Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49756.t1 | KEH20950.1 | 94.5 | 636 | 28 | 1 | 1 | 636 | 1 | 629 | 0.00E+00 | 1206.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49756.t1 | Q3AD36 | 30.3 | 499 | 271 | 14 | 180 | 616 | 2 | 485 | 1.0e-45 | 186.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49756.t1 | A0A072U541 | 94.5 | 636 | 28 | 1 | 1 | 636 | 1 | 629 | 0.0e+00 | 1206.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050444 | MS.gene49756 | -0.8014 | 9.17E-49 | -1.69E-46 |
| MS.gene050710 | MS.gene49756 | 0.809357 | 1.97E-50 | -1.69E-46 |
| MS.gene051864 | MS.gene49756 | -0.837755 | 4.31E-57 | -1.69E-46 |
| MS.gene057717 | MS.gene49756 | 0.80515 | 1.53E-49 | -1.69E-46 |
| MS.gene058416 | MS.gene49756 | 0.807442 | 5.04E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene49756 | 0.803303 | 3.72E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene49756 | 0.809539 | 1.80E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49756.t1 | MTR_8g095600 | 94.497 | 636 | 28 | 1 | 1 | 636 | 1 | 629 | 0.0 | 1235 |
| MS.gene49756.t1 | MTR_8g095600 | 92.138 | 636 | 27 | 1 | 1 | 636 | 1 | 613 | 0.0 | 1196 |
| MS.gene49756.t1 | MTR_8g095600 | 90.789 | 608 | 33 | 1 | 1 | 608 | 1 | 585 | 0.0 | 1127 |
| MS.gene49756.t1 | MTR_8g095600 | 91.489 | 517 | 21 | 1 | 1 | 517 | 1 | 494 | 0.0 | 967 |
| MS.gene49756.t1 | MTR_8g080880 | 33.471 | 242 | 148 | 6 | 185 | 415 | 40 | 279 | 2.60e-31 | 129 |
| MS.gene49756.t1 | MTR_8g080890 | 33.462 | 260 | 160 | 7 | 167 | 415 | 23 | 280 | 4.67e-30 | 125 |
| MS.gene49756.t1 | MTR_8g080840 | 32.800 | 250 | 155 | 6 | 177 | 415 | 32 | 279 | 5.87e-29 | 121 |
| MS.gene49756.t1 | MTR_8g080870 | 32.400 | 250 | 156 | 6 | 177 | 415 | 3 | 250 | 1.16e-28 | 120 |
| MS.gene49756.t1 | MTR_4g074030 | 33.333 | 237 | 148 | 4 | 185 | 412 | 34 | 269 | 1.79e-28 | 120 |
| MS.gene49756.t1 | MTR_8g097220 | 31.967 | 244 | 153 | 6 | 177 | 409 | 29 | 270 | 1.50e-27 | 117 |
| MS.gene49756.t1 | MTR_3g048950 | 30.544 | 239 | 152 | 3 | 186 | 415 | 43 | 276 | 3.24e-22 | 101 |
| MS.gene49756.t1 | MTR_3g096980 | 24.395 | 496 | 309 | 16 | 169 | 614 | 119 | 598 | 3.95e-22 | 101 |
| MS.gene49756.t1 | MTR_8g094740 | 24.649 | 499 | 308 | 17 | 170 | 616 | 119 | 601 | 7.34e-19 | 91.3 |
| MS.gene49756.t1 | MTR_8g094740 | 26.020 | 392 | 257 | 13 | 170 | 534 | 119 | 504 | 2.49e-17 | 85.9 |
| MS.gene49756.t1 | MTR_1g082750 | 31.579 | 152 | 97 | 3 | 248 | 393 | 26 | 176 | 4.14e-17 | 84.7 |
| MS.gene49756.t1 | MTR_2g010180 | 28.571 | 189 | 125 | 4 | 231 | 412 | 178 | 363 | 3.82e-15 | 79.3 |
| MS.gene49756.t1 | MTR_2g010180 | 28.571 | 189 | 125 | 4 | 231 | 412 | 178 | 363 | 4.97e-15 | 79.0 |
| MS.gene49756.t1 | MTR_2g010180 | 28.571 | 189 | 125 | 4 | 231 | 412 | 192 | 377 | 5.45e-15 | 79.0 |
| MS.gene49756.t1 | MTR_4g094205 | 30.719 | 153 | 95 | 3 | 249 | 393 | 73 | 222 | 1.86e-13 | 73.9 |
| MS.gene49756.t1 | MTR_4g073970 | 44.444 | 72 | 40 | 0 | 341 | 412 | 1 | 72 | 1.43e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49756.t1 | AT5G07360 | 69.896 | 578 | 164 | 2 | 60 | 627 | 69 | 646 | 0.0 | 861 |
| MS.gene49756.t1 | AT5G07360 | 69.896 | 578 | 164 | 2 | 60 | 627 | 69 | 646 | 0.0 | 861 |
| MS.gene49756.t1 | AT5G07360 | 68.685 | 578 | 164 | 3 | 60 | 627 | 69 | 639 | 0.0 | 840 |
| MS.gene49756.t1 | AT4G34880 | 35.065 | 231 | 140 | 4 | 196 | 416 | 55 | 285 | 1.49e-28 | 120 |
| MS.gene49756.t1 | AT3G25660 | 30.837 | 227 | 143 | 3 | 197 | 415 | 57 | 277 | 3.43e-22 | 101 |
| MS.gene49756.t1 | AT5G64440 | 29.255 | 188 | 125 | 3 | 231 | 412 | 179 | 364 | 1.33e-17 | 87.0 |
| MS.gene49756.t1 | AT4G34880 | 30.045 | 223 | 116 | 7 | 196 | 416 | 55 | 239 | 4.03e-17 | 85.1 |
| MS.gene49756.t1 | AT1G08980 | 29.891 | 184 | 120 | 4 | 249 | 424 | 28 | 210 | 4.24e-15 | 78.6 |
| MS.gene49756.t1 | AT5G09420 | 30.120 | 166 | 98 | 4 | 249 | 404 | 71 | 228 | 5.09e-13 | 72.8 |
Find 166 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTGCAAAGCTTGTTTC+TGG | 0.145581 | 4.4:-7387640 | MS.gene49756:CDS |
| CGGCCGCCTATTAATGATTT+TGG | 0.178759 | 4.4:-7385469 | MS.gene49756:CDS |
| CCTCTTCATGGGATTCCTTA+TGG | 0.207420 | 4.4:-7387869 | MS.gene49756:CDS |
| GCAATATCTTCTTCAGATTC+TGG | 0.244608 | 4.4:+7388571 | None:intergenic |
| CTCAATATTCCATGGGTTCC+TGG | 0.249322 | 4.4:+7387579 | None:intergenic |
| GTTCAGTGGGCCACTGATCT+TGG | 0.295838 | 4.4:+7386625 | None:intergenic |
| GTTCATATATCCTTCTATTT+CGG | 0.304318 | 4.4:-7388605 | MS.gene49756:CDS |
| ACTGCATTGCGTCCAACTTT+TGG | 0.315166 | 4.4:-7387259 | MS.gene49756:CDS |
| TTTAACCAGGTTCTTGAGTT+AGG | 0.324762 | 4.4:-7388427 | MS.gene49756:intron |
| GGTTCAGAAACTGCATTTAC+AGG | 0.333670 | 4.4:+7389828 | None:intergenic |
| AGAAGGATATATGAACCTTT+TGG | 0.336084 | 4.4:+7388612 | None:intergenic |
| TGTTGTTCTGGATATTGTTC+GGG | 0.341121 | 4.4:-7387059 | MS.gene49756:CDS |
| AGAAGCTACAAGTTCTCTAT+TGG | 0.343289 | 4.4:+7388711 | None:intergenic |
| GTTACTACAGCTTCAAGAAT+AGG | 0.347909 | 4.4:+7388217 | None:intergenic |
| TGGAAGCTTGGATCTATAAA+AGG | 0.349207 | 4.4:-7387769 | MS.gene49756:intron |
| TTCGGACCAAAATCATTAAT+AGG | 0.351030 | 4.4:+7385463 | None:intergenic |
| TTCATTGAAGGGCCTCTTCA+TGG | 0.352867 | 4.4:-7387881 | MS.gene49756:intron |
| CTTACAATGTGATCATGGTT+AGG | 0.369584 | 4.4:+7385662 | None:intergenic |
| CCTCATTGATGACCCGTTCC+TGG | 0.369936 | 4.4:-7387002 | MS.gene49756:CDS |
| TTCAGTGGGCCACTGATCTT+GGG | 0.371795 | 4.4:+7386626 | None:intergenic |
| TTTACCGTGGATGCATTCAT+TGG | 0.377866 | 4.4:-7385833 | MS.gene49756:CDS |
| ACTTGATGCCAACTTCTTCA+AGG | 0.382626 | 4.4:-7388866 | MS.gene49756:CDS |
| CTTAGCCAAGGAGTCTATCT+AGG | 0.384637 | 4.4:-7388145 | MS.gene49756:intron |
| TGTTGATGTTCTTGCGTCAA+TGG | 0.386897 | 4.4:-7386784 | MS.gene49756:CDS |
| AAAGCTTGTTTCTGGATCAT+TGG | 0.387846 | 4.4:-7387632 | MS.gene49756:CDS |
| AATATTCTGCCGCAAATTGC+AGG | 0.389430 | 4.4:-7389501 | MS.gene49756:intron |
| GTAAACCTAAGGAACATCTT+AGG | 0.389631 | 4.4:+7388887 | None:intergenic |
| TACACAGTTGATTCTGTTCA+AGG | 0.391326 | 4.4:-7386732 | MS.gene49756:CDS |
| CTGTTGTTCTGGATATTGTT+CGG | 0.392117 | 4.4:-7387060 | MS.gene49756:CDS |
| GCTTATGATGATGTCTGGTT+TGG | 0.393636 | 4.4:-7387610 | MS.gene49756:CDS |
| AACTGATTGTGCTGTTGTTC+TGG | 0.393696 | 4.4:-7387071 | MS.gene49756:CDS |
| TTTGATCAGTGGCAGCGATC+AGG | 0.394043 | 4.4:-7386669 | MS.gene49756:CDS |
| TTTGGTACTGTTGGTCGAAC+TGG | 0.394321 | 4.4:-7387241 | MS.gene49756:CDS |
| CATTGGCTTATGATGATGTC+TGG | 0.399917 | 4.4:-7387615 | MS.gene49756:CDS |
| TTCAACAGGTTGAAATCTGC+AGG | 0.407055 | 4.4:-7387670 | MS.gene49756:intron |
| TATGATGATGTCTGGTTTGG+AGG | 0.417149 | 4.4:-7387607 | MS.gene49756:CDS |
| CTCCGTATCTCCGAAATAGA+AGG | 0.418422 | 4.4:+7388595 | None:intergenic |
| CCCTGCCTAAGATGTTCCTT+AGG | 0.419921 | 4.4:-7388892 | MS.gene49756:CDS |
| TGGGATTCCTTATGGATTGA+AGG | 0.421366 | 4.4:-7387861 | MS.gene49756:CDS |
| GCAGGCTCTGGCGTTGGCAA+TGG | 0.441140 | 4.4:-7385524 | MS.gene49756:intron |
| CCTGCTGAGGTACTTGCTGC+AGG | 0.447687 | 4.4:+7387529 | None:intergenic |
| CTGATCATCCTTGAAGAAGT+TGG | 0.448974 | 4.4:+7388858 | None:intergenic |
| AGCATAAATGCCGGTGGTGA+TGG | 0.450186 | 4.4:+7385688 | None:intergenic |
| TTACAATGTGATCATGGTTA+GGG | 0.450343 | 4.4:+7385663 | None:intergenic |
| CAACTTCTTCAAGGATGATC+AGG | 0.452601 | 4.4:-7388857 | MS.gene49756:intron |
| GTAACACCGCATCGAGCTGC+AGG | 0.456235 | 4.4:+7387280 | None:intergenic |
| ATCCTTCTATTTCGGAGATA+CGG | 0.461533 | 4.4:-7388597 | MS.gene49756:CDS |
| GAACTTGTAGCTTCTAAGAA+TGG | 0.462031 | 4.4:-7388703 | MS.gene49756:CDS |
| GTTGATGTTCTTGCGTCAAT+GGG | 0.462099 | 4.4:-7386783 | MS.gene49756:CDS |
| AGTAACTTATACAGAAGAAC+TGG | 0.464189 | 4.4:-7388200 | MS.gene49756:CDS |
| TCATTGAAGGGCCTCTTCAT+GGG | 0.464627 | 4.4:-7387880 | MS.gene49756:intron |
| CACAATGGATGTTGATATGC+TGG | 0.465451 | 4.4:-7386697 | MS.gene49756:CDS |
| TTGATCAGTGGCAGCGATCA+GGG | 0.470688 | 4.4:-7386668 | MS.gene49756:CDS |
| GAAAATTCCTCAATATTCCA+TGG | 0.474256 | 4.4:+7387571 | None:intergenic |
| CCAGTCATAGTAGTGCCAAC+AGG | 0.477969 | 4.4:-7385761 | MS.gene49756:CDS |
| ACCTAAGGAACATCTTAGGC+AGG | 0.478047 | 4.4:+7388891 | None:intergenic |
| GACATTACTAAGTTGACTGT+TGG | 0.478863 | 4.4:-7386977 | MS.gene49756:CDS |
| TCCAGCAGTGGACTATATAC+AGG | 0.480191 | 4.4:-7386583 | MS.gene49756:intron |
| TCTGGTTTGGAGGCAGAACC+AGG | 0.481401 | 4.4:-7387597 | MS.gene49756:CDS |
| CAGTTCACTGCGCAACCAAA+AGG | 0.481855 | 4.4:-7388627 | MS.gene49756:CDS |
| ACTAACTAACCTGCAATTTG+CGG | 0.486214 | 4.4:+7389492 | None:intergenic |
| GTTTCTGAACCTATCGCAAA+TGG | 0.486252 | 4.4:+7387322 | None:intergenic |
| TGAGGAAGGATATGCGAGAA+GGG | 0.489622 | 4.4:+7389728 | None:intergenic |
| TCGAGCTGCAGGGTAAGTTA+TGG | 0.491305 | 4.4:+7387291 | None:intergenic |
| TCATCCGGTATCTTATCATT+CGG | 0.492160 | 4.4:+7385445 | None:intergenic |
| TAGTAATGTCAACCAGGAAC+GGG | 0.492600 | 4.4:+7386990 | None:intergenic |
| CCGACACGTGGCAGAGGTGG+TGG | 0.497482 | 4.4:-7389807 | MS.gene49756:CDS |
| ATTATGTCCTTCAATCCATA+AGG | 0.498873 | 4.4:+7387854 | None:intergenic |
| TTATCTGCAGGCTCTGGCGT+TGG | 0.498954 | 4.4:-7385530 | MS.gene49756:intron |
| ACCTGTATATAGTCCACTGC+TGG | 0.504813 | 4.4:+7386582 | None:intergenic |
| TCATTGGAAATGCAACTGAC+TGG | 0.506344 | 4.4:-7385817 | MS.gene49756:CDS |
| TGCGTCAATGGGTGTCAAGA+TGG | 0.506908 | 4.4:-7386772 | MS.gene49756:CDS |
| CTTCTTCTGCTGCCACCAGA+TGG | 0.509439 | 4.4:+7385716 | None:intergenic |
| GTATGCATAGGCAACCTTGT+TGG | 0.515233 | 4.4:-7385788 | MS.gene49756:CDS |
| ACAAACTTACAATGTGATCA+TGG | 0.515711 | 4.4:+7385657 | None:intergenic |
| ACTGTGTAATTCAGTTTGAA+AGG | 0.517352 | 4.4:+7386747 | None:intergenic |
| AACTAAACAAATTACTTCGC+AGG | 0.517999 | 4.4:-7388392 | MS.gene49756:CDS |
| CCTGTTGGCACTACTATGAC+TGG | 0.521941 | 4.4:+7385761 | None:intergenic |
| CATACAGGCACAACGAGCAC+GGG | 0.522092 | 4.4:-7385885 | MS.gene49756:intron |
| GTGAGGAAGGATATGCGAGA+AGG | 0.530767 | 4.4:+7389727 | None:intergenic |
| TTAGATTGACGAGATTGCTA+AGG | 0.531406 | 4.4:-7388767 | MS.gene49756:intron |
| TAACCTTTATAGGATAAGCT+TGG | 0.532243 | 4.4:-7387112 | MS.gene49756:intron |
| GCGATAGGTTCAGAAACAGC+TGG | 0.533367 | 4.4:-7387316 | MS.gene49756:CDS |
| CTATAGATGCTTACCACCCA+GGG | 0.535077 | 4.4:-7385417 | MS.gene49756:CDS |
| AATGAGCATATCAGAAAGCT+TGG | 0.537743 | 4.4:-7387215 | MS.gene49756:intron |
| CTGCTGGAACTAAGCGGGCA+CGG | 0.538133 | 4.4:+7386598 | None:intergenic |
| AATATCTCTGATCTACCATC+TGG | 0.539127 | 4.4:-7385731 | MS.gene49756:CDS |
| AACAACCTAGATAGACTCCT+TGG | 0.539798 | 4.4:+7388140 | None:intergenic |
| CCTTGAGCAACTGGGTGAAA+CGG | 0.543738 | 4.4:-7385386 | MS.gene49756:CDS |
| GAAGAACAAAGTGGTGAGGA+AGG | 0.544988 | 4.4:+7389714 | None:intergenic |
| CAATCCGCACTGAAAACTAA+AGG | 0.546483 | 4.4:+7388661 | None:intergenic |
| GCGGGCACGGTGTAGTTCAG+TGG | 0.548100 | 4.4:+7386611 | None:intergenic |
| TAATAGGCGGCCGCTGTATG+TGG | 0.551335 | 4.4:+7385479 | None:intergenic |
| CTGCTGAGGTACTTGCTGCA+GGG | 0.553691 | 4.4:+7387530 | None:intergenic |
| TCTATAGATGCTTACCACCC+AGG | 0.553920 | 4.4:-7385418 | MS.gene49756:CDS |
| CATTGGAAATGCAACTGACT+GGG | 0.557301 | 4.4:-7385816 | MS.gene49756:CDS |
| CCTGCAGCAAGTACCTCAGC+AGG | 0.559110 | 4.4:-7387529 | MS.gene49756:intron |
| GCATCTATAGATGCATCATC+CGG | 0.560420 | 4.4:+7385430 | None:intergenic |
| TGGTCCGAATGATAAGATAC+CGG | 0.560910 | 4.4:-7385449 | MS.gene49756:CDS |
| GCACTGAAAACTAAAGGTGA+TGG | 0.561148 | 4.4:+7388667 | None:intergenic |
| GTTGGCATCAAGTAAACCTA+AGG | 0.563829 | 4.4:+7388876 | None:intergenic |
| CGACCAACAGTACCAAAAGT+TGG | 0.564707 | 4.4:+7387247 | None:intergenic |
| CGGGCACGGTGTAGTTCAGT+GGG | 0.565602 | 4.4:+7386612 | None:intergenic |
| CCGTTTCACCCAGTTGCTCA+AGG | 0.565634 | 4.4:+7385386 | None:intergenic |
| TTAGTAATGTCAACCAGGAA+CGG | 0.565845 | 4.4:+7386989 | None:intergenic |
| TCAGTTGCGGATCTACAGAA+AGG | 0.566963 | 4.4:+7387088 | None:intergenic |
| AAAATTCCTCAATATTCCAT+GGG | 0.567370 | 4.4:+7387572 | None:intergenic |
| GGAATGGTTCCATTTGCGAT+AGG | 0.568596 | 4.4:-7387331 | MS.gene49756:CDS |
| TACAATGTGATCATGGTTAG+GGG | 0.570554 | 4.4:+7385664 | None:intergenic |
| TAGATTGACGAGATTGCTAA+GGG | 0.573146 | 4.4:-7388766 | MS.gene49756:CDS |
| GAGATATTAGTAAATCCTGT+TGG | 0.573168 | 4.4:+7385746 | None:intergenic |
| GAGGCAGAACCAGGAACCCA+TGG | 0.574434 | 4.4:-7387588 | MS.gene49756:CDS |
| AAGTTATTGACATGGAAGCT+TGG | 0.574781 | 4.4:-7387781 | MS.gene49756:CDS |
| GCATACAGGCACAACGAGCA+CGG | 0.575352 | 4.4:-7385886 | MS.gene49756:intron |
| CAGGAACCCATGGAATATTG+AGG | 0.577153 | 4.4:-7387578 | MS.gene49756:CDS |
| ACAAGTAGAATTACCATGAT+CGG | 0.577662 | 4.4:+7389678 | None:intergenic |
| CAGTTGCGGATCTACAGAAA+GGG | 0.578399 | 4.4:+7387089 | None:intergenic |
| GTCCACTGCTGGAACTAAGC+GGG | 0.581518 | 4.4:+7386593 | None:intergenic |
| TCTGAACCGACACGTGGCAG+AGG | 0.581655 | 4.4:-7389813 | MS.gene49756:CDS |
| AGGCACAACGAGCACGGGGA+AGG | 0.582434 | 4.4:-7385880 | MS.gene49756:CDS |
| GTAGAATTACCATGATCGGT+TGG | 0.583196 | 4.4:+7389682 | None:intergenic |
| TGCCCGCTTAGTTCCAGCAG+TGG | 0.587159 | 4.4:-7386595 | MS.gene49756:CDS |
| AGCTTACACAAATATTCTTG+CGG | 0.595183 | 4.4:-7388369 | MS.gene49756:CDS |
| GAACCGACACGTGGCAGAGG+TGG | 0.595634 | 4.4:-7389810 | MS.gene49756:CDS |
| AGAAGAACCACCATCACCAC+CGG | 0.596076 | 4.4:-7385698 | MS.gene49756:CDS |
| TCTTGATGATGCCGAGATGG+AGG | 0.598342 | 4.4:-7386951 | MS.gene49756:intron |
| TTGTAGCTTCTAAGAATGGA+GGG | 0.601229 | 4.4:-7388699 | MS.gene49756:CDS |
| CTTGTAGCTTCTAAGAATGG+AGG | 0.602574 | 4.4:-7388700 | MS.gene49756:CDS |
| GCTGATGAATTGCTTAGCCA+AGG | 0.603099 | 4.4:-7388157 | MS.gene49756:CDS |
| CCTAAGGAACATCTTAGGCA+GGG | 0.603224 | 4.4:+7388892 | None:intergenic |
| ATCTCTGATCTACCATCTGG+TGG | 0.603930 | 4.4:-7385728 | MS.gene49756:CDS |
| TGCCAGAATACAAAACAACA+TGG | 0.604012 | 4.4:-7387826 | MS.gene49756:CDS |
| ACTTGCTGCAGGGCCAGCAG+AGG | 0.610001 | 4.4:+7387540 | None:intergenic |
| AGGTATATTAAATTTCACAA+TGG | 0.611101 | 4.4:-7386712 | MS.gene49756:CDS |
| TGCTGGCTCACTTTGATCAG+TGG | 0.611485 | 4.4:-7386680 | MS.gene49756:CDS |
| GCCAGAATACAAAACAACAT+GGG | 0.614131 | 4.4:-7387825 | MS.gene49756:CDS |
| TCAACAGGTTGAAATCTGCA+GGG | 0.616666 | 4.4:-7387669 | MS.gene49756:intron |
| CAGCCGACAAACCTCCATCT+CGG | 0.617061 | 4.4:+7386940 | None:intergenic |
| ATTTCCAATGAATGCATCCA+CGG | 0.620639 | 4.4:+7385829 | None:intergenic |
| GTTGGAAGAACAAAGTGGTG+AGG | 0.621389 | 4.4:+7389710 | None:intergenic |
| TGATCAGTGGCAGCGATCAG+GGG | 0.622019 | 4.4:-7386667 | MS.gene49756:CDS |
| CTATGACTGGTAAACCAACA+AGG | 0.623059 | 4.4:+7385774 | None:intergenic |
| ATATCTTGATGATGCCGAGA+TGG | 0.625613 | 4.4:-7386954 | MS.gene49756:CDS |
| CCACCACCTCTGCCACGTGT+CGG | 0.626864 | 4.4:+7389807 | None:intergenic |
| ATAAATGCCGGTGGTGATGG+TGG | 0.632691 | 4.4:+7385691 | None:intergenic |
| CCATAAGGAATCCCATGAAG+AGG | 0.635203 | 4.4:+7387869 | None:intergenic |
| GAGGAAGGATATGCGAGAAG+GGG | 0.635335 | 4.4:+7389729 | None:intergenic |
| CCAGGAACGGGTCATCAATG+AGG | 0.635918 | 4.4:+7387002 | None:intergenic |
| AACAACAGCACAATCAGTTG+CGG | 0.636172 | 4.4:+7387075 | None:intergenic |
| TGTATGAAGCCCAAGATCAG+TGG | 0.644206 | 4.4:-7386635 | MS.gene49756:CDS |
| TCAACTTAGTAATGTCAACC+AGG | 0.651939 | 4.4:+7386984 | None:intergenic |
| ACTTACCCTGCAGCTCGATG+CGG | 0.661226 | 4.4:-7387286 | MS.gene49756:CDS |
| CAACAGGTTGAAATCTGCAG+GGG | 0.661659 | 4.4:-7387668 | MS.gene49756:intron |
| TCAGTGGCAGCGATCAGGGG+AGG | 0.663073 | 4.4:-7386664 | MS.gene49756:CDS |
| CCAGAATACAAAACAACATG+GGG | 0.665616 | 4.4:-7387824 | MS.gene49756:CDS |
| ATATGCGAGAAGGGGAACAA+CGG | 0.666354 | 4.4:+7389737 | None:intergenic |
| ACAATGTGATCATGGTTAGG+GGG | 0.666722 | 4.4:+7385665 | None:intergenic |
| GACTGGGAGAAAGTATGCAT+AGG | 0.666730 | 4.4:-7385800 | MS.gene49756:CDS |
| TAACACCGCATCGAGCTGCA+GGG | 0.681888 | 4.4:+7387281 | None:intergenic |
| TAATTGAAGAGTACCTGCTG+AGG | 0.688194 | 4.4:+7387516 | None:intergenic |
| AGTCCACTGCTGGAACTAAG+CGG | 0.695324 | 4.4:+7386592 | None:intergenic |
| GCAGTTTCTGAACCGACACG+TGG | 0.699421 | 4.4:-7389819 | MS.gene49756:CDS |
| ATACAGGCACAACGAGCACG+GGG | 0.699547 | 4.4:-7385884 | MS.gene49756:intron |
| GTTGTTCTGGATATTGTTCG+GGG | 0.705893 | 4.4:-7387058 | MS.gene49756:CDS |
| TTACTAATCACCACATACAG+CGG | 0.709492 | 4.4:-7385489 | MS.gene49756:CDS |
| GGACCAAAATCATTAATAGG+CGG | 0.713080 | 4.4:+7385466 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATTAATTCATTAATTTA+TGG | + | chr4.4:7385604-7385623 | None:intergenic | 10.0% |
| !!! | TACAATTAAAATCAATTTTT+CGG | + | chr4.4:7386705-7386724 | None:intergenic | 10.0% |
| !! | CTAAAGATAAAATAAACTAA+TGG | + | chr4.4:7389277-7389296 | None:intergenic | 15.0% |
| !!! | CAATTGTATATTAATTTTGA+TGG | - | chr4.4:7389162-7389181 | MS.gene49756:intron | 15.0% |
| !!! | GGTTTAATTTAACTATTTAA+TGG | + | chr4.4:7388672-7388691 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTAATAGAGGAA+AGG | + | chr4.4:7385814-7385833 | None:intergenic | 15.0% |
| !! | AAAAAATGGAAATGACTATA+TGG | + | chr4.4:7388356-7388375 | None:intergenic | 20.0% |
| !! | AAATAAACCATATAACAGAA+AGG | + | chr4.4:7387768-7387787 | None:intergenic | 20.0% |
| !! | AGGTATATTAAATTTCACAA+TGG | - | chr4.4:7388503-7388522 | MS.gene49756:intron | 20.0% |
| !! | ATACAAGATGAATAGAAATT+AGG | - | chr4.4:7387140-7387159 | MS.gene49756:intron | 20.0% |
| !! | CATGTCTTTACAATAAAAAT+TGG | + | chr4.4:7388302-7388321 | None:intergenic | 20.0% |
| !! | GGAGTAAATATTTCAAAAAT+TGG | + | chr4.4:7386908-7386927 | None:intergenic | 20.0% |
| !! | TAAAAATCAAGTTATTGACA+TGG | - | chr4.4:7387426-7387445 | MS.gene49756:intron | 20.0% |
| !! | TTACTATAAAAAAGATGAGA+TGG | + | chr4.4:7388693-7388712 | None:intergenic | 20.0% |
| !! | TTAGAATCGTAAAAAGAATA+TGG | - | chr4.4:7385689-7385708 | MS.gene49756:CDS | 20.0% |
| !!! | AAATTTTGGTTTTCATTGAA+GGG | - | chr4.4:7387323-7387342 | MS.gene49756:CDS | 20.0% |
| !!! | AAGGAAACAAACAAAATTTT+AGG | + | chr4.4:7387813-7387832 | None:intergenic | 20.0% |
| !!! | AATAAAACACATGTTGATTT+AGG | - | chr4.4:7389039-7389058 | MS.gene49756:intron | 20.0% |
| !!! | ACAATTTTAAGTTTTTCCAA+AGG | + | chr4.4:7388051-7388070 | None:intergenic | 20.0% |
| !!! | ATGTTTATGTCATCTTTTAT+CGG | + | chr4.4:7386031-7386050 | None:intergenic | 20.0% |
| !!! | GATGTAATTATTTTATCATG+AGG | - | chr4.4:7386728-7386747 | MS.gene49756:CDS | 20.0% |
| !!! | GCTGATATTTTTTTTAATAG+AGG | + | chr4.4:7385819-7385838 | None:intergenic | 20.0% |
| !!! | TAAATTTTGGTTTTCATTGA+AGG | - | chr4.4:7387322-7387341 | MS.gene49756:CDS | 20.0% |
| !!! | TATGCTTCTAAATTTTTACT+AGG | - | chr4.4:7389598-7389617 | MS.gene49756:intron | 20.0% |
| !!! | TCTTTTAAATAGTACTTTTG+CGG | - | chr4.4:7387200-7387219 | MS.gene49756:intron | 20.0% |
| !!! | TTGATTTTGTTTATTGTGAT+AGG | - | chr4.4:7387863-7387882 | MS.gene49756:CDS | 20.0% |
| !!! | TTTTATAGTAAGACAATTTG+CGG | - | chr4.4:7388702-7388721 | MS.gene49756:CDS | 20.0% |
| ! | AAAATTCCTCAATATTCCAT+GGG | + | chr4.4:7387646-7387665 | None:intergenic | 25.0% |
| ! | AACCTGGTTAAAAACAAATA+GGG | + | chr4.4:7386780-7386799 | None:intergenic | 25.0% |
| ! | ACTATATCCAAATCTAACAT+AGG | + | chr4.4:7385856-7385875 | None:intergenic | 25.0% |
| ! | ACTGCTACATAAATTACTTT+GGG | + | chr4.4:7388785-7388804 | None:intergenic | 25.0% |
| ! | AGATTTGAATTATTGCATAC+AGG | - | chr4.4:7389315-7389334 | MS.gene49756:intron | 25.0% |
| ! | ATGAAAATAACGAGCTATAT+AGG | + | chr4.4:7386226-7386245 | None:intergenic | 25.0% |
| ! | CTATATCCAAATCTAACATA+GGG | + | chr4.4:7385855-7385874 | None:intergenic | 25.0% |
| ! | GTTCATATATCCTTCTATTT+CGG | - | chr4.4:7386610-7386629 | MS.gene49756:CDS | 25.0% |
| ! | TCCTAACAACATTCAAAAAA+TGG | + | chr4.4:7388370-7388389 | None:intergenic | 25.0% |
| ! | TCTTAATTAACTTTATCTCC+TGG | - | chr4.4:7386956-7386975 | MS.gene49756:CDS | 25.0% |
| ! | TGTAACTAATTCAATAACAG+AGG | - | chr4.4:7385883-7385902 | MS.gene49756:intron | 25.0% |
| ! | TTTGTTTATTGTGATAGGAA+TGG | - | chr4.4:7387868-7387887 | MS.gene49756:CDS | 25.0% |
| !! | AATATTGAGGAATTTTCTAC+GGG | - | chr4.4:7387650-7387669 | MS.gene49756:CDS | 25.0% |
| !! | ATAGAACTAGATGAGATTTT+AGG | - | chr4.4:7388735-7388754 | MS.gene49756:CDS | 25.0% |
| !! | GAATATTGAGGAATTTTCTA+CGG | - | chr4.4:7387649-7387668 | MS.gene49756:CDS | 25.0% |
| !! | GCAAAATCAATTTTCAGATA+AGG | - | chr4.4:7386289-7386308 | MS.gene49756:intron | 25.0% |
| !!! | AATTTCGATTTTGATGACTT+GGG | - | chr4.4:7386382-7386401 | MS.gene49756:intron | 25.0% |
| !!! | CATGTGTTTTATTCTTTTTG+CGG | + | chr4.4:7389032-7389051 | None:intergenic | 25.0% |
| !!! | TAATTTCGATTTTGATGACT+TGG | - | chr4.4:7386381-7386400 | MS.gene49756:intron | 25.0% |
| !!! | TCCATTTTTTGAATGTTGTT+AGG | - | chr4.4:7388366-7388385 | MS.gene49756:CDS | 25.0% |
| !!! | TCTCTATTGGCTTTTATAAT+TGG | + | chr4.4:7386494-7386513 | None:intergenic | 25.0% |
| !!! | TGGTTTATTTTACGATTTAC+TGG | - | chr4.4:7387778-7387797 | MS.gene49756:CDS | 25.0% |
| !!! | TTCCTATTTGTTATCAATCA+GGG | - | chr4.4:7386257-7386276 | MS.gene49756:intron | 25.0% |
| !!! | TTTCCTATTTGTTATCAATC+AGG | - | chr4.4:7386256-7386275 | MS.gene49756:intron | 25.0% |
| AAATTACCATGTTCTACCTT+TGG | - | chr4.4:7388032-7388051 | MS.gene49756:intron | 30.0% | |
| AACTAAACAAATTACTTCGC+AGG | - | chr4.4:7386823-7386842 | MS.gene49756:intron | 30.0% | |
| ACAAACTTACAATGTGATCA+TGG | + | chr4.4:7389561-7389580 | None:intergenic | 30.0% | |
| ACAAGTAGAATTACCATGAT+CGG | + | chr4.4:7385540-7385559 | None:intergenic | 30.0% | |
| ACTAAACCCTATGTTAGATT+TGG | - | chr4.4:7385846-7385865 | MS.gene49756:CDS | 30.0% | |
| ACTGTGTAATTCAGTTTGAA+AGG | + | chr4.4:7388471-7388490 | None:intergenic | 30.0% | |
| AGCTTACACAAATATTCTTG+CGG | - | chr4.4:7386846-7386865 | MS.gene49756:intron | 30.0% | |
| AGTAACTTATACAGAAGAAC+TGG | - | chr4.4:7387015-7387034 | MS.gene49756:CDS | 30.0% | |
| ATTATGTCCTTCAATCCATA+AGG | + | chr4.4:7387364-7387383 | None:intergenic | 30.0% | |
| CACTGCTACATAAATTACTT+TGG | + | chr4.4:7388786-7388805 | None:intergenic | 30.0% | |
| GAAAATTCCTCAATATTCCA+TGG | + | chr4.4:7387647-7387666 | None:intergenic | 30.0% | |
| GAACCTGGTTAAAAACAAAT+AGG | + | chr4.4:7386781-7386800 | None:intergenic | 30.0% | |
| GAGATATTAGTAAATCCTGT+TGG | + | chr4.4:7389472-7389491 | None:intergenic | 30.0% | |
| GGAAATGACTATATGGAATT+TGG | + | chr4.4:7388349-7388368 | None:intergenic | 30.0% | |
| GGAGAATGAAAAAGTAGTAT+CGG | - | chr4.4:7386867-7386886 | MS.gene49756:intron | 30.0% | |
| GTAAGTTGTGTAACCTTTAT+AGG | - | chr4.4:7388093-7388112 | MS.gene49756:intron | 30.0% | |
| GTTTGTTTCCTTTATATGTG+AGG | - | chr4.4:7387821-7387840 | MS.gene49756:CDS | 30.0% | |
| TAACCTTTATAGGATAAGCT+TGG | - | chr4.4:7388103-7388122 | MS.gene49756:intron | 30.0% | |
| TGTTCATAACTTTACACTCT+AGG | + | chr4.4:7387108-7387127 | None:intergenic | 30.0% | |
| TTACAATGTGATCATGGTTA+GGG | + | chr4.4:7389555-7389574 | None:intergenic | 30.0% | |
| TTCGGACCAAAATCATTAAT+AGG | + | chr4.4:7389755-7389774 | None:intergenic | 30.0% | |
| TTCTATTCATCTTGTATAGC+AGG | + | chr4.4:7387137-7387156 | None:intergenic | 30.0% | |
| TTGTTTGAGTGAATTACCAA+AGG | - | chr4.4:7385781-7385800 | MS.gene49756:CDS | 30.0% | |
| ! | AATGAGGATATCTTTTGATG+AGG | + | chr4.4:7388200-7388219 | None:intergenic | 30.0% |
| ! | AGAAGGATATATGAACCTTT+TGG | + | chr4.4:7386606-7386625 | None:intergenic | 30.0% |
| ! | ATGAGGATATCTTTTGATGA+GGG | + | chr4.4:7388199-7388218 | None:intergenic | 30.0% |
| ! | ATGAGGTACTATTTCATGAT+TGG | - | chr4.4:7386745-7386764 | MS.gene49756:CDS | 30.0% |
| ! | TTCCCTGATTGATAACAAAT+AGG | + | chr4.4:7386262-7386281 | None:intergenic | 30.0% |
| ! | TTTTTCTATCTGTGCTTCAT+AGG | - | chr4.4:7388919-7388938 | MS.gene49756:CDS | 30.0% |
| ! | TTTTTGTTGGAAGAACAAAG+TGG | + | chr4.4:7385513-7385532 | None:intergenic | 30.0% |
| !! | GTTGTTTTCATTAGCTATCT+TGG | + | chr4.4:7386081-7386100 | None:intergenic | 30.0% |
| !! | TATTGATGATGTTGTTCAAC+AGG | - | chr4.4:7387531-7387550 | MS.gene49756:CDS | 30.0% |
| !!! | CTTTTGTTTCTGTCTTTTAG+AGG | - | chr4.4:7387741-7387760 | MS.gene49756:intron | 30.0% |
| !!! | TTCCCTATTTGTTTTTAACC+AGG | - | chr4.4:7386775-7386794 | MS.gene49756:CDS | 30.0% |
| AACCTGTTGTACATTTGTCA+GGG | + | chr4.4:7385671-7385690 | None:intergenic | 35.0% | |
| AAGTTATTGACATGGAAGCT+TGG | - | chr4.4:7387434-7387453 | MS.gene49756:intron | 35.0% | |
| AATATCTCTGATCTACCATC+TGG | - | chr4.4:7389484-7389503 | MS.gene49756:intron | 35.0% | |
| AATGAGCATATCAGAAAGCT+TGG | - | chr4.4:7388000-7388019 | MS.gene49756:intron | 35.0% | |
| ACTAACTAACCTGCAATTTG+CGG | + | chr4.4:7385726-7385745 | None:intergenic | 35.0% | |
| AGAAGCTACAAGTTCTCTAT+TGG | + | chr4.4:7386507-7386526 | None:intergenic | 35.0% | |
| ATCCTTCTATTTCGGAGATA+CGG | - | chr4.4:7386618-7386637 | MS.gene49756:CDS | 35.0% | |
| ATTTCCAATGAATGCATCCA+CGG | + | chr4.4:7389389-7389408 | None:intergenic | 35.0% | |
| CATATACAGTACATCCCAAA+AGG | + | chr4.4:7387271-7387290 | None:intergenic | 35.0% | |
| CCAGAATACAAAACAACATG+GGG | - | chr4.4:7387391-7387410 | MS.gene49756:intron | 35.0% | |
| CTTACAATGTGATCATGGTT+AGG | + | chr4.4:7389556-7389575 | None:intergenic | 35.0% | |
| GATGTGATGAACTGTAATGT+TGG | - | chr4.4:7385925-7385944 | MS.gene49756:intron | 35.0% | |
| GCAATATCTTCTTCAGATTC+TGG | + | chr4.4:7386647-7386666 | None:intergenic | 35.0% | |
| GCCAGAATACAAAACAACAT+GGG | - | chr4.4:7387390-7387409 | MS.gene49756:intron | 35.0% | |
| GGACCAAAATCATTAATAGG+CGG | + | chr4.4:7389752-7389771 | None:intergenic | 35.0% | |
| GTAAACCTAAGGAACATCTT+AGG | + | chr4.4:7386331-7386350 | None:intergenic | 35.0% | |
| GTTACTACAGCTTCAAGAAT+AGG | + | chr4.4:7387001-7387020 | None:intergenic | 35.0% | |
| TAACCTGTTGTACATTTGTC+AGG | + | chr4.4:7385672-7385691 | None:intergenic | 35.0% | |
| TACAATGTGATCATGGTTAG+GGG | + | chr4.4:7389554-7389573 | None:intergenic | 35.0% | |
| TAGAGGTCCTTTCTGTTATA+TGG | - | chr4.4:7387758-7387777 | MS.gene49756:intron | 35.0% | |
| TAGATTGACGAGATTGCTAA+GGG | - | chr4.4:7386449-7386468 | MS.gene49756:intron | 35.0% | |
| TCAACTTAGTAATGTCAACC+AGG | + | chr4.4:7388234-7388253 | None:intergenic | 35.0% | |
| TCAAGTTCTTTAGCCAAACA+TGG | - | chr4.4:7386181-7386200 | MS.gene49756:intron | 35.0% | |
| TCATCCGGTATCTTATCATT+CGG | + | chr4.4:7389773-7389792 | None:intergenic | 35.0% | |
| TGACTGTTACTCTTGAACTT+GGG | + | chr4.4:7385959-7385978 | None:intergenic | 35.0% | |
| TGCAAAATTTGAGCCATGTT+TGG | + | chr4.4:7386197-7386216 | None:intergenic | 35.0% | |
| TGCCAGAATACAAAACAACA+TGG | - | chr4.4:7387389-7387408 | MS.gene49756:intron | 35.0% | |
| TGGAAGCTTGGATCTATAAA+AGG | - | chr4.4:7387446-7387465 | MS.gene49756:intron | 35.0% | |
| TGGTAATTCACTCAAACAAG+TGG | + | chr4.4:7385780-7385799 | None:intergenic | 35.0% | |
| TTACTAATCACCACATACAG+CGG | - | chr4.4:7389726-7389745 | MS.gene49756:CDS | 35.0% | |
| TTAGATTGACGAGATTGCTA+AGG | - | chr4.4:7386448-7386467 | MS.gene49756:intron | 35.0% | |
| TTAGTAATGTCAACCAGGAA+CGG | + | chr4.4:7388229-7388248 | None:intergenic | 35.0% | |
| TTCAAGAATAGGATTGTACC+TGG | + | chr4.4:7386990-7387009 | None:intergenic | 35.0% | |
| TTTAACCAGGTTCTTGAGTT+AGG | - | chr4.4:7386788-7386807 | MS.gene49756:CDS | 35.0% | |
| ! | AAACAAAAGTGCAAGCGTTT+AGG | + | chr4.4:7387730-7387749 | None:intergenic | 35.0% |
| ! | AATAAGAGAGTCTTTTACCG+TGG | - | chr4.4:7389369-7389388 | MS.gene49756:intron | 35.0% |
| ! | ATGTCATCTTTTATCGGATG+TGG | + | chr4.4:7386025-7386044 | None:intergenic | 35.0% |
| ! | CAGGTTAGTTAGTTAGTTAG+TGG | - | chr4.4:7385733-7385752 | MS.gene49756:CDS | 35.0% |
| ! | CTGTTGTTCTGGATATTGTT+CGG | - | chr4.4:7388155-7388174 | MS.gene49756:CDS | 35.0% |
| ! | CTTATTGCAAAGCTTGTTTC+TGG | - | chr4.4:7387575-7387594 | MS.gene49756:CDS | 35.0% |
| ! | GAACTTGTAGCTTCTAAGAA+TGG | - | chr4.4:7386512-7386531 | MS.gene49756:intron | 35.0% |
| ! | GACATTACTAAGTTGACTGT+TGG | - | chr4.4:7388238-7388257 | MS.gene49756:intron | 35.0% |
| ! | GATGAACTGTAATGTTGGTT+TGG | - | chr4.4:7385930-7385949 | MS.gene49756:intron | 35.0% |
| ! | GTTTTTCCAAAGGTAGAACA+TGG | + | chr4.4:7388041-7388060 | None:intergenic | 35.0% |
| ! | TACACAGTTGATTCTGTTCA+AGG | - | chr4.4:7388483-7388502 | MS.gene49756:intron | 35.0% |
| ! | TGTTGTTCTGGATATTGTTC+GGG | - | chr4.4:7388156-7388175 | MS.gene49756:CDS | 35.0% |
| ! | TTGTAGCTTCTAAGAATGGA+GGG | - | chr4.4:7386516-7386535 | MS.gene49756:intron | 35.0% |
| !! | AAAGCTTGTTTCTGGATCAT+TGG | - | chr4.4:7387583-7387602 | MS.gene49756:CDS | 35.0% |
| !!! | ATCACCTTTAGTTTTCAGTG+CGG | - | chr4.4:7386550-7386569 | MS.gene49756:intron | 35.0% |
| !!! | TTTAGTTTTCAGTGCGGATT+GGG | - | chr4.4:7386556-7386575 | MS.gene49756:intron | 35.0% |
| AAAGTGCAAGCGTTTAGGAA+GGG | + | chr4.4:7387725-7387744 | None:intergenic | 40.0% | |
| AACAACAGCACAATCAGTTG+CGG | + | chr4.4:7388143-7388162 | None:intergenic | 40.0% | |
| AACAACCTAGATAGACTCCT+TGG | + | chr4.4:7387078-7387097 | None:intergenic | 40.0% | |
| AATATTCTGCCGCAAATTGC+AGG | - | chr4.4:7385714-7385733 | MS.gene49756:CDS | 40.0% | |
| AATGGTTGGGAACATACATG+CGG | - | chr4.4:7388988-7389007 | MS.gene49756:intron | 40.0% | |
| ACAATGTGATCATGGTTAGG+GGG | + | chr4.4:7389553-7389572 | None:intergenic | 40.0% | |
| ACACAGGACACATTAATCTG+AGG | + | chr4.4:7388812-7388831 | None:intergenic | 40.0% | |
| ACCTGTTGTACATTTGTCAG+GGG | + | chr4.4:7385670-7385689 | None:intergenic | 40.0% | |
| ACTTGATGCCAACTTCTTCA+AGG | - | chr4.4:7386349-7386368 | MS.gene49756:intron | 40.0% | |
| AGCAATCTCGTCAATCTAAG+AGG | + | chr4.4:7386447-7386466 | None:intergenic | 40.0% | |
| CAACAAAAACCAACCGATCA+TGG | - | chr4.4:7385524-7385543 | MS.gene49756:intron | 40.0% | |
| CAACTTCTTCAAGGATGATC+AGG | - | chr4.4:7386358-7386377 | MS.gene49756:intron | 40.0% | |
| CAATCCGCACTGAAAACTAA+AGG | + | chr4.4:7386557-7386576 | None:intergenic | 40.0% | |
| CACAATGGATGTTGATATGC+TGG | - | chr4.4:7388518-7388537 | MS.gene49756:intron | 40.0% | |
| CAGATTAATGTGTCCTGTGT+CGG | - | chr4.4:7388812-7388831 | MS.gene49756:intron | 40.0% | |
| CATTGGAAATGCAACTGACT+GGG | - | chr4.4:7389399-7389418 | MS.gene49756:intron | 40.0% | |
| CTATGACTGGTAAACCAACA+AGG | + | chr4.4:7389444-7389463 | None:intergenic | 40.0% | |
| CTGACTGTTACTCTTGAACT+TGG | + | chr4.4:7385960-7385979 | None:intergenic | 40.0% | |
| CTGATCATCCTTGAAGAAGT+TGG | + | chr4.4:7386360-7386379 | None:intergenic | 40.0% | |
| GACTGTTACTCTTGAACTTG+GGG | + | chr4.4:7385958-7385977 | None:intergenic | 40.0% | |
| GCACTGAAAACTAAAGGTGA+TGG | + | chr4.4:7386551-7386570 | None:intergenic | 40.0% | |
| GCATCTATAGATGCATCATC+CGG | + | chr4.4:7389788-7389807 | None:intergenic | 40.0% | |
| GGTTCAGAAACTGCATTTAC+AGG | + | chr4.4:7385390-7385409 | None:intergenic | 40.0% | |
| GTAGAATTACCATGATCGGT+TGG | + | chr4.4:7385536-7385555 | None:intergenic | 40.0% | |
| GTTGATGTTCTTGCGTCAAT+GGG | - | chr4.4:7388432-7388451 | MS.gene49756:intron | 40.0% | |
| GTTGGCATCAAGTAAACCTA+AGG | + | chr4.4:7386342-7386361 | None:intergenic | 40.0% | |
| GTTTCTGAACCTATCGCAAA+TGG | + | chr4.4:7387896-7387915 | None:intergenic | 40.0% | |
| TAGTAATGTCAACCAGGAAC+GGG | + | chr4.4:7388228-7388247 | None:intergenic | 40.0% | |
| TATTTCCCCTGTTTATCTGC+AGG | - | chr4.4:7389673-7389692 | MS.gene49756:intron | 40.0% | |
| TCAGAAACCTGAAAACTCTG+AGG | + | chr4.4:7389100-7389119 | None:intergenic | 40.0% | |
| TCATTGGAAATGCAACTGAC+TGG | - | chr4.4:7389398-7389417 | MS.gene49756:intron | 40.0% | |
| TGGACAGTAAGAAACAGAGT+TGG | + | chr4.4:7385584-7385603 | None:intergenic | 40.0% | |
| TGGTCCGAATGATAAGATAC+CGG | - | chr4.4:7389766-7389785 | MS.gene49756:CDS | 40.0% | |
| TGTTGATGTTCTTGCGTCAA+TGG | - | chr4.4:7388431-7388450 | MS.gene49756:intron | 40.0% | |
| TTGACACTTGCAGAAAGATC+AGG | - | chr4.4:7389217-7389236 | MS.gene49756:intron | 40.0% | |
| TTTACCGTGGATGCATTCAT+TGG | - | chr4.4:7389382-7389401 | MS.gene49756:intron | 40.0% | |
| TTTATTTGCCATGACAACCC+AGG | - | chr4.4:7388407-7388426 | MS.gene49756:CDS | 40.0% | |
| ! | AAAAGTGCAAGCGTTTAGGA+AGG | + | chr4.4:7387726-7387745 | None:intergenic | 40.0% |
| ! | AACTGATTGTGCTGTTGTTC+TGG | - | chr4.4:7388144-7388163 | MS.gene49756:intron | 40.0% |
| ! | CATAGAACCTCAGAGTTTTC+AGG | - | chr4.4:7389090-7389109 | MS.gene49756:intron | 40.0% |
| ! | CTTGTAGCTTCTAAGAATGG+AGG | - | chr4.4:7386515-7386534 | MS.gene49756:intron | 40.0% |
| ! | GAGTTGTTACAGTTGATGCT+TGG | - | chr4.4:7386404-7386423 | MS.gene49756:intron | 40.0% |
| ! | GCTTATGATGATGTCTGGTT+TGG | - | chr4.4:7387605-7387624 | MS.gene49756:CDS | 40.0% |
| ! | GTTGTTCTGGATATTGTTCG+GGG | - | chr4.4:7388157-7388176 | MS.gene49756:CDS | 40.0% |
| ! | TCAACAGGTTGAAATCTGCA+GGG | - | chr4.4:7387546-7387565 | MS.gene49756:CDS | 40.0% |
| ! | TCTTTTGATGAGGGATCTTC+AGG | + | chr4.4:7388190-7388209 | None:intergenic | 40.0% |
| ! | TGGGATTCCTTATGGATTGA+AGG | - | chr4.4:7387354-7387373 | MS.gene49756:intron | 40.0% |
| ! | TTCAACAGGTTGAAATCTGC+AGG | - | chr4.4:7387545-7387564 | MS.gene49756:CDS | 40.0% |
| ! | TTGTTACAGTTGATGCTTGG+TGG | - | chr4.4:7386407-7386426 | MS.gene49756:intron | 40.0% |
| !! | ATATCTTGATGATGCCGAGA+TGG | - | chr4.4:7388261-7388280 | MS.gene49756:intron | 40.0% |
| !! | CATTGGCTTATGATGATGTC+TGG | - | chr4.4:7387600-7387619 | MS.gene49756:CDS | 40.0% |
| !! | CTGAAAACTCTGAGGTTCTA+TGG | + | chr4.4:7389092-7389111 | None:intergenic | 40.0% |
| !! | CTTGTACCAAAAGTACCAGA+GGG | + | chr4.4:7389068-7389087 | None:intergenic | 40.0% |
| !! | TAATTGAAGAGTACCTGCTG+AGG | + | chr4.4:7387702-7387721 | None:intergenic | 40.0% |
| !! | TATGATGATGTCTGGTTTGG+AGG | - | chr4.4:7387608-7387627 | MS.gene49756:CDS | 40.0% |
| !! | TTGTACCAAAAGTACCAGAG+GGG | + | chr4.4:7389067-7389086 | None:intergenic | 40.0% |
| !! | TTTTTGGTCCTTGAGCAACT+GGG | - | chr4.4:7389821-7389840 | MS.gene49756:CDS | 40.0% |
| !!! | CATGATCGGTTGGTTTTTGT+TGG | + | chr4.4:7385526-7385545 | None:intergenic | 40.0% |
| !!! | CCCCATGTTGTTTTGTATTC+TGG | + | chr4.4:7387394-7387413 | None:intergenic | 40.0% |
| !!! | CTTTAGTTTTCAGTGCGGAT+TGG | - | chr4.4:7386555-7386574 | MS.gene49756:intron | 40.0% |
| ACATCCCAAAAGGATGCAGA+AGG | + | chr4.4:7387261-7387280 | None:intergenic | 45.0% | |
| ACCCCTGACAAATGTACAAC+AGG | - | chr4.4:7385666-7385685 | MS.gene49756:intron | 45.0% | |
| ACCTAAGGAACATCTTAGGC+AGG | + | chr4.4:7386327-7386346 | None:intergenic | 45.0% | |
| ACCTGTATATAGTCCACTGC+TGG | + | chr4.4:7388636-7388655 | None:intergenic | 45.0% | |
| ACGCAAGAACATCAACAACC+TGG | + | chr4.4:7388428-7388447 | None:intergenic | 45.0% | |
| AGTTTCAACACGCACACACA+CGG | + | chr4.4:7386929-7386948 | None:intergenic | 45.0% | |
| ATATGCGAGAAGGGGAACAA+CGG | + | chr4.4:7385481-7385500 | None:intergenic | 45.0% | |
| ATCAACAACCTGGGTTGTCA+TGG | + | chr4.4:7388418-7388437 | None:intergenic | 45.0% | |
| ATCTCTGATCTACCATCTGG+TGG | - | chr4.4:7389487-7389506 | MS.gene49756:intron | 45.0% | |
| CAAAAGGATGCAGAAGGTTG+CGG | + | chr4.4:7387255-7387274 | None:intergenic | 45.0% | |
| CAGGAACCCATGGAATATTG+AGG | - | chr4.4:7387637-7387656 | MS.gene49756:CDS | 45.0% | |
| CAGTTGCGGATCTACAGAAA+GGG | + | chr4.4:7388129-7388148 | None:intergenic | 45.0% | |
| CATGACACTAACATCGAGAC+TGG | + | chr4.4:7388888-7388907 | None:intergenic | 45.0% | |
| CCATAAGGAATCCCATGAAG+AGG | + | chr4.4:7387349-7387368 | None:intergenic | 45.0% | |
| CCTAAGGAACATCTTAGGCA+GGG | + | chr4.4:7386326-7386345 | None:intergenic | 45.0% | |
| CCTCTTCATGGGATTCCTTA+TGG | - | chr4.4:7387346-7387365 | MS.gene49756:intron | 45.0% | |
| CGACCAACAGTACCAAAAGT+TGG | + | chr4.4:7387971-7387990 | None:intergenic | 45.0% | |
| CGCAAGAACATCAACAACCT+GGG | + | chr4.4:7388427-7388446 | None:intergenic | 45.0% | |
| CTATAGATGCTTACCACCCA+GGG | - | chr4.4:7389798-7389817 | MS.gene49756:CDS | 45.0% | |
| CTCAATATTCCATGGGTTCC+TGG | + | chr4.4:7387639-7387658 | None:intergenic | 45.0% | |
| CTCCGTATCTCCGAAATAGA+AGG | + | chr4.4:7386623-7386642 | None:intergenic | 45.0% | |
| CTTAGCCAAGGAGTCTATCT+AGG | - | chr4.4:7387070-7387089 | MS.gene49756:CDS | 45.0% | |
| GAACAGATAGGCTGCTATCT+GGG | + | chr4.4:7388957-7388976 | None:intergenic | 45.0% | |
| GAAGAACAAAGTGGTGAGGA+AGG | + | chr4.4:7385504-7385523 | None:intergenic | 45.0% | |
| GAGGAAAGGACAATAGCCTT+TGG | + | chr4.4:7385800-7385819 | None:intergenic | 45.0% | |
| GCTGATGAATTGCTTAGCCA+AGG | - | chr4.4:7387058-7387077 | MS.gene49756:CDS | 45.0% | |
| GGAATGGTTCCATTTGCGAT+AGG | - | chr4.4:7387884-7387903 | MS.gene49756:intron | 45.0% | |
| GGGCCAAGCTTATCCTATAA+AGG | + | chr4.4:7388109-7388128 | None:intergenic | 45.0% | |
| GTATGCATAGGCAACCTTGT+TGG | - | chr4.4:7389427-7389446 | MS.gene49756:intron | 45.0% | |
| GTTCACCTAACTCAAGAACC+TGG | + | chr4.4:7386796-7386815 | None:intergenic | 45.0% | |
| GTTGGAAGAACAAAGTGGTG+AGG | + | chr4.4:7385508-7385527 | None:intergenic | 45.0% | |
| TACCTCGCATACGAACAGAT+AGG | + | chr4.4:7388969-7388988 | None:intergenic | 45.0% | |
| TACGTGTAAATGTCCGACAC+AGG | + | chr4.4:7388828-7388847 | None:intergenic | 45.0% | |
| TCAGTTGCGGATCTACAGAA+AGG | + | chr4.4:7388130-7388149 | None:intergenic | 45.0% | |
| TCATTGAAGGGCCTCTTCAT+GGG | - | chr4.4:7387335-7387354 | MS.gene49756:intron | 45.0% | |
| TCTATAGATGCTTACCACCC+AGG | - | chr4.4:7389797-7389816 | MS.gene49756:CDS | 45.0% | |
| TCTGTTCGTATGCGAGGTAA+TGG | - | chr4.4:7388970-7388989 | MS.gene49756:intron | 45.0% | |
| TGAGGAAGGATATGCGAGAA+GGG | + | chr4.4:7385490-7385509 | None:intergenic | 45.0% | |
| TGTATGAAGCCCAAGATCAG+TGG | - | chr4.4:7388580-7388599 | MS.gene49756:CDS | 45.0% | |
| TTCATTGAAGGGCCTCTTCA+TGG | - | chr4.4:7387334-7387353 | MS.gene49756:intron | 45.0% | |
| TTGTACATTTGTCAGGGGTG+TGG | + | chr4.4:7385665-7385684 | None:intergenic | 45.0% | |
| TTTGGTACTGTTGGTCGAAC+TGG | - | chr4.4:7387974-7387993 | MS.gene49756:intron | 45.0% | |
| ! | ACTGCATTGCGTCCAACTTT+TGG | - | chr4.4:7387956-7387975 | MS.gene49756:intron | 45.0% |
| ! | CAACAGGTTGAAATCTGCAG+GGG | - | chr4.4:7387547-7387566 | MS.gene49756:CDS | 45.0% |
| ! | CCTCTGGTACTTTTGGTACA+AGG | - | chr4.4:7389066-7389085 | MS.gene49756:intron | 45.0% |
| ! | CGGCCGCCTATTAATGATTT+TGG | - | chr4.4:7389746-7389765 | MS.gene49756:CDS | 45.0% |
| ! | CGTCCAACTTTTGGTACTGT+TGG | - | chr4.4:7387965-7387984 | MS.gene49756:intron | 45.0% |
| ! | GACTGGGAGAAAGTATGCAT+AGG | - | chr4.4:7389415-7389434 | MS.gene49756:intron | 45.0% |
| ! | GCAACCTTCTGCATCCTTTT+GGG | - | chr4.4:7387254-7387273 | MS.gene49756:CDS | 45.0% |
| ! | TCGTATGCGAGGTAATGGTT+GGG | - | chr4.4:7388975-7388994 | MS.gene49756:intron | 45.0% |
| ! | TTCGTATGCGAGGTAATGGT+TGG | - | chr4.4:7388974-7388993 | MS.gene49756:intron | 45.0% |
| !! | CCTTGTACCAAAAGTACCAG+AGG | + | chr4.4:7389069-7389088 | None:intergenic | 45.0% |
| !! | TCCAGCAGTGGACTATATAC+AGG | - | chr4.4:7388632-7388651 | MS.gene49756:CDS | 45.0% |
| !!! | GTTTTTGGTCCTTGAGCAAC+TGG | - | chr4.4:7389820-7389839 | MS.gene49756:CDS | 45.0% |
| !!! | TTTAGTTTTAAAATAAATTT+TGG | - | chr4.4:7387309-7387328 | MS.gene49756:CDS | 5.0% |
| AGAAGAACCACCATCACCAC+CGG | - | chr4.4:7389517-7389536 | MS.gene49756:CDS | 50.0% | |
| AGCATAAATGCCGGTGGTGA+TGG | + | chr4.4:7389530-7389549 | None:intergenic | 50.0% | |
| AGCCTATCTGTTCGTATGCG+AGG | - | chr4.4:7388964-7388983 | MS.gene49756:intron | 50.0% | |
| AGTCCACTGCTGGAACTAAG+CGG | + | chr4.4:7388626-7388645 | None:intergenic | 50.0% | |
| ATGCCGAGATGGAGGTTTGT+CGG | - | chr4.4:7388272-7388291 | MS.gene49756:intron | 50.0% | |
| CACGCACGCCTCACATATAA+AGG | + | chr4.4:7387832-7387851 | None:intergenic | 50.0% | |
| CAGAGCCTGCAGATAAACAG+GGG | + | chr4.4:7389681-7389700 | None:intergenic | 50.0% | |
| CAGTTCACTGCGCAACCAAA+AGG | - | chr4.4:7386588-7386607 | MS.gene49756:CDS | 50.0% | |
| CCAGAGCCTGCAGATAAACA+GGG | + | chr4.4:7389682-7389701 | None:intergenic | 50.0% | |
| CCAGTCATAGTAGTGCCAAC+AGG | - | chr4.4:7389454-7389473 | MS.gene49756:intron | 50.0% | |
| CCCTGCCTAAGATGTTCCTT+AGG | - | chr4.4:7386323-7386342 | MS.gene49756:intron | 50.0% | |
| CCTGTTGGCACTACTATGAC+TGG | + | chr4.4:7389457-7389476 | None:intergenic | 50.0% | |
| CCTTGAGCAACTGGGTGAAA+CGG | - | chr4.4:7389829-7389848 | MS.gene49756:CDS | 50.0% | |
| CGAACAGATAGGCTGCTATC+TGG | + | chr4.4:7388958-7388977 | None:intergenic | 50.0% | |
| GAGGAAGGATATGCGAGAAG+GGG | + | chr4.4:7385489-7385508 | None:intergenic | 50.0% | |
| GCGATAGGTTCAGAAACAGC+TGG | - | chr4.4:7387899-7387918 | MS.gene49756:intron | 50.0% | |
| GCTCAAGGACCAAAAACCCT+GGG | + | chr4.4:7389817-7389836 | None:intergenic | 50.0% | |
| GTGAGGAAGGATATGCGAGA+AGG | + | chr4.4:7385491-7385510 | None:intergenic | 50.0% | |
| TCGAGCTGCAGGGTAAGTTA+TGG | + | chr4.4:7387927-7387946 | None:intergenic | 50.0% | |
| TGCGTCAATGGGTGTCAAGA+TGG | - | chr4.4:7388443-7388462 | MS.gene49756:intron | 50.0% | |
| TGCTCAAGGACCAAAAACCC+TGG | + | chr4.4:7389818-7389837 | None:intergenic | 50.0% | |
| TTCAGTGGGCCACTGATCTT+GGG | + | chr4.4:7388592-7388611 | None:intergenic | 50.0% | |
| TTGATCAGTGGCAGCGATCA+GGG | - | chr4.4:7388547-7388566 | MS.gene49756:intron | 50.0% | |
| TTTGATCAGTGGCAGCGATC+AGG | - | chr4.4:7388546-7388565 | MS.gene49756:intron | 50.0% | |
| ! | CGCAACCTTCTGCATCCTTT+TGG | - | chr4.4:7387253-7387272 | MS.gene49756:CDS | 50.0% |
| ! | GTTAGGGGGAGCATAAATGC+CGG | + | chr4.4:7389539-7389558 | None:intergenic | 50.0% |
| ! | TGCTTACCACCCAGGGTTTT+TGG | - | chr4.4:7389805-7389824 | MS.gene49756:CDS | 50.0% |
| ! | TTTTCTACGGGTTCCTCTGC+TGG | - | chr4.4:7387662-7387681 | MS.gene49756:CDS | 50.0% |
| !! | ATAAATGCCGGTGGTGATGG+TGG | + | chr4.4:7389527-7389546 | None:intergenic | 50.0% |
| !! | CTTTTGGTTGCGCAGTGAAC+TGG | + | chr4.4:7386590-7386609 | None:intergenic | 50.0% |
| !! | TCTTGATGATGCCGAGATGG+AGG | - | chr4.4:7388264-7388283 | MS.gene49756:intron | 50.0% |
| !! | TGCTGGCTCACTTTGATCAG+TGG | - | chr4.4:7388535-7388554 | MS.gene49756:intron | 50.0% |
| !! | TGTTGATTTAGGCTCCCCTC+TGG | - | chr4.4:7389050-7389069 | MS.gene49756:intron | 50.0% |
| ACTTACCCTGCAGCTCGATG+CGG | - | chr4.4:7387929-7387948 | MS.gene49756:intron | 55.0% | |
| ATACAGGCACAACGAGCACG+GGG | - | chr4.4:7389331-7389350 | MS.gene49756:intron | 55.0% | |
| CAAGGACCAAAAACCCTGGG+TGG | + | chr4.4:7389814-7389833 | None:intergenic | 55.0% | |
| CAGCCGACAAACCTCCATCT+CGG | + | chr4.4:7388278-7388297 | None:intergenic | 55.0% | |
| CATACAGGCACAACGAGCAC+GGG | - | chr4.4:7389330-7389349 | MS.gene49756:intron | 55.0% | |
| CCAGGAACGGGTCATCAATG+AGG | + | chr4.4:7388216-7388235 | None:intergenic | 55.0% | |
| CCCTGTTTATCTGCAGGCTC+TGG | - | chr4.4:7389679-7389698 | MS.gene49756:intron | 55.0% | |
| CCGTTTCACCCAGTTGCTCA+AGG | + | chr4.4:7389832-7389851 | None:intergenic | 55.0% | |
| CTTCTTCTGCTGCCACCAGA+TGG | + | chr4.4:7389502-7389521 | None:intergenic | 55.0% | |
| GCAGTTTCTGAACCGACACG+TGG | - | chr4.4:7385396-7385415 | MS.gene49756:CDS | 55.0% | |
| GCATACAGGCACAACGAGCA+CGG | - | chr4.4:7389329-7389348 | MS.gene49756:intron | 55.0% | |
| GCCAGAGCCTGCAGATAAAC+AGG | + | chr4.4:7389683-7389702 | None:intergenic | 55.0% | |
| GTCCACTGCTGGAACTAAGC+GGG | + | chr4.4:7388625-7388644 | None:intergenic | 55.0% | |
| GTTCAGTGGGCCACTGATCT+TGG | + | chr4.4:7388593-7388612 | None:intergenic | 55.0% | |
| TAACACCGCATCGAGCTGCA+GGG | + | chr4.4:7387937-7387956 | None:intergenic | 55.0% | |
| TAATAGGCGGCCGCTGTATG+TGG | + | chr4.4:7389739-7389758 | None:intergenic | 55.0% | |
| TATCTCCTGGAGTGAACGCC+AGG | - | chr4.4:7386969-7386988 | MS.gene49756:CDS | 55.0% | |
| TGATCAGTGGCAGCGATCAG+GGG | - | chr4.4:7388548-7388567 | MS.gene49756:intron | 55.0% | |
| TTGTACCTGGCGTTCACTCC+AGG | + | chr4.4:7386977-7386996 | None:intergenic | 55.0% | |
| ! | AGGCTCCCCTCTGGTACTTT+TGG | - | chr4.4:7389059-7389078 | MS.gene49756:intron | 55.0% |
| ! | CCTCATTGATGACCCGTTCC+TGG | - | chr4.4:7388213-7388232 | MS.gene49756:CDS | 55.0% |
| ! | CTGCTGAGGTACTTGCTGCA+GGG | + | chr4.4:7387688-7387707 | None:intergenic | 55.0% |
| ! | TTATCTGCAGGCTCTGGCGT+TGG | - | chr4.4:7389685-7389704 | MS.gene49756:intron | 55.0% |
| !! | TCTGGTTTGGAGGCAGAACC+AGG | - | chr4.4:7387618-7387637 | MS.gene49756:CDS | 55.0% |
| CCTGCAGCAAGTACCTCAGC+AGG | - | chr4.4:7387686-7387705 | MS.gene49756:intron | 60.0% | |
| CGGGCACGGTGTAGTTCAGT+GGG | + | chr4.4:7388606-7388625 | None:intergenic | 60.0% | |
| CTGCTGGAACTAAGCGGGCA+CGG | + | chr4.4:7388620-7388639 | None:intergenic | 60.0% | |
| GAGGCAGAACCAGGAACCCA+TGG | - | chr4.4:7387627-7387646 | MS.gene49756:CDS | 60.0% | |
| GTAACACCGCATCGAGCTGC+AGG | + | chr4.4:7387938-7387957 | None:intergenic | 60.0% | |
| TCTGAACCGACACGTGGCAG+AGG | - | chr4.4:7385402-7385421 | MS.gene49756:CDS | 60.0% | |
| TGCCCGCTTAGTTCCAGCAG+TGG | - | chr4.4:7388620-7388639 | MS.gene49756:CDS | 60.0% | |
| ! | AGGGGGAGCATAAATGCCGG+TGG | + | chr4.4:7389536-7389555 | None:intergenic | 60.0% |
| ! | CCTGCTGAGGTACTTGCTGC+AGG | + | chr4.4:7387689-7387708 | None:intergenic | 60.0% |
| AGGCACAACGAGCACGGGGA+AGG | - | chr4.4:7389335-7389354 | MS.gene49756:intron | 65.0% | |
| CCACCACCTCTGCCACGTGT+CGG | + | chr4.4:7385411-7385430 | None:intergenic | 65.0% | |
| GAACCGACACGTGGCAGAGG+TGG | - | chr4.4:7385405-7385424 | MS.gene49756:CDS | 65.0% | |
| GCGGGCACGGTGTAGTTCAG+TGG | + | chr4.4:7388607-7388626 | None:intergenic | 65.0% | |
| TCAGTGGCAGCGATCAGGGG+AGG | - | chr4.4:7388551-7388570 | MS.gene49756:intron | 65.0% | |
| ! | ACTTGCTGCAGGGCCAGCAG+AGG | + | chr4.4:7387678-7387697 | None:intergenic | 65.0% |
| !! | GCAGGCTCTGGCGTTGGCAA+TGG | - | chr4.4:7389691-7389710 | MS.gene49756:intron | 65.0% |
| CCGACACGTGGCAGAGGTGG+TGG | - | chr4.4:7385408-7385427 | MS.gene49756:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 7385366 | 7389871 | 7385366 | ID=MS.gene49756 |
| chr4.4 | mRNA | 7385366 | 7389871 | 7385366 | ID=MS.gene49756.t1;Parent=MS.gene49756 |
| chr4.4 | exon | 7389692 | 7389871 | 7389692 | ID=MS.gene49756.t1.exon1;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7389692 | 7389871 | 7389692 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7389502 | 7389549 | 7389502 | ID=MS.gene49756.t1.exon2;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7389502 | 7389549 | 7389502 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7388858 | 7388959 | 7388858 | ID=MS.gene49756.t1.exon3;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7388858 | 7388959 | 7388858 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7388561 | 7388785 | 7388561 | ID=MS.gene49756.t1.exon4;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7388561 | 7388785 | 7388561 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7388358 | 7388440 | 7388358 | ID=MS.gene49756.t1.exon5;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7388358 | 7388440 | 7388358 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7388146 | 7388246 | 7388146 | ID=MS.gene49756.t1.exon6;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7388146 | 7388246 | 7388146 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7387770 | 7387893 | 7387770 | ID=MS.gene49756.t1.exon7;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7387770 | 7387893 | 7387770 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7387530 | 7387684 | 7387530 | ID=MS.gene49756.t1.exon8;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7387530 | 7387684 | 7387530 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7387216 | 7387352 | 7387216 | ID=MS.gene49756.t1.exon9;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7387216 | 7387352 | 7387216 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7386952 | 7387122 | 7386952 | ID=MS.gene49756.t1.exon10;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7386952 | 7387122 | 7386952 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7386584 | 7386808 | 7386584 | ID=MS.gene49756.t1.exon11;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7386584 | 7386808 | 7386584 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7385667 | 7385900 | 7385667 | ID=MS.gene49756.t1.exon12;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7385667 | 7385900 | 7385667 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| chr4.4 | exon | 7385366 | 7385542 | 7385366 | ID=MS.gene49756.t1.exon13;Parent=MS.gene49756.t1 |
| chr4.4 | CDS | 7385366 | 7385542 | 7385366 | ID=cds.MS.gene49756.t1;Parent=MS.gene49756.t1 |
| Gene Sequence |
| Protein sequence |
