 | 1.2:-54227398 | MS.gene50572:CDS |
| ACTATACTGGAGTTGTCCGA+CGG | 0.639351 | 1.2:+54224092 | None:intergenic |
| TCATGTACCTTGTTGACACT+AGG | 0.645489 | 1.2:+54225848 | None:intergenic |
| GAGTGGGAAGCGTTTCCGGG+AGG | 0.662373 | 1.2:-54227258 | MS.gene50572:CDS |
| AATATACCAATCGCAACCGT+CGG | 0.663547 | 1.2:-54224108 | MS.gene50572:CDS |
| AATGGGATGTCAGTTACCAG+TGG | 0.664418 | 1.2:+54224387 | None:intergenic |
| ACTTGTTCCTAGTGTCAACA+AGG | 0.667852 | 1.2:-54225855 | MS.gene50572:intron |
| CATCCCATTATCGTCAGTCG+AGG | 0.668468 | 1.2:-54224373 | MS.gene50572:intron |
| GCTCATGGAAGAAAATGTTG+GGG | 0.678396 | 1.2:-54224192 | MS.gene50572:CDS |
| AATTTGTTCAAGGAAATCGT+CGG | 0.683744 | 1.2:+54227469 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATATATATATATTTTT+TGG | - | chr1.2:54226364-54226383 | MS.gene50572:intron | 0.0% |
| !!! | TATATATATATATATTTTTT+GGG | - | chr1.2:54226365-54226384 | MS.gene50572:intron | 0.0% |
| !! | TGAATAATGATTATATATTA+TGG | - | chr1.2:54224932-54224951 | MS.gene50572:intron | 10.0% |
| !!! | AAACTAATTTTGTTTAATTT+TGG | - | chr1.2:54224432-54224451 | MS.gene50572:CDS | 10.0% |
| !!! | AAATTTTATAATATATTGTC+TGG | + | chr1.2:54227257-54227276 | None:intergenic | 10.0% |
| !!! | ACGATAAATTTTATTTTTAA+GGG | + | chr1.2:54224814-54224833 | None:intergenic | 10.0% |
| !!! | TACGATAAATTTTATTTTTA+AGG | + | chr1.2:54224815-54224834 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTATTGCAATAT+AGG | - | chr1.2:54225744-54225763 | MS.gene50572:intron | 10.0% |
| !! | TAATGATTATATATTATGGA+AGG | - | chr1.2:54224936-54224955 | MS.gene50572:intron | 15.0% |
| !! | TTAAGATATTAGAAAATACA+GGG | + | chr1.2:54225232-54225251 | None:intergenic | 15.0% |
| !!! | ATATTTATTACAATTAGTCT+GGG | - | chr1.2:54226229-54226248 | MS.gene50572:intron | 15.0% |
| !!! | ATTTGATTTCTATCTTTTTT+AGG | - | chr1.2:54226575-54226594 | MS.gene50572:intron | 15.0% |
| !!! | ATTTTATGTAATTGTAATCT+TGG | - | chr1.2:54225960-54225979 | MS.gene50572:intron | 15.0% |
| !!! | TAATTTTGTTTAATTTTGGT+GGG | - | chr1.2:54224436-54224455 | MS.gene50572:intron | 15.0% |
| !!! | TATAAAATTTTGTATTGTTC+AGG | - | chr1.2:54227267-54227286 | MS.gene50572:CDS | 15.0% |
| !!! | TTTAAGATATTAGAAAATAC+AGG | + | chr1.2:54225233-54225252 | None:intergenic | 15.0% |
| !!! | TTTGTAATCATTATTTTGTT+GGG | - | chr1.2:54226679-54226698 | MS.gene50572:intron | 15.0% |
| !! | AATAAAATCAAATGGCTAAT+GGG | + | chr1.2:54226750-54226769 | None:intergenic | 20.0% |
| !! | AATTGTATCTTAATATTCAC+CGG | + | chr1.2:54226781-54226800 | None:intergenic | 20.0% |
| !! | ACTTTATATATCATTAAGAC+AGG | + | chr1.2:54225386-54225405 | None:intergenic | 20.0% |
| !! | CATATTTATTACAATTAGTC+TGG | - | chr1.2:54226228-54226247 | MS.gene50572:intron | 20.0% |
| !! | TAACATAATGCAAATAAGTT+AGG | + | chr1.2:54225149-54225168 | None:intergenic | 20.0% |
| !! | TAAGATATTAGAAAATACAG+GGG | + | chr1.2:54225231-54225250 | None:intergenic | 20.0% |
| !! | TTATGTTAAGTTACATTCTT+AGG | + | chr1.2:54224346-54224365 | None:intergenic | 20.0% |
| !! | TTATTCATTCATCTTTAAGT+TGG | + | chr1.2:54224919-54224938 | None:intergenic | 20.0% |
| !!! | AACTGATTTTGGTATTAAAT+TGG | + | chr1.2:54226129-54226148 | None:intergenic | 20.0% |
| !!! | CTAATTTTGTTTAATTTTGG+TGG | - | chr1.2:54224435-54224454 | MS.gene50572:intron | 20.0% |
| !!! | CTTTGTAATCATTATTTTGT+TGG | - | chr1.2:54226678-54226697 | MS.gene50572:intron | 20.0% |
| !!! | CTTTTTTAGGTCTATAATTA+AGG | - | chr1.2:54226588-54226607 | MS.gene50572:intron | 20.0% |
| !!! | TATATATATTTTTTGGGACT+TGG | - | chr1.2:54226371-54226390 | MS.gene50572:intron | 20.0% |
| !!! | TTTTCTGCTATATTTACATT+CGG | + | chr1.2:54225028-54225047 | None:intergenic | 20.0% |
| !!! | TTTTGTTGAAAACTAGATAT+TGG | + | chr1.2:54226938-54226957 | None:intergenic | 20.0% |
| ! | AAATTTACATTTCTGCCTTT+GGG | - | chr1.2:54225321-54225340 | MS.gene50572:intron | 25.0% |
| ! | AAGGCAGAAATGTAAATTTA+AGG | + | chr1.2:54225320-54225339 | None:intergenic | 25.0% |
| ! | AATACTGAATACATAGTACT+TGG | - | chr1.2:54225252-54225271 | MS.gene50572:intron | 25.0% |
| ! | AATTATTCAAATCATGTCGT+TGG | - | chr1.2:54227212-54227231 | MS.gene50572:intron | 25.0% |
| ! | ACAGTGTATTACTATTTATC+TGG | - | chr1.2:54224504-54224523 | MS.gene50572:intron | 25.0% |
| ! | ATCATCTGTTTAAGCTAAAT+TGG | - | chr1.2:54224463-54224482 | MS.gene50572:intron | 25.0% |
| ! | ATGGAAATATTATACAGAAG+AGG | + | chr1.2:54226423-54226442 | None:intergenic | 25.0% |
| ! | ATTATATATTATGGAAGGTG+TGG | - | chr1.2:54224941-54224960 | MS.gene50572:intron | 25.0% |
| ! | CAGTGTATTACTATTTATCT+GGG | - | chr1.2:54224505-54224524 | MS.gene50572:intron | 25.0% |
| ! | CATTGAAAATTAGACCTATT+TGG | + | chr1.2:54226901-54226920 | None:intergenic | 25.0% |
| ! | CGAATGATTAACATTTAATG+AGG | - | chr1.2:54225561-54225580 | MS.gene50572:intron | 25.0% |
| ! | GAAAACATTTCAGACTTTAA+TGG | - | chr1.2:54224643-54224662 | MS.gene50572:intron | 25.0% |
| ! | GAATAAAATCAAATGGCTAA+TGG | + | chr1.2:54226751-54226770 | None:intergenic | 25.0% |
| ! | GTTGCTGACAAATTTAAATT+TGG | + | chr1.2:54227057-54227076 | None:intergenic | 25.0% |
| ! | TAAATTTACATTTCTGCCTT+TGG | - | chr1.2:54225320-54225339 | MS.gene50572:intron | 25.0% |
| ! | TCATCGTGAATAAAATCAAA+TGG | + | chr1.2:54226758-54226777 | None:intergenic | 25.0% |
| ! | TGGATTATGTCAAATTCTTA+AGG | - | chr1.2:54226508-54226527 | MS.gene50572:intron | 25.0% |
| !! | TCATCTTTTAACCTTTTGAT+AGG | + | chr1.2:54226262-54226281 | None:intergenic | 25.0% |
| !! | TTATATATTATGGAAGGTGT+GGG | - | chr1.2:54224942-54224961 | MS.gene50572:intron | 25.0% |
| !!! | AATATAGCAGAAAAAGTACT+TGG | - | chr1.2:54225034-54225053 | MS.gene50572:intron | 25.0% |
| !!! | ACACAATCTAAAACTGATTT+TGG | + | chr1.2:54226140-54226159 | None:intergenic | 25.0% |
| !!! | ATACACAGTTTTAGATACAA+TGG | + | chr1.2:54226442-54226461 | None:intergenic | 25.0% |
| !!! | GAATTGTTATTGGTTTTTGT+GGG | - | chr1.2:54224839-54224858 | MS.gene50572:intron | 25.0% |
| !!! | TGAATTGTTATTGGTTTTTG+TGG | - | chr1.2:54224838-54224857 | MS.gene50572:intron | 25.0% |
| AAACTAGCAGTAAGTAAGAA+TGG | - | chr1.2:54224673-54224692 | MS.gene50572:intron | 30.0% | |
| AAACTAGCAGTAAGTAAGAA+TGG | + | chr1.2:54224692-54224673 | None:intergenic | 30.0% | |
| AAAGAATAGCTGAAAGAATC+AGG | - | chr1.2:54225672-54225691 | MS.gene50572:intron | 30.0% | |
| AAATCACATTGCTAATTCCT+TGG | - | chr1.2:54225587-54225606 | MS.gene50572:intron | 30.0% | |
| AAATTTCATGTTCGCCAAAT+CGG | + | chr1.2:54226307-54226326 | None:intergenic | 30.0% | |
| AAGAATAGCTGAAAGAATCA+GGG | - | chr1.2:54225673-54225692 | MS.gene50572:intron | 30.0% | |
| AATAATATCCAACTATCCGA+AGG | - | chr1.2:54226846-54226865 | MS.gene50572:intron | 30.0% | |
| AATTAAATCATCCTTCGAGT+GGG | + | chr1.2:54226061-54226080 | None:intergenic | 30.0% | |
| ATAATATCCAACTATCCGAA+GGG | - | chr1.2:54226847-54226866 | MS.gene50572:intron | 30.0% | |
| ATCGTAGCATGAATTGTTAT+TGG | - | chr1.2:54224829-54224848 | MS.gene50572:intron | 30.0% | |
| CTGATACTTTATCTCAGAAA+TGG | - | chr1.2:54224709-54224728 | MS.gene50572:intron | 30.0% | |
| GAAATCAAATGTGAAATCCA+TGG | + | chr1.2:54226565-54226584 | None:intergenic | 30.0% | |
| GATTTCCTTGAACAAATTCT+CGG | - | chr1.2:54224097-54224116 | MS.gene50572:CDS | 30.0% | |
| GGAAACATTTCAGACTTTAA+TGG | + | chr1.2:54225128-54225147 | None:intergenic | 30.0% | |
| GGTGAAGTAACAAGTTATTT+GGG | - | chr1.2:54224753-54224772 | MS.gene50572:intron | 30.0% | |
| TAAAGATCATACACCAAGTT+AGG | + | chr1.2:54224883-54224902 | None:intergenic | 30.0% | |
| TAAGATACGGAGACAAAATT+TGG | - | chr1.2:54225842-54225861 | MS.gene50572:intron | 30.0% | |
| TAATGATTACAAAGAGTGAG+AGG | + | chr1.2:54226672-54226691 | None:intergenic | 30.0% | |
| TCAATTGTCTTTCACCAAAT+AGG | - | chr1.2:54226884-54226903 | MS.gene50572:intron | 30.0% | |
| TCGGATAGTTGGATATTATT+GGG | + | chr1.2:54226846-54226865 | None:intergenic | 30.0% | |
| TGGTGAAGTAACAAGTTATT+TGG | - | chr1.2:54224752-54224771 | MS.gene50572:intron | 30.0% | |
| TGTTTAAGCTAAATTGGACT+TGG | - | chr1.2:54224469-54224488 | MS.gene50572:intron | 30.0% | |
| TTCGGATAGTTGGATATTAT+TGG | + | chr1.2:54226847-54226866 | None:intergenic | 30.0% | |
| ! | AACAAAAACAGTGCTGAAAT+TGG | - | chr1.2:54225889-54225908 | MS.gene50572:CDS | 30.0% |
| ! | AAGTTTTTGCAGACTTTTCA+TGG | - | chr1.2:54225402-54225421 | MS.gene50572:intron | 30.0% |
| ! | AATTTGTTCAAGGAAATCGT+CGG | + | chr1.2:54224095-54224114 | None:intergenic | 30.0% |
| ! | AGTTTTTGCAGACTTTTCAT+GGG | - | chr1.2:54225403-54225422 | MS.gene50572:intron | 30.0% |
| ! | TGTTCTTTTGTCTATCTTTC+AGG | - | chr1.2:54227110-54227129 | MS.gene50572:intron | 30.0% |
| ! | TTGATTTTATTCACGATGAC+CGG | - | chr1.2:54226759-54226778 | MS.gene50572:intron | 30.0% |
| ! | TTGTGTTTGAGTTTGGAAAA+TGG | - | chr1.2:54226089-54226108 | MS.gene50572:CDS | 30.0% |
| ! | TTTTGTATTGTTCAGGAAGA+AGG | - | chr1.2:54227274-54227293 | MS.gene50572:CDS | 30.0% |
| !! | AAATAACTTGTTACTTCACC+AGG | + | chr1.2:54224753-54224772 | None:intergenic | 30.0% |
| !! | TAATTAAGGTTAGCTTGAAC+TGG | - | chr1.2:54226602-54226621 | MS.gene50572:intron | 30.0% |
| !! | TTATTTTGTTGGGATTCAAC+TGG | - | chr1.2:54226689-54226708 | MS.gene50572:intron | 30.0% |
| !! | TTCTGAAGTATAAAGTCTTC+TGG | - | chr1.2:54226333-54226352 | MS.gene50572:intron | 30.0% |
| !!! | TTTCAGCACTGTTTTTGTTT+CGG | + | chr1.2:54225888-54225907 | None:intergenic | 30.0% |
| AAAAATTATGCCAGCTCAGT+TGG | - | chr1.2:54224592-54224611 | MS.gene50572:intron | 35.0% | |
| AAGCTCATGGAAGAAAATGT+TGG | - | chr1.2:54227367-54227386 | MS.gene50572:CDS | 35.0% | |
| ACTTCAGAGTAAACACGAAA+AGG | + | chr1.2:54225818-54225837 | None:intergenic | 35.0% | |
| AGCTCATGGAAGAAAATGTT+GGG | - | chr1.2:54227368-54227387 | MS.gene50572:CDS | 35.0% | |
| AGTATTGTTCAATGCGTACT+TGG | - | chr1.2:54225985-54226004 | MS.gene50572:intron | 35.0% | |
| AGTTTCAGGCTTAACTATAC+TGG | + | chr1.2:54227485-54227504 | None:intergenic | 35.0% | |
| ATTCTTAAGGCTTCAAGTGA+AGG | - | chr1.2:54226521-54226540 | MS.gene50572:intron | 35.0% | |
| CATTAGCATTAAGCATACCA+AGG | + | chr1.2:54225607-54225626 | None:intergenic | 35.0% | |
| CTTCAGAGTAAACACGAAAA+GGG | + | chr1.2:54225817-54225836 | None:intergenic | 35.0% | |
| GAATTAAATCATCCTTCGAG+TGG | + | chr1.2:54226062-54226081 | None:intergenic | 35.0% | |
| GATAGTTGGATATTATTGGG+TGG | + | chr1.2:54226843-54226862 | None:intergenic | 35.0% | |
| GATGCAGTTTCTTCAATCAA+AGG | - | chr1.2:54227396-54227415 | MS.gene50572:CDS | 35.0% | |
| GATTGTGTACATGCTCTTAA+AGG | - | chr1.2:54226152-54226171 | MS.gene50572:intron | 35.0% | |
| TACTGTTGGCAATGTCTAAA+TGG | + | chr1.2:54225193-54225212 | None:intergenic | 35.0% | |
| TCTAAATGGCTATTCTCAGT+TGG | + | chr1.2:54225179-54225198 | None:intergenic | 35.0% | |
| TGATTTCTCTAGACACATGT+GGG | - | chr1.2:54226974-54226993 | MS.gene50572:intron | 35.0% | |
| TGGGAAACAATCCTATCAAA+AGG | - | chr1.2:54226248-54226267 | MS.gene50572:intron | 35.0% | |
| TGGTTAAAGTAGCAACAACA+TGG | + | chr1.2:54226823-54226842 | None:intergenic | 35.0% | |
| TGTACATGAAAGTGAAAGCA+AGG | - | chr1.2:54227018-54227037 | MS.gene50572:intron | 35.0% | |
| TTACTATTTATCTGGGTCTC+AGG | - | chr1.2:54224512-54224531 | MS.gene50572:intron | 35.0% | |
| ! | ACCTCTCATGTTCTGTTTTA+CGG | - | chr1.2:54226195-54226214 | MS.gene50572:intron | 35.0% |
| ! | TAACTCGTTGTGTTTGAGTT+TGG | - | chr1.2:54226082-54226101 | MS.gene50572:CDS | 35.0% |
| ! | TTTTTGTGGGTGGTTCATTT+TGG | - | chr1.2:54224852-54224871 | MS.gene50572:intron | 35.0% |
| !! | AGCTAAATTGGACTTGGTTT+TGG | - | chr1.2:54224475-54224494 | MS.gene50572:intron | 35.0% |
| !! | CTCTGAAGTGAGATAAGATA+CGG | - | chr1.2:54225829-54225848 | MS.gene50572:intron | 35.0% |
| !! | GTCAAAAGGCATTGGTAAAT+AGG | + | chr1.2:54226650-54226669 | None:intergenic | 35.0% |
| !! | GTTTTGAGCATGAGTAGATT+GGG | - | chr1.2:54227132-54227151 | MS.gene50572:intron | 35.0% |
| !!! | TATTTTTTGGGACTTGGTTG+TGG | - | chr1.2:54226377-54226396 | MS.gene50572:intron | 35.0% |
| !!! | TTCAGCACTGTTTTTGTTTC+GGG | + | chr1.2:54225887-54225906 | None:intergenic | 35.0% |
| !!! | TTGTTATTGGTTTTTGTGGG+TGG | - | chr1.2:54224842-54224861 | MS.gene50572:intron | 35.0% |
| AAAGCAAGTAGCTAAGCTCA+TGG | - | chr1.2:54227354-54227373 | MS.gene50572:CDS | 40.0% | |
| AATACCAATGCCTAGCAACA+AGG | + | chr1.2:54225943-54225962 | None:intergenic | 40.0% | |
| AATATACCAATCGCAACCGT+CGG | - | chr1.2:54227453-54227472 | MS.gene50572:CDS | 40.0% | |
| ACAAAGAGTGAGAGGTCAAA+AGG | + | chr1.2:54226664-54226683 | None:intergenic | 40.0% | |
| ACCGTAAAACAGAACATGAG+AGG | + | chr1.2:54226199-54226218 | None:intergenic | 40.0% | |
| ACTTGTTCCTAGTGTCAACA+AGG | - | chr1.2:54225706-54225725 | MS.gene50572:intron | 40.0% | |
| AGACAGGAAAAAATGCTCCT+TGG | + | chr1.2:54225370-54225389 | None:intergenic | 40.0% | |
| ATCCACAATTTCATCCAGCA+TGG | + | chr1.2:54226493-54226512 | None:intergenic | 40.0% | |
| ATTACCTCGACTGACGATAA+TGG | + | chr1.2:54227195-54227214 | None:intergenic | 40.0% | |
| CATGTGTCTAGAGAAATCAC+TGG | + | chr1.2:54226973-54226992 | None:intergenic | 40.0% | |
| CTAAATTAGCCCACCCAAAT+TGG | + | chr1.2:54224555-54224574 | None:intergenic | 40.0% | |
| CTCAACCCCAAATGATAAAC+CGG | + | chr1.2:54224232-54224251 | None:intergenic | 40.0% | |
| GCTCATGGAAGAAAATGTTG+GGG | - | chr1.2:54227369-54227388 | MS.gene50572:CDS | 40.0% | |
| GTGATTTCTCTAGACACATG+TGG | - | chr1.2:54226973-54226992 | MS.gene50572:intron | 40.0% | |
| TAGACATTGCCAACAGTACT+TGG | - | chr1.2:54225195-54225214 | MS.gene50572:intron | 40.0% | |
| TATGGAGGAGGAATAGTTTC+AGG | + | chr1.2:54227499-54227518 | None:intergenic | 40.0% | |
| TCATGTACCTTGTTGACACT+AGG | + | chr1.2:54225716-54225735 | None:intergenic | 40.0% | |
| TCTATAGAACTTGCGCAATC+AGG | - | chr1.2:54225782-54225801 | MS.gene50572:intron | 40.0% | |
| TCTGCATATAGTCTCCGATT+TGG | - | chr1.2:54226290-54226309 | MS.gene50572:intron | 40.0% | |
| TTACCTCGACTGACGATAAT+GGG | + | chr1.2:54227194-54227213 | None:intergenic | 40.0% | |
| TTGTATCAACAAGATCCTCC+CGG | + | chr1.2:54224321-54224340 | None:intergenic | 40.0% | |
| TTTACATTTCTGCCTTTGGG+AGG | - | chr1.2:54225324-54225343 | MS.gene50572:intron | 40.0% | |
| ! | AAAACGACTCCAAGTACTGT+TGG | + | chr1.2:54225207-54225226 | None:intergenic | 40.0% |
| ! | ACATGAGAGGTATGCTTATC+TGG | + | chr1.2:54226186-54226205 | None:intergenic | 40.0% |
| ! | CTATAGTTCTACACAGACAC+TGG | - | chr1.2:54226023-54226042 | MS.gene50572:intron | 40.0% |
| ! | GAAGACCGAGAATTTGTTCA+AGG | + | chr1.2:54224105-54224124 | None:intergenic | 40.0% |
| ! | TATTATGGAAGGTGTGGGAT+TGG | - | chr1.2:54224947-54224966 | MS.gene50572:intron | 40.0% |
| ! | TGCTGAAATTGGAGCTTTGT+GGG | - | chr1.2:54225900-54225919 | MS.gene50572:CDS | 40.0% |
| ! | TTACATTTCTGCCTTTGGGA+GGG | - | chr1.2:54225325-54225344 | MS.gene50572:intron | 40.0% |
| ! | TTATCATTTGGGGTTGAGCT+TGG | - | chr1.2:54224234-54224253 | MS.gene50572:CDS | 40.0% |
| ! | TTTTCCTTGTTGCTAGGCAT+TGG | - | chr1.2:54225936-54225955 | MS.gene50572:intron | 40.0% |
| !! | ATGCACCGGTTTATCATTTG+GGG | - | chr1.2:54224224-54224243 | MS.gene50572:CDS | 40.0% |
| !! | CATGCACCGGTTTATCATTT+GGG | - | chr1.2:54224223-54224242 | MS.gene50572:CDS | 40.0% |
| !! | GACTGATTTTCCTTGTTGCT+AGG | - | chr1.2:54225930-54225949 | MS.gene50572:intron | 40.0% |
| !! | GAGCTTAGCTACTTGCTTTT+CGG | + | chr1.2:54227353-54227372 | None:intergenic | 40.0% |
| !! | TCATGCACCGGTTTATCATT+TGG | - | chr1.2:54224222-54224241 | MS.gene50572:CDS | 40.0% |
| !!! | GGTTTTGAGCATGAGTAGAT+TGG | - | chr1.2:54227131-54227150 | MS.gene50572:intron | 40.0% |
| !!! | TCTGCGCAACTGTTTTTGAA+CGG | + | chr1.2:54225651-54225670 | None:intergenic | 40.0% |
| AATGGGATGTCAGTTACCAG+TGG | + | chr1.2:54227177-54227196 | None:intergenic | 45.0% | |
| ACTATACTGGAGTTGTCCGA+CGG | + | chr1.2:54227472-54227491 | None:intergenic | 45.0% | |
| AGAACTTGCGCAATCAGGTA+AGG | - | chr1.2:54225787-54225806 | MS.gene50572:intron | 45.0% | |
| AGGAAGAAGGAAGTGAGAGT+GGG | - | chr1.2:54227287-54227306 | MS.gene50572:CDS | 45.0% | |
| AGGGTCATGCTATGACAAGT+TGG | + | chr1.2:54224795-54224814 | None:intergenic | 45.0% | |
| ATGATGCTGCAGCTTAACTC+CGG | - | chr1.2:54224163-54224182 | MS.gene50572:CDS | 45.0% | |
| ATTGCAGATGCCAGTGAGAT+GGG | + | chr1.2:54227436-54227455 | None:intergenic | 45.0% | |
| CATTCTTCAATTCAGCTGCC+TGG | - | chr1.2:54224732-54224751 | MS.gene50572:intron | 45.0% | |
| GAGTTAAGCTGCAGCATCAT+CGG | + | chr1.2:54224163-54224182 | None:intergenic | 45.0% | |
| GTGAAAGCAAGGCTCTTCAT+TGG | - | chr1.2:54227029-54227048 | MS.gene50572:intron | 45.0% | |
| GTGCTGAAATTGGAGCTTTG+TGG | - | chr1.2:54225899-54225918 | MS.gene50572:CDS | 45.0% | |
| GTGGTCTGCTGTATTTCTCT+TGG | - | chr1.2:54226396-54226415 | MS.gene50572:intron | 45.0% | |
| TAAGCTACTACCAACTGAGC+TGG | + | chr1.2:54224605-54224624 | None:intergenic | 45.0% | |
| TATTGCAGATGCCAGTGAGA+TGG | + | chr1.2:54227437-54227456 | None:intergenic | 45.0% | |
| TGCCATGCTGGATGAAATTG+TGG | - | chr1.2:54226488-54226507 | MS.gene50572:intron | 45.0% | |
| TGGGAGAAGTGGTCTAATGA+TGG | - | chr1.2:54227325-54227344 | MS.gene50572:CDS | 45.0% | |
| TTGAAGCCTGATGAAGCTTC+CGG | - | chr1.2:54224280-54224299 | MS.gene50572:intron | 45.0% | |
| TTGAGCATGAGTAGATTGGG+TGG | - | chr1.2:54227135-54227154 | MS.gene50572:intron | 45.0% | |
| TTGTTCAAGGAAATCGTCGG+CGG | + | chr1.2:54224092-54224111 | None:intergenic | 45.0% | |
| ! | AGTGAGAGGTCAAAAGGCAT+TGG | + | chr1.2:54226658-54226677 | None:intergenic | 45.0% |
| ! | GCTGAAATTGGAGCTTTGTG+GGG | - | chr1.2:54225901-54225920 | MS.gene50572:CDS | 45.0% |
| ! | TAATGGGTCCCATACCAAAG+TGG | + | chr1.2:54226734-54226753 | None:intergenic | 45.0% |
| ! | TAGTGCTTTTGTGAGCTCCA+TGG | - | chr1.2:54226545-54226564 | MS.gene50572:intron | 45.0% |
| ! | TGAGAGGTATGCTTATCTGG+AGG | + | chr1.2:54226183-54226202 | None:intergenic | 45.0% |
| !! | ATTCTCCTCGGTGCCAATTT+GGG | - | chr1.2:54224539-54224558 | MS.gene50572:intron | 45.0% |
| !! | CTGAGATGCCACTTTGGTAT+GGG | - | chr1.2:54226723-54226742 | MS.gene50572:intron | 45.0% |
| !!! | CATTTTGGTAGCGCCTAACT+TGG | - | chr1.2:54224867-54224886 | MS.gene50572:intron | 45.0% |
| AGCAGGAACTGTAGTAGGCA+TGG | + | chr1.2:54225433-54225452 | None:intergenic | 50.0% | |
| AGTCCACAGTTGAAGCCCTT+CGG | + | chr1.2:54226865-54226884 | None:intergenic | 50.0% | |
| ATGAGTAGATTGGGTGGAGC+CGG | - | chr1.2:54227141-54227160 | MS.gene50572:intron | 50.0% | |
| CAGGAAGAAGGAAGTGAGAG+TGG | - | chr1.2:54227286-54227305 | MS.gene50572:CDS | 50.0% | |
| CATCCCATTATCGTCAGTCG+AGG | - | chr1.2:54227188-54227207 | MS.gene50572:intron | 50.0% | |
| CATGTCTGTTTCCCACTCGA+AGG | - | chr1.2:54226047-54226066 | MS.gene50572:intron | 50.0% | |
| CCATACCAAAGTGGCATCTC+AGG | + | chr1.2:54226725-54226744 | None:intergenic | 50.0% | |
| CTGCATAATGCCCATCTCAC+TGG | - | chr1.2:54227423-54227442 | MS.gene50572:CDS | 50.0% | |
| CTTGCGCAATCAGGTAAGGA+TGG | - | chr1.2:54225791-54225810 | MS.gene50572:intron | 50.0% | |
| GCAGGAACTGTAGTAGGCAT+GGG | + | chr1.2:54225432-54225451 | None:intergenic | 50.0% | |
| GTCTCAGGTTCGATTCTCCT+CGG | - | chr1.2:54224527-54224546 | MS.gene50572:intron | 50.0% | |
| GTTGAAGCCCTTCGGATAGT+TGG | + | chr1.2:54226857-54226876 | None:intergenic | 50.0% | |
| TATCCGAAGGGCTTCAACTG+TGG | - | chr1.2:54226859-54226878 | MS.gene50572:intron | 50.0% | |
| TGAAGCCTGATGAAGCTTCC+GGG | - | chr1.2:54224281-54224300 | MS.gene50572:intron | 50.0% | |
| TGGGAGAAACCAACCAGCTT+GGG | - | chr1.2:54227306-54227325 | MS.gene50572:CDS | 50.0% | |
| TGTTCAAGGAAATCGTCGGC+GGG | + | chr1.2:54224091-54224110 | None:intergenic | 50.0% | |
| TTAGACCACTTCTCCCAAGC+TGG | + | chr1.2:54227322-54227341 | None:intergenic | 50.0% | |
| TTGAGCTTGGACCAGGGTAA+AGG | - | chr1.2:54224247-54224266 | MS.gene50572:CDS | 50.0% | |
| !! | AGGGACTGGAGAAGTGTTGT+TGG | - | chr1.2:54225344-54225363 | MS.gene50572:intron | 50.0% |
| !! | CCTGAGATGCCACTTTGGTA+TGG | - | chr1.2:54226722-54226741 | MS.gene50572:intron | 50.0% |
| !! | GATTCTCCTCGGTGCCAATT+TGG | - | chr1.2:54224538-54224557 | MS.gene50572:intron | 50.0% |
| !! | TGGAGAAGTGTTGTTGGCCA+AGG | - | chr1.2:54225350-54225369 | MS.gene50572:intron | 50.0% |
| AAAACCCTCCGCCTTTACCC+TGG | + | chr1.2:54224261-54224280 | None:intergenic | 55.0% | |
| ACCAACCAGCTTGGGAGAAG+TGG | - | chr1.2:54227314-54227333 | MS.gene50572:CDS | 55.0% | |
| ACCACTTCTCCCAAGCTGGT+TGG | + | chr1.2:54227318-54227337 | None:intergenic | 55.0% | |
| ACCCTTTCAGCGATGCTGTG+GGG | + | chr1.2:54225516-54225535 | None:intergenic | 55.0% | |
| ACTTCTCCAGTCCCTCCCAA+AGG | + | chr1.2:54225339-54225358 | None:intergenic | 55.0% | |
| AGCAATGCGTCCTAGAGTGC+GGG | - | chr1.2:54225467-54225486 | MS.gene50572:intron | 55.0% | |
| AGCTTGGACCAGGGTAAAGG+CGG | - | chr1.2:54224250-54224269 | MS.gene50572:CDS | 55.0% | |
| AGTTGTCCGACGGTTGCGAT+TGG | + | chr1.2:54227462-54227481 | None:intergenic | 55.0% | |
| ATCCCCACAGCATCGCTGAA+AGG | - | chr1.2:54225511-54225530 | MS.gene50572:intron | 55.0% | |
| CACCCTTTCAGCGATGCTGT+GGG | + | chr1.2:54225517-54225536 | None:intergenic | 55.0% | |
| CAGCAATGCGTCCTAGAGTG+CGG | - | chr1.2:54225466-54225485 | MS.gene50572:intron | 55.0% | |
| CTGATGAAGCTTCCGGGAGT+GGG | - | chr1.2:54224287-54224306 | MS.gene50572:intron | 55.0% | |
| GAAATCGTCGGCGGGTGTAT+CGG | + | chr1.2:54224083-54224102 | None:intergenic | 55.0% | |
| GGAGCAGCAGGAACTGTAGT+AGG | + | chr1.2:54225438-54225457 | None:intergenic | 55.0% | |
| GTGGGAGAAACCAACCAGCT+TGG | - | chr1.2:54227305-54227324 | MS.gene50572:CDS | 55.0% | |
| TCACCCTTTCAGCGATGCTG+TGG | + | chr1.2:54225518-54225537 | None:intergenic | 55.0% | |
| TCCCCACAGCATCGCTGAAA+GGG | - | chr1.2:54225512-54225531 | MS.gene50572:intron | 55.0% | |
| TGGAGGAGGGTTTCATGCAC+CGG | - | chr1.2:54224210-54224229 | MS.gene50572:CDS | 55.0% | |
| TTGGGGTTGAGCTTGGACCA+GGG | - | chr1.2:54224241-54224260 | MS.gene50572:CDS | 55.0% | |
| ! | ATGGAAGGTGTGGGATTGGC+TGG | - | chr1.2:54224951-54224970 | MS.gene50572:intron | 55.0% |
| ! | CAGCATCATCGGAGAAGCGT+CGG | + | chr1.2:54224152-54224171 | None:intergenic | 55.0% |
| ! | GCGAACCTGAGATGCCACTT+TGG | - | chr1.2:54226717-54226736 | MS.gene50572:intron | 55.0% |
| ! | TTTCTGCCTTTGGGAGGGAC+TGG | - | chr1.2:54225330-54225349 | MS.gene50572:intron | 55.0% |
| ! | TTTGGGGTTGAGCTTGGACC+AGG | - | chr1.2:54224240-54224259 | MS.gene50572:CDS | 55.0% |
| !! | ACTCTAGGACGCATTGCTGG+TGG | + | chr1.2:54225465-54225484 | None:intergenic | 55.0% |
| !! | TCCTCGGTGCCAATTTGGGT+GGG | - | chr1.2:54224543-54224562 | MS.gene50572:intron | 55.0% |
| AGTGCGGGCAAGAAGAGGAC+AGG | - | chr1.2:54225482-54225501 | MS.gene50572:intron | 60.0% | |
| CCACTCCCGGAAGCTTCATC+AGG | + | chr1.2:54224289-54224308 | None:intergenic | 60.0% | |
| CCGAATTTCACCTCCGCCGA+CGG | - | chr1.2:54224124-54224143 | MS.gene50572:CDS | 60.0% | |
| CCGTCGGCGGAGGTGAAATT+CGG | + | chr1.2:54224127-54224146 | None:intergenic | 60.0% | |
| CCTAGAGTGCGGGCAAGAAG+AGG | - | chr1.2:54225477-54225496 | MS.gene50572:intron | 60.0% | |
| CCTCTTCTTGCCCGCACTCT+AGG | + | chr1.2:54225480-54225499 | None:intergenic | 60.0% | |
| CCTGATGAAGCTTCCGGGAG+TGG | - | chr1.2:54224286-54224305 | MS.gene50572:intron | 60.0% | |
| GACTGATCGAGCTGCCATGC+TGG | - | chr1.2:54226476-54226495 | MS.gene50572:intron | 60.0% | |
| GGACGCATTGCTGGTGGTTG+TGG | + | chr1.2:54225459-54225478 | None:intergenic | 60.0% | |
| TACCAGTGGAGCCACTGCAC+CGG | + | chr1.2:54227163-54227182 | None:intergenic | 60.0% | |
| TGGACCAGGGTAAAGGCGGA+GGG | - | chr1.2:54224254-54224273 | MS.gene50572:CDS | 60.0% | |
| TTGGACCAGGGTAAAGGCGG+AGG | - | chr1.2:54224253-54224272 | MS.gene50572:CDS | 60.0% | |
| !! | CGCACTCTAGGACGCATTGC+TGG | + | chr1.2:54225468-54225487 | None:intergenic | 60.0% |
| !! | CTCCTCGGTGCCAATTTGGG+TGG | - | chr1.2:54224542-54224561 | MS.gene50572:intron | 60.0% |
| AAGGTGAGAGGCAGCGTCGC+CGG | + | chr1.2:54224185-54224204 | None:intergenic | 65.0% | |
| ATTGGGTGGAGCCGGTGCAG+TGG | - | chr1.2:54227149-54227168 | MS.gene50572:intron | 65.0% | |
| CCGGAAACGCTTCCCACTCC+CGG | + | chr1.2:54224302-54224321 | None:intergenic | 65.0% | |
| GAAACCCTCCTCCAGCGCCA+AGG | + | chr1.2:54224204-54224223 | None:intergenic | 65.0% | |
| GCCCACCCAAATTGGCACCG+AGG | + | chr1.2:54224547-54224566 | None:intergenic | 65.0% | |
| GCTGGTGGTTGTGGAGCAGC+AGG | + | chr1.2:54225450-54225469 | None:intergenic | 65.0% | |
| TCCTCCAGCGCCAAGGTGAG+AGG | + | chr1.2:54224197-54224216 | None:intergenic | 65.0% | |
| TCGTCGGCGGGTGTATCGGA+AGG | + | chr1.2:54224079-54224098 | None:intergenic | 65.0% | |
| ! | CTCACCTTGGCGCTGGAGGA+GGG | - | chr1.2:54224197-54224216 | MS.gene50572:CDS | 65.0% |
| ! | TCTCACCTTGGCGCTGGAGG+AGG | - | chr1.2:54224196-54224215 | MS.gene50572:CDS | 65.0% |
| !! | AGAAGCGTCGGTTCCGTCGG+CGG | + | chr1.2:54224140-54224159 | None:intergenic | 65.0% |
| !! | CCGGGAGTGGGAAGCGTTTC+CGG | - | chr1.2:54224299-54224318 | MS.gene50572:intron | 65.0% |
| !! | CGGAGAAGCGTCGGTTCCGT+CGG | + | chr1.2:54224143-54224162 | None:intergenic | 65.0% |
| !! | CGGGAGTGGGAAGCGTTTCC+GGG | - | chr1.2:54224300-54224319 | MS.gene50572:intron | 65.0% |
| !! | GAGTGGGAAGCGTTTCCGGG+AGG | - | chr1.2:54224303-54224322 | MS.gene50572:intron | 65.0% |
| AGCCGGTGCAGTGGCTCCAC+TGG | - | chr1.2:54227158-54227177 | MS.gene50572:intron | 70.0% | |
| GCTGCCTCTCACCTTGGCGC+TGG | - | chr1.2:54224190-54224209 | MS.gene50572:CDS | 70.0% | |
| GGCGACGCTGCCTCTCACCT+TGG | - | chr1.2:54224184-54224203 | MS.gene50572:CDS | 70.0% | |
| ! | GCCTCTCACCTTGGCGCTGG+AGG | - | chr1.2:54224193-54224212 | MS.gene50572:CDS | 70.0% |
| !! | AGCGTCGGTTCCGTCGGCGG+AGG | + | chr1.2:54224137-54224156 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 54224064 | 54227519 | 54224064 | ID=MS.gene50572 |
| chr1.2 | mRNA | 54224064 | 54227519 | 54224064 | ID=MS.gene50572.t1;Parent=MS.gene50572 |
| chr1.2 | exon | 54227232 | 54227519 | 54227232 | ID=MS.gene50572.t1.exon1;Parent=MS.gene50572.t1 |
| chr1.2 | CDS | 54227232 | 54227519 | 54227232 | ID=cds.MS.gene50572.t1;Parent=MS.gene50572.t1 |
| chr1.2 | exon | 54226050 | 54226169 | 54226050 | ID=MS.gene50572.t1.exon2;Parent=MS.gene50572.t1 |
| chr1.2 | CDS | 54226050 | 54226169 | 54226050 | ID=cds.MS.gene50572.t1;Parent=MS.gene50572.t1 |
| chr1.2 | exon | 54225856 | 54225921 | 54225856 | ID=MS.gene50572.t1.exon3;Parent=MS.gene50572.t1 |
| chr1.2 | CDS | 54225856 | 54225921 | 54225856 | ID=cds.MS.gene50572.t1;Parent=MS.gene50572.t1 |
| chr1.2 | exon | 54225041 | 54225106 | 54225041 | ID=MS.gene50572.t1.exon4;Parent=MS.gene50572.t1 |
| chr1.2 | CDS | 54225041 | 54225106 | 54225041 | ID=cds.MS.gene50572.t1;Parent=MS.gene50572.t1 |
| chr1.2 | exon | 54224374 | 54224451 | 54224374 | ID=MS.gene50572.t1.exon5;Parent=MS.gene50572.t1 |
| chr1.2 | CDS | 54224374 | 54224451 | 54224374 | ID=cds.MS.gene50572.t1;Parent=MS.gene50572.t1 |
| chr1.2 | exon | 54224064 | 54224294 | 54224064 | ID=MS.gene50572.t1.exon6;Parent=MS.gene50572.t1 |
| chr1.2 | CDS | 54224064 | 54224294 | 54224064 | ID=cds.MS.gene50572.t1;Parent=MS.gene50572.t1 |
| Gene Sequence |
| Protein sequence |
