AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50221

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50221.t1 MTR_5g072830 89.556 450 47 0 1 450 1 450 0.0 848
MS.gene50221.t1 MTR_5g072840 88.000 450 54 0 1 450 1 450 0.0 836
MS.gene50221.t1 MTR_5g072820 85.111 450 67 0 1 450 1 450 0.0 813
MS.gene50221.t1 MTR_5g072810 80.702 456 81 3 1 450 1 455 0.0 760
MS.gene50221.t1 MTR_5g072860 50.331 453 206 9 10 448 18 465 1.10e-150 437
MS.gene50221.t1 MTR_3g031400 48.322 447 214 7 7 448 15 449 1.13e-144 421
MS.gene50221.t1 MTR_5g075440 49.231 455 212 9 7 448 7 455 1.15e-143 418
MS.gene50221.t1 MTR_3g031450 46.889 450 216 10 8 448 16 451 2.95e-140 410
MS.gene50221.t1 MTR_5g072850 42.986 442 179 12 10 448 10 381 1.22e-104 316
MS.gene50221.t1 MTR_5g035580 29.512 471 274 14 10 450 13 455 7.93e-63 211
MS.gene50221.t1 MTR_6g013990 31.959 485 267 14 10 448 10 477 2.81e-62 209
MS.gene50221.t1 MTR_5g464810 30.913 482 274 15 10 448 12 477 1.53e-60 205
MS.gene50221.t1 MTR_5g064240 30.913 482 274 15 10 448 12 477 1.53e-60 205
MS.gene50221.t1 MTR_2g008210 29.218 486 291 15 3 448 4 476 1.43e-59 202
MS.gene50221.t1 MTR_8g059425 29.668 482 282 13 10 448 10 477 2.26e-59 202
MS.gene50221.t1 MTR_0036s0220 31.405 484 273 16 8 448 10 477 3.87e-59 201
MS.gene50221.t1 MTR_5g464760 30.642 483 276 14 10 448 12 479 1.97e-58 199
MS.gene50221.t1 MTR_6g038220 30.586 461 282 14 10 449 11 454 2.49e-58 198
MS.gene50221.t1 MTR_6g038240 30.197 457 288 12 10 448 11 454 1.27e-57 197
MS.gene50221.t1 MTR_6g038230 28.664 464 292 11 8 449 9 455 1.51e-57 196
MS.gene50221.t1 MTR_6g038300 29.847 459 290 11 10 449 11 456 1.65e-57 196
MS.gene50221.t1 MTR_7g080950 29.759 457 288 12 10 448 6 447 2.64e-57 196
MS.gene50221.t1 MTR_6g013920 30.021 483 280 13 10 448 10 478 3.64e-57 196
MS.gene50221.t1 MTR_6g038200 29.095 464 290 12 8 449 9 455 9.96e-57 194
MS.gene50221.t1 MTR_5g035560 29.211 469 274 16 10 448 11 451 1.91e-56 194
MS.gene50221.t1 MTR_6g014220 29.461 482 283 13 10 448 10 477 2.05e-56 194
MS.gene50221.t1 MTR_6g014187 29.132 484 284 16 10 448 10 479 3.22e-56 194
MS.gene50221.t1 MTR_7g080935 30.396 454 289 10 10 448 11 452 9.62e-56 192
MS.gene50221.t1 MTR_6g011340 31.006 487 271 15 10 448 10 479 1.51e-55 192
MS.gene50221.t1 MTR_3g084520 29.375 480 287 16 10 449 6 473 2.03e-55 191
MS.gene50221.t1 MTR_6g014270 28.367 490 290 13 6 448 3 478 7.33e-55 190
MS.gene50221.t1 MTR_6g013960 28.601 486 284 14 10 448 10 479 8.57e-55 190
MS.gene50221.t1 MTR_6g013900 29.193 483 284 13 10 448 10 478 4.12e-54 188
MS.gene50221.t1 MTR_6g014290 28.778 483 285 14 10 448 10 477 4.25e-54 188
MS.gene50221.t1 MTR_3g084540 29.072 485 283 17 10 449 6 474 4.67e-54 187
MS.gene50221.t1 MTR_6g014310 29.545 484 282 15 10 448 11 480 9.55e-54 187
MS.gene50221.t1 MTR_3g008010 28.216 482 289 14 10 448 10 477 2.06e-53 186
MS.gene50221.t1 MTR_6g014040 29.072 485 284 14 10 448 10 480 9.37e-53 184
MS.gene50221.t1 MTR_4g095008 30.087 462 274 17 19 448 20 464 2.24e-52 184
MS.gene50221.t1 MTR_6g014250 28.008 482 290 13 10 448 10 477 4.54e-52 182
MS.gene50221.t1 MTR_6g014020 28.926 484 285 16 10 448 10 479 6.06e-52 182
MS.gene50221.t1 MTR_4g094220 29.569 487 274 13 10 445 7 475 9.18e-52 182
MS.gene50221.t1 MTR_3g079480 29.278 485 280 15 10 448 21 488 1.29e-51 181
MS.gene50221.t1 MTR_3g084530 29.436 479 286 15 10 448 6 472 4.80e-51 179
MS.gene50221.t1 MTR_7g080900 27.753 454 303 11 10 448 12 455 9.46e-51 178
MS.gene50221.t1 MTR_6g013440 27.902 491 281 16 10 448 11 480 9.68e-51 179
MS.gene50221.t1 MTR_6g013450 27.423 485 292 12 10 448 10 480 2.06e-50 178
MS.gene50221.t1 MTR_8g083280 29.032 465 292 13 11 448 8 461 2.39e-50 177
MS.gene50221.t1 MTR_6g014170 28.542 480 274 14 10 448 10 461 1.32e-49 176
MS.gene50221.t1 MTR_6g014200 28.484 488 290 13 6 448 3 476 1.77e-49 175
MS.gene50221.t1 MTR_7g080940 29.011 455 294 11 10 448 11 452 1.81e-49 175
MS.gene50221.t1 MTR_5g058320 28.092 477 283 14 10 448 10 464 2.37e-49 175
MS.gene50221.t1 MTR_7g011470 28.125 480 280 15 10 448 10 465 3.97e-49 174
MS.gene50221.t1 MTR_3g479490 28.367 490 286 16 6 448 2 473 4.78e-49 174
MS.gene50221.t1 MTR_7g102460 28.807 486 301 13 4 448 3 484 4.95e-49 175
MS.gene50221.t1 MTR_8g083290 27.389 471 297 14 11 448 5 463 6.62e-49 174
MS.gene50221.t1 MTR_5g016480 28.998 469 281 12 18 448 16 470 6.64e-49 174
MS.gene50221.t1 MTR_3g479470 28.542 487 278 16 10 447 13 478 8.00e-49 174
MS.gene50221.t1 MTR_7g102490 28.195 493 299 14 3 448 2 486 9.06e-48 171
MS.gene50221.t1 MTR_6g014050 27.893 484 290 13 10 448 11 480 1.00e-47 171
MS.gene50221.t1 MTR_7g011470 27.917 480 277 15 10 448 10 461 1.02e-47 170
MS.gene50221.t1 MTR_0288s0020 28.008 482 273 14 10 448 10 460 2.76e-47 169
MS.gene50221.t1 MTR_4g094920 29.870 462 275 17 19 448 35 479 1.99e-46 167
MS.gene50221.t1 MTR_5g070090 29.645 479 273 19 10 450 11 463 5.22e-46 166
MS.gene50221.t1 MTR_8g088560 27.646 463 296 11 10 448 10 457 1.07e-45 165
MS.gene50221.t1 MTR_1g107380 30.423 355 221 10 112 448 126 472 1.09e-45 165
MS.gene50221.t1 MTR_7g013200 27.195 467 282 14 7 446 2 437 2.04e-45 164
MS.gene50221.t1 MTR_3g479520 27.686 484 289 15 10 448 15 482 2.49e-45 164
MS.gene50221.t1 MTR_6g014150 27.066 484 294 13 10 448 7 476 3.26e-45 164
MS.gene50221.t1 MTR_3g069710 28.294 463 287 9 11 450 13 453 5.90e-45 163
MS.gene50221.t1 MTR_1g107365 26.891 476 294 12 4 448 39 491 9.00e-45 163
MS.gene50221.t1 MTR_7g070660 28.361 476 303 14 9 450 10 481 9.27e-45 163
MS.gene50221.t1 MTR_5g098930 28.092 477 289 14 11 448 6 467 1.09e-44 162
MS.gene50221.t1 MTR_8g064870 28.485 495 268 16 11 450 12 475 2.17e-44 162
MS.gene50221.t1 MTR_4g024020 27.108 498 293 13 6 448 5 487 5.76e-44 161
MS.gene50221.t1 MTR_7g070610 27.743 483 300 15 10 450 13 488 5.89e-44 161
MS.gene50221.t1 MTR_1g107285 27.731 476 285 14 11 448 9 463 7.57e-44 160
MS.gene50221.t1 MTR_0184s0040 27.521 476 288 15 10 446 21 478 1.65e-43 159
MS.gene50221.t1 MTR_0078s0190 27.521 476 288 15 10 446 21 478 1.65e-43 159
MS.gene50221.t1 MTR_8g027885 28.953 487 250 13 11 441 19 465 2.18e-43 159
MS.gene50221.t1 MTR_1g107360 28.661 478 291 14 4 449 3 462 2.44e-43 159
MS.gene50221.t1 MTR_3g069690 26.709 468 294 12 9 450 7 451 3.04e-43 158
MS.gene50221.t1 MTR_7g071040 27.766 479 305 12 10 450 17 492 3.59e-43 159
MS.gene50221.t1 MTR_1g107375 27.837 467 302 10 3 448 1 453 3.69e-43 158
MS.gene50221.t1 MTR_8g027870 29.350 477 261 14 11 441 19 465 4.44e-43 158
MS.gene50221.t1 MTR_3g049970 27.235 481 304 14 4 450 3 471 5.37e-43 158
MS.gene50221.t1 MTR_8g009073 28.211 475 283 14 6 441 2 457 1.44e-42 156
MS.gene50221.t1 MTR_6g014240 26.471 476 277 15 10 448 7 446 1.73e-41 153
MS.gene50221.t1 MTR_1g032490 28.252 492 269 17 10 448 10 470 1.74e-41 154
MS.gene50221.t1 MTR_8g009063 27.143 490 290 15 1 444 1 469 2.56e-41 153
MS.gene50221.t1 MTR_8g009067 26.891 476 296 12 6 445 2 461 2.74e-41 153
MS.gene50221.t1 MTR_5g090700 26.240 484 302 11 9 448 4 476 2.89e-41 153
MS.gene50221.t1 MTR_6g014300 26.151 478 290 16 10 448 12 465 2.94e-41 153
MS.gene50221.t1 MTR_1g107315 28.980 490 286 16 3 450 1 470 3.13e-41 153
MS.gene50221.t1 MTR_3g009510 27.216 485 286 18 11 445 6 473 3.24e-41 153
MS.gene50221.t1 MTR_8g008970 26.383 470 298 11 6 441 2 457 4.13e-41 156
MS.gene50221.t1 MTR_8g008970 34.842 221 124 7 229 441 573 781 5.00e-27 114
MS.gene50221.t1 MTR_1g019510 26.834 477 292 14 6 444 2 459 8.02e-41 152
MS.gene50221.t1 MTR_6g033675 27.137 468 281 14 11 437 5 453 1.12e-40 152
MS.gene50221.t1 MTR_8g009050 25.786 477 300 13 6 444 2 462 1.25e-40 151
MS.gene50221.t1 MTR_1g107350 28.337 487 283 17 6 448 4 468 1.55e-40 151
MS.gene50221.t1 MTR_7g070930 26.875 480 308 13 10 450 14 489 3.14e-40 150
MS.gene50221.t1 MTR_7g070780 27.950 483 298 15 10 450 11 485 4.17e-40 150
MS.gene50221.t1 MTR_5g090660 26.141 482 301 10 9 448 4 472 4.34e-40 151
MS.gene50221.t1 MTR_7g055710 28.000 475 302 15 10 447 11 482 4.71e-40 150
MS.gene50221.t1 MTR_5g090630 26.205 477 300 11 9 448 4 465 4.72e-40 150
MS.gene50221.t1 MTR_8g009055 26.850 473 294 14 6 441 2 459 7.48e-40 149
MS.gene50221.t1 MTR_3g479610 31.046 306 180 8 163 448 18 312 1.54e-39 145
MS.gene50221.t1 MTR_6g033725 26.891 476 269 17 11 437 5 450 1.67e-39 148
MS.gene50221.t1 MTR_8g008990 26.471 476 294 12 6 441 2 461 1.68e-39 148
MS.gene50221.t1 MTR_8g009073 31.343 335 189 9 133 441 9 328 1.94e-39 145
MS.gene50221.t1 MTR_0078s0010 27.140 479 291 16 10 448 6 466 2.25e-39 148
MS.gene50221.t1 MTR_7g102520 27.066 484 305 15 10 450 12 490 3.03e-39 148
MS.gene50221.t1 MTR_5g087620 27.898 509 272 21 10 448 10 493 5.00e-39 147
MS.gene50221.t1 MTR_0536s0020 26.947 475 290 16 14 448 22 479 5.36e-39 147
MS.gene50221.t1 MTR_0477s0010 27.920 351 190 9 122 448 5 316 2.01e-38 142
MS.gene50221.t1 MTR_7g013180 27.350 468 279 17 10 446 5 442 3.14e-38 144
MS.gene50221.t1 MTR_5g031830 27.479 484 285 16 10 450 12 472 3.41e-38 145
MS.gene50221.t1 MTR_7g070940 26.778 478 301 14 10 450 9 474 3.49e-38 145
MS.gene50221.t1 MTR_7g070800 27.835 485 301 15 6 450 2 477 5.97e-38 144
MS.gene50221.t1 MTR_7g047030 27.176 471 287 17 10 441 6 459 6.44e-38 144
MS.gene50221.t1 MTR_7g047270 27.176 471 287 17 10 441 6 459 6.44e-38 144
MS.gene50221.t1 MTR_8g064880 28.370 497 280 17 6 450 5 477 6.87e-38 144
MS.gene50221.t1 MTR_7g070860 28.085 470 297 12 10 450 7 464 8.77e-38 144
MS.gene50221.t1 MTR_5g072825 72.222 90 20 2 10 99 10 94 9.21e-38 133
MS.gene50221.t1 MTR_8g066610 25.767 489 297 18 10 450 9 479 9.67e-38 144
MS.gene50221.t1 MTR_0078s0060 26.250 480 293 17 10 448 6 465 9.77e-38 143
MS.gene50221.t1 MTR_5g090600 27.521 476 283 14 9 448 4 453 1.87e-37 142
MS.gene50221.t1 MTR_8g009067 29.882 338 198 8 133 445 20 343 2.48e-37 140
MS.gene50221.t1 MTR_7g102450 26.132 486 287 13 10 448 11 471 2.87e-37 142
MS.gene50221.t1 MTR_4g485630 27.198 489 286 16 10 450 9 475 2.97e-37 142
MS.gene50221.t1 MTR_4g117890 27.311 476 283 15 14 446 17 472 3.68e-37 142
MS.gene50221.t1 MTR_5g031840 25.941 478 298 15 10 450 5 463 4.03e-37 141
MS.gene50221.t1 MTR_7g013220 25.684 475 290 14 7 446 2 448 4.04e-37 141
MS.gene50221.t1 MTR_7g102560 25.567 485 305 11 10 448 9 483 1.17e-36 140
MS.gene50221.t1 MTR_1g062380 25.207 484 311 12 10 448 16 493 1.42e-36 140
MS.gene50221.t1 MTR_7g070910 26.434 488 300 15 10 450 11 486 1.75e-36 140
MS.gene50221.t1 MTR_1g029540 27.646 463 286 15 15 449 19 460 1.80e-36 140
MS.gene50221.t1 MTR_8g006730 26.415 477 289 19 10 444 6 462 2.23e-36 139
MS.gene50221.t1 MTR_5g090670 26.680 491 291 18 9 448 4 476 3.44e-36 139
MS.gene50221.t1 MTR_7g117405 27.935 494 280 15 8 448 10 480 3.48e-36 139
MS.gene50221.t1 MTR_2g040530 24.477 478 304 10 11 449 6 465 4.71e-36 139
MS.gene50221.t1 MTR_7g070810 26.625 477 306 16 10 450 9 477 5.74e-36 139
MS.gene50221.t1 MTR_6g014190 29.530 298 180 7 169 448 1 286 7.23e-36 134
MS.gene50221.t1 MTR_5g090620 25.103 486 304 13 9 448 4 475 7.23e-36 138
MS.gene50221.t1 MTR_4g485620 27.187 423 262 15 61 450 47 456 7.30e-36 138
MS.gene50221.t1 MTR_7g117170 26.004 473 288 13 11 441 16 468 1.41e-35 137
MS.gene50221.t1 MTR_8g043470 24.816 407 236 10 65 448 18 377 1.49e-35 135
MS.gene50221.t1 MTR_5g019580 27.515 487 288 18 10 447 7 477 2.08e-35 137
MS.gene50221.t1 MTR_5g031860 26.360 478 297 13 10 450 12 471 2.41e-35 137
MS.gene50221.t1 MTR_8g077590 28.000 475 281 16 10 444 9 462 3.76e-35 136
MS.gene50221.t1 MTR_7g070740 26.403 481 308 13 10 450 11 485 4.15e-35 136
MS.gene50221.t1 MTR_7g013240 25.000 460 294 13 10 446 6 437 7.11e-35 135
MS.gene50221.t1 MTR_4g031800 25.572 481 301 14 11 450 10 474 8.67e-35 135
MS.gene50221.t1 MTR_5g019580 27.593 482 266 19 10 447 59 501 1.05e-34 135
MS.gene50221.t1 MTR_7g013260 25.376 465 287 14 10 446 6 438 1.22e-34 134
MS.gene50221.t1 MTR_8g074550 26.611 481 291 14 9 437 7 477 3.00e-34 134
MS.gene50221.t1 MTR_4g064987 28.112 466 280 15 11 450 9 445 3.69e-34 133
MS.gene50221.t1 MTR_8g006710 27.366 486 282 21 11 450 7 467 4.22e-34 133
MS.gene50221.t1 MTR_5g090610 24.051 474 309 10 9 448 4 460 5.70e-34 133
MS.gene50221.t1 MTR_5g070040 28.017 464 281 17 9 437 10 455 6.06e-34 133
MS.gene50221.t1 MTR_8g465670 24.532 481 296 17 11 445 8 467 6.21e-34 133
MS.gene50221.t1 MTR_7g102550 25.417 480 312 13 10 447 9 484 6.27e-34 133
MS.gene50221.t1 MTR_6g014160 27.273 308 179 10 77 364 75 357 1.02e-33 131
MS.gene50221.t1 MTR_6g078320 26.598 485 274 20 8 436 9 467 1.42e-33 132
MS.gene50221.t1 MTR_4g064987 28.145 469 282 16 11 450 9 451 1.59e-33 131
MS.gene50221.t1 MTR_5g045970 25.152 493 299 15 10 448 16 492 2.49e-33 131
MS.gene50221.t1 MTR_4g082820 28.810 479 281 16 6 445 3 460 2.74e-33 131
MS.gene50221.t1 MTR_0891s0010 29.333 300 181 9 169 448 1 289 4.69e-33 127
MS.gene50221.t1 MTR_6g005600 31.922 307 162 8 166 441 170 460 5.60e-33 130
MS.gene50221.t1 MTR_5g045960 25.948 501 285 18 10 448 9 485 6.03e-33 130
MS.gene50221.t1 MTR_4g108250 25.155 485 313 14 10 450 11 489 6.97e-33 130
MS.gene50221.t1 MTR_6g488280 26.349 482 279 18 11 444 7 460 1.23e-32 129
MS.gene50221.t1 MTR_0428s0010 26.349 482 279 18 11 444 7 460 1.23e-32 129
MS.gene50221.t1 MTR_6g023665 26.205 477 286 18 11 444 14 467 1.45e-32 129
MS.gene50221.t1 MTR_4g117980 26.543 486 287 16 14 448 15 481 1.58e-32 129
MS.gene50221.t1 MTR_4g117960 26.250 480 295 15 14 448 15 480 2.00e-32 129
MS.gene50221.t1 MTR_8g006260 28.846 312 179 6 160 442 166 463 2.29e-32 128
MS.gene50221.t1 MTR_6g033660 28.152 341 202 10 123 437 129 452 3.12e-32 128
MS.gene50221.t1 MTR_7g046490 29.619 341 201 10 130 446 136 461 3.50e-32 128
MS.gene50221.t1 MTR_5g016660 26.992 389 244 10 94 450 105 485 1.28e-31 126
MS.gene50221.t1 MTR_6g035185 24.268 478 309 14 14 448 15 482 1.58e-31 126
MS.gene50221.t1 MTR_4g082810 29.440 411 244 14 6 381 3 402 2.36e-31 124
MS.gene50221.t1 MTR_5g090580 25.051 487 302 14 9 448 4 474 2.44e-31 125
MS.gene50221.t1 MTR_8g012650 35.341 249 122 7 229 450 237 473 3.07e-31 125
MS.gene50221.t1 MTR_2g098430 26.273 491 287 19 11 446 7 477 4.60e-31 125
MS.gene50221.t1 MTR_8g007585 34.804 204 114 3 254 448 198 391 6.24e-31 123
MS.gene50221.t1 MTR_0184s0030 25.420 476 282 15 10 437 6 456 6.74e-31 124
MS.gene50221.t1 MTR_4g118000 24.468 470 301 16 14 448 16 466 9.06e-31 124
MS.gene50221.t1 MTR_2g046820 31.227 269 150 7 205 449 206 463 9.15e-31 124
MS.gene50221.t1 MTR_8g012635 34.400 250 123 7 229 450 237 473 1.12e-30 124
MS.gene50221.t1 MTR_6g033625 23.983 467 297 12 11 437 5 453 1.19e-30 123
MS.gene50221.t1 MTR_8g012745 27.568 370 221 10 108 444 109 464 1.49e-30 123
MS.gene50221.t1 MTR_8g090095 29.747 474 271 22 15 449 30 480 1.58e-30 123
MS.gene50221.t1 MTR_2g046750 31.086 267 153 7 205 449 209 466 1.77e-30 123
MS.gene50221.t1 MTR_2g035020 25.767 489 293 13 11 448 12 481 2.77e-30 123
MS.gene50221.t1 MTR_8g006220 24.646 495 287 18 11 445 7 475 3.52e-30 122
MS.gene50221.t1 MTR_5g039900 27.642 369 244 7 105 450 117 485 4.75e-30 122
MS.gene50221.t1 MTR_6g033615 24.947 473 271 14 11 437 5 439 6.89e-30 121
MS.gene50221.t1 MTR_0009s0240 23.241 469 309 13 9 445 6 455 7.23e-30 121
MS.gene50221.t1 MTR_6g013680 25.362 414 225 15 65 448 15 374 2.25e-29 118
MS.gene50221.t1 MTR_8g466240 25.105 474 294 15 10 449 8 454 3.10e-29 119
MS.gene50221.t1 MTR_8g044140 26.598 391 250 12 90 450 67 450 3.71e-29 119
MS.gene50221.t1 MTR_7g070870 24.788 472 294 15 10 450 19 460 6.59e-29 119
MS.gene50221.t1 MTR_6g035265 24.160 476 305 17 14 449 15 474 1.45e-28 117
MS.gene50221.t1 MTR_8g012630 36.279 215 104 5 256 444 204 411 1.57e-28 117
MS.gene50221.t1 MTR_1g019520 32.864 213 115 4 254 444 2 208 1.65e-28 112
MS.gene50221.t1 MTR_8g012730 36.207 232 110 6 239 444 85 304 2.66e-28 114
MS.gene50221.t1 MTR_6g035295 26.702 382 230 12 106 450 118 486 3.04e-28 117
MS.gene50221.t1 MTR_8g071070 22.614 482 304 15 10 445 7 465 5.47e-28 116
MS.gene50221.t1 MTR_2g035040 28.117 377 220 11 110 448 23 386 9.03e-28 114
MS.gene50221.t1 MTR_5g040030 27.154 383 228 14 106 450 120 489 1.11e-27 115
MS.gene50221.t1 MTR_5g067170 23.958 480 305 13 14 448 15 479 1.61e-27 115
MS.gene50221.t1 MTR_4g117950 23.355 471 307 13 14 448 10 462 1.81e-27 114
MS.gene50221.t1 MTR_8g006270 26.166 386 240 10 94 446 88 461 2.29e-27 114
MS.gene50221.t1 MTR_7g071050 25.926 459 254 15 10 431 13 422 2.58e-27 113
MS.gene50221.t1 MTR_2g034990 24.792 480 303 16 14 448 15 481 3.42e-27 114
MS.gene50221.t1 MTR_1g040310 26.893 383 241 12 99 450 111 485 3.79e-27 114
MS.gene50221.t1 MTR_8g032950 28.333 300 174 10 184 448 187 480 7.60e-27 113
MS.gene50221.t1 MTR_2g008220 24.724 453 293 18 10 431 14 449 1.14e-26 112
MS.gene50221.t1 MTR_5g098960 22.951 427 296 9 11 409 8 429 1.18e-26 112
MS.gene50221.t1 MTR_0536s0010 24.066 482 289 18 14 448 25 476 1.70e-26 112
MS.gene50221.t1 MTR_5g027210 22.944 462 276 14 11 409 5 449 2.11e-26 111
MS.gene50221.t1 MTR_7g012120 29.078 282 167 8 196 448 206 483 5.22e-26 110
MS.gene50221.t1 MTR_2g059240 23.941 472 310 15 10 448 13 468 1.01e-25 109
MS.gene50221.t1 MTR_4g485640 25.054 463 296 16 18 445 217 663 1.18e-25 110
MS.gene50221.t1 MTR_7g470610 27.698 278 166 6 120 378 5 266 2.51e-25 105
MS.gene50221.t1 MTR_7g070583 27.698 278 166 6 120 378 5 266 2.51e-25 105
MS.gene50221.t1 MTR_8g007565 25.169 445 289 14 10 422 7 439 4.93e-25 107
MS.gene50221.t1 MTR_4g485590 24.444 405 235 12 10 378 9 378 6.28e-25 106
MS.gene50221.t1 MTR_8g007650 25.169 445 289 14 10 422 7 439 9.02e-25 106
MS.gene50221.t1 MTR_5g004940 30.973 226 115 6 234 448 182 377 3.85e-24 103
MS.gene50221.t1 MTR_6g014186 22.934 484 276 17 10 448 7 438 4.74e-24 104
MS.gene50221.t1 MTR_7g080960 29.148 223 105 3 232 448 295 470 4.88e-24 104
MS.gene50221.t1 MTR_7g039550 29.572 257 145 8 222 450 15 263 6.69e-24 101
MS.gene50221.t1 MTR_7g067120 23.059 438 277 14 10 426 9 407 6.70e-24 103
MS.gene50221.t1 MTR_5g066410 25.792 442 267 17 14 422 2 415 1.01e-23 103
MS.gene50221.t1 MTR_6g014185 29.921 254 144 5 199 448 121 344 1.26e-23 102
MS.gene50221.t1 MTR_8g068330 23.125 480 313 18 6 450 4 462 1.74e-23 102
MS.gene50221.t1 MTR_7g067330 22.738 431 287 16 10 426 9 407 1.84e-23 102
MS.gene50221.t1 MTR_5g066390 33.333 195 107 5 263 448 34 214 7.59e-23 96.7
MS.gene50221.t1 MTR_2g008225 23.789 475 299 20 10 448 15 462 8.44e-23 100
MS.gene50221.t1 MTR_7g070760 30.726 179 104 2 206 378 34 198 1.08e-22 95.9
MS.gene50221.t1 MTR_5g029800 31.193 218 127 6 253 448 261 477 1.37e-22 100
MS.gene50221.t1 MTR_4g128690 22.432 477 311 17 3 450 8 454 2.03e-22 99.8
MS.gene50221.t1 MTR_4g128720 28.079 203 132 3 253 450 264 457 1.17e-21 97.4
MS.gene50221.t1 MTR_5g072827 82.692 52 9 0 398 449 35 86 1.18e-21 89.7
MS.gene50221.t1 MTR_6g036650 24.359 468 298 18 2 433 10 457 1.72e-21 97.1
MS.gene50221.t1 MTR_4g123553 23.182 440 300 14 10 426 15 439 3.44e-21 96.3
MS.gene50221.t1 MTR_4g077960 27.007 274 181 8 166 426 149 416 4.90e-21 95.5
MS.gene50221.t1 MTR_2086s0010 31.073 177 102 5 282 448 5 171 5.29e-21 90.5
MS.gene50221.t1 MTR_1996s0010 31.073 177 102 5 282 448 5 171 5.29e-21 90.5
MS.gene50221.t1 MTR_4g059370 29.583 240 140 8 196 418 135 362 1.15e-20 94.0
MS.gene50221.t1 MTR_6g042310 23.831 449 297 17 10 431 18 448 6.18e-20 92.4
MS.gene50221.t1 MTR_6g014000 37.405 131 72 2 314 444 31 151 9.39e-20 92.0
MS.gene50221.t1 MTR_1g090270 25.862 464 258 20 4 418 9 435 1.13e-19 91.7
MS.gene50221.t1 MTR_2g008226 28.085 235 148 8 200 423 221 445 1.31e-19 91.3
MS.gene50221.t1 MTR_2g014900 24.036 441 284 13 8 417 5 425 2.01e-19 90.9
MS.gene50221.t1 MTR_0536s0030 34.177 158 95 4 299 450 199 353 3.02e-19 89.4
MS.gene50221.t1 MTR_3g009490 29.630 189 104 5 282 446 3 186 3.65e-19 85.5
MS.gene50221.t1 MTR_1g107325 24.779 452 220 18 10 448 8 352 4.78e-19 88.6
MS.gene50221.t1 MTR_2g046620 27.542 236 156 7 200 426 211 440 5.81e-19 89.4
MS.gene50221.t1 MTR_8g068340 25.188 266 176 8 172 424 189 444 8.04e-19 89.0
MS.gene50221.t1 MTR_8g009840 31.937 191 95 6 277 441 337 518 1.14e-18 89.0
MS.gene50221.t1 MTR_7g070995 34.932 146 88 4 311 450 2 146 2.08e-18 82.4
MS.gene50221.t1 MTR_8g068360 26.778 239 152 9 199 424 215 443 1.06e-17 85.5
MS.gene50221.t1 MTR_8g056740 36.029 136 79 3 251 378 163 298 1.39e-17 84.7
MS.gene50221.t1 MTR_5g090690 30.556 144 75 3 229 350 166 306 1.49e-15 78.6
MS.gene50221.t1 MTR_2g083390 24.249 433 280 17 10 424 8 410 3.25e-15 77.8
MS.gene50221.t1 MTR_2g083380 29.004 231 134 7 210 424 235 451 1.34e-14 76.3
MS.gene50221.t1 MTR_2g083480 25.311 241 150 6 200 424 208 434 2.23e-14 75.5
MS.gene50221.t1 MTR_3g435310 29.121 182 110 7 254 423 221 395 4.48e-14 74.3
MS.gene50221.t1 MTR_4g079250 25.726 241 151 6 199 424 207 434 1.48e-13 72.8
MS.gene50221.t1 MTR_4g079270 23.651 241 156 5 199 424 207 434 2.46e-13 72.0
MS.gene50221.t1 MTR_6g013435 24.036 337 184 11 132 448 22 306 5.52e-13 70.1
MS.gene50221.t1 MTR_2g083490 26.549 226 144 6 211 424 219 434 1.91e-11 66.2
MS.gene50221.t1 MTR_6g013890 23.618 199 110 8 152 328 21 199 2.59e-11 64.3
MS.gene50221.t1 MTR_8g006230 25.604 207 144 4 102 303 45 246 3.44e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50221.t1 AT2G30150 48.230 452 217 8 7 449 10 453 1.19e-146 426
MS.gene50221.t1 AT2G30150 47.865 445 215 8 14 449 1 437 1.69e-143 417
MS.gene50221.t1 AT2G30140 46.532 447 226 7 10 450 13 452 1.59e-138 405
MS.gene50221.t1 AT2G30140 46.652 448 225 7 10 450 13 453 2.36e-138 405
MS.gene50221.t1 AT2G28080 29.787 470 279 16 14 450 22 473 2.45e-64 215
MS.gene50221.t1 AT1G22400 30.498 482 275 16 10 446 13 479 1.90e-60 205
MS.gene50221.t1 AT1G22340 30.309 485 276 16 10 448 13 481 6.74e-60 203
MS.gene50221.t1 AT1G05675 30.043 466 276 14 10 446 6 450 4.44e-59 200
MS.gene50221.t1 AT1G22360 28.750 480 289 14 10 448 10 477 3.47e-58 199
MS.gene50221.t1 AT1G05680 30.538 465 275 15 10 446 6 450 1.21e-57 196
MS.gene50221.t1 AT1G22380 28.834 489 291 15 3 448 6 480 6.63e-57 196
MS.gene50221.t1 AT1G78270 28.364 483 287 14 10 448 13 480 6.99e-57 196
MS.gene50221.t1 AT1G22360 28.333 480 279 14 10 448 10 465 1.99e-55 191
MS.gene50221.t1 AT3G21560 28.870 478 288 14 10 450 12 474 2.24e-55 192
MS.gene50221.t1 AT2G36970 26.096 479 296 12 10 448 10 470 2.42e-55 191
MS.gene50221.t1 AT2G31750 30.277 469 281 14 7 448 5 454 1.45e-54 188
MS.gene50221.t1 AT4G15550 28.512 484 276 14 10 447 13 472 1.84e-54 189
MS.gene50221.t1 AT2G31750 30.277 469 281 14 7 448 5 454 2.70e-54 189
MS.gene50221.t1 AT1G05560 28.238 471 282 12 10 448 5 451 5.42e-54 187
MS.gene50221.t1 AT1G05560 28.238 471 282 12 10 448 55 501 1.39e-53 187
MS.gene50221.t1 AT1G22370 27.883 477 292 11 10 448 13 475 1.60e-52 184
MS.gene50221.t1 AT4G15500 29.485 485 265 16 10 448 9 462 1.62e-52 184
MS.gene50221.t1 AT4G15490 28.392 479 283 16 10 448 8 466 1.16e-51 181
MS.gene50221.t1 AT2G31790 30.193 467 276 16 10 446 8 454 1.79e-50 177
MS.gene50221.t1 AT4G15480 27.521 476 296 13 10 450 19 480 4.57e-49 174
MS.gene50221.t1 AT2G43840 29.284 461 283 16 10 448 7 446 2.08e-48 172
MS.gene50221.t1 AT2G43840 29.284 461 283 16 10 448 7 446 3.63e-48 171
MS.gene50221.t1 AT2G43820 28.233 464 288 13 10 450 7 448 1.33e-47 170
MS.gene50221.t1 AT1G24100 26.882 465 297 11 10 448 11 458 2.32e-47 169
MS.gene50221.t1 AT2G23260 29.526 464 284 15 10 449 10 454 2.39e-45 164
MS.gene50221.t1 AT1G05530 25.862 464 305 7 10 448 5 454 3.12e-45 164
MS.gene50221.t1 AT3G02100 28.511 470 286 13 10 450 13 461 6.03e-45 163
MS.gene50221.t1 AT2G23250 28.821 458 283 15 11 448 1 435 2.39e-44 160
MS.gene50221.t1 AT5G38040 29.348 460 268 15 18 448 18 449 1.77e-43 159
MS.gene50221.t1 AT2G29740 29.193 483 284 13 9 448 7 474 2.37e-43 159
MS.gene50221.t1 AT3G53160 28.049 492 284 18 10 448 8 482 1.16e-42 157
MS.gene50221.t1 AT4G01070 26.638 473 286 14 10 441 8 460 1.84e-42 156
MS.gene50221.t1 AT5G59590 27.234 470 281 13 10 448 10 449 3.94e-42 155
MS.gene50221.t1 AT2G36750 26.994 489 292 14 10 448 10 483 4.05e-42 155
MS.gene50221.t1 AT1G10400 28.846 468 292 17 10 448 7 462 5.39e-42 155
MS.gene50221.t1 AT3G46660 28.571 469 280 13 11 450 15 457 8.07e-42 154
MS.gene50221.t1 AT5G05900 28.112 466 282 14 11 449 9 448 2.72e-41 153
MS.gene50221.t1 AT4G15280 26.721 494 283 15 10 448 4 473 4.43e-41 152
MS.gene50221.t1 AT3G46670 27.371 464 282 12 10 445 9 445 6.69e-41 152
MS.gene50221.t1 AT4G15280 26.721 494 283 15 10 448 36 505 9.66e-41 152
MS.gene50221.t1 AT2G16890 29.025 472 289 18 10 448 9 467 9.85e-41 152
MS.gene50221.t1 AT3G11340 26.407 462 293 12 11 450 10 446 1.42e-40 150
MS.gene50221.t1 AT3G21790 27.066 484 301 14 10 449 4 479 4.29e-40 150
MS.gene50221.t1 AT2G36760 26.915 483 301 14 10 448 14 488 4.48e-40 150
MS.gene50221.t1 AT3G46690 27.015 459 291 12 10 445 9 446 2.17e-39 147
MS.gene50221.t1 AT3G46700 26.304 460 298 11 10 450 9 446 2.71e-39 147
MS.gene50221.t1 AT2G36780 27.950 483 296 16 10 448 14 488 2.93e-39 148
MS.gene50221.t1 AT4G14090 25.602 457 306 14 10 447 13 454 3.66e-39 147
MS.gene50221.t1 AT5G59580 26.709 468 285 13 10 448 9 447 5.71e-39 146
MS.gene50221.t1 AT5G05860 27.922 462 287 11 10 448 9 447 9.86e-39 145
MS.gene50221.t1 AT2G36800 27.178 482 302 16 10 448 12 487 2.29e-38 145
MS.gene50221.t1 AT3G55700 29.738 343 207 10 123 450 129 452 2.59e-38 145
MS.gene50221.t1 AT2G29750 28.125 480 292 14 9 448 7 473 3.60e-38 145
MS.gene50221.t1 AT5G38010 25.974 462 301 10 10 448 10 453 1.08e-37 143
MS.gene50221.t1 AT4G15260 27.747 364 210 8 122 448 7 354 2.01e-37 140
MS.gene50221.t1 AT3G21760 24.795 488 309 15 10 449 4 481 8.18e-37 141
MS.gene50221.t1 AT1G07250 28.779 344 220 8 123 448 136 472 9.37e-37 141
MS.gene50221.t1 AT1G07260 27.572 486 291 17 7 448 3 471 1.00e-36 140
MS.gene50221.t1 AT5G05870 26.013 469 297 12 10 449 8 455 2.41e-36 139
MS.gene50221.t1 AT4G36770 26.509 464 280 13 9 431 3 446 5.84e-36 138
MS.gene50221.t1 AT1G01390 26.316 475 285 14 10 441 8 460 7.53e-36 138
MS.gene50221.t1 AT1G01390 26.316 475 285 14 10 441 25 477 8.26e-36 138
MS.gene50221.t1 AT2G18570 30.132 302 176 6 165 441 168 459 1.94e-35 137
MS.gene50221.t1 AT4G34131 25.567 485 304 17 10 450 10 481 2.27e-35 137
MS.gene50221.t1 AT2G36770 25.462 487 303 14 10 448 14 488 2.47e-35 137
MS.gene50221.t1 AT5G05890 25.800 469 298 10 10 450 8 454 2.91e-35 136
MS.gene50221.t1 AT5G14860 26.722 479 300 20 10 448 8 475 3.04e-35 137
MS.gene50221.t1 AT3G21780 28.032 371 204 11 122 449 119 469 8.19e-35 135
MS.gene50221.t1 AT2G16890 29.117 419 255 15 10 396 9 417 8.72e-35 134
MS.gene50221.t1 AT5G05880 25.910 467 296 12 10 450 8 450 1.28e-34 134
MS.gene50221.t1 AT3G46680 25.641 468 288 14 10 446 9 447 1.38e-34 134
MS.gene50221.t1 AT3G46650 25.870 460 283 12 6 444 6 428 1.54e-34 134
MS.gene50221.t1 AT3G21800 33.210 271 148 7 205 449 213 476 1.72e-34 134
MS.gene50221.t1 AT2G18560 28.485 330 198 7 140 441 50 369 2.30e-34 132
MS.gene50221.t1 AT3G46720 26.096 456 288 11 11 445 10 437 2.69e-34 133
MS.gene50221.t1 AT2G29710 25.840 476 296 17 11 448 6 462 3.24e-34 134
MS.gene50221.t1 AT2G36790 26.369 493 291 15 10 448 13 487 3.40e-34 134
MS.gene50221.t1 AT4G34138 25.208 480 308 14 10 449 11 479 3.55e-34 134
MS.gene50221.t1 AT2G15480 23.695 498 326 16 1 450 1 492 3.74e-34 134
MS.gene50221.t1 AT2G29730 24.842 475 306 17 9 448 4 462 7.74e-34 132
MS.gene50221.t1 AT5G12890 27.122 483 291 20 10 445 10 478 9.50e-34 132
MS.gene50221.t1 AT2G15480 23.673 490 326 16 1 450 1 482 1.11e-33 132
MS.gene50221.t1 AT1G51210 24.545 440 295 14 2 423 12 432 1.48e-33 131
MS.gene50221.t1 AT5G03490 25.870 460 302 16 10 447 19 461 1.60e-33 131
MS.gene50221.t1 AT5G26310 26.549 339 197 12 138 441 139 460 7.44e-33 130
MS.gene50221.t1 AT3G53150 25.099 506 294 14 10 448 22 509 8.38e-33 130
MS.gene50221.t1 AT3G16520 28.406 345 212 10 122 445 126 456 2.29e-32 128
MS.gene50221.t1 AT3G55710 27.243 301 194 7 164 450 167 456 2.80e-32 128
MS.gene50221.t1 AT1G01420 24.790 476 292 16 10 442 8 460 3.20e-32 128
MS.gene50221.t1 AT1G01420 24.790 476 292 16 10 442 11 463 3.69e-32 128
MS.gene50221.t1 AT2G15490 24.174 484 313 16 10 450 7 479 7.64e-32 127
MS.gene50221.t1 AT1G07240 27.966 354 216 10 122 448 134 475 1.08e-31 127
MS.gene50221.t1 AT1G22370 27.687 307 191 7 162 448 10 305 1.25e-31 123
MS.gene50221.t1 AT2G15490 24.025 487 313 16 10 450 7 482 1.83e-31 126
MS.gene50221.t1 AT3G50740 25.732 478 291 15 10 441 7 466 4.20e-31 125
MS.gene50221.t1 AT3G21750 24.217 479 309 15 10 448 4 468 1.66e-30 123
MS.gene50221.t1 AT3G16520 28.704 324 196 10 122 424 126 435 1.76e-30 122
MS.gene50221.t1 AT3G16520 28.280 343 208 11 122 443 126 451 1.92e-30 122
MS.gene50221.t1 AT5G17040 22.030 463 315 13 7 448 2 439 3.55e-29 119
MS.gene50221.t1 AT5G66690 26.935 323 180 11 138 424 139 441 4.00e-29 119
MS.gene50221.t1 AT4G34135 26.337 486 300 17 10 450 11 483 1.88e-28 117
MS.gene50221.t1 AT1G73880 24.788 472 307 15 10 450 14 468 2.87e-28 117
MS.gene50221.t1 AT5G37950 26.923 312 208 8 64 360 35 341 5.10e-28 114
MS.gene50221.t1 AT2G26480 24.353 464 298 13 11 448 9 445 8.78e-28 115
MS.gene50221.t1 AT5G17050 22.388 469 314 15 10 448 12 460 2.74e-27 114
MS.gene50221.t1 AT5G37950 27.129 317 207 9 64 360 35 347 3.20e-26 109
MS.gene50221.t1 AT5G17030 22.505 471 306 14 10 448 12 455 4.14e-26 110
MS.gene50221.t1 AT5G49690 25.446 448 283 18 6 424 6 431 1.66e-25 108
MS.gene50221.t1 AT5G17040 25.882 255 169 7 201 448 96 337 4.64e-24 102
MS.gene50221.t1 AT3G22250 24.183 459 272 14 11 420 9 440 1.01e-23 103
MS.gene50221.t1 AT5G65550 24.793 484 280 22 10 445 9 456 6.50e-23 101
MS.gene50221.t1 AT2G22590 23.663 486 295 20 5 445 9 463 7.07e-23 101
MS.gene50221.t1 AT1G30530 21.720 465 312 14 10 448 12 450 7.22e-23 100
MS.gene50221.t1 AT1G06000 21.748 469 292 9 10 448 10 433 1.68e-21 97.1
MS.gene50221.t1 AT4G01070 25.962 312 198 10 10 302 8 305 1.37e-17 84.3
MS.gene50221.t1 AT1G64910 22.509 271 189 6 190 449 182 442 5.82e-14 73.9
MS.gene50221.t1 AT4G27570 24.345 267 169 7 197 448 195 443 6.86e-14 73.9
MS.gene50221.t1 AT2G16890 27.796 313 190 13 10 296 9 311 7.69e-13 69.7
MS.gene50221.t1 AT2G16890 27.796 313 190 13 10 296 9 311 7.69e-13 69.7
MS.gene50221.t1 AT1G64920 23.221 267 172 7 197 444 189 441 2.26e-12 69.3
MS.gene50221.t1 AT4G27560 24.255 235 151 5 197 417 195 416 7.06e-12 67.8
MS.gene50221.t1 AT5G53990 23.016 252 165 5 190 426 182 419 8.18e-12 67.4
MS.gene50221.t1 AT5G54010 25.292 257 159 7 207 448 205 443 6.52e-11 64.7
MS.gene50221.t1 AT4G09500 22.478 347 222 9 103 426 97 419 8.49e-11 64.3

Find 115 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAATGATTTCGTCAATT+TGG 0.114963 5.2:-61006320 None:intergenic
ATTCTTCTATAGGTGGATTT+TGG 0.179900 5.2:+61006466 MS.gene50221:CDS
GAAAGGGGAATATAGATTTA+AGG 0.202145 5.2:-61006137 None:intergenic
AGAGCTTGTTAAGAGGTTTA+TGG 0.222847 5.2:+61006674 MS.gene50221:CDS
CCCTTTCCAGTCTATCCTAT+TGG 0.252701 5.2:+61006153 MS.gene50221:CDS
TTCAATGATTTCGTCAATTT+GGG 0.270600 5.2:-61006319 None:intergenic
AAGCGGATGGATTCCGGCTT+TGG 0.291853 5.2:-61003956 None:intergenic
GGGTTGATGTGTCCTCTTCC+TGG 0.309405 5.2:-61003833 None:intergenic
GAAGAATGGCTTGGCTTTAT+CGG 0.333748 5.2:+61003926 MS.gene50221:CDS
ATAGCCACGACTATATAAAA+TGG 0.342341 5.2:+61006229 MS.gene50221:CDS
TCTTGATCAACTTGAGTTGC+CGG 0.349946 5.2:+61004087 MS.gene50221:CDS
ATATTCCGGTGGCATCTCTT+TGG 0.354772 5.2:+61004170 MS.gene50221:CDS
GTGTTGTCTCATTCTTCTAT+AGG 0.358785 5.2:+61006456 MS.gene50221:CDS
GTGGCGAAGCGGATGGATTC+CGG 0.363290 5.2:-61003962 None:intergenic
AGATAGAGCAAGAGAACTTA+AGG 0.368648 5.2:+61006728 MS.gene50221:CDS
TCAGTGACATTTCGTCTTGA+AGG 0.377463 5.2:+61006811 MS.gene50221:CDS
CGCTCCGGTGGAGCCACGTT+GGG 0.384156 5.2:-61003989 None:intergenic
GAGAAGAAGGTAATTTGCTT+TGG 0.386745 5.2:-61006076 None:intergenic
GCAGTTTCAGTTCCGCGTCT+AGG 0.400145 5.2:+61006295 MS.gene50221:CDS
ATGTGTCCTCTTCCTGGAAA+TGG 0.401745 5.2:-61003827 None:intergenic
GTTGTGGCGATGCCATTTCC+AGG 0.402813 5.2:+61003815 MS.gene50221:CDS
TCAAAACATGCAGCTCTCAT+TGG 0.407163 5.2:+61006035 MS.gene50221:CDS
AAAAGTGATAAGAATGTTGT+TGG 0.408062 5.2:-61003894 None:intergenic
GTAATTTGCTTTGGTAACCT+TGG 0.422290 5.2:-61006067 None:intergenic
TAAGGTACTGCAGGACCAAT+AGG 0.426052 5.2:-61006168 None:intergenic
AACGTGGCACACGGCGTCGC+CGG 0.431072 5.2:-61003795 None:intergenic
GGCCTGTTGACGTTGGTAAT+CGG 0.431700 5.2:+61004143 MS.gene50221:CDS
CTCCGATTACCAACGTCAAC+AGG 0.436281 5.2:-61004145 None:intergenic
GTACTAAAATTGCTGATGAA+TGG 0.437074 5.2:+61006580 MS.gene50221:CDS
TCCGTGTTATACGTTTCATT+TGG 0.440218 5.2:+61006273 MS.gene50221:CDS
CGGTGGAGCCACGTTGGGTA+TGG 0.441130 5.2:-61003984 None:intergenic
CTCCATGTTCCATCATCTTG+AGG 0.442573 5.2:+61004213 MS.gene50221:CDS
GCAAGAGGGAATGTCAAAAT+TGG 0.442577 5.2:-61006537 None:intergenic
AAAGGGGAATATAGATTTAA+GGG 0.444531 5.2:-61006136 None:intergenic
ATATAGTAGAGCTTGTTAAG+AGG 0.445793 5.2:+61006667 MS.gene50221:CDS
GAAAGGAAAGTGTGGAGATA+AGG 0.456490 5.2:+61006401 MS.gene50221:CDS
CAGTTTCAGTTCCGCGTCTA+GGG 0.458755 5.2:+61006296 MS.gene50221:CDS
ACACTTAACTCATGATAAGC+TGG 0.461134 5.2:+61004252 MS.gene50221:CDS
CCAATAGGATAGACTGGAAA+GGG 0.462374 5.2:-61006153 None:intergenic
TTTCCCCACGAGCCACATAA+AGG 0.469804 5.2:-61006368 None:intergenic
TGGTAATCGGAGGAATATTC+CGG 0.470562 5.2:+61004156 MS.gene50221:CDS
CATACCCAACGTGGCTCCAC+CGG 0.471492 5.2:+61003985 MS.gene50221:CDS
CCGGAGCGGGAGAAAACTAT+AGG 0.479538 5.2:+61004004 MS.gene50221:CDS
TTGTCTCATTCTTCTATAGG+TGG 0.482998 5.2:+61006459 MS.gene50221:CDS
ATATGTGCAGAGAACGTGCC+AGG 0.484350 5.2:+61005958 MS.gene50221:intron
CAACGTGGCTCCACCGGAGC+GGG 0.484608 5.2:+61003991 MS.gene50221:CDS
TGAAGCTGCCATGACAAAGA+TGG 0.487883 5.2:+61004045 MS.gene50221:CDS
AGACCTTGAAGAAAATAAAA+CGG 0.493373 5.2:+61006194 MS.gene50221:CDS
TGTCATAAAGCTATTGCTAA+AGG 0.496050 5.2:+61006756 MS.gene50221:CDS
TTGTGGATGGAATTCAACTT+TGG 0.499309 5.2:+61006494 MS.gene50221:CDS
AAAGGAAAGTGTGGAGATAA+GGG 0.501812 5.2:+61006402 MS.gene50221:CDS
GGAAATTGATCGTGGGCAAG+AGG 0.503423 5.2:-61006552 None:intergenic
AAAGTGATAAGAATGTTGTT+GGG 0.504684 5.2:-61003893 None:intergenic
CTAAAGGCGGATCCTCAGAT+AGG 0.505408 5.2:+61006772 MS.gene50221:CDS
GTAGTCACTGAAGAATGGCT+TGG 0.506110 5.2:+61003917 MS.gene50221:CDS
AGGTCTAAATAAGGTACTGC+AGG 0.514647 5.2:-61006177 None:intergenic
GTCAATTTGGGCCCTAGACG+CGG 0.520780 5.2:-61006307 None:intergenic
CTCATTGGAGTGCATTTCCA+AGG 0.524444 5.2:+61006050 MS.gene50221:CDS
CTTGCACTGTGGTGAGAAGA+AGG 0.524564 5.2:-61006089 None:intergenic
CCGCTCCGGTGGAGCCACGT+TGG 0.526681 5.2:-61003990 None:intergenic
GAATTTGCATATGCTTAGCA+TGG 0.527023 5.2:-61003855 None:intergenic
GCAGGACCAATAGGATAGAC+TGG 0.531815 5.2:-61006159 None:intergenic
AATTTGCATATGCTTAGCAT+GGG 0.535578 5.2:-61003854 None:intergenic
GCGATGCCATTTCCAGGAAG+AGG 0.537171 5.2:+61003821 MS.gene50221:CDS
GTGAAAAGACCTCAAGATGA+TGG 0.537515 5.2:-61004222 None:intergenic
CGATACCTTTATGTGGCTCG+TGG 0.540484 5.2:+61006363 MS.gene50221:CDS
TATCGGCAGCGATCCAAAGC+CGG 0.543018 5.2:+61003943 MS.gene50221:CDS
CGGCGCTTCCATCTTTGTCA+TGG 0.544293 5.2:-61004053 None:intergenic
TGGAGCCACGTTGGGTATGG+TGG 0.546109 5.2:-61003981 None:intergenic
TGATCAAGAAGCTGTTCAAA+CGG 0.551251 5.2:-61004073 None:intergenic
TTGCCGGTGAATGTGATTGT+TGG 0.552279 5.2:+61004103 MS.gene50221:CDS
TAAAATTCGATACCTTTATG+TGG 0.554126 5.2:+61006356 MS.gene50221:CDS
ATATGAAGAGACGAAACTCC+TGG 0.558796 5.2:-61005976 None:intergenic
GATACCTTTATGTGGCTCGT+GGG 0.561500 5.2:+61006364 MS.gene50221:CDS
GGGTATGGTGGCGAAGCGGA+TGG 0.564607 5.2:-61003969 None:intergenic
GGGGAAACATCGAGGTTGAA+AGG 0.567051 5.2:+61006384 MS.gene50221:CDS
TACTATTAGGAAATTGATCG+TGG 0.567702 5.2:-61006560 None:intergenic
CATCGCCACAACGTGGCACA+CGG 0.570903 5.2:-61003804 None:intergenic
TCTCCGGCAATGAATATCTC+CGG 0.572594 5.2:+61003776 None:intergenic
TCACCAACAATCACATTCAC+CGG 0.574670 5.2:-61004106 None:intergenic
CGACGCCGTGTGCCACGTTG+TGG 0.574790 5.2:+61003799 MS.gene50221:CDS
ATAAGGGAATGGTGATACCT+TGG 0.583101 5.2:+61006418 MS.gene50221:CDS
CACTTAACTCATGATAAGCT+GGG 0.584246 5.2:+61004253 MS.gene50221:CDS
GACCTCAAGATGATGGAACA+TGG 0.591732 5.2:-61004215 None:intergenic
ATGGATCTTGAATGCCAAGA+GGG 0.598024 5.2:+61006693 MS.gene50221:CDS
GAAATTGATCGTGGGCAAGA+GGG 0.606801 5.2:-61006551 None:intergenic
TTCTGCGAACAACAGTTCGA+AGG 0.609443 5.2:-61006005 None:intergenic
ATACCTTTATGTGGCTCGTG+GGG 0.610118 5.2:+61006365 MS.gene50221:CDS
TGCGTCGAGGTTCCTATCTG+AGG 0.618959 5.2:-61006784 None:intergenic
ACGTATAACACGGATTCAGA+TGG 0.620334 5.2:-61006264 None:intergenic
ACCAATAGGATAGACTGGAA+AGG 0.627929 5.2:-61006154 None:intergenic
GGAGTAAAATGACGCAGACA+TGG 0.628001 5.2:-61004194 None:intergenic
GCCAAATGAAACGTATAACA+CGG 0.637753 5.2:-61006274 None:intergenic
CGTTGGGTATGGTGGCGAAG+CGG 0.643333 5.2:-61003973 None:intergenic
CTGTTGACGTTGGTAATCGG+AGG 0.645782 5.2:+61004146 MS.gene50221:CDS
ACTATTAGGAAATTGATCGT+GGG 0.647501 5.2:-61006559 None:intergenic
AGCTTCTAACTCTTGCACTG+TGG 0.650526 5.2:-61006100 None:intergenic
AAAGTGTGGAGATAAGGGAA+TGG 0.653428 5.2:+61006407 MS.gene50221:CDS
TCGAGGTTGAAAGGAAAGTG+TGG 0.653471 5.2:+61006393 MS.gene50221:CDS
CATAAAGCTATTGCTAAAGG+CGG 0.654547 5.2:+61006759 MS.gene50221:CDS
CTGCGGTGGCCTGTTGACGT+TGG 0.657872 5.2:+61004136 MS.gene50221:CDS
ATTTGCATATGCTTAGCATG+GGG 0.659532 5.2:-61003853 None:intergenic
ATGGTCCAAAGAGATGCCAC+CGG 0.660199 5.2:-61004175 None:intergenic
CCAACGTGGCTCCACCGGAG+CGG 0.682739 5.2:+61003990 MS.gene50221:CDS
CTTCGCCACCATACCCAACG+TGG 0.682758 5.2:+61003976 MS.gene50221:CDS
CAATAGGATAGACTGGAAAG+GGG 0.687084 5.2:-61006152 None:intergenic
TTGGTGATATTGAGCTGCGG+TGG 0.695483 5.2:+61004122 MS.gene50221:CDS
TATGGATCTTGAATGCCAAG+AGG 0.697563 5.2:+61006692 MS.gene50221:CDS
TGGCTCGTGGGGAAACATCG+AGG 0.698899 5.2:+61006376 MS.gene50221:CDS
AAGTTGAATTCCATCCACAA+TGG 0.708055 5.2:-61006491 None:intergenic
TAATCGGAGGAATATTCCGG+TGG 0.717176 5.2:+61004159 MS.gene50221:CDS
GAAATGGCATCGCCACAACG+TGG 0.720203 5.2:-61003811 None:intergenic
TTGTTGGTGATATTGAGCTG+CGG 0.731422 5.2:+61004119 MS.gene50221:CDS
ACTTTGAGTTGATCACACCA+AGG 0.731602 5.2:-61006435 None:intergenic
TGTCACTGATAAATGCGTCG+AGG 0.739450 5.2:-61006797 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATATTTTACATTTAAAAT+TGG - chr5.2:61004368-61004387 None:intergenic 10.0%
!! ATACAATTTAACACAAATAT+TGG - chr5.2:61005806-61005825 None:intergenic 15.0%
!! ATATATTTAACATCTCTAAT+TGG - chr5.2:61005634-61005653 None:intergenic 15.0%
!! TAAGGAAAAAAAAAAAATGA+AGG - chr5.2:61005681-61005700 None:intergenic 15.0%
!!! TTTTTTTTTTCCTTAGAAAA+GGG + chr5.2:61005686-61005705 MS.gene50221:intron 15.0%
!!! TTTTTTTTTTTCCTTAGAAA+AGG + chr5.2:61005685-61005704 MS.gene50221:intron 15.0%
!! AAAACCATTCAAAAACTAAA+AGG + chr5.2:61005157-61005176 MS.gene50221:intron 20.0%
!! TGGAAAAACTAAAAACTTAA+AGG + chr5.2:61005217-61005236 MS.gene50221:intron 20.0%
!! TGTACAATTGCATTAATATT+CGG - chr5.2:61005924-61005943 None:intergenic 20.0%
!! TTGAAAATAATTCTAATCCA+CGG - chr5.2:61004835-61004854 None:intergenic 20.0%
!!! AAACTATAGGTAATTTTCAT+CGG + chr5.2:61004017-61004036 MS.gene50221:CDS 20.0%
!!! AGTTTTCTACAAAGATTAAA+AGG + chr5.2:61005011-61005030 MS.gene50221:intron 20.0%
!!! GTACTTTTAACTTGATTTTA+GGG + chr5.2:61005432-61005451 MS.gene50221:intron 20.0%
!!! GTTACGACTTTATTTATATT+TGG + chr5.2:61004511-61004530 MS.gene50221:intron 20.0%
!!! TGTACTTTTAACTTGATTTT+AGG + chr5.2:61005431-61005450 MS.gene50221:intron 20.0%
!!! TTTTTTTTTCCTTAGAAAAG+GGG + chr5.2:61005687-61005706 MS.gene50221:intron 20.0%
! AAAAGTGATAAGAATGTTGT+TGG - chr5.2:61003897-61003916 None:intergenic 25.0%
! AAAGGGGAATATAGATTTAA+GGG - chr5.2:61006139-61006158 None:intergenic 25.0%
! AAAGTGATAAGAATGTTGTT+GGG - chr5.2:61003896-61003915 None:intergenic 25.0%
! AACATTAAGACTTATGAGTA+GGG - chr5.2:61004734-61004753 None:intergenic 25.0%
! AACTAAAAGTAACTGTATGT+TGG - chr5.2:61005111-61005130 None:intergenic 25.0%
! AATACCTTAATCATGCATTA+TGG + chr5.2:61005777-61005796 MS.gene50221:intron 25.0%
! ACTAAAAGTAACTGTATGTT+GGG - chr5.2:61005110-61005129 None:intergenic 25.0%
! AGACCTTGAAGAAAATAAAA+CGG + chr5.2:61006194-61006213 MS.gene50221:CDS 25.0%
! CAAACTATTAATTAACTAGC+AGG - chr5.2:61004482-61004501 None:intergenic 25.0%
! CTACAAAGATTAAAAGGTAA+AGG + chr5.2:61005017-61005036 MS.gene50221:intron 25.0%
! GAAACTTAAAGGATGAATTT+GGG - chr5.2:61005081-61005100 None:intergenic 25.0%
! GGGAAAAACTAAAAACTTAA+AGG - chr5.2:61005061-61005080 None:intergenic 25.0%
! TAAAATTCGATACCTTTATG+TGG + chr5.2:61006356-61006375 MS.gene50221:CDS 25.0%
! TAACATTAAGACTTATGAGT+AGG - chr5.2:61004735-61004754 None:intergenic 25.0%
! TGAAACTTAAAGGATGAATT+TGG - chr5.2:61005082-61005101 None:intergenic 25.0%
! TTCAATGATTTCGTCAATTT+GGG - chr5.2:61006322-61006341 None:intergenic 25.0%
!! ATTTAAAATTGGAATCGTCT+CGG - chr5.2:61004357-61004376 None:intergenic 25.0%
!! TTTTCTTCAAGGTCTAAATA+AGG - chr5.2:61006189-61006208 None:intergenic 25.0%
!!! ATTAGTTGATGTTTTACCTT+TGG - chr5.2:61005261-61005280 None:intergenic 25.0%
!!! TCAGCAATTTTAGTACTATT+AGG - chr5.2:61006576-61006595 None:intergenic 25.0%
!!! TGAATGGTTTTGAAACTTAA+AGG - chr5.2:61005148-61005167 None:intergenic 25.0%
AAAAACTAAAAGGACCTCTT+TGG + chr5.2:61005167-61005186 MS.gene50221:intron 30.0%
AAAACTAAAAGGACCTCTTT+GGG + chr5.2:61005168-61005187 MS.gene50221:intron 30.0%
AAAAGTGACATTCATGTAGT+TGG + chr5.2:61004301-61004320 MS.gene50221:intron 30.0%
AATTTGCATATGCTTAGCAT+GGG - chr5.2:61003857-61003876 None:intergenic 30.0%
ACATTAAGACTTATGAGTAG+GGG - chr5.2:61004733-61004752 None:intergenic 30.0%
ACGATAAATAAGTGTGGTTA+GGG + chr5.2:61004930-61004949 MS.gene50221:intron 30.0%
ACTATTAGGAAATTGATCGT+GGG - chr5.2:61006562-61006581 None:intergenic 30.0%
ATAGCCACGACTATATAAAA+TGG + chr5.2:61006229-61006248 MS.gene50221:CDS 30.0%
ATTGCTGATGAATGGAAAAA+TGG + chr5.2:61006588-61006607 MS.gene50221:CDS 30.0%
CGATTAGCAATATATAAAGC+GGG - chr5.2:61004978-61004997 None:intergenic 30.0%
CTTCAATGATTTCGTCAATT+TGG - chr5.2:61006323-61006342 None:intergenic 30.0%
GAAAGGGGAATATAGATTTA+AGG - chr5.2:61006140-61006159 None:intergenic 30.0%
GAACAAATTCGGTCAAATTT+GGG - chr5.2:61004633-61004652 None:intergenic 30.0%
GATCCAAACTTGAACAAATT+CGG - chr5.2:61004644-61004663 None:intergenic 30.0%
GCGATTAGCAATATATAAAG+CGG - chr5.2:61004979-61004998 None:intergenic 30.0%
GTACTAAAATTGCTGATGAA+TGG + chr5.2:61006580-61006599 MS.gene50221:CDS 30.0%
GTTACCATAATGCATGATTA+AGG - chr5.2:61005784-61005803 None:intergenic 30.0%
TAAAGGTCAAATGCATCATT+AGG + chr5.2:61005034-61005053 MS.gene50221:intron 30.0%
TACGATAAATAAGTGTGGTT+AGG + chr5.2:61004929-61004948 MS.gene50221:intron 30.0%
TACTAAGCATGTCAAGTTTA+AGG + chr5.2:61005740-61005759 MS.gene50221:intron 30.0%
TACTATTAGGAAATTGATCG+TGG - chr5.2:61006563-61006582 None:intergenic 30.0%
TACTCAAAGTAACTGTATGT+TGG - chr5.2:61004896-61004915 None:intergenic 30.0%
TAGTTAGCAAGAGAAAGAAA+TGG - chr5.2:61005858-61005877 None:intergenic 30.0%
TGAACAAATTCGGTCAAATT+TGG - chr5.2:61004634-61004653 None:intergenic 30.0%
TGTCATAAAGCTATTGCTAA+AGG + chr5.2:61006756-61006775 MS.gene50221:CDS 30.0%
TTGCTGATGAATGGAAAAAT+GGG + chr5.2:61006589-61006608 MS.gene50221:CDS 30.0%
TTTGGTACGATAAATAAGTG+TGG + chr5.2:61004924-61004943 MS.gene50221:intron 30.0%
! ACAGTTACTTTGAGTAGTAA+TGG + chr5.2:61004900-61004919 MS.gene50221:intron 30.0%
! GAAACTTAAAGGACGATTTT+TGG + chr5.2:61005197-61005216 MS.gene50221:intron 30.0%
! GAAGGAACTATATTTGTTAC+TGG - chr5.2:61005663-61005682 None:intergenic 30.0%
! TAATAGTTTTTGATCCAGAG+TGG + chr5.2:61005277-61005296 MS.gene50221:intron 30.0%
!! ACTTTGAGTAGTAATGGATT+TGG + chr5.2:61004906-61004925 MS.gene50221:intron 30.0%
!! ATATAGTAGAGCTTGTTAAG+AGG + chr5.2:61006667-61006686 MS.gene50221:CDS 30.0%
!! ATTCTTCTATAGGTGGATTT+TGG + chr5.2:61006466-61006485 MS.gene50221:CDS 30.0%
!! TCAAATTTGGGTTGGATAAT+CGG - chr5.2:61004621-61004640 None:intergenic 30.0%
!!! ACAAAATTTTAAGTTGACCG+TGG + chr5.2:61004815-61004834 MS.gene50221:intron 30.0%
!!! ACTTGATTTTAGGGTTTTCT+AGG + chr5.2:61005441-61005460 MS.gene50221:intron 30.0%
!!! AGGTCCTTTTAGTTTTTGAA+TGG - chr5.2:61005164-61005183 None:intergenic 30.0%
!!! TTGCCGTTTTATTTTCTTCA+AGG - chr5.2:61006200-61006219 None:intergenic 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG + chr5.2:61005186-61005205 MS.gene50221:intron 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG - chr5.2:61005205-61005186 None:intergenic 30.0%
AAATTCGGTCAAATTTGGGT+TGG - chr5.2:61004629-61004648 None:intergenic 35.0%
AAGTTGAATTCCATCCACAA+TGG - chr5.2:61006494-61006513 None:intergenic 35.0%
AAGTTTCAAAAGTCCCAAAG+AGG - chr5.2:61005184-61005203 None:intergenic 35.0%
ACACTTAACTCATGATAAGC+TGG + chr5.2:61004252-61004271 MS.gene50221:CDS 35.0%
AGATAGAGCAAGAGAACTTA+AGG + chr5.2:61006728-61006747 MS.gene50221:CDS 35.0%
ATCAGTACAAGTGTGGTTAT+TGG - chr5.2:61004420-61004439 None:intergenic 35.0%
ATCGTTCGATTGTTATCATG+TGG + chr5.2:61005512-61005531 MS.gene50221:intron 35.0%
ATGGAATCAACGAATTCACA+TGG + chr5.2:61005540-61005559 MS.gene50221:intron 35.0%
ATTTGCATATGCTTAGCATG+GGG - chr5.2:61003856-61003875 None:intergenic 35.0%
CACTTAACTCATGATAAGCT+GGG + chr5.2:61004253-61004272 MS.gene50221:CDS 35.0%
CATAAAGCTATTGCTAAAGG+CGG + chr5.2:61006759-61006778 MS.gene50221:CDS 35.0%
CGATAAATAAGTGTGGTTAG+GGG + chr5.2:61004931-61004950 MS.gene50221:intron 35.0%
CTAATGATGCATTTGACCAA+AGG + chr5.2:61005242-61005261 MS.gene50221:intron 35.0%
CTTTGGTCAAATGCATCATT+AGG - chr5.2:61005244-61005263 None:intergenic 35.0%
GAATTTGCATATGCTTAGCA+TGG - chr5.2:61003858-61003877 None:intergenic 35.0%
GCCAAATGAAACGTATAACA+CGG - chr5.2:61006277-61006296 None:intergenic 35.0%
GTGTTGTCTCATTCTTCTAT+AGG + chr5.2:61006456-61006475 MS.gene50221:CDS 35.0%
TCCGTGTTATACGTTTCATT+TGG + chr5.2:61006273-61006292 MS.gene50221:CDS 35.0%
TCGTAAACTTCCAAACAACT+CGG - chr5.2:61004690-61004709 None:intergenic 35.0%
TGATAAGCTGGGTAAGAAAT+TGG + chr5.2:61004264-61004283 MS.gene50221:intron 35.0%
TGATCAAGAAGCTGTTCAAA+CGG - chr5.2:61004076-61004095 None:intergenic 35.0%
TGGAATCAACGAATTCACAT+GGG + chr5.2:61005541-61005560 MS.gene50221:intron 35.0%
TTGTCTCATTCTTCTATAGG+TGG + chr5.2:61006459-61006478 MS.gene50221:CDS 35.0%
TTGTGGATGGAATTCAACTT+TGG + chr5.2:61006494-61006513 MS.gene50221:CDS 35.0%
! AAAGGAAAGTGTGGAGATAA+GGG + chr5.2:61006402-61006421 MS.gene50221:CDS 35.0%
! AGTTTGTGATTGAGAGTGTA+AGG + chr5.2:61005389-61005408 MS.gene50221:intron 35.0%
! CTCTAATTTTCTTTCCCTCT+TGG - chr5.2:61006710-61006729 None:intergenic 35.0%
! CTTTTGTAGTCACTGAAGAA+TGG + chr5.2:61003912-61003931 MS.gene50221:CDS 35.0%
! TGACCGAATTTGTTCAAGTT+TGG + chr5.2:61004638-61004657 MS.gene50221:intron 35.0%
! TTGTTATCATGTGGCATTGA+TGG + chr5.2:61005521-61005540 MS.gene50221:intron 35.0%
! TTTTCCTTACCCCTTTTCTA+AGG - chr5.2:61005699-61005718 None:intergenic 35.0%
! TTTTCCTTAGAAAAGGGGTA+AGG + chr5.2:61005692-61005711 MS.gene50221:intron 35.0%
!! AGAGCTTGTTAAGAGGTTTA+TGG + chr5.2:61006674-61006693 MS.gene50221:CDS 35.0%
!! CTAGCCATTTTATATAGTCG+TGG - chr5.2:61006236-61006255 None:intergenic 35.0%
!! GAGAAGAAGGTAATTTGCTT+TGG - chr5.2:61006079-61006098 None:intergenic 35.0%
!! GTAATTTGCTTTGGTAACCT+TGG - chr5.2:61006070-61006089 None:intergenic 35.0%
!!! ACTTTGGACACTCTTTTTTC+TGG + chr5.2:61006510-61006529 MS.gene50221:CDS 35.0%
!!! TGATTTTAGGGTTTTCTAGG+TGG + chr5.2:61005444-61005463 MS.gene50221:intron 35.0%
AAAGTGTGGAGATAAGGGAA+TGG + chr5.2:61006407-61006426 MS.gene50221:CDS 40.0%
ACCAATAGGATAGACTGGAA+AGG - chr5.2:61006157-61006176 None:intergenic 40.0%
ACGTATAACACGGATTCAGA+TGG - chr5.2:61006267-61006286 None:intergenic 40.0%
ATAAGGGAATGGTGATACCT+TGG + chr5.2:61006418-61006437 MS.gene50221:CDS 40.0%
ATATGAAGAGACGAAACTCC+TGG - chr5.2:61005979-61005998 None:intergenic 40.0%
ATGGATCTTGAATGCCAAGA+GGG + chr5.2:61006693-61006712 MS.gene50221:CDS 40.0%
CAATAGGATAGACTGGAAAG+GGG - chr5.2:61006155-61006174 None:intergenic 40.0%
CCAATAGGATAGACTGGAAA+GGG - chr5.2:61006156-61006175 None:intergenic 40.0%
CGTAAACTTCCAAACAACTC+GGG - chr5.2:61004689-61004708 None:intergenic 40.0%
CTGATGAATGGAAAAATGGG+TGG + chr5.2:61006592-61006611 MS.gene50221:CDS 40.0%
CTGCATCAAATTAACGATCG+TGG + chr5.2:61004447-61004466 MS.gene50221:intron 40.0%
GCAAGAGGGAATGTCAAAAT+TGG - chr5.2:61006540-61006559 None:intergenic 40.0%
GCTAATATCTCGAGTGACTA+CGG - chr5.2:61005596-61005615 None:intergenic 40.0%
GTGAAAAGACCTCAAGATGA+TGG - chr5.2:61004225-61004244 None:intergenic 40.0%
GTGACATTCATGTAGTTGGT+TGG + chr5.2:61004305-61004324 MS.gene50221:intron 40.0%
TATGGATCTTGAATGCCAAG+AGG + chr5.2:61006692-61006711 MS.gene50221:CDS 40.0%
TCAAAACATGCAGCTCTCAT+TGG + chr5.2:61006035-61006054 MS.gene50221:CDS 40.0%
TCACCAACAATCACATTCAC+CGG - chr5.2:61004109-61004128 None:intergenic 40.0%
TCATGCAATCAGTACAAGTG+TGG - chr5.2:61004427-61004446 None:intergenic 40.0%
TGAATGGAAAAATGGGTGGA+AGG + chr5.2:61006596-61006615 MS.gene50221:CDS 40.0%
TGGTAATCGGAGGAATATTC+CGG + chr5.2:61004156-61004175 MS.gene50221:CDS 40.0%
TTTCGACGAGTTGTTCGTAT+TGG - chr5.2:61004666-61004685 None:intergenic 40.0%
! AATGAGAGCTGCATGTTTTG+AGG - chr5.2:61006036-61006055 None:intergenic 40.0%
! GAAAGGAAAGTGTGGAGATA+AGG + chr5.2:61006401-61006420 MS.gene50221:CDS 40.0%
! TCTTGATCAACTTGAGTTGC+CGG + chr5.2:61004087-61004106 MS.gene50221:CDS 40.0%
! TGTTGGGTTTTCGTGAGATT+AGG - chr5.2:61003880-61003899 None:intergenic 40.0%
!! ACTTTGAGTTGATCACACCA+AGG - chr5.2:61006438-61006457 None:intergenic 40.0%
!! AGGTCTAAATAAGGTACTGC+AGG - chr5.2:61006180-61006199 None:intergenic 40.0%
!! GAAGAATGGCTTGGCTTTAT+CGG + chr5.2:61003926-61003945 MS.gene50221:CDS 40.0%
!! TTGTTGGTGATATTGAGCTG+CGG + chr5.2:61004119-61004138 MS.gene50221:CDS 40.0%
AAGTGTGGTTAGGGGTTTCT+TGG + chr5.2:61004939-61004958 MS.gene50221:intron 45.0%
ACCCACAATCTCGTAACTAG+GGG + chr5.2:61004567-61004586 MS.gene50221:intron 45.0%
ACCCCTAGTTACGAGATTGT+GGG - chr5.2:61004571-61004590 None:intergenic 45.0%
AGCTTCTAACTCTTGCACTG+TGG - chr5.2:61006103-61006122 None:intergenic 45.0%
AGTGGATCTAGATCGAAGGT+CGG + chr5.2:61005295-61005314 MS.gene50221:intron 45.0%
ATACCTTTATGTGGCTCGTG+GGG + chr5.2:61006365-61006384 MS.gene50221:CDS 45.0%
ATATTCCGGTGGCATCTCTT+TGG + chr5.2:61004170-61004189 MS.gene50221:CDS 45.0%
ATGTGTCCTCTTCCTGGAAA+TGG - chr5.2:61003830-61003849 None:intergenic 45.0%
CACCCACAATCTCGTAACTA+GGG + chr5.2:61004566-61004585 MS.gene50221:intron 45.0%
CCCTTTCCAGTCTATCCTAT+TGG + chr5.2:61006153-61006172 MS.gene50221:CDS 45.0%
CTCATTGGAGTGCATTTCCA+AGG + chr5.2:61006050-61006069 MS.gene50221:CDS 45.0%
CTCCATGTTCCATCATCTTG+AGG + chr5.2:61004213-61004232 MS.gene50221:CDS 45.0%
GAAATTGATCGTGGGCAAGA+GGG - chr5.2:61006554-61006573 None:intergenic 45.0%
GATACCTTTATGTGGCTCGT+GGG + chr5.2:61006364-61006383 MS.gene50221:CDS 45.0%
GGAGTAAAATGACGCAGACA+TGG - chr5.2:61004197-61004216 None:intergenic 45.0%
GGATCTCGATCCAACAATCA+TGG - chr5.2:61004336-61004355 None:intergenic 45.0%
GGGTTGGATAATCGGTTGAA+CGG - chr5.2:61004613-61004632 None:intergenic 45.0%
GTAGTCACTGAAGAATGGCT+TGG + chr5.2:61003917-61003936 MS.gene50221:CDS 45.0%
GTTAGGGGTTTCTTGGTTAG+AGG + chr5.2:61004946-61004965 MS.gene50221:intron 45.0%
TAATCGGAGGAATATTCCGG+TGG + chr5.2:61004159-61004178 MS.gene50221:CDS 45.0%
TCACCCACAATCTCGTAACT+AGG + chr5.2:61004565-61004584 MS.gene50221:intron 45.0%
TCGAGGTTGAAAGGAAAGTG+TGG + chr5.2:61006393-61006412 MS.gene50221:CDS 45.0%
TGAAGCTGCCATGACAAAGA+TGG + chr5.2:61004045-61004064 MS.gene50221:CDS 45.0%
TGGAACCTACCAAACCCTTT+GGG + chr5.2:61005464-61005483 MS.gene50221:intron 45.0%
TGTCACTGATAAATGCGTCG+AGG - chr5.2:61006800-61006819 None:intergenic 45.0%
TTCACATGGGTGTGCTCTTA+TGG + chr5.2:61005554-61005573 MS.gene50221:intron 45.0%
TTCTGCGAACAACAGTTCGA+AGG - chr5.2:61006008-61006027 None:intergenic 45.0%
TTGCCGGTGAATGTGATTGT+TGG + chr5.2:61004103-61004122 MS.gene50221:CDS 45.0%
! AACAACCCAAAGGGTTTGGT+AGG - chr5.2:61005472-61005491 None:intergenic 45.0%
! GTTGGCTCAACCATGATTGT+TGG + chr5.2:61004323-61004342 MS.gene50221:intron 45.0%
!! CAAACCCTTTGGGTTGTTCT+CGG + chr5.2:61005474-61005493 MS.gene50221:intron 45.0%
!! GACCTCAAGATGATGGAACA+TGG - chr5.2:61004218-61004237 None:intergenic 45.0%
!! GAGTAGGGGTATTCACTAGT+CGG - chr5.2:61004719-61004738 None:intergenic 45.0%
!! TAAGGTACTGCAGGACCAAT+AGG - chr5.2:61006171-61006190 None:intergenic 45.0%
!!! GATTTTGGAGCCATTGTGGA+TGG + chr5.2:61006481-61006500 MS.gene50221:CDS 45.0%
ATATGTGCAGAGAACGTGCC+AGG + chr5.2:61005958-61005977 MS.gene50221:intron 50.0%
ATCTAGATCGAAGGTCGGAG+TGG + chr5.2:61005300-61005319 MS.gene50221:intron 50.0%
ATGGTCCAAAGAGATGCCAC+CGG - chr5.2:61004178-61004197 None:intergenic 50.0%
CACCCCTAGTTACGAGATTG+TGG - chr5.2:61004572-61004591 None:intergenic 50.0%
CAGTTTCAGTTCCGCGTCTA+GGG + chr5.2:61006296-61006315 MS.gene50221:CDS 50.0%
CCAGAGTGGATCTAGATCGA+AGG + chr5.2:61005291-61005310 MS.gene50221:intron 50.0%
CCTTCGATCTAGATCCACTC+TGG - chr5.2:61005294-61005313 None:intergenic 50.0%
CGAGAACAACCCAAAGGGTT+TGG - chr5.2:61005476-61005495 None:intergenic 50.0%
CGATACCTTTATGTGGCTCG+TGG + chr5.2:61006363-61006382 MS.gene50221:CDS 50.0%
CTAAAGGCGGATCCTCAGAT+AGG + chr5.2:61006772-61006791 MS.gene50221:CDS 50.0%
CTCCGATTACCAACGTCAAC+AGG - chr5.2:61004148-61004167 None:intergenic 50.0%
CTTGCACTGTGGTGAGAAGA+AGG - chr5.2:61006092-61006111 None:intergenic 50.0%
GCAGGACCAATAGGATAGAC+TGG - chr5.2:61006162-61006181 None:intergenic 50.0%
GGAAATTGATCGTGGGCAAG+AGG - chr5.2:61006555-61006574 None:intergenic 50.0%
GGGGAAACATCGAGGTTGAA+AGG + chr5.2:61006384-61006403 MS.gene50221:CDS 50.0%
GTGGAACCTACCAAACCCTT+TGG + chr5.2:61005463-61005482 MS.gene50221:intron 50.0%
GTTGTTCTCGGCGTGATATG+TGG + chr5.2:61005486-61005505 MS.gene50221:intron 50.0%
TCGTCGAAACCCGAGTTGTT+TGG + chr5.2:61004677-61004696 MS.gene50221:intron 50.0%
TTTCCCCACGAGCCACATAA+AGG - chr5.2:61006371-61006390 None:intergenic 50.0%
! CCTATAGTTTTCTCCCGCTC+CGG - chr5.2:61004007-61004026 None:intergenic 50.0%
! TTGGTGATATTGAGCTGCGG+TGG + chr5.2:61004122-61004141 MS.gene50221:CDS 50.0%
!! CTCGTAACTAGGGGTGTTCA+CGG + chr5.2:61004576-61004595 MS.gene50221:intron 50.0%
!! CTGTTGACGTTGGTAATCGG+AGG + chr5.2:61004146-61004165 MS.gene50221:CDS 50.0%
!! GGCCTGTTGACGTTGGTAAT+CGG + chr5.2:61004143-61004162 MS.gene50221:CDS 50.0%
!! TCGTAACTAGGGGTGTTCAC+GGG + chr5.2:61004577-61004596 MS.gene50221:intron 50.0%
!!! GGTGGATTTTGGAGCCATTG+TGG + chr5.2:61006477-61006496 MS.gene50221:CDS 50.0%
ACAGAGGCAGGTCCTCATAG+CGG + chr5.2:61005333-61005352 MS.gene50221:intron 55.0%
CACGCCGAGAACAACCCAAA+GGG - chr5.2:61005481-61005500 None:intergenic 55.0%
CCGGAGCGGGAGAAAACTAT+AGG + chr5.2:61004004-61004023 MS.gene50221:CDS 55.0%
CGGCGCTTCCATCTTTGTCA+TGG - chr5.2:61004056-61004075 None:intergenic 55.0%
GAAATGGCATCGCCACAACG+TGG - chr5.2:61003814-61003833 None:intergenic 55.0%
GCAGTTTCAGTTCCGCGTCT+AGG + chr5.2:61006295-61006314 MS.gene50221:CDS 55.0%
GTCAATTTGGGCCCTAGACG+CGG - chr5.2:61006310-61006329 None:intergenic 55.0%
TAGATCGAAGGTCGGAGTGG+TGG + chr5.2:61005303-61005322 MS.gene50221:intron 55.0%
TATCGGCAGCGATCCAAAGC+CGG + chr5.2:61003943-61003962 MS.gene50221:CDS 55.0%
TCACGCCGAGAACAACCCAA+AGG - chr5.2:61005482-61005501 None:intergenic 55.0%
TGCGTCGAGGTTCCTATCTG+AGG - chr5.2:61006787-61006806 None:intergenic 55.0%
! AAGCGGATGGATTCCGGCTT+TGG - chr5.2:61003959-61003978 None:intergenic 55.0%
! ATAGTTTTCTCCCGCTCCGG+TGG - chr5.2:61004004-61004023 None:intergenic 55.0%
! GCGATGCCATTTCCAGGAAG+AGG + chr5.2:61003821-61003840 MS.gene50221:CDS 55.0%
! GTTGTGGCGATGCCATTTCC+AGG + chr5.2:61003815-61003834 MS.gene50221:CDS 55.0%
!! GGGTTGATGTGTCCTCTTCC+TGG - chr5.2:61003836-61003855 None:intergenic 55.0%
AGAGGCAGGTCCTCATAGCG+GGG + chr5.2:61005335-61005354 MS.gene50221:intron 60.0%
CAGAGGCAGGTCCTCATAGC+GGG + chr5.2:61005334-61005353 MS.gene50221:intron 60.0%
CATACCCAACGTGGCTCCAC+CGG + chr5.2:61003985-61004004 MS.gene50221:CDS 60.0%
CATCGCCACAACGTGGCACA+CGG - chr5.2:61003807-61003826 None:intergenic 60.0%
CTTCGCCACCATACCCAACG+TGG + chr5.2:61003976-61003995 MS.gene50221:CDS 60.0%
TGGAGCCACGTTGGGTATGG+TGG - chr5.2:61003984-61004003 None:intergenic 60.0%
TGGCTCGTGGGGAAACATCG+AGG + chr5.2:61006376-61006395 MS.gene50221:CDS 60.0%
! CGTTGGGTATGGTGGCGAAG+CGG - chr5.2:61003976-61003995 None:intergenic 60.0%
! GAGTGGTGGAAGCACGACAG+AGG + chr5.2:61005317-61005336 MS.gene50221:intron 60.0%
! GTGGCGAAGCGGATGGATTC+CGG - chr5.2:61003965-61003984 None:intergenic 60.0%
!! CTAGGGGTGTTCACGGGTCT+AGG + chr5.2:61004583-61004602 MS.gene50221:intron 60.0%
ACACCCTCTCCCCCGCTATG+AGG - chr5.2:61005348-61005367 None:intergenic 65.0%
CGGTGGAGCCACGTTGGGTA+TGG - chr5.2:61003987-61004006 None:intergenic 65.0%
CTGCGGTGGCCTGTTGACGT+TGG + chr5.2:61004136-61004155 MS.gene50221:CDS 65.0%
GAGGCAGGTCCTCATAGCGG+GGG + chr5.2:61005336-61005355 MS.gene50221:intron 65.0%
! AGGTCCTCATAGCGGGGGAG+AGG + chr5.2:61005341-61005360 MS.gene50221:intron 65.0%
! GGGTATGGTGGCGAAGCGGA+TGG - chr5.2:61003972-61003991 None:intergenic 65.0%
! GGTCCTCATAGCGGGGGAGA+GGG + chr5.2:61005342-61005361 MS.gene50221:intron 65.0%
! GGTGGAAGCACGACAGAGGC+AGG + chr5.2:61005321-61005340 MS.gene50221:intron 65.0%
AACGTGGCACACGGCGTCGC+CGG - chr5.2:61003798-61003817 None:intergenic 70.0%
CAACGTGGCTCCACCGGAGC+GGG + chr5.2:61003991-61004010 MS.gene50221:CDS 70.0%
CCAACGTGGCTCCACCGGAG+CGG + chr5.2:61003990-61004009 MS.gene50221:CDS 70.0%
CGACGCCGTGTGCCACGTTG+TGG + chr5.2:61003799-61003818 MS.gene50221:CDS 70.0%
CGCTCCGGTGGAGCCACGTT+GGG - chr5.2:61003992-61004011 None:intergenic 70.0%
CCGCTCCGGTGGAGCCACGT+TGG - chr5.2:61003993-61004012 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 61003785 61006830 61003785 ID=MS.gene50221
chr5.2 mRNA 61003785 61006830 61003785 ID=MS.gene50221.t1;Parent=MS.gene50221
chr5.2 exon 61003785 61004274 61003785 ID=MS.gene50221.t1.exon1;Parent=MS.gene50221.t1
chr5.2 CDS 61003785 61004274 61003785 ID=cds.MS.gene50221.t1;Parent=MS.gene50221.t1
chr5.2 exon 61005968 61006830 61005968 ID=MS.gene50221.t1.exon2;Parent=MS.gene50221.t1
chr5.2 CDS 61005968 61006830 61005968 ID=cds.MS.gene50221.t1;Parent=MS.gene50221.t1
Gene Sequence

>MS.gene50221

ATGAATATCTCCGGCGACGCCGTGTGCCACGTTGTGGCGATGCCATTTCCAGGAAGAGGACACATCAACCCCATGCTAAGCATATGCAAATTCCTAATCTCACGAAAACCCAACAACATTCTTATCACTTTTGTAGTCACTGAAGAATGGCTTGGCTTTATCGGCAGCGATCCAAAGCCGGAATCCATCCGCTTCGCCACCATACCCAACGTGGCTCCACCGGAGCGGGAGAAAACTATAGGTAATTTTCATCGGTTTTATGAAGCTGCCATGACAAAGATGGAAGCGCCGTTTGAACAGCTTCTTGATCAACTTGAGTTGCCGGTGAATGTGATTGTTGGTGATATTGAGCTGCGGTGGCCTGTTGACGTTGGTAATCGGAGGAATATTCCGGTGGCATCTCTTTGGACCATGTCTGCGTCATTTTACTCCATGTTCCATCATCTTGAGGTCTTTTCACGTCATCAACACTTAACTCATGATAAGCTGGGTAAGAAATTGGAATTTATGTAGTAAAAAAGTGACATTCATGTAGTTGGTTGGCTCAACCATGATTGTTGGATCGAGATCCGAGACGATTCCAATTTTAAATGTAAAATATTGAGTTTGAAAGTTGAACATCTGATCTCGATCCAATAACCACACTTGTACTGATTGCATGACTGCATCAAATTAACGATCGTGGTCAATCTGTCCTGCTAGTTAATTAATAGTTTGATAATTTTAGTTACGACTTTATTTATATTTGGAGAAAAAAAACATAAATTTAAATAATATGCATCACCCACAATCTCGTAACTAGGGGTGTTCACGGGTCTAGGTGATCCGTTCAACCGATTATCCAACCCAAATTTGACCGAATTTGTTCAAGTTTGGATCCAATACGAACAACTCGTCGAAACCCGAGTTGTTTGGAAGTTTACGAGTTTGTCCGACTAGTGAATACCCCTACTCATAAGTCTTAATGTTATAGTTAAAAATGTTTAACTTAAGTCATATGATTTGTGATTTTAATTTTTGTTGACAGCATACAAAATTTTAAGTTGACCGTGGATTAGAATTATTTTCAAAAAAGATTCTATTCTCATTTTAAAATTCTATAATTATTCCAACATACAGTTACTTTGAGTAGTAATGGATTTGGTACGATAAATAAGTGTGGTTAGGGGTTTCTTGGTTAGAGGAGACATCCCGCTTTATATATTGCTAATCGCTATTATCTAACAAGTTTTCTACAAAGATTAAAAGGTAAAGGTCAAATGCATCATTAGGTCCTTTAAGTTTTTAGTTTTTCCCAAATTCATCCTTTAAGTTTCAAAAGTCCCAACATACAGTTACTTTTAGTTTTTCCCAAATTCATCCTTTAAGTTTCAAAACCATTCAAAAACTAAAAGGACCTCTTTGGGACTTTTGAAACTTAAAGGACGATTTTTGGAAAAACTAAAAACTTAAAGGACCTAATGATGCATTTGACCAAAGGTAAAACATCAACTAATAGTTTTTGATCCAGAGTGGATCTAGATCGAAGGTCGGAGTGGTGGAAGCACGACAGAGGCAGGTCCTCATAGCGGGGGAGAGGGTGTACTTGCAATCACTATCAAGTTAGTTTGTGATTGAGAGTGTAAGGTTTTAGTATTTAGAGAACGTGTACTTTTAACTTGATTTTAGGGTTTTCTAGGTGGAACCTACCAAACCCTTTGGGTTGTTCTCGGCGTGATATGTGGATCATCGTTCGATTGTTATCATGTGGCATTGATGGAATCAACGAATTCACATGGGTGTGCTCTTATGGATTCTCATAGCATACTCCGTAGTCACTCGAGATATTAGCGAATTTGACTTGAATCCAATTAGAGATGTTAAATATATATTAAACCAGTAACAAATATAGTTCCTTCATTTTTTTTTTTTCCTTAGAAAAGGGGTAAGGAAAATTTCTCTTAAGTTGTGTAAGCTACTAAGCATGTCAAGTTTAAGGCATATGTAATTTCAAATACCTTAATCATGCATTATGGTAACCAATATTTGTGTTAAATTGTATTTGAGCTATACAAAGCTTAAAGATTCATTCCATTTCTTTCTCTTGCTAACTAGTAATATGAAGTGATACTTTTATTTATTGCATATCATCATCTGCCGAATATTAATGCAATTGTACATGACTGCATATCTAATATGTGCAGAGAACGTGCCAGGAGTTTCGTCTCTTCATATAGAAGACCTTCGAACTGTTGTTCGCAGAAACAATCCTCAAAACATGCAGCTCTCATTGGAGTGCATTTCCAAGGTTACCAAAGCAAATTACCTTCTTCTCACCACAGTGCAAGAGTTAGAAGCTGAAGCAATTGATACCCTTAAATCTATATTCCCCTTTCCAGTCTATCCTATTGGTCCTGCAGTACCTTATTTAGACCTTGAAGAAAATAAAACGGCAAACACTGATCATAGCCACGACTATATAAAATGGCTAGATTCTCAACCATCTGAATCCGTGTTATACGTTTCATTTGGCAGTTTCAGTTCCGCGTCTAGGGCCCAAATTGACGAAATCATTGAAGCACTGAACAATAGTAAAATTCGATACCTTTATGTGGCTCGTGGGGAAACATCGAGGTTGAAAGGAAAGTGTGGAGATAAGGGAATGGTGATACCTTGGTGTGATCAACTCAAAGTGTTGTCTCATTCTTCTATAGGTGGATTTTGGAGCCATTGTGGATGGAATTCAACTTTGGACACTCTTTTTTCTGGTGTACCAATTTTGACATTCCCTCTTGCCCACGATCAATTTCCTAATAGTACTAAAATTGCTGATGAATGGAAAAATGGGTGGAAGGTAGAGAAATCATCAAAGTCTGAGAGTGATGTGATTTTTTCAAAAGAATATATAGTAGAGCTTGTTAAGAGGTTTATGGATCTTGAATGCCAAGAGGGAAAGAAAATTAGAGATAGAGCAAGAGAACTTAAGGTTATCTGTCATAAAGCTATTGCTAAAGGCGGATCCTCAGATAGGAACCTCGACGCATTTATCAGTGACATTTCGTCTTGA
Protein sequence

>MS.gene50221.t1

MNISGDAVCHVVAMPFPGRGHINPMLSICKFLISRKPNNILITFVVTEEWLGFIGSDPKPESIRFATIPNVAPPEREKTIGNFHRFYEAAMTKMEAPFEQLLDQLELPVNVIVGDIELRWPVDVGNRRNIPVASLWTMSASFYSMFHHLEVFSRHQHLTHDKLENVPGVSSLHIEDLRTVVRRNNPQNMQLSLECISKVTKANYLLLTTVQELEAEAIDTLKSIFPFPVYPIGPAVPYLDLEENKTANTDHSHDYIKWLDSQPSESVLYVSFGSFSSASRAQIDEIIEALNNSKIRYLYVARGETSRLKGKCGDKGMVIPWCDQLKVLSHSSIGGFWSHCGWNSTLDTLFSGVPILTFPLAHDQFPNSTKIADEWKNGWKVEKSSKSESDVIFSKEYIVELVKRFMDLECQEGKKIRDRARELKVICHKAIAKGGSSDRNLDAFISDISS