Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058180.t1 | Q43560.1 | 100 | 157 | 0 | 0 | 1 | 157 | 1 | 157 | 2.40E-82 | 314.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058180.t1 | Q43560 | 100.0 | 157 | 0 | 0 | 1 | 157 | 1 | 157 | 5.9e-85 | 314.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058180.t1 | A0A396J749 | 99.4 | 157 | 1 | 0 | 1 | 157 | 1 | 157 | 8.7e-82 | 312.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050380 | MS.gene058180 | 0.860566 | 1.89E-63 | -1.69E-46 |
| MS.gene050381 | MS.gene058180 | 0.81294 | 3.29E-51 | -1.69E-46 |
| MS.gene055124 | MS.gene058180 | 0.839336 | 1.68E-57 | -1.69E-46 |
| MS.gene055959 | MS.gene058180 | 0.821039 | 4.99E-53 | -1.69E-46 |
| MS.gene056310 | MS.gene058180 | 0.810204 | 1.29E-50 | -1.69E-46 |
| MS.gene056313 | MS.gene058180 | 0.839806 | 1.27E-57 | -1.69E-46 |
| MS.gene058093 | MS.gene058180 | 0.85877 | 6.56E-63 | -1.69E-46 |
| MS.gene058099 | MS.gene058180 | 0.806699 | 7.25E-50 | -1.69E-46 |
| MS.gene058108 | MS.gene058180 | 0.848335 | 6.54E-60 | -1.69E-46 |
| MS.gene058109 | MS.gene058180 | 0.845334 | 4.33E-59 | -1.69E-46 |
| MS.gene058170 | MS.gene058180 | 0.822651 | 2.11E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene058180 | 0.850609 | 1.52E-60 | -1.69E-46 |
| MS.gene058173 | MS.gene058180 | 0.861171 | 1.24E-63 | -1.69E-46 |
| MS.gene058174 | MS.gene058180 | 0.827706 | 1.35E-54 | -1.69E-46 |
| MS.gene058175 | MS.gene058180 | 0.855975 | 4.40E-62 | -1.69E-46 |
| MS.gene058176 | MS.gene058180 | 0.869087 | 4.03E-66 | -1.69E-46 |
| MS.gene058177 | MS.gene058180 | 0.829552 | 4.83E-55 | -1.69E-46 |
| MS.gene058179 | MS.gene058180 | 0.916979 | 9.27E-86 | -1.69E-46 |
| MS.gene058180 | MS.gene059037 | 0.915013 | 9.74E-85 | -1.69E-46 |
| MS.gene058180 | MS.gene059038 | 0.849069 | 4.10E-60 | -1.69E-46 |
| MS.gene058180 | MS.gene059044 | 0.830721 | 2.50E-55 | -1.69E-46 |
| MS.gene058180 | MS.gene059045 | 0.819207 | 1.31E-52 | -1.69E-46 |
| MS.gene058180 | MS.gene059944 | 0.810215 | 1.29E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene060205 | 0.81269 | 3.73E-51 | -1.69E-46 |
| MS.gene058180 | MS.gene061402 | -0.823189 | 1.58E-53 | -1.69E-46 |
| MS.gene058180 | MS.gene063073 | 0.803216 | 3.87E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene065465 | 0.805873 | 1.08E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene068296 | 0.871951 | 4.62E-67 | -1.69E-46 |
| MS.gene058180 | MS.gene068297 | 0.887205 | 1.75E-72 | -1.69E-46 |
| MS.gene058180 | MS.gene069431 | 0.837031 | 6.61E-57 | -1.69E-46 |
| MS.gene058180 | MS.gene071837 | 0.837758 | 4.30E-57 | -1.69E-46 |
| MS.gene058180 | MS.gene071838 | 0.917532 | 4.74E-86 | -1.69E-46 |
| MS.gene058180 | MS.gene071839 | 0.853458 | 2.36E-61 | -1.69E-46 |
| MS.gene058180 | MS.gene071842 | 0.801544 | 8.57E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene071843 | 0.85251 | 4.40E-61 | -1.69E-46 |
| MS.gene058180 | MS.gene071844 | 0.820299 | 7.38E-53 | -1.69E-46 |
| MS.gene058180 | MS.gene071942 | 0.807071 | 6.05E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene072806 | 0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene08407 | 0.800688 | 1.28E-48 | -1.69E-46 |
| MS.gene058180 | MS.gene21577 | 0.800188 | 1.62E-48 | -1.69E-46 |
| MS.gene058180 | MS.gene21757 | 0.842947 | 1.89E-58 | -1.69E-46 |
| MS.gene058180 | MS.gene21758 | 0.852301 | 5.05E-61 | -1.69E-46 |
| MS.gene058180 | MS.gene21772 | 0.837148 | 6.17E-57 | -1.69E-46 |
| MS.gene058180 | MS.gene21867 | 0.861454 | 1.01E-63 | -1.69E-46 |
| MS.gene058180 | MS.gene21868 | 0.838047 | 3.63E-57 | -1.69E-46 |
| MS.gene058180 | MS.gene22360 | 0.818383 | 2.02E-52 | -1.69E-46 |
| MS.gene058180 | MS.gene24974 | 0.88923 | 2.92E-73 | -1.69E-46 |
| MS.gene058180 | MS.gene26243 | 0.803813 | 2.91E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene26403 | 0.815526 | 8.84E-52 | -1.69E-46 |
| MS.gene058180 | MS.gene27550 | 0.827257 | 1.73E-54 | -1.69E-46 |
| MS.gene058180 | MS.gene27779 | 0.830994 | 2.15E-55 | -1.69E-46 |
| MS.gene058180 | MS.gene33428 | 0.825146 | 5.50E-54 | -1.69E-46 |
| MS.gene058180 | MS.gene33429 | 0.808204 | 3.47E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene33682 | 0.825645 | 4.19E-54 | -1.69E-46 |
| MS.gene058180 | MS.gene33683 | 0.808744 | 2.66E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene35105 | 0.806948 | 6.42E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene35208 | 0.815418 | 9.34E-52 | -1.69E-46 |
| MS.gene058180 | MS.gene38094 | 0.818537 | 1.86E-52 | -1.69E-46 |
| MS.gene058180 | MS.gene38095 | 0.818187 | 2.23E-52 | -1.69E-46 |
| MS.gene058180 | MS.gene38097 | 0.837698 | 4.46E-57 | -1.69E-46 |
| MS.gene058180 | MS.gene38155 | 0.809583 | 1.76E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene38172 | 0.826552 | 2.55E-54 | -1.69E-46 |
| MS.gene058180 | MS.gene38173 | 0.849941 | 2.34E-60 | -1.69E-46 |
| MS.gene058180 | MS.gene38174 | 0.842158 | 3.07E-58 | -1.69E-46 |
| MS.gene058180 | MS.gene39533 | 0.822491 | 2.30E-53 | -1.69E-46 |
| MS.gene058180 | MS.gene40480 | 0.80571 | 1.17E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene41015 | 0.804514 | 2.08E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene44720 | 0.803531 | 3.34E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene44721 | 0.820135 | 8.05E-53 | -1.69E-46 |
| MS.gene058180 | MS.gene44722 | 0.821856 | 3.23E-53 | -1.69E-46 |
| MS.gene058180 | MS.gene46024 | 0.845302 | 4.42E-59 | -1.69E-46 |
| MS.gene058180 | MS.gene46025 | 0.855034 | 8.27E-62 | -1.69E-46 |
| MS.gene058180 | MS.gene46027 | 0.821881 | 3.19E-53 | -1.69E-46 |
| MS.gene058180 | MS.gene46434 | 0.831286 | 1.82E-55 | -1.69E-46 |
| MS.gene058180 | MS.gene47576 | 0.805397 | 1.36E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene48183 | 0.809964 | 1.46E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene49181 | 0.800315 | 1.53E-48 | -1.69E-46 |
| MS.gene058180 | MS.gene50221 | 0.806742 | 7.10E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene50789 | 0.801503 | 8.73E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene56009 | 0.814003 | 1.92E-51 | -1.69E-46 |
| MS.gene058180 | MS.gene57718 | 0.80368 | 3.11E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene59001 | 0.825211 | 5.30E-54 | -1.69E-46 |
| MS.gene058180 | MS.gene59005 | 0.860612 | 1.83E-63 | -1.69E-46 |
| MS.gene058180 | MS.gene59006 | 0.849901 | 2.40E-60 | -1.69E-46 |
| MS.gene058180 | MS.gene59394 | 0.862414 | 5.15E-64 | -1.69E-46 |
| MS.gene058180 | MS.gene59395 | 0.876817 | 1.03E-68 | -1.69E-46 |
| MS.gene058180 | MS.gene59396 | 0.851173 | 1.05E-60 | -1.69E-46 |
| MS.gene058180 | MS.gene60477 | 0.816551 | 5.22E-52 | -1.69E-46 |
| MS.gene058180 | MS.gene61194 | 0.855927 | 4.54E-62 | -1.69E-46 |
| MS.gene058180 | MS.gene62114 | 0.849817 | 2.53E-60 | -1.69E-46 |
| MS.gene058180 | MS.gene62120 | 0.835667 | 1.47E-56 | -1.69E-46 |
| MS.gene058180 | MS.gene64372 | 0.806811 | 6.86E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene64686 | 0.841085 | 5.89E-58 | -1.69E-46 |
| MS.gene058180 | MS.gene64687 | 0.818552 | 1.85E-52 | -1.69E-46 |
| MS.gene058180 | MS.gene65865 | 0.801443 | 8.98E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene69130 | -0.802861 | 4.59E-49 | -1.69E-46 |
| MS.gene058180 | MS.gene70420 | 0.870882 | 1.04E-66 | -1.69E-46 |
| MS.gene058180 | MS.gene71525 | 0.867262 | 1.56E-65 | -1.69E-46 |
| MS.gene058180 | MS.gene75392 | 0.846554 | 2.02E-59 | -1.69E-46 |
| MS.gene058180 | MS.gene75396 | 0.865967 | 4.02E-65 | -1.69E-46 |
| MS.gene058180 | MS.gene77471 | 0.857878 | 1.21E-62 | -1.69E-46 |
| MS.gene058180 | MS.gene82245 | 0.806586 | 7.66E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene84568 | 0.861866 | 7.59E-64 | -1.69E-46 |
| MS.gene058180 | MS.gene91973 | 0.853546 | 2.22E-61 | -1.69E-46 |
| MS.gene058180 | MS.gene91976 | 0.840757 | 7.17E-58 | -1.69E-46 |
| MS.gene058180 | MS.gene91977 | 0.851221 | 1.02E-60 | -1.69E-46 |
| MS.gene058180 | MS.gene92808 | 0.80917 | 2.16E-50 | -1.69E-46 |
| MS.gene058180 | MS.gene94790 | 0.849725 | 2.69E-60 | -1.69E-46 |
| MS.gene058180 | MS.gene96173 | 0.842833 | 2.03E-58 | -1.69E-46 |
| MS.gene058180 | MS.gene97499 | 0.85228 | 5.12E-61 | -1.69E-46 |
| MS.gene058180 | MS.gene97500 | 0.862349 | 5.40E-64 | -1.69E-46 |
| MS.gene058180 | MS.gene98420 | -0.812517 | 4.07E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058180.t1 | MTR_2g035100 | 99.363 | 157 | 1 | 0 | 1 | 157 | 1 | 157 | 1.89e-109 | 308 |
| MS.gene058180.t1 | MTR_2g035105 | 98.089 | 157 | 3 | 0 | 1 | 157 | 1 | 157 | 4.99e-108 | 304 |
| MS.gene058180.t1 | MTR_2g035130 | 87.261 | 157 | 20 | 0 | 1 | 157 | 1 | 157 | 1.06e-95 | 273 |
| MS.gene058180.t1 | MTR_2g035150 | 84.713 | 157 | 24 | 0 | 1 | 157 | 1 | 157 | 1.84e-93 | 268 |
| MS.gene058180.t1 | MTR_2g035120 | 83.439 | 157 | 26 | 0 | 1 | 157 | 1 | 157 | 3.36e-93 | 267 |
| MS.gene058180.t1 | MTR_6g033450 | 71.975 | 157 | 44 | 0 | 1 | 157 | 1 | 157 | 2.94e-79 | 232 |
| MS.gene058180.t1 | MTR_4g120970 | 71.975 | 157 | 44 | 0 | 1 | 157 | 1 | 157 | 2.94e-79 | 232 |
| MS.gene058180.t1 | MTR_2g035320 | 64.968 | 157 | 55 | 0 | 1 | 157 | 1 | 157 | 1.37e-68 | 205 |
| MS.gene058180.t1 | MTR_2g035190 | 61.146 | 157 | 61 | 0 | 1 | 157 | 1 | 157 | 2.70e-65 | 196 |
| MS.gene058180.t1 | MTR_2g035210 | 60.510 | 157 | 62 | 0 | 1 | 157 | 1 | 157 | 6.10e-64 | 193 |
| MS.gene058180.t1 | MTR_2g035220 | 61.146 | 157 | 61 | 0 | 1 | 157 | 1 | 157 | 4.01e-63 | 191 |
| MS.gene058180.t1 | MTR_2g035170 | 59.873 | 157 | 63 | 0 | 1 | 157 | 1 | 157 | 3.46e-62 | 189 |
| MS.gene058180.t1 | MTR_2g435310 | 41.026 | 156 | 91 | 1 | 1 | 155 | 1 | 156 | 2.83e-39 | 130 |
| MS.gene058180.t1 | MTR_4g120760 | 40.385 | 156 | 92 | 1 | 1 | 155 | 1 | 156 | 6.60e-37 | 124 |
| MS.gene058180.t1 | MTR_4g120760 | 40.385 | 156 | 92 | 1 | 1 | 155 | 1 | 156 | 6.60e-37 | 124 |
| MS.gene058180.t1 | MTR_2g035320 | 62.500 | 96 | 36 | 0 | 62 | 157 | 27 | 122 | 3.40e-36 | 121 |
| MS.gene058180.t1 | MTR_4g120950 | 44.099 | 161 | 83 | 5 | 1 | 157 | 1 | 158 | 3.35e-32 | 112 |
| MS.gene058180.t1 | MTR_4g120940 | 61.364 | 88 | 31 | 1 | 70 | 157 | 35 | 119 | 1.36e-29 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 42 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATAACCTTTGGAATA+AGG | 0.200219 | 2.1:+57715326 | None:intergenic |
| AACGAAAGTAAGTTTCTTGA+TGG | 0.287513 | 2.1:+57715258 | None:intergenic |
| AGCTATATGCTTTAGTAATC+AGG | 0.289844 | 2.1:+57714407 | None:intergenic |
| CCCTTGATTTCCTCTTCACT+TGG | 0.329042 | 2.1:+57714488 | None:intergenic |
| CTTCAACAATTTCAATACTT+TGG | 0.342783 | 2.1:+57715299 | None:intergenic |
| ACTTGGTGCAGCATCACCTT+TGG | 0.357443 | 2.1:+57714505 | None:intergenic |
| GAGATCTTCTCCACAGTGTC+TGG | 0.364866 | 2.1:+57714596 | None:intergenic |
| AAGAAACTTACTTTCGTTGA+AGG | 0.370871 | 2.1:-57715253 | MS.gene058180:intron |
| AGTAAGTTTCTTGATGGTTC+CGG | 0.371837 | 2.1:+57715264 | None:intergenic |
| GGCTCTTGAAGGTTACGTTT+TGG | 0.372797 | 2.1:-57714435 | MS.gene058180:CDS |
| CAAAGTATTGAAATTGTTGA+AGG | 0.421501 | 2.1:-57715298 | MS.gene058180:CDS |
| GCTTACAACTACAGCATAGT+TGG | 0.425478 | 2.1:-57714632 | MS.gene058180:CDS |
| TGGATGGCATCAATAACCTT+TGG | 0.428619 | 2.1:+57715319 | None:intergenic |
| TTTGCAGTGGATCCTCCATC+TGG | 0.432310 | 2.1:+57714548 | None:intergenic |
| AACAATTTCAATACTTTGGA+TGG | 0.439896 | 2.1:+57715303 | None:intergenic |
| ATTGAAATTGTTGAAGGAAA+CGG | 0.445615 | 2.1:-57715292 | MS.gene058180:CDS |
| AAATCAAGGGTGGCAAAGCT+AGG | 0.448601 | 2.1:-57714475 | MS.gene058180:CDS |
| TTTGAGTCTAAATTGTCTGC+AGG | 0.453113 | 2.1:-57714572 | MS.gene058180:CDS |
| CATGGGTGTATTCAACTTTG+AGG | 0.475033 | 2.1:-57715413 | MS.gene058180:CDS |
| AGAGCTTTGTAAAGTCTAGC+AGG | 0.480944 | 2.1:+57715367 | None:intergenic |
| GGTGGCAAAGCTAGGGGTGA+TGG | 0.489081 | 2.1:-57714467 | MS.gene058180:CDS |
| AATCAAGGGTGGCAAAGCTA+GGG | 0.491277 | 2.1:-57714474 | MS.gene058180:CDS |
| ACCAAGTGAAGAGGAAATCA+AGG | 0.498836 | 2.1:-57714489 | MS.gene058180:CDS |
| TACAGCATAGTTGGAGGTGG+TGG | 0.504513 | 2.1:-57714623 | MS.gene058180:CDS |
| TTCTGATAACCTTATTCCAA+AGG | 0.526563 | 2.1:-57715335 | MS.gene058180:CDS |
| AAAGTATGATTTGCACAAAG+TGG | 0.527363 | 2.1:-57714678 | MS.gene058180:CDS |
| GTTGAAGGAAACGGTGGTGC+CGG | 0.528042 | 2.1:-57715283 | MS.gene058180:CDS |
| TGCAGACAATTTAGACTCAA+AGG | 0.553148 | 2.1:+57714574 | None:intergenic |
| AAATTGTCTGCAGGGCCAGA+TGG | 0.558648 | 2.1:-57714563 | MS.gene058180:CDS |
| TTTCACAGTAAGCTTTGCAG+TGG | 0.560964 | 2.1:+57714535 | None:intergenic |
| TTGAGTCTAAATTGTCTGCA+GGG | 0.579973 | 2.1:-57714571 | MS.gene058180:CDS |
| TACAACTACAGCATAGTTGG+AGG | 0.596062 | 2.1:-57714629 | MS.gene058180:CDS |
| TGATGCTGCACCAAGTGAAG+AGG | 0.603594 | 2.1:-57714498 | MS.gene058180:CDS |
| TTGTCTGCAGGGCCAGATGG+AGG | 0.618761 | 2.1:-57714560 | MS.gene058180:CDS |
| AACTACAGCATAGTTGGAGG+TGG | 0.623337 | 2.1:-57714626 | MS.gene058180:CDS |
| ATCAAGGGTGGCAAAGCTAG+GGG | 0.634094 | 2.1:-57714473 | MS.gene058180:CDS |
| AGCAGGAGCTACAATAGATG+TGG | 0.641681 | 2.1:+57715384 | None:intergenic |
| ACTGTGAAATACTTCACCAA+AGG | 0.653868 | 2.1:-57714521 | MS.gene058180:CDS |
| CCAAGTGAAGAGGAAATCAA+GGG | 0.664848 | 2.1:-57714488 | MS.gene058180:CDS |
| AGTGAAGAGGAAATCAAGGG+TGG | 0.695634 | 2.1:-57714485 | MS.gene058180:CDS |
| TGGTGGACTTCCAGACACTG+TGG | 0.725966 | 2.1:-57714606 | MS.gene058180:CDS |
| GAAATTGTTGAAGGAAACGG+TGG | 0.726108 | 2.1:-57715289 | MS.gene058180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATAATAAAAGAAAAG+AGG | + | chr2.1:57714960-57714979 | None:intergenic | 10.0% |
| !!! | TCTTTTCTTTTATTATATAT+TGG | - | chr2.1:57714959-57714978 | MS.gene058180:intron | 10.0% |
| !!! | CTTTTAAAAAATAGTTTTTC+TGG | + | chr2.1:57714894-57714913 | None:intergenic | 15.0% |
| !!! | GTGTTATTATATACATTTAA+TGG | - | chr2.1:57714825-57714844 | MS.gene058180:intron | 15.0% |
| !! | AAGATACATAACATAAATTG+TGG | - | chr2.1:57714755-57714774 | MS.gene058180:intron | 20.0% |
| !! | ATATATGTGAAAAATTGAAG+TGG | - | chr2.1:57714607-57714626 | MS.gene058180:CDS | 20.0% |
| ! | AACAAGAATCAAACATTTGA+TGG | + | chr2.1:57714920-57714939 | None:intergenic | 25.0% |
| ! | AACAATTTCAATACTTTGGA+TGG | + | chr2.1:57714530-57714549 | None:intergenic | 25.0% |
| ! | ATACATAACATAAATTGTGG+AGG | - | chr2.1:57714758-57714777 | MS.gene058180:intron | 25.0% |
| ! | ATTGAAATTGTTGAAGGAAA+CGG | - | chr2.1:57714538-57714557 | MS.gene058180:CDS | 25.0% |
| ! | CTTCAACAATTTCAATACTT+TGG | + | chr2.1:57714534-57714553 | None:intergenic | 25.0% |
| ! | TTTCACAATTACTAACATGA+TGG | + | chr2.1:57715104-57715123 | None:intergenic | 25.0% |
| !!! | AATTAACCGTCTTTATTTTG+AGG | + | chr2.1:57714696-57714715 | None:intergenic | 25.0% |
| !!! | CAAAGTATTGAAATTGTTGA+AGG | - | chr2.1:57714532-57714551 | MS.gene058180:CDS | 25.0% |
| AACGAAAGTAAGTTTCTTGA+TGG | + | chr2.1:57714575-57714594 | None:intergenic | 30.0% | |
| AAGAAACTTACTTTCGTTGA+AGG | - | chr2.1:57714577-57714596 | MS.gene058180:CDS | 30.0% | |
| CCATATCCTCAAAATAAAGA+CGG | - | chr2.1:57714687-57714706 | MS.gene058180:CDS | 30.0% | |
| TTCATGCAGTGAAAATTGTT+TGG | + | chr2.1:57714665-57714684 | None:intergenic | 30.0% | |
| TTCTGATAACCTTATTCCAA+AGG | - | chr2.1:57714495-57714514 | MS.gene058180:CDS | 30.0% | |
| ! | AAAGTATGATTTGCACAAAG+TGG | - | chr2.1:57715152-57715171 | MS.gene058180:intron | 30.0% |
| !! | CATCAATAACCTTTGGAATA+AGG | + | chr2.1:57714507-57714526 | None:intergenic | 30.0% |
| !!! | AACAGTTTTTTTTACACCGA+CGG | + | chr2.1:57714858-57714877 | None:intergenic | 30.0% |
| ACTGTGAAATACTTCACCAA+AGG | - | chr2.1:57715309-57715328 | MS.gene058180:CDS | 35.0% | |
| ATGTGAAAAATTGAAGTGGC+AGG | - | chr2.1:57714611-57714630 | MS.gene058180:CDS | 35.0% | |
| ATTTAATGGAGATCTACCGT+CGG | - | chr2.1:57714839-57714858 | MS.gene058180:intron | 35.0% | |
| GAAACGAATCAATTATGTGC+AGG | - | chr2.1:57715120-57715139 | MS.gene058180:intron | 35.0% | |
| TGCAGACAATTTAGACTCAA+AGG | + | chr2.1:57715259-57715278 | None:intergenic | 35.0% | |
| TTGAGTCTAAATTGTCTGCA+GGG | - | chr2.1:57715259-57715278 | MS.gene058180:CDS | 35.0% | |
| TTTGAGTCTAAATTGTCTGC+AGG | - | chr2.1:57715258-57715277 | MS.gene058180:CDS | 35.0% | |
| ! | AGTAAGTTTCTTGATGGTTC+CGG | + | chr2.1:57714569-57714588 | None:intergenic | 35.0% |
| !! | TAACATGATGGACATTCACT+TGG | + | chr2.1:57715092-57715111 | None:intergenic | 35.0% |
| !!! | CCGTCTTTATTTTGAGGATA+TGG | + | chr2.1:57714690-57714709 | None:intergenic | 35.0% |
| ACCAAGTGAAGAGGAAATCA+AGG | - | chr2.1:57715341-57715360 | MS.gene058180:CDS | 40.0% | |
| ACGAATCAATTATGTGCAGG+TGG | - | chr2.1:57715123-57715142 | MS.gene058180:intron | 40.0% | |
| CCAAGTGAAGAGGAAATCAA+GGG | - | chr2.1:57715342-57715361 | MS.gene058180:CDS | 40.0% | |
| GAAATTGTTGAAGGAAACGG+TGG | - | chr2.1:57714541-57714560 | MS.gene058180:CDS | 40.0% | |
| GACATTCACTTGGTTCAACT+AGG | + | chr2.1:57715082-57715101 | None:intergenic | 40.0% | |
| GCTTACAACTACAGCATAGT+TGG | - | chr2.1:57715198-57715217 | MS.gene058180:intron | 40.0% | |
| TACAACTACAGCATAGTTGG+AGG | - | chr2.1:57715201-57715220 | MS.gene058180:intron | 40.0% | |
| TGGATGGCATCAATAACCTT+TGG | + | chr2.1:57714514-57714533 | None:intergenic | 40.0% | |
| TTTCACAGTAAGCTTTGCAG+TGG | + | chr2.1:57715298-57715317 | None:intergenic | 40.0% | |
| ! | AGAGCTTTGTAAAGTCTAGC+AGG | + | chr2.1:57714466-57714485 | None:intergenic | 40.0% |
| AAATCAAGGGTGGCAAAGCT+AGG | - | chr2.1:57715355-57715374 | MS.gene058180:CDS | 45.0% | |
| AACTACAGCATAGTTGGAGG+TGG | - | chr2.1:57715204-57715223 | MS.gene058180:intron | 45.0% | |
| AATCAAGGGTGGCAAAGCTA+GGG | - | chr2.1:57715356-57715375 | MS.gene058180:CDS | 45.0% | |
| AGCAGGAGCTACAATAGATG+TGG | + | chr2.1:57714449-57714468 | None:intergenic | 45.0% | |
| AGTGAAGAGGAAATCAAGGG+TGG | - | chr2.1:57715345-57715364 | MS.gene058180:CDS | 45.0% | |
| CCCTTGATTTCCTCTTCACT+TGG | + | chr2.1:57715345-57715364 | None:intergenic | 45.0% | |
| ! | GGCTCTTGAAGGTTACGTTT+TGG | - | chr2.1:57715395-57715414 | MS.gene058180:CDS | 45.0% |
| !! | GGTCTTTTCAAGGCTCTTGA+AGG | - | chr2.1:57715384-57715403 | MS.gene058180:CDS | 45.0% |
| !! | TAGGGGTGATGGTCTTTTCA+AGG | - | chr2.1:57715374-57715393 | MS.gene058180:CDS | 45.0% |
| AAATTGTCTGCAGGGCCAGA+TGG | - | chr2.1:57715267-57715286 | MS.gene058180:CDS | 50.0% | |
| ATCAAGGGTGGCAAAGCTAG+GGG | - | chr2.1:57715357-57715376 | MS.gene058180:CDS | 50.0% | |
| GAGATCTTCTCCACAGTGTC+TGG | + | chr2.1:57715237-57715256 | None:intergenic | 50.0% | |
| TACAGCATAGTTGGAGGTGG+TGG | - | chr2.1:57715207-57715226 | MS.gene058180:intron | 50.0% | |
| TGATGCTGCACCAAGTGAAG+AGG | - | chr2.1:57715332-57715351 | MS.gene058180:CDS | 50.0% | |
| TTTGCAGTGGATCCTCCATC+TGG | + | chr2.1:57715285-57715304 | None:intergenic | 50.0% | |
| !! | ACTTGGTGCAGCATCACCTT+TGG | + | chr2.1:57715328-57715347 | None:intergenic | 50.0% |
| GTTGAAGGAAACGGTGGTGC+CGG | - | chr2.1:57714547-57714566 | MS.gene058180:CDS | 55.0% | |
| !! | TGGTGGACTTCCAGACACTG+TGG | - | chr2.1:57715224-57715243 | MS.gene058180:intron | 55.0% |
| GGTGGCAAAGCTAGGGGTGA+TGG | - | chr2.1:57715363-57715382 | MS.gene058180:CDS | 60.0% | |
| TTGTCTGCAGGGCCAGATGG+AGG | - | chr2.1:57715270-57715289 | MS.gene058180:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 57714418 | 57715434 | 57714418 | ID=MS.gene058180 |
| chr2.1 | mRNA | 57714418 | 57715434 | 57714418 | ID=MS.gene058180.t1;Parent=MS.gene058180 |
| chr2.1 | exon | 57715254 | 57715434 | 57715254 | ID=MS.gene058180.t1.exon1;Parent=MS.gene058180.t1 |
| chr2.1 | CDS | 57715254 | 57715434 | 57715254 | ID=cds.MS.gene058180.t1;Parent=MS.gene058180.t1 |
| chr2.1 | exon | 57714418 | 57714710 | 57714418 | ID=MS.gene058180.t1.exon2;Parent=MS.gene058180.t1 |
| chr2.1 | CDS | 57714418 | 57714710 | 57714418 | ID=cds.MS.gene058180.t1;Parent=MS.gene058180.t1 |
| Gene Sequence |
| Protein sequence |
