AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061038


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061038.t1 MTR_1g033810 94.972 358 18 0 1 358 1 358 0.0 692
MS.gene061038.t1 MTR_8g064200 56.160 349 146 3 7 350 13 359 8.03e-140 401
MS.gene061038.t1 MTR_8g064200 56.160 349 146 3 7 350 8 354 9.38e-140 401
MS.gene061038.t1 MTR_5g055680 55.241 353 149 4 8 355 4 352 5.29e-139 399
MS.gene061038.t1 MTR_5g048470 55.143 350 151 2 6 350 7 355 4.29e-137 394
MS.gene061038.t1 MTR_0009s0050 54.062 357 155 4 6 357 2 354 1.40e-136 393
MS.gene061038.t1 MTR_0009s0050 54.085 355 154 4 6 355 2 352 2.63e-136 392
MS.gene061038.t1 MTR_5g048570 53.652 356 154 5 7 357 3 352 4.26e-136 392
MS.gene061038.t1 MTR_5g055900 53.090 356 158 4 7 357 3 354 4.32e-135 389
MS.gene061038.t1 MTR_5g048550 53.933 356 155 4 6 356 2 353 1.84e-130 377
MS.gene061038.t1 MTR_5g055690 53.125 352 155 5 9 354 5 352 3.92e-129 374
MS.gene061038.t1 MTR_0009s0480 52.557 352 157 5 9 354 3 350 8.21e-129 373
MS.gene061038.t1 MTR_2g072910 51.389 360 168 3 1 355 1 358 1.60e-127 370
MS.gene061038.t1 MTR_5g048850 51.852 351 160 4 9 354 5 351 3.58e-127 369
MS.gene061038.t1 MTR_5g048740 51.852 351 159 5 10 354 4 350 3.77e-126 366
MS.gene061038.t1 MTR_5g055800 53.429 350 153 5 9 353 5 349 5.81e-126 366
MS.gene061038.t1 MTR_0328s0030 51.895 343 157 3 10 347 4 343 4.89e-125 363
MS.gene061038.t1 MTR_2g072890 50.992 353 165 3 9 355 9 359 5.37e-125 363
MS.gene061038.t1 MTR_5g055820 51.445 346 159 4 9 348 5 347 2.38e-124 362
MS.gene061038.t1 MTR_0009s0050 54.941 253 113 1 105 357 5 256 5.00e-100 296
MS.gene061038.t1 MTR_0009s0050 54.980 251 112 1 105 355 5 254 1.59e-99 295
MS.gene061038.t1 MTR_5g055690 52.222 270 120 4 9 272 5 271 5.64e-99 294
MS.gene061038.t1 MTR_5g048850 52.416 269 120 3 9 272 5 270 9.15e-99 294
MS.gene061038.t1 MTR_0009s0480 51.838 272 121 5 9 274 3 270 3.72e-94 282
MS.gene061038.t1 MTR_2g072910 50.538 279 132 2 1 274 1 278 1.42e-93 281
MS.gene061038.t1 MTR_0056s0160 52.321 237 112 1 118 354 1 236 1.22e-89 269
MS.gene061038.t1 MTR_3g026150 41.716 338 185 5 1 331 10 342 5.41e-85 261
MS.gene061038.t1 MTR_2g437380 40.923 325 185 4 22 342 27 348 1.03e-82 256
MS.gene061038.t1 MTR_7g063730 35.920 348 215 4 1 343 14 358 1.13e-77 243
MS.gene061038.t1 MTR_7g062580 34.971 346 210 4 8 344 11 350 4.08e-77 241
MS.gene061038.t1 MTR_7g062570 35.429 350 218 3 8 352 11 357 4.37e-77 241
MS.gene061038.t1 MTR_5g082750 37.462 331 203 2 22 348 24 354 8.72e-77 240
MS.gene061038.t1 MTR_3g117420 40.972 288 168 2 46 331 51 338 3.68e-75 236
MS.gene061038.t1 MTR_7g068650 38.750 320 187 3 20 330 23 342 1.04e-74 235
MS.gene061038.t1 MTR_7g062550 35.150 367 221 6 1 358 10 368 1.87e-72 230
MS.gene061038.t1 MTR_7g062600 33.515 367 226 7 1 357 1 359 4.28e-71 226
MS.gene061038.t1 MTR_3g070860 34.756 328 210 2 22 345 25 352 5.44e-71 226
MS.gene061038.t1 MTR_4g015790 34.770 348 209 3 20 349 22 369 6.69e-71 226
MS.gene061038.t1 MTR_3g092890 37.304 319 193 4 21 338 13 325 5.67e-70 222
MS.gene061038.t1 MTR_3g026150 41.935 279 150 5 1 272 10 283 3.17e-67 213
MS.gene061038.t1 MTR_7g045650 39.249 293 162 5 1 284 10 295 4.46e-67 214
MS.gene061038.t1 MTR_0009s0050 57.803 173 72 1 183 355 1 172 2.31e-66 207
MS.gene061038.t1 MTR_8g074050 37.874 301 184 2 46 345 51 349 1.35e-65 211
MS.gene061038.t1 MTR_8g074070 37.209 301 186 2 46 345 51 349 4.67e-65 210
MS.gene061038.t1 MTR_2g437380 40.078 257 150 2 87 342 1 254 5.59e-63 202
MS.gene061038.t1 MTR_3g063180 35.294 340 206 7 20 350 18 352 1.77e-62 203
MS.gene061038.t1 MTR_3g026150 40.851 235 139 0 97 331 5 239 4.11e-62 199
MS.gene061038.t1 MTR_7g062560 32.647 340 212 5 11 345 21 348 5.72e-62 202
MS.gene061038.t1 MTR_0009s0400 60.811 148 57 1 207 354 1 147 1.28e-61 194
MS.gene061038.t1 MTR_3g117485 36.890 328 185 8 14 325 10 331 1.48e-61 201
MS.gene061038.t1 MTR_8g074070 36.213 301 170 3 46 345 51 330 1.05e-60 198
MS.gene061038.t1 MTR_8g024120 35.514 321 203 4 12 331 7 324 1.80e-60 198
MS.gene061038.t1 MTR_5g065010 36.391 327 191 8 20 338 13 330 8.45e-60 196
MS.gene061038.t1 MTR_4g116010 37.024 289 173 3 40 325 43 325 1.78e-59 196
MS.gene061038.t1 MTR_7g102820 34.286 350 197 8 20 345 35 375 3.43e-55 185
MS.gene061038.t1 MTR_3g088565 38.095 273 156 4 47 314 3 267 3.45e-55 183
MS.gene061038.t1 MTR_1g034120 36.334 311 163 10 47 330 26 328 4.65e-55 184
MS.gene061038.t1 MTR_5g011250 36.508 315 187 6 20 322 16 329 5.98e-55 184
MS.gene061038.t1 MTR_3g117485 38.224 259 146 6 75 325 7 259 7.81e-55 181
MS.gene061038.t1 MTR_1g034060 36.334 311 163 10 47 330 26 328 1.35e-54 183
MS.gene061038.t1 MTR_5g059130 33.129 326 207 6 10 330 7 326 2.24e-53 179
MS.gene061038.t1 MTR_2g025120 32.797 311 197 6 44 350 1 303 2.68e-53 179
MS.gene061038.t1 MTR_1g034140 34.884 301 174 7 46 331 26 319 3.24e-52 176
MS.gene061038.t1 MTR_7g081710 32.099 324 209 5 20 338 22 339 7.72e-52 176
MS.gene061038.t1 MTR_4g087090 34.098 305 183 7 47 336 30 331 4.29e-51 174
MS.gene061038.t1 MTR_3g072810 33.022 321 200 6 16 330 10 321 7.51e-51 172
MS.gene061038.t1 MTR_3g083370 33.696 276 168 6 44 314 1 266 8.17e-51 172
MS.gene061038.t1 MTR_3g091350 37.113 291 170 6 47 331 59 342 1.69e-50 172
MS.gene061038.t1 MTR_1g062110 33.861 316 181 9 46 345 65 368 2.74e-50 172
MS.gene061038.t1 MTR_5g032870 34.314 306 195 5 38 338 29 333 1.99e-49 169
MS.gene061038.t1 MTR_3g072820 33.333 315 197 8 22 330 17 324 3.12e-49 168
MS.gene061038.t1 MTR_4g087110 32.317 328 183 8 35 330 6 326 6.59e-49 168
MS.gene061038.t1 MTR_2g069300 30.796 289 191 4 47 330 54 338 1.00e-48 168
MS.gene061038.t1 MTR_8g028435 31.379 290 188 6 47 330 60 344 1.53e-48 167
MS.gene061038.t1 MTR_8g075890 31.429 315 210 5 27 338 20 331 2.08e-48 167
MS.gene061038.t1 MTR_5g059140 32.680 306 193 6 21 319 16 315 3.82e-48 166
MS.gene061038.t1 MTR_8g009110 32.069 290 187 6 47 330 60 345 4.04e-48 166
MS.gene061038.t1 MTR_4g087100 33.882 304 178 5 47 330 26 326 4.10e-48 166
MS.gene061038.t1 MTR_5g022020 30.838 334 221 6 8 336 1 329 1.19e-47 165
MS.gene061038.t1 MTR_5g032880 36.577 298 172 6 38 330 32 317 1.40e-47 171
MS.gene061038.t1 MTR_5g032880 34.667 300 186 5 38 330 367 663 1.20e-45 166
MS.gene061038.t1 MTR_1g048940 31.092 357 206 10 18 355 19 354 1.54e-47 164
MS.gene061038.t1 MTR_0009s0410 53.125 160 66 4 9 162 3 159 2.80e-47 158
MS.gene061038.t1 MTR_4g093840 33.333 351 212 9 14 348 20 364 3.19e-47 164
MS.gene061038.t1 MTR_8g075830 32.288 319 202 9 27 338 20 331 4.15e-47 164
MS.gene061038.t1 MTR_2g102570 31.464 321 198 8 15 325 20 328 4.81e-47 164
MS.gene061038.t1 MTR_2g072930 47.879 165 80 2 1 160 1 164 5.79e-47 157
MS.gene061038.t1 MTR_8g009080 31.507 292 184 6 47 330 94 377 6.69e-47 164
MS.gene061038.t1 MTR_2g069090 30.408 319 213 4 34 347 55 369 1.05e-46 163
MS.gene061038.t1 MTR_8g009160 31.000 300 176 9 47 330 60 344 1.28e-46 162
MS.gene061038.t1 MTR_5g085330 34.050 279 165 7 47 318 5 271 1.85e-46 160
MS.gene061038.t1 MTR_3g058610 30.769 299 198 5 17 310 10 304 2.03e-46 162
MS.gene061038.t1 MTR_8g009170 32.119 302 189 8 37 330 52 345 3.41e-46 161
MS.gene061038.t1 MTR_4g087120 30.564 337 191 7 35 337 6 333 3.60e-46 161
MS.gene061038.t1 MTR_8g062600 31.090 312 198 7 42 343 62 366 9.37e-46 160
MS.gene061038.t1 MTR_4g087130 32.424 330 181 8 35 331 6 326 2.77e-45 159
MS.gene061038.t1 MTR_2g069210 31.118 331 204 10 24 342 48 366 3.72e-45 159
MS.gene061038.t1 MTR_2g069190 30.159 315 208 6 38 346 59 367 4.47e-45 159
MS.gene061038.t1 MTR_8g041620 30.769 325 208 6 20 336 41 356 5.34e-45 159
MS.gene061038.t1 MTR_8g009090 30.464 302 193 8 37 330 52 344 6.13e-45 158
MS.gene061038.t1 MTR_1g093110 31.229 301 190 6 39 330 62 354 1.75e-44 157
MS.gene061038.t1 MTR_1g070080 32.508 323 206 8 20 337 11 326 2.90e-44 155
MS.gene061038.t1 MTR_1g093120 30.351 313 208 5 39 346 59 366 4.49e-44 156
MS.gene061038.t1 MTR_3g091360 35.216 301 181 8 37 330 41 334 4.65e-44 155
MS.gene061038.t1 MTR_1g102070 31.765 340 203 8 1 322 14 342 4.81e-44 156
MS.gene061038.t1 MTR_4g024660 31.348 319 200 7 37 343 55 366 5.10e-44 156
MS.gene061038.t1 MTR_4g087140 31.148 305 186 7 47 330 26 327 5.51e-44 155
MS.gene061038.t1 MTR_1g070085 32.288 319 198 8 20 330 11 319 6.03e-44 155
MS.gene061038.t1 MTR_1g070085 32.288 319 198 8 20 330 11 319 6.03e-44 155
MS.gene061038.t1 MTR_4g117880 30.928 291 189 7 47 330 60 345 9.70e-44 155
MS.gene061038.t1 MTR_7g105070 29.825 342 223 8 20 353 32 364 1.24e-43 154
MS.gene061038.t1 MTR_2g083000 31.250 288 181 8 46 330 32 305 1.59e-43 153
MS.gene061038.t1 MTR_1g070135 32.710 321 193 9 20 330 12 319 2.33e-43 153
MS.gene061038.t1 MTR_2g083030 33.438 317 167 10 37 336 27 316 3.93e-43 152
MS.gene061038.t1 MTR_6g464620 31.902 326 203 9 10 322 28 347 6.71e-43 153
MS.gene061038.t1 MTR_3g088745 32.258 279 179 5 46 315 35 312 1.04e-42 152
MS.gene061038.t1 MTR_8g041600 30.154 325 210 6 20 336 41 356 1.35e-42 152
MS.gene061038.t1 MTR_2g069060 31.757 296 194 6 38 330 40 330 5.20e-42 150
MS.gene061038.t1 MTR_7g016090 31.875 320 205 6 21 336 14 324 5.76e-42 149
MS.gene061038.t1 MTR_7g016090 31.875 320 205 6 21 336 16 326 6.56e-42 149
MS.gene061038.t1 MTR_8g033380 30.128 312 206 6 19 322 29 336 7.79e-42 150
MS.gene061038.t1 MTR_7g451860 34.483 290 172 8 46 330 40 316 8.38e-42 149
MS.gene061038.t1 MTR_7g047670 34.483 290 172 8 46 330 40 316 8.38e-42 149
MS.gene061038.t1 MTR_0032s0040 30.097 309 192 7 39 330 52 353 2.06e-41 149
MS.gene061038.t1 MTR_6g015950 33.230 322 191 8 21 332 14 321 4.85e-41 147
MS.gene061038.t1 MTR_1g093140 28.065 310 205 7 47 346 73 374 6.95e-41 147
MS.gene061038.t1 MTR_1g011580 32.753 287 177 7 47 330 63 336 1.11e-40 147
MS.gene061038.t1 MTR_8g008930 29.934 304 193 8 37 330 52 345 1.26e-40 147
MS.gene061038.t1 MTR_3g096500 32.734 278 175 5 48 315 67 342 1.77e-40 147
MS.gene061038.t1 MTR_1g070120 32.302 291 181 7 47 330 38 319 2.37e-40 145
MS.gene061038.t1 MTR_7g056347 28.615 325 206 8 20 330 41 353 1.41e-39 144
MS.gene061038.t1 MTR_8g469400 28.529 340 210 9 18 346 39 356 4.04e-39 142
MS.gene061038.t1 MTR_2g019370 30.032 313 193 9 40 338 21 321 5.88e-39 141
MS.gene061038.t1 MTR_2g069020 31.419 296 180 8 47 330 67 351 5.91e-39 142
MS.gene061038.t1 MTR_8g063070 29.000 300 200 6 39 330 59 353 7.49e-39 142
MS.gene061038.t1 MTR_1g043760 30.897 301 199 4 47 343 54 349 7.70e-39 142
MS.gene061038.t1 MTR_2g069020 31.419 296 180 8 47 330 67 351 9.27e-39 142
MS.gene061038.t1 MTR_6g092620 32.727 275 168 6 47 314 3 267 1.79e-38 139
MS.gene061038.t1 MTR_2g069010 29.508 305 195 8 38 330 60 356 2.03e-38 141
MS.gene061038.t1 MTR_1g032140 31.190 311 192 11 45 346 64 361 2.26e-38 140
MS.gene061038.t1 MTR_4g115990 31.250 288 172 5 41 325 40 304 6.94e-38 138
MS.gene061038.t1 MTR_2g070870 32.686 309 167 11 21 314 8 290 9.05e-38 138
MS.gene061038.t1 MTR_7g016080 31.546 317 200 6 21 334 14 316 1.02e-37 138
MS.gene061038.t1 MTR_2g068960 28.525 305 194 7 47 337 63 357 1.07e-37 139
MS.gene061038.t1 MTR_5g005570 33.835 266 159 5 42 301 32 286 1.86e-37 137
MS.gene061038.t1 MTR_2g068950 27.707 314 203 7 38 337 54 357 3.97e-37 137
MS.gene061038.t1 MTR_2g025120 32.328 232 146 5 44 272 1 224 4.17e-37 134
MS.gene061038.t1 MTR_7g029655 28.231 294 191 7 47 330 67 350 1.12e-36 136
MS.gene061038.t1 MTR_3g083370 32.189 233 143 6 44 271 1 223 1.28e-36 132
MS.gene061038.t1 MTR_8g461330 29.738 343 204 12 34 358 12 335 2.53e-36 134
MS.gene061038.t1 MTR_1g081840 30.877 285 179 7 46 317 52 331 2.65e-36 135
MS.gene061038.t1 MTR_8g009120 29.110 292 181 8 47 330 60 333 3.73e-36 134
MS.gene061038.t1 MTR_1g070085 37.222 180 112 1 151 330 63 241 5.59e-36 132
MS.gene061038.t1 MTR_4g119410 29.139 302 197 7 39 330 59 353 1.08e-35 134
MS.gene061038.t1 MTR_1g070100 37.306 193 114 3 151 341 59 246 1.23e-35 130
MS.gene061038.t1 MTR_3g043900 28.152 341 212 10 20 345 26 348 1.43e-35 133
MS.gene061038.t1 MTR_3g464530 33.086 269 155 8 42 301 30 282 8.76e-35 130
MS.gene061038.t1 MTR_1g043810 28.146 302 207 5 47 343 54 350 9.01e-35 131
MS.gene061038.t1 MTR_1g043775 28.146 302 207 5 47 343 54 350 1.03e-34 130
MS.gene061038.t1 MTR_7g102720 30.225 311 198 8 42 345 32 330 1.71e-34 129
MS.gene061038.t1 MTR_1g062110 32.721 272 151 10 20 271 35 294 1.72e-34 129
MS.gene061038.t1 MTR_4g074130 32.624 282 161 8 40 308 33 298 3.42e-34 129
MS.gene061038.t1 MTR_8g009080 31.878 229 143 5 47 270 94 314 4.35e-34 128
MS.gene061038.t1 MTR_2g068840 30.892 314 192 10 47 346 55 357 5.71e-34 129
MS.gene061038.t1 MTR_4g123020 32.051 312 192 8 35 336 6 307 6.79e-34 127
MS.gene061038.t1 MTR_8g009170 32.218 239 149 6 37 270 52 282 9.52e-34 127
MS.gene061038.t1 MTR_1g032250 30.645 310 187 11 45 342 71 364 1.06e-33 128
MS.gene061038.t1 MTR_8g006930 27.796 313 213 5 39 343 59 366 2.16e-33 127
MS.gene061038.t1 MTR_8g009080 31.858 226 141 5 47 267 94 311 4.24e-33 126
MS.gene061038.t1 MTR_3g045230 27.795 331 219 8 24 345 30 349 7.83e-33 125
MS.gene061038.t1 MTR_1g032220 29.085 306 199 10 45 343 71 365 1.09e-32 125
MS.gene061038.t1 MTR_7g056393 28.289 304 199 7 39 331 59 354 1.17e-32 125
MS.gene061038.t1 MTR_4g132770 46.789 109 58 0 206 314 28 136 1.91e-32 119
MS.gene061038.t1 MTR_8g009150 27.181 298 171 8 47 330 60 325 2.59e-32 124
MS.gene061038.t1 MTR_2g069060 33.051 236 151 5 38 271 18 248 2.90e-32 122
MS.gene061038.t1 MTR_7g078010 27.103 321 216 9 20 330 41 353 6.46e-32 123
MS.gene061038.t1 MTR_1g086550 31.751 337 183 13 47 355 20 337 1.10e-31 122
MS.gene061038.t1 MTR_3g040410 29.801 302 185 10 45 338 4 286 1.97e-31 121
MS.gene061038.t1 MTR_8g041600 28.906 256 173 4 20 271 41 291 2.19e-31 120
MS.gene061038.t1 MTR_1g043770 29.452 292 187 7 47 329 53 334 4.47e-31 120
MS.gene061038.t1 MTR_1g070185 25.796 314 222 6 20 330 42 347 4.56e-31 121
MS.gene061038.t1 MTR_4g096840 29.221 308 193 10 37 323 3 306 4.67e-31 120
MS.gene061038.t1 MTR_2g033270 32.997 297 173 9 47 332 19 300 3.38e-30 117
MS.gene061038.t1 MTR_8g093930 25.223 337 219 7 14 332 17 338 1.59e-29 117
MS.gene061038.t1 MTR_1g070135 31.852 270 161 9 12 271 4 260 2.13e-29 115
MS.gene061038.t1 MTR_8g009180 29.200 250 137 8 121 343 51 287 8.44e-28 110
MS.gene061038.t1 MTR_3g464530 32.636 239 136 8 42 271 30 252 1.82e-27 108
MS.gene061038.t1 MTR_2g068800 30.142 282 155 10 20 289 30 281 3.37e-27 108
MS.gene061038.t1 MTR_7g056353 26.996 263 176 4 83 334 79 336 1.80e-26 110
MS.gene061038.t1 MTR_5g025090 28.859 298 193 7 47 340 5 287 8.43e-26 105
MS.gene061038.t1 MTR_1g027290 30.584 291 174 9 46 319 28 307 2.19e-25 105
MS.gene061038.t1 MTR_8g102600 29.605 304 181 10 68 346 29 324 4.65e-25 103
MS.gene061038.t1 MTR_8g093980 26.978 278 190 5 46 314 58 331 9.65e-25 103
MS.gene061038.t1 MTR_8g030880 29.371 286 159 9 38 302 1 264 1.26e-24 102
MS.gene061038.t1 MTR_1g070110 29.545 264 144 8 87 345 1 227 3.13e-24 99.8
MS.gene061038.t1 MTR_1g043810 29.204 226 153 4 47 270 54 274 6.83e-24 100
MS.gene061038.t1 MTR_1g043775 28.632 234 160 4 39 270 46 274 1.30e-23 99.8
MS.gene061038.t1 MTR_6g088665 29.693 293 166 9 68 330 38 320 1.35e-23 100
MS.gene061038.t1 MTR_6g088665 29.252 294 167 9 68 330 38 321 2.80e-23 99.4
MS.gene061038.t1 MTR_5g025050 27.063 303 204 9 47 346 5 293 9.98e-23 97.1
MS.gene061038.t1 MTR_5g027230 25.407 307 216 4 47 352 6 300 1.09e-22 97.1
MS.gene061038.t1 MTR_4g100600 29.630 297 190 9 47 330 9 299 4.98e-22 95.5
MS.gene061038.t1 MTR_1g043770 28.444 225 155 3 47 270 53 272 5.18e-22 95.1
MS.gene061038.t1 MTR_4g011720 30.000 300 196 9 46 338 8 300 9.79e-22 94.7
MS.gene061038.t1 MTR_7g078010 25.781 256 178 6 20 271 41 288 1.88e-21 93.6
MS.gene061038.t1 MTR_4g011690 28.667 300 199 10 41 332 3 295 8.42e-21 92.0
MS.gene061038.t1 MTR_1g027310 27.599 279 156 8 46 319 48 285 1.06e-20 91.7
MS.gene061038.t1 MTR_7g077670 28.000 275 178 8 37 302 1 264 2.77e-20 90.5
MS.gene061038.t1 MTR_4g100590 27.181 298 193 10 47 331 9 295 3.94e-19 87.0
MS.gene061038.t1 MTR_1g043840 32.121 165 104 3 182 339 69 232 1.41e-18 85.9
MS.gene061038.t1 MTR_7g090520 28.912 294 175 12 47 323 10 286 6.57e-18 84.0
MS.gene061038.t1 MTR_8g102600 28.014 282 170 10 90 346 1 274 1.49e-17 82.0
MS.gene061038.t1 MTR_3g108520 27.719 285 180 10 46 314 6 280 2.52e-16 79.3
MS.gene061038.t1 MTR_4g021380 31.183 186 118 5 154 330 114 298 4.91e-16 78.2
MS.gene061038.t1 MTR_1g032240 39.604 101 50 3 202 301 56 146 5.53e-15 72.8
MS.gene061038.t1 MTR_4g021360 25.514 243 158 6 91 321 54 285 1.06e-14 74.3
MS.gene061038.t1 MTR_4g011720 29.249 253 160 11 46 288 8 251 1.53e-13 70.5
MS.gene061038.t1 MTR_4g100590 34.746 118 70 3 219 331 133 248 6.87e-13 68.6
MS.gene061038.t1 MTR_5g024940 28.261 138 97 2 206 342 134 270 6.65e-12 65.9
MS.gene061038.t1 MTR_4g094900 28.767 219 134 8 47 245 8 224 2.48e-11 63.5
MS.gene061038.t1 MTR_6g035160 34.286 105 66 3 200 302 27 130 4.36e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061038.t1 AT4G25300 47.765 358 178 4 1 351 1 356 9.75e-117 342
MS.gene061038.t1 AT1G17020 47.632 359 179 3 1 351 1 358 2.49e-116 342
MS.gene061038.t1 AT1G17010 48.066 362 179 4 1 354 1 361 4.95e-116 341
MS.gene061038.t1 AT4G25310 48.000 350 169 5 10 351 9 353 1.60e-111 329
MS.gene061038.t1 AT1G78550 43.978 357 193 2 1 351 1 356 2.04e-110 327
MS.gene061038.t1 AT4G25310 44.699 349 154 6 10 351 9 325 4.17e-92 279
MS.gene061038.t1 AT1G78550 45.455 275 149 1 77 351 5 278 7.92e-89 268
MS.gene061038.t1 AT3G21420 42.249 329 183 4 21 342 26 354 3.76e-85 262
MS.gene061038.t1 AT3G55970 37.719 342 204 4 16 348 18 359 5.43e-80 249
MS.gene061038.t1 AT2G38240 38.793 348 197 7 16 352 11 353 1.59e-79 247
MS.gene061038.t1 AT5G05600 37.273 330 203 2 20 345 35 364 8.54e-78 243
MS.gene061038.t1 AT5G20400 36.562 320 195 4 14 325 6 325 2.00e-71 226
MS.gene061038.t1 AT5G24530 39.375 320 184 5 21 336 13 326 5.45e-71 225
MS.gene061038.t1 AT3G11180 37.725 334 196 5 20 345 64 393 8.33e-71 226
MS.gene061038.t1 AT1G49390 35.938 320 197 4 14 325 6 325 2.00e-70 224
MS.gene061038.t1 AT3G11180 38.138 333 192 7 20 344 64 390 9.88e-70 224
MS.gene061038.t1 AT5G20550 35.692 325 192 6 14 325 6 326 3.19e-65 211
MS.gene061038.t1 AT5G54000 35.897 312 187 5 23 325 19 326 4.18e-64 207
MS.gene061038.t1 AT1G49390 36.992 246 154 1 81 325 1 246 6.32e-61 197
MS.gene061038.t1 AT4G10490 34.579 321 192 7 23 334 18 329 1.60e-60 198
MS.gene061038.t1 AT4G10500 35.556 315 190 6 23 331 20 327 9.31e-60 196
MS.gene061038.t1 AT3G55970 37.594 266 157 4 16 272 18 283 5.99e-59 192
MS.gene061038.t1 AT5G05600 37.109 256 157 2 20 271 35 290 1.98e-58 191
MS.gene061038.t1 AT4G16330 36.213 301 176 7 47 342 67 356 1.16e-57 191
MS.gene061038.t1 AT5G54000 36.179 246 156 1 81 325 1 246 1.49e-57 188
MS.gene061038.t1 AT4G22880 35.669 314 188 6 22 322 17 329 3.28e-57 190
MS.gene061038.t1 AT4G22880 35.669 314 188 6 22 322 17 329 3.28e-57 190
MS.gene061038.t1 AT4G22880 35.669 314 188 6 22 322 17 329 3.28e-57 190
MS.gene061038.t1 AT4G25300 47.396 192 99 2 161 351 72 262 2.73e-56 184
MS.gene061038.t1 AT1G12010 36.131 274 160 6 46 314 6 269 1.86e-54 182
MS.gene061038.t1 AT1G77330 36.996 273 155 4 47 311 3 266 1.12e-53 179
MS.gene061038.t1 AT2G36690 34.211 342 197 10 20 345 29 358 3.15e-53 180
MS.gene061038.t1 AT2G36690 34.211 342 197 10 20 345 29 358 3.15e-53 180
MS.gene061038.t1 AT5G08640 32.915 319 202 6 22 334 18 330 5.74e-53 178
MS.gene061038.t1 AT5G08640 32.915 319 202 6 22 334 18 330 5.74e-53 178
MS.gene061038.t1 AT3G60290 35.061 328 196 7 14 330 13 334 6.40e-51 174
MS.gene061038.t1 AT1G62380 33.942 274 166 6 46 314 6 269 1.08e-50 172
MS.gene061038.t1 AT3G19010 32.602 319 193 6 32 331 9 324 1.74e-50 172
MS.gene061038.t1 AT3G19010 32.602 319 193 6 32 331 9 324 1.74e-50 172
MS.gene061038.t1 AT3G19000 35.762 302 175 6 46 331 31 329 3.46e-50 171
MS.gene061038.t1 AT5G43440 31.683 303 199 4 47 345 62 360 7.10e-50 171
MS.gene061038.t1 AT1G55290 33.657 309 191 7 42 345 57 356 6.26e-49 168
MS.gene061038.t1 AT3G13610 30.141 355 223 11 5 345 13 356 8.32e-49 168
MS.gene061038.t1 AT4G16330 37.768 233 138 3 119 349 30 257 9.23e-49 165
MS.gene061038.t1 AT3G51240 32.063 315 208 5 21 332 13 324 3.12e-48 166
MS.gene061038.t1 AT4G25420 33.837 331 193 10 2 314 13 335 3.78e-48 167
MS.gene061038.t1 AT2G44800 34.936 312 195 6 23 330 27 334 6.73e-48 166
MS.gene061038.t1 AT1G05010 34.182 275 169 5 44 314 1 267 7.67e-48 164
MS.gene061038.t1 AT5G43450 31.190 311 198 6 47 350 61 362 7.99e-48 166
MS.gene061038.t1 AT1G06620 31.353 303 198 5 46 343 61 358 6.50e-46 160
MS.gene061038.t1 AT1G06640 32.107 299 181 8 44 330 61 349 1.91e-45 159
MS.gene061038.t1 AT1G15550 29.942 344 218 9 14 347 24 354 2.29e-45 159
MS.gene061038.t1 AT4G21200 35.985 264 159 5 46 307 41 296 8.42e-45 157
MS.gene061038.t1 AT5G07480 32.219 329 185 11 47 353 44 356 4.33e-44 155
MS.gene061038.t1 AT1G80340 33.762 311 183 11 19 319 23 320 2.79e-43 153
MS.gene061038.t1 AT5G51810 32.911 316 192 10 10 314 27 333 5.03e-43 153
MS.gene061038.t1 AT1G04380 29.508 305 200 6 47 345 45 340 2.00e-42 151
MS.gene061038.t1 AT3G19010 30.721 319 169 7 32 331 9 294 2.23e-42 150
MS.gene061038.t1 AT1G06645 30.351 313 194 10 37 338 67 366 2.36e-42 152
MS.gene061038.t1 AT5G59540 28.746 327 221 6 29 348 43 364 4.83e-42 150
MS.gene061038.t1 AT1G06650 29.932 294 194 6 44 330 61 349 1.73e-41 149
MS.gene061038.t1 AT1G80330 30.321 343 210 10 8 332 4 335 1.75e-41 149
MS.gene061038.t1 AT1G04350 30.247 324 201 10 33 345 46 355 2.41e-41 148
MS.gene061038.t1 AT2G19590 34.657 277 159 9 46 314 10 272 3.88e-41 147
MS.gene061038.t1 AT5G59530 29.221 308 205 6 46 345 57 359 9.86e-41 147
MS.gene061038.t1 AT1G03410 30.882 272 177 6 65 330 76 342 1.24e-40 147
MS.gene061038.t1 AT2G30830 29.217 332 218 8 20 343 29 351 1.78e-40 146
MS.gene061038.t1 AT1G03400 32.302 291 176 8 47 330 56 332 2.28e-40 145
MS.gene061038.t1 AT1G03410 30.882 272 177 6 65 330 113 379 3.19e-40 146
MS.gene061038.t1 AT1G78440 32.534 292 168 10 47 323 18 295 1.92e-39 142
MS.gene061038.t1 AT5G07200 32.343 303 189 6 23 314 37 334 2.39e-39 144
MS.gene061038.t1 AT1G60980 33.003 303 187 6 23 313 36 334 2.50e-39 143
MS.gene061038.t1 AT4G21690 32.188 320 186 10 20 312 1 316 3.09e-39 142
MS.gene061038.t1 AT1G44090 31.269 323 208 7 4 317 23 340 1.41e-38 142
MS.gene061038.t1 AT3G12900 31.098 328 212 9 20 342 30 348 1.69e-38 141
MS.gene061038.t1 AT2G30840 29.870 308 204 7 47 347 57 359 3.27e-38 140
MS.gene061038.t1 AT3G61400 32.281 285 173 8 65 338 84 359 3.57e-38 140
MS.gene061038.t1 AT3G19000 35.124 242 138 6 46 271 31 269 6.88e-38 137
MS.gene061038.t1 AT3G51240 33.613 238 154 3 97 332 5 240 3.91e-37 135
MS.gene061038.t1 AT5G43440 32.444 225 147 3 47 270 62 282 5.50e-37 135
MS.gene061038.t1 AT4G25420 32.180 289 170 10 2 272 13 293 4.91e-36 133
MS.gene061038.t1 AT3G19010 31.679 262 157 7 32 274 9 267 5.33e-36 132
MS.gene061038.t1 AT1G06620 33.628 226 143 4 47 270 62 282 1.62e-35 131
MS.gene061038.t1 AT5G63590 35.612 278 160 9 47 315 14 281 2.72e-35 131
MS.gene061038.t1 AT2G30840 29.545 308 199 8 47 347 57 353 7.16e-35 131
MS.gene061038.t1 AT3G49620 33.220 295 167 8 41 310 28 317 8.08e-35 131
MS.gene061038.t1 AT1G06640 32.645 242 145 6 44 277 61 292 9.46e-35 130
MS.gene061038.t1 AT5G63600 32.192 292 175 8 47 330 33 309 9.46e-35 130
MS.gene061038.t1 AT2G34555 32.639 288 167 11 47 322 27 299 1.03e-34 130
MS.gene061038.t1 AT1G03400 29.467 319 176 9 47 330 56 360 1.55e-34 130
MS.gene061038.t1 AT1G06640 32.627 236 141 6 44 271 61 286 2.85e-34 128
MS.gene061038.t1 AT3G50210 31.525 295 165 9 47 310 8 296 7.94e-34 128
MS.gene061038.t1 AT3G50210 31.525 295 165 9 47 310 8 296 7.94e-34 128
MS.gene061038.t1 AT3G50210 31.525 295 165 9 47 310 8 296 7.94e-34 128
MS.gene061038.t1 AT5G63600 32.082 293 175 9 47 330 33 310 1.01e-33 127
MS.gene061038.t1 AT2G25450 29.655 290 192 6 41 323 49 333 2.34e-33 127
MS.gene061038.t1 AT1G30040 29.771 262 171 7 71 323 48 305 2.45e-33 127
MS.gene061038.t1 AT5G07480 33.906 233 138 7 133 353 19 247 2.72e-33 124
MS.gene061038.t1 AT3G49630 30.847 295 180 8 37 310 1 292 5.18e-33 125
MS.gene061038.t1 AT2G19590 34.400 250 143 8 73 314 21 257 7.43e-33 124
MS.gene061038.t1 AT5G51810 31.429 280 172 10 10 278 27 297 2.80e-32 123
MS.gene061038.t1 AT5G43450 31.579 228 143 5 47 270 61 279 1.05e-31 121
MS.gene061038.t1 AT1G06650 29.268 246 166 4 44 286 61 301 1.21e-31 121
MS.gene061038.t1 AT1G50960 32.542 295 165 9 21 301 17 291 2.10e-31 121
MS.gene061038.t1 AT5G63595 31.597 288 163 10 28 308 3 263 2.78e-31 119
MS.gene061038.t1 AT3G49630 30.859 256 164 5 67 310 34 288 4.27e-31 120
MS.gene061038.t1 AT5G43935 30.375 293 168 11 46 330 18 282 8.14e-31 119
MS.gene061038.t1 AT1G04380 30.263 228 147 5 47 271 45 263 2.31e-30 117
MS.gene061038.t1 AT5G59540 29.960 247 164 5 29 271 43 284 1.25e-29 115
MS.gene061038.t1 AT3G61400 34.112 214 125 6 65 271 84 288 5.27e-29 114
MS.gene061038.t1 AT2G30840 31.140 228 148 4 47 270 57 279 5.33e-29 114
MS.gene061038.t1 AT1G02400 30.464 302 190 12 46 336 23 315 1.06e-28 114
MS.gene061038.t1 AT1G47990 28.477 302 185 9 47 332 15 301 1.75e-28 113
MS.gene061038.t1 AT5G12270 27.508 309 210 6 47 348 56 357 4.93e-28 112
MS.gene061038.t1 AT1G52820 32.119 302 186 10 39 330 3 295 5.28e-25 103
MS.gene061038.t1 AT5G63580 30.522 249 153 7 30 272 7 241 1.13e-24 101
MS.gene061038.t1 AT5G63580 31.148 244 148 7 30 267 7 236 1.29e-24 101
MS.gene061038.t1 AT3G47190 30.882 272 158 9 47 302 32 289 7.22e-24 100
MS.gene061038.t1 AT5G58660 29.153 295 170 10 35 302 24 306 1.00e-22 98.2
MS.gene061038.t1 AT4G23340 31.618 272 162 11 38 298 1 259 2.53e-22 96.3
MS.gene061038.t1 AT3G49630 33.333 165 107 3 148 310 56 219 2.58e-21 92.4
MS.gene061038.t1 AT3G50210 34.356 163 101 3 154 310 52 214 5.05e-21 91.3
MS.gene061038.t1 AT1G35190 33.080 263 137 10 68 301 29 281 5.73e-21 92.8
MS.gene061038.t1 AT1G30040 28.095 210 138 7 71 271 48 253 3.78e-20 89.4
MS.gene061038.t1 AT3G46500 26.910 301 198 10 49 330 11 308 4.28e-20 90.1
MS.gene061038.t1 AT1G14130 26.897 290 181 7 47 325 9 278 6.47e-20 89.4
MS.gene061038.t1 AT1G35190 31.801 261 120 10 68 301 29 258 2.16e-19 87.8
MS.gene061038.t1 AT3G46500 27.941 272 174 10 49 301 11 279 2.13e-18 84.7
MS.gene061038.t1 AT1G02400 28.685 251 162 10 46 287 23 265 1.43e-17 82.0
MS.gene061038.t1 AT4G03070 29.934 304 178 10 46 330 13 300 1.50e-17 82.8
MS.gene061038.t1 AT5G58660 28.253 269 153 10 35 277 24 278 1.57e-17 82.0
MS.gene061038.t1 AT1G28030 28.939 311 194 14 38 332 3 302 1.99e-17 82.4
MS.gene061038.t1 AT4G22870 44.048 84 46 1 240 322 2 85 2.60e-17 77.4
MS.gene061038.t1 AT1G52820 32.411 253 152 10 39 281 3 246 8.64e-17 79.7
MS.gene061038.t1 AT1G14120 27.213 305 193 9 47 341 8 293 4.75e-16 78.2
MS.gene061038.t1 AT1G14120 27.213 305 193 9 47 341 8 293 4.75e-16 78.2
MS.gene061038.t1 AT1G14120 27.213 305 193 9 47 341 8 293 4.75e-16 78.2
MS.gene061038.t1 AT3G46490 28.723 282 172 11 46 301 8 286 1.73e-15 77.0
MS.gene061038.t1 AT4G22870 40.230 87 48 2 240 322 40 126 4.53e-15 72.4
MS.gene061038.t1 AT4G16765 30.387 181 115 5 161 332 59 237 9.73e-15 73.6
MS.gene061038.t1 AT4G16765 30.387 181 115 5 161 332 59 237 9.73e-15 73.6
MS.gene061038.t1 AT4G16765 30.387 181 115 5 161 332 59 237 9.73e-15 73.6
MS.gene061038.t1 AT3G46490 28.159 277 170 11 46 296 8 281 1.16e-14 74.3
MS.gene061038.t1 AT4G16765 36.752 117 67 3 221 332 77 191 7.31e-14 70.1
MS.gene061038.t1 AT4G23340 39.583 96 53 3 207 298 47 141 7.83e-14 70.1
MS.gene061038.t1 AT2G06960 33.750 160 84 5 183 338 5 146 1.48e-13 67.8
MS.gene061038.t1 AT3G46500 30.233 172 106 5 171 330 3 172 5.23e-13 67.4
MS.gene061038.t1 AT4G16765 29.825 171 109 5 161 322 59 227 6.98e-13 68.2
MS.gene061038.t1 AT3G46500 28.804 184 121 5 155 330 53 234 1.27e-12 67.4
MS.gene061038.t1 AT3G46500 28.804 184 121 5 155 330 53 234 1.27e-12 67.4
MS.gene061038.t1 AT4G03050 38.596 114 67 3 220 331 274 386 3.34e-12 67.8
MS.gene061038.t1 AT4G03050 38.596 114 67 3 220 331 274 386 3.34e-12 67.8
MS.gene061038.t1 AT1G52800 26.609 233 158 8 71 298 38 262 3.39e-12 67.0
MS.gene061038.t1 AT3G46480 39.831 118 63 4 190 301 124 239 2.34e-11 64.3
MS.gene061038.t1 AT3G46500 30.968 155 97 5 155 301 53 205 2.63e-11 63.2
MS.gene061038.t1 AT3G46500 32.867 143 82 5 171 301 34 174 3.22e-11 62.4
MS.gene061038.t1 AT3G46500 32.867 143 82 5 171 301 34 174 3.22e-11 62.4

Find 84 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATATTTCCACTCCATTC+TGG 0.128828 1.4:-18453772 None:intergenic
GTCCTTCCACTTCATTGTTT+TGG 0.172846 1.4:-18452858 None:intergenic
CTGAATGGCAGTGGTAAATT+AGG 0.179197 1.4:-18452221 None:intergenic
AGTCTTTGATGTCTTCATTT+TGG 0.184404 1.4:-18453924 None:intergenic
ATGAACATTTATGTTCTTAT+AGG 0.191971 1.4:+18452682 MS.gene061038:CDS
CTAATTTACCACTGCCATTC+AGG 0.237651 1.4:+18452222 MS.gene061038:CDS
TATGGAAGGGTTTGGTAAAA+TGG 0.244933 1.4:+18452109 MS.gene061038:CDS
GAGAAGGAGGCCAATCAATT+AGG 0.247972 1.4:+18452749 MS.gene061038:CDS
CCAAGGACATTCTCTGGTTT+AGG 0.264362 1.4:-18452793 None:intergenic
TGTTAGTATTGGAGATGTTT+TGG 0.279328 1.4:+18452939 MS.gene061038:CDS
TGAACATTTATGTTCTTATA+GGG 0.285176 1.4:+18452683 MS.gene061038:CDS
TGAACAATGCTGGTGTTTCT+AGG 0.295424 1.4:-18453816 None:intergenic
CAAGGACATTCTCTGGTTTA+GGG 0.322181 1.4:-18452792 None:intergenic
CAAAGAATGGGGTTTCTTCC+AGG 0.331953 1.4:+18450110 MS.gene061038:CDS
ATATCAAGCTTCTCCAATTC+AGG 0.337053 1.4:-18450081 None:intergenic
ATACTAACAATGAAAGCATT+TGG 0.353194 1.4:-18452925 None:intergenic
AATGCTTTCATTGTTAGTAT+TGG 0.364953 1.4:+18452928 MS.gene061038:CDS
TTATATTTCCACTCCATTCT+GGG 0.376355 1.4:-18453771 None:intergenic
TCACTCTTCCTTCCCACTTA+AGG 0.381344 1.4:+18452183 MS.gene061038:CDS
TATAAGAACATAAATGTTCA+TGG 0.396892 1.4:-18452680 None:intergenic
AATGATATTAAAGAGTCATT+AGG 0.397338 1.4:+18452727 MS.gene061038:CDS
CCAGCATTGTTCAAAACAAT+TGG 0.399873 1.4:+18453826 MS.gene061038:CDS
TTGGCAGAAACCAGGAGATA+TGG 0.406324 1.4:+18452091 MS.gene061038:CDS
TTGAGGCCAAGGACATTCTC+TGG 0.408222 1.4:-18452799 None:intergenic
TACTAACAATGAAAGCATTT+GGG 0.409334 1.4:-18452924 None:intergenic
AGAAGGAGGCCAATCAATTA+GGG 0.412296 1.4:+18452750 MS.gene061038:CDS
TGATATTGCATGCAAAGAAT+GGG 0.421827 1.4:+18450098 MS.gene061038:CDS
TTGATATTGCATGCAAAGAA+TGG 0.429762 1.4:+18450097 MS.gene061038:CDS
AGTAGTTGACCCTAATTGAT+TGG 0.429903 1.4:-18452759 None:intergenic
GGCCTCAAGGCTCATACTGA+TGG 0.431826 1.4:+18452814 MS.gene061038:CDS
AGAAGTGAAGGGTCCTGAAT+TGG 0.432567 1.4:+18450068 MS.gene061038:CDS
CGGACATAGCATGGAAATGC+TGG 0.436514 1.4:+18452007 MS.gene061038:CDS
TGAATGGCAGTGGTAAATTA+GGG 0.446061 1.4:-18452220 None:intergenic
CCAGGAGATATGGAAGGGTT+TGG 0.447241 1.4:+18452101 MS.gene061038:CDS
CCAAACCCTTCCATATCTCC+TGG 0.454886 1.4:-18452101 None:intergenic
TGGAAGAGAAGAGTAAGCTT+TGG 0.469838 1.4:+18452072 MS.gene061038:CDS
GAACAATGCTGGTGTTTCTA+GGG 0.473970 1.4:-18453815 None:intergenic
AGGGTTACAAGAGATGATAT+TGG 0.477345 1.4:-18453796 None:intergenic
AGAGAGGATCCTAATTCTCC+TGG 0.478435 1.4:-18449907 None:intergenic
TTACTTTCAGCAGAAAATCA+TGG 0.482636 1.4:+18453871 MS.gene061038:CDS
TCCTTACGCACATATCTCTC+TGG 0.485341 1.4:-18449964 None:intergenic
CAGTATGAGCCTTGAGGCCA+AGG 0.493696 1.4:-18452810 None:intergenic
GCCTCAAGGCTCATACTGAT+GGG 0.495555 1.4:+18452815 MS.gene061038:CDS
AATAAATCTACCCAGTCTAA+TGG 0.500491 1.4:-18452152 None:intergenic
CTGCTTAATTCTTTCACAGA+AGG 0.500962 1.4:-18449937 None:intergenic
TCTGTGTTAGACACAATTGT+AGG 0.509129 1.4:-18449997 None:intergenic
CTTCAGACAATAATTTGCTA+AGG 0.509250 1.4:-18450047 None:intergenic
CCTAAACCAGAGAATGTCCT+TGG 0.517359 1.4:+18452793 MS.gene061038:CDS
TACTTTCAGCAGAAAATCAT+GGG 0.521515 1.4:+18453872 MS.gene061038:CDS
ATTAAAGAGTCATTAGGAGA+AGG 0.524477 1.4:+18452733 MS.gene061038:CDS
ATGAAGATGAGCCATTAGAC+TGG 0.528866 1.4:+18452141 MS.gene061038:CDS
TTGATACAGGGAAAATTTCG+AGG 0.530985 1.4:+18452630 MS.gene061038:intron
ATTATTGTCTGAAGAAGTGA+AGG 0.532195 1.4:+18450056 MS.gene061038:CDS
CCTTCTCCAAAACAATGAAG+TGG 0.542778 1.4:+18452852 MS.gene061038:CDS
ACATTCTCTGGTTTAGGGCA+AGG 0.544669 1.4:-18452787 None:intergenic
ACAATGAAAGCATTTGGGAT+AGG 0.546467 1.4:-18452919 None:intergenic
ATGCTGGAAGATGTGAAGAT+AGG 0.546596 1.4:+18452023 MS.gene061038:CDS
GATTAATCACGGACATAGCA+TGG 0.548294 1.4:+18451998 MS.gene061038:CDS
AGTAAGCTTTGGCAGAAACC+AGG 0.549660 1.4:+18452083 MS.gene061038:CDS
TGGGCCGTAAAATGCTGCTA+TGG 0.552991 1.4:-18453752 None:intergenic
AGAGAATGTCCTTGGCCTCA+AGG 0.554106 1.4:+18452801 MS.gene061038:CDS
ATAAGTGAGACTTCCTTAAG+TGG 0.560386 1.4:-18452196 None:intergenic
GTTCTTATAGGGAAAGCACT+TGG 0.561934 1.4:+18452694 MS.gene061038:CDS
AAGATAGAAGAACACCTGAA+TGG 0.564080 1.4:-18452236 None:intergenic
TTGTAACAGATAGTGACAAA+TGG 0.565859 1.4:+18453673 MS.gene061038:intron
GAAGAACACCTGAATGGCAG+TGG 0.583488 1.4:-18452230 None:intergenic
CTGTGTTAGACACAATTGTA+GGG 0.583831 1.4:-18449996 None:intergenic
AAAGAGTCATTAGGAGAAGG+AGG 0.587244 1.4:+18452736 MS.gene061038:CDS
GGTGTAGCAGATTTCTACAA+GGG 0.588194 1.4:+18453847 MS.gene061038:CDS
TCCAGAGAGATATGTGCGTA+AGG 0.594110 1.4:+18449963 MS.gene061038:CDS
TGAGACTTCCTTAAGTGGGA+AGG 0.595397 1.4:-18452191 None:intergenic
TGGTGTAGCAGATTTCTACA+AGG 0.599014 1.4:+18453846 MS.gene061038:CDS
CAGAAACCAGGAGATATGGA+AGG 0.607847 1.4:+18452095 MS.gene061038:CDS
CTCCAAAACAATGAAGTGGA+AGG 0.608512 1.4:+18452856 MS.gene061038:CDS
TAAGTGAGACTTCCTTAAGT+GGG 0.619392 1.4:-18452195 None:intergenic
GATATTGCATGCAAAGAATG+GGG 0.620482 1.4:+18450099 MS.gene061038:CDS
AATTTGCTAAGGTCAATGAC+AGG 0.624672 1.4:-18450036 None:intergenic
GTGTAACAGCTGATTAATCA+CGG 0.633257 1.4:+18451987 MS.gene061038:intron
TTCTCTGGTTTAGGGCAAGG+AGG 0.643204 1.4:-18452784 None:intergenic
TGAAGATGAGCCATTAGACT+GGG 0.644136 1.4:+18452142 MS.gene061038:CDS
AGAAACCAGGAGATATGGAA+GGG 0.659137 1.4:+18452096 MS.gene061038:CDS
AGGTCAATGACAGGAAGCTG+TGG 0.662360 1.4:-18450027 None:intergenic
ACCCATCAGTATGAGCCTTG+AGG 0.687087 1.4:-18452816 None:intergenic
TTATTGTCTGAAGAAGTGAA+GGG 0.726279 1.4:+18450057 MS.gene061038:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTTATAATAAATAT+TGG - chr1.4:18450754-18450773 None:intergenic 0.0%
!!! AATTAATTATTTATTTTTTT+AGG + chr1.4:18453625-18453644 MS.gene061038:intron 0.0%
!!! ATTAATTATTTATTTTTTTA+GGG + chr1.4:18453626-18453645 MS.gene061038:intron 0.0%
!! AAAATATATATATATAGAGT+TGG + chr1.4:18451436-18451455 MS.gene061038:intron 10.0%
!! AAATAATCAAATATTTATCA+TGG - chr1.4:18452349-18452368 None:intergenic 10.0%
!! TAAAATAAAATGATATATGT+CGG + chr1.4:18452461-18452480 MS.gene061038:intron 10.0%
!! TGATAATAATTAGTTAATAT+TGG + chr1.4:18452607-18452626 MS.gene061038:intron 10.0%
!!! AATTTTTGTTGATAATTTAT+AGG - chr1.4:18451086-18451105 None:intergenic 10.0%
!!! ATATTACACAATTTAATTTA+GGG - chr1.4:18451886-18451905 None:intergenic 10.0%
!!! ATTTTTGTTGATAATTTATA+GGG - chr1.4:18451085-18451104 None:intergenic 10.0%
!!! TATATTACACAATTTAATTT+AGG - chr1.4:18451887-18451906 None:intergenic 10.0%
!!! TTTTTTTTTGACTAAAAAAA+TGG + chr1.4:18453086-18453105 MS.gene061038:intron 10.0%
!!! TTTTTTTTTGCTTATAATTT+GGG - chr1.4:18451559-18451578 None:intergenic 10.0%
!!! TTTTTTTTTTGCTTATAATT+TGG - chr1.4:18451560-18451579 None:intergenic 10.0%
!! AAATAATTCTTACTCAAAAA+TGG + chr1.4:18453054-18453073 MS.gene061038:intron 15.0%
!! ACTATATATAAACAAATGAA+GGG + chr1.4:18451175-18451194 MS.gene061038:intron 15.0%
!! ATAAAATATAAATCTCAAGT+TGG + chr1.4:18450921-18450940 MS.gene061038:intron 15.0%
!! ATATTTGTTTGGTAAAATTA+TGG - chr1.4:18453452-18453471 None:intergenic 15.0%
!! TACTATATATAAACAAATGA+AGG + chr1.4:18451174-18451193 MS.gene061038:intron 15.0%
!! TTTATATAAGTTCAATTGTT+TGG + chr1.4:18450807-18450826 MS.gene061038:intron 15.0%
!!! AAACTTTTTTGCTTATAATA+TGG + chr1.4:18451801-18451820 MS.gene061038:intron 15.0%
!!! AACTTTTTTGCTTATAATAT+GGG + chr1.4:18451802-18451821 MS.gene061038:intron 15.0%
!!! AGCAAATTTTGAAATTTATA+GGG - chr1.4:18451117-18451136 None:intergenic 15.0%
!!! AGCTTTTTTTTCTTATAATT+TGG + chr1.4:18451837-18451856 MS.gene061038:intron 15.0%
!!! CAATTTTTTGAAATTTAACA+GGG - chr1.4:18451023-18451042 None:intergenic 15.0%
!!! CTAAAATTTTGCATAAAATA+TGG + chr1.4:18453481-18453500 MS.gene061038:intron 15.0%
!!! GCTTTTTTTTCTTATAATTT+GGG + chr1.4:18451838-18451857 MS.gene061038:intron 15.0%
!!! TAAATGTCTTTTTTTTTTTG+TGG - chr1.4:18450329-18450348 None:intergenic 15.0%
!!! TAAGTAGAGTTTTTTTTTTA+GGG + chr1.4:18450469-18450488 MS.gene061038:intron 15.0%
!!! TAGCAAATTTTGAAATTTAT+AGG - chr1.4:18451118-18451137 None:intergenic 15.0%
!!! TATAAAATTTTGAGCAAATA+GGG - chr1.4:18453251-18453270 None:intergenic 15.0%
!!! TTAAGTAGAGTTTTTTTTTT+AGG + chr1.4:18450468-18450487 MS.gene061038:intron 15.0%
!!! TTATAAAATTTTGAGCAAAT+AGG - chr1.4:18453252-18453271 None:intergenic 15.0%
!!! TTGTTATTTGACTTATTTTT+AGG + chr1.4:18450193-18450212 MS.gene061038:intron 15.0%
!!! TTTTGTGATTCTATTTTAAT+AGG + chr1.4:18450438-18450457 MS.gene061038:intron 15.0%
!! AAATAAAAAAAGATGGAACA+TGG + chr1.4:18452884-18452903 MS.gene061038:CDS 20.0%
!! AATGATATTAAAGAGTCATT+AGG + chr1.4:18452727-18452746 MS.gene061038:CDS 20.0%
!! AATGTAACTCTATAAAATTG+TGG + chr1.4:18451960-18451979 MS.gene061038:intron 20.0%
!! AGAGAAATAAGATATTTGTT+TGG - chr1.4:18453463-18453482 None:intergenic 20.0%
!! ATGAACATTTATGTTCTTAT+AGG + chr1.4:18452682-18452701 MS.gene061038:CDS 20.0%
!! ATTATGATATACACACAAAA+TGG - chr1.4:18453596-18453615 None:intergenic 20.0%
!! CATTTCATCTAAAAATCAAA+GGG - chr1.4:18452519-18452538 None:intergenic 20.0%
!! CTCAAATGTTTCAAAAAAAT+TGG + chr1.4:18450842-18450861 MS.gene061038:intron 20.0%
!! GACAAAAAAAAACAAATGAA+GGG + chr1.4:18451202-18451221 MS.gene061038:intron 20.0%
!! GATGTAAAAACAATTTGTAA+TGG + chr1.4:18451663-18451682 MS.gene061038:intron 20.0%
!! TATAAGAACATAAATGTTCA+TGG - chr1.4:18452683-18452702 None:intergenic 20.0%
!! TCATTTCATCTAAAAATCAA+AGG - chr1.4:18452520-18452539 None:intergenic 20.0%
!! TGAACATTTATGTTCTTATA+GGG + chr1.4:18452683-18452702 MS.gene061038:CDS 20.0%
!! TGACAAAAAAAAACAAATGA+AGG + chr1.4:18451201-18451220 MS.gene061038:intron 20.0%
!! TTTCTATGAAACTTATTCAA+AGG - chr1.4:18451643-18451662 None:intergenic 20.0%
!!! AGTGATTCATATTTTATATG+TGG + chr1.4:18452967-18452986 MS.gene061038:intron 20.0%
!!! ATGTTCCATCTTTTTTTATT+TGG - chr1.4:18452885-18452904 None:intergenic 20.0%
!!! GCAATTTTTTGAAATTTAAC+AGG - chr1.4:18451024-18451043 None:intergenic 20.0%
!!! TATATTTTATGATGCACATA+AGG - chr1.4:18450911-18450930 None:intergenic 20.0%
!!! TTGTTGTTTTATAAATCCTT+CGG - chr1.4:18453297-18453316 None:intergenic 20.0%
!!! TTTACTTTTTAGTTTGAGTT+GGG - chr1.4:18453397-18453416 None:intergenic 20.0%
!!! TTTTACTTTTTAGTTTGAGT+TGG - chr1.4:18453398-18453417 None:intergenic 20.0%
!!! TTTTTTCTTATAATTTGGGA+CGG + chr1.4:18451842-18451861 MS.gene061038:intron 20.0%
! AAAATGTGTCTAATATACCT+AGG - chr1.4:18453370-18453389 None:intergenic 25.0%
! AAATGTGTCTAATATACCTA+GGG - chr1.4:18453369-18453388 None:intergenic 25.0%
! AACAACCATCATATACATAT+GGG - chr1.4:18453218-18453237 None:intergenic 25.0%
! AATAAAATGATATATGTCGG+TGG + chr1.4:18452464-18452483 MS.gene061038:intron 25.0%
! AATGCTTTCATTGTTAGTAT+TGG + chr1.4:18452928-18452947 MS.gene061038:CDS 25.0%
! GTGTATATCATAATTTATCG+TGG + chr1.4:18453602-18453621 MS.gene061038:intron 25.0%
! TATAAGTTCAATTGTTTGGA+TGG + chr1.4:18450811-18450830 MS.gene061038:intron 25.0%
! TGCATAATATATGCAAAATC+CGG + chr1.4:18450286-18450305 MS.gene061038:intron 25.0%
!! AAACAAAGTGAATTTTTGCA+TGG - chr1.4:18452564-18452583 None:intergenic 25.0%
!! AACAAAGTGAATTTTTGCAT+GGG - chr1.4:18452563-18452582 None:intergenic 25.0%
!! AATTGCATTTAATTTCTCCT+TGG + chr1.4:18451730-18451749 MS.gene061038:intron 25.0%
!! AGAACTTTTCAATCTTTCAA+TGG + chr1.4:18452052-18452071 MS.gene061038:CDS 25.0%
!! AGGTATATTAGACACATTTT+TGG + chr1.4:18453370-18453389 MS.gene061038:intron 25.0%
!! AGTTAATATTGGTTGATACA+GGG + chr1.4:18452618-18452637 MS.gene061038:intron 25.0%
!! TAGTTAATATTGGTTGATAC+AGG + chr1.4:18452617-18452636 MS.gene061038:intron 25.0%
!! TCAAAAAATCATCTTTTCCA+AGG - chr1.4:18451750-18451769 None:intergenic 25.0%
!! TTTAGGTTTGACTTATTGTT+AGG + chr1.4:18450210-18450229 MS.gene061038:intron 25.0%
!! TTTTTGCTTATAATTTGGGA+CGG - chr1.4:18451555-18451574 None:intergenic 25.0%
!!! ATACTAACAATGAAAGCATT+TGG - chr1.4:18452928-18452947 None:intergenic 25.0%
!!! ATGTCTTTTTTTTTTTGTGG+TGG - chr1.4:18450326-18450345 None:intergenic 25.0%
!!! TACTAACAATGAAAGCATTT+GGG - chr1.4:18452927-18452946 None:intergenic 25.0%
!!! TCTAACCTGTTTTTGTAATT+TGG - chr1.4:18453186-18453205 None:intergenic 25.0%
!!! TGATTCTATTTTAATAGGAG+TGG + chr1.4:18450443-18450462 MS.gene061038:intron 25.0%
AACCTAAGCAAAAGATAAGA+AGG - chr1.4:18450160-18450179 None:intergenic 30.0%
AATAAATCTACCCAGTCTAA+TGG - chr1.4:18452155-18452174 None:intergenic 30.0%
ACCTAAGCAAAAGATAAGAA+GGG - chr1.4:18450159-18450178 None:intergenic 30.0%
ACTAACCCATATGTATATGA+TGG + chr1.4:18453210-18453229 MS.gene061038:intron 30.0%
ATGGATTCTAACTTAAGCAT+TGG + chr1.4:18453105-18453124 MS.gene061038:intron 30.0%
ATTAAAGAGTCATTAGGAGA+AGG + chr1.4:18452733-18452752 MS.gene061038:CDS 30.0%
ATTACAAAAACAGGTTAGAC+CGG + chr1.4:18453187-18453206 MS.gene061038:intron 30.0%
ATTATTGTCTGAAGAAGTGA+AGG + chr1.4:18450056-18450075 MS.gene061038:CDS 30.0%
CAAAGAGTAATGTAACTCAT+TGG + chr1.4:18451921-18451940 MS.gene061038:intron 30.0%
CATAATATATGCAAAATCCG+GGG + chr1.4:18450288-18450307 MS.gene061038:intron 30.0%
GAACAACCATCATATACATA+TGG - chr1.4:18453219-18453238 None:intergenic 30.0%
GAGTTACATTACTCTTTGTT+TGG - chr1.4:18451919-18451938 None:intergenic 30.0%
GCATAATATATGCAAAATCC+GGG + chr1.4:18450287-18450306 MS.gene061038:intron 30.0%
GCCAAAAAATTAAGCCATAT+CGG - chr1.4:18453542-18453561 None:intergenic 30.0%
GGACTCCAAATAAAAAAAGA+TGG + chr1.4:18452877-18452896 MS.gene061038:CDS 30.0%
TAGATGCAATTAAACTAACC+TGG - chr1.4:18450131-18450150 None:intergenic 30.0%
TCAAGCCAAATTACAAAAAC+AGG + chr1.4:18453178-18453197 MS.gene061038:intron 30.0%
TCTATCCAAACACATTCTAA+AGG + chr1.4:18451282-18451301 MS.gene061038:intron 30.0%
TGATATTGCATGCAAAGAAT+GGG + chr1.4:18450098-18450117 MS.gene061038:CDS 30.0%
TGGATTCTAACTTAAGCATT+GGG + chr1.4:18453106-18453125 MS.gene061038:intron 30.0%
TTAAACTTGCAGTTATGTGT+AGG + chr1.4:18450346-18450365 MS.gene061038:intron 30.0%
TTACTTTCAGCAGAAAATCA+TGG + chr1.4:18453871-18453890 MS.gene061038:CDS 30.0%
TTATATTTCCACTCCATTCT+GGG - chr1.4:18453774-18453793 None:intergenic 30.0%
TTATTGTCTGAAGAAGTGAA+GGG + chr1.4:18450057-18450076 MS.gene061038:CDS 30.0%
TTGATATTGCATGCAAAGAA+TGG + chr1.4:18450097-18450116 MS.gene061038:CDS 30.0%
TTGTAACAGATAGTGACAAA+TGG + chr1.4:18453673-18453692 MS.gene061038:intron 30.0%
TTTGCTTATAATATGGGACA+AGG + chr1.4:18451808-18451827 MS.gene061038:intron 30.0%
! AAAATTAAGCCATATCGGTT+AGG - chr1.4:18453537-18453556 None:intergenic 30.0%
! AAAATTTTGAGCAAATAGGG+AGG - chr1.4:18453248-18453267 None:intergenic 30.0%
! ACAAAGTGAATTTTTGCATG+GGG - chr1.4:18452562-18452581 None:intergenic 30.0%
! AGTCTTTGATGTCTTCATTT+TGG - chr1.4:18453927-18453946 None:intergenic 30.0%
! TTTTGATCTTCCATTATAGG+TGG - chr1.4:18453564-18453583 None:intergenic 30.0%
!! CAGTTTTGATCTTCCATTAT+AGG - chr1.4:18453567-18453586 None:intergenic 30.0%
!! CTTCAGACAATAATTTGCTA+AGG - chr1.4:18450050-18450069 None:intergenic 30.0%
!! GATGTATGTTATTTCGTCTA+CGG + chr1.4:18450377-18450396 MS.gene061038:intron 30.0%
!! TGTTAGTATTGGAGATGTTT+TGG + chr1.4:18452939-18452958 MS.gene061038:CDS 30.0%
!!! AATTTTTTGGCCACCTATAA+TGG + chr1.4:18453551-18453570 MS.gene061038:intron 30.0%
!!! ACCGATATGGCTTAATTTTT+TGG + chr1.4:18453538-18453557 MS.gene061038:intron 30.0%
!!! CTTTTTTTTTTTGTGGTGGT+CGG - chr1.4:18450322-18450341 None:intergenic 30.0%
!!! GTAGAGTTTTTTTTTTAGGG+AGG + chr1.4:18450472-18450491 MS.gene061038:intron 30.0%
!!! TTTTTTTTTTTGTGGTGGTC+GGG - chr1.4:18450321-18450340 None:intergenic 30.0%
AAGATAGAAGAACACCTGAA+TGG - chr1.4:18452239-18452258 None:intergenic 35.0%
AGGGTTACAAGAGATGATAT+TGG - chr1.4:18453799-18453818 None:intergenic 35.0%
AGTAGTTGACCCTAATTGAT+TGG - chr1.4:18452762-18452781 None:intergenic 35.0%
ATAAGTGAGACTTCCTTAAG+TGG - chr1.4:18452199-18452218 None:intergenic 35.0%
ATATCAAGCTTCTCCAATTC+AGG - chr1.4:18450084-18450103 None:intergenic 35.0%
CCAGCATTGTTCAAAACAAT+TGG + chr1.4:18453826-18453845 MS.gene061038:CDS 35.0%
CCTAAGCAAAAGATAAGAAG+GGG - chr1.4:18450158-18450177 None:intergenic 35.0%
CTGCTTAATTCTTTCACAGA+AGG - chr1.4:18449940-18449959 None:intergenic 35.0%
CTGTGTTAGACACAATTGTA+GGG - chr1.4:18449999-18450018 None:intergenic 35.0%
CTTATATTTCCACTCCATTC+TGG - chr1.4:18453775-18453794 None:intergenic 35.0%
GAACAAAAACCAGGAGAATT+AGG + chr1.4:18449898-18449917 MS.gene061038:CDS 35.0%
GATATTGCATGCAAAGAATG+GGG + chr1.4:18450099-18450118 MS.gene061038:CDS 35.0%
GTGTAACAGCTGATTAATCA+CGG + chr1.4:18451987-18452006 MS.gene061038:intron 35.0%
GTTATGATCCGAATAGCTTT+AGG + chr1.4:18453329-18453348 MS.gene061038:intron 35.0%
GTTCGATAGATATATACCGA+AGG + chr1.4:18453278-18453297 MS.gene061038:intron 35.0%
TAAGTGAGACTTCCTTAAGT+GGG - chr1.4:18452198-18452217 None:intergenic 35.0%
TAGTCAACTCAGAAAAAGAG+AGG + chr1.4:18453725-18453744 MS.gene061038:CDS 35.0%
TCTGTGTTAGACACAATTGT+AGG - chr1.4:18450000-18450019 None:intergenic 35.0%
TGAATGGCAGTGGTAAATTA+GGG - chr1.4:18452223-18452242 None:intergenic 35.0%
TTAGGTGTAGACTAATGGTT+AGG - chr1.4:18453519-18453538 None:intergenic 35.0%
TTGATACAGGGAAAATTTCG+AGG + chr1.4:18452630-18452649 MS.gene061038:intron 35.0%
! CAAACACATTCTAAAGGACA+TGG + chr1.4:18451288-18451307 MS.gene061038:intron 35.0%
! CTATCCATAGCAGCATTTTA+CGG + chr1.4:18453748-18453767 MS.gene061038:CDS 35.0%
! TACCTAGGGTTTTTCTCTTT+TGG - chr1.4:18453355-18453374 None:intergenic 35.0%
! TATGGAAGGGTTTGGTAAAA+TGG + chr1.4:18452109-18452128 MS.gene061038:CDS 35.0%
! TCTTTTGGCCTAAAGCTATT+CGG - chr1.4:18453340-18453359 None:intergenic 35.0%
! TTCTTATAATTTGGGACGGA+GGG + chr1.4:18451846-18451865 MS.gene061038:intron 35.0%
! TTTCTTATAATTTGGGACGG+AGG + chr1.4:18451845-18451864 MS.gene061038:intron 35.0%
!! AATTTGCTAAGGTCAATGAC+AGG - chr1.4:18450039-18450058 None:intergenic 35.0%
!! ACAATGAAAGCATTTGGGAT+AGG - chr1.4:18452922-18452941 None:intergenic 35.0%
!! ATTCTAACTTAAGCATTGGG+AGG + chr1.4:18453109-18453128 MS.gene061038:intron 35.0%
!! CATATACATATGGGTTAGTC+CGG - chr1.4:18453209-18453228 None:intergenic 35.0%
!! CATGTCCTTTAGAATGTGTT+TGG - chr1.4:18451290-18451309 None:intergenic 35.0%
!! TAGTATTGGAGATGTTTTGG+AGG + chr1.4:18452942-18452961 MS.gene061038:CDS 35.0%
!!! ATGTCGGTGGATTTTTTCAT+CGG + chr1.4:18452477-18452496 MS.gene061038:intron 35.0%
!!! CCAATTGTTTTGAACAATGC+TGG - chr1.4:18453829-18453848 None:intergenic 35.0%
!!! TTCATTGTTTTGGAGAAGGA+TGG - chr1.4:18452851-18452870 None:intergenic 35.0%
!!! TTTTTTTTTTGTGGTGGTCG+GGG - chr1.4:18450320-18450339 None:intergenic 35.0%
AAAGAGTCATTAGGAGAAGG+AGG + chr1.4:18452736-18452755 MS.gene061038:CDS 40.0%
AGAAACCAGGAGATATGGAA+GGG + chr1.4:18452096-18452115 MS.gene061038:CDS 40.0%
AGAAGGAGGCCAATCAATTA+GGG + chr1.4:18452750-18452769 MS.gene061038:CDS 40.0%
ATCGGTTAGGTGTAGACTAA+TGG - chr1.4:18453524-18453543 None:intergenic 40.0%
ATGAAGATGAGCCATTAGAC+TGG + chr1.4:18452141-18452160 MS.gene061038:CDS 40.0%
ATGCTGGAAGATGTGAAGAT+AGG + chr1.4:18452023-18452042 MS.gene061038:CDS 40.0%
CACAAGTCTACTCTTGAGTT+AGG + chr1.4:18453421-18453440 MS.gene061038:intron 40.0%
CACAGAAGGAAAAACAAGAG+AGG - chr1.4:18449926-18449945 None:intergenic 40.0%
CATTGTGAACTTAGCTCAGT+TGG + chr1.4:18450253-18450272 MS.gene061038:intron 40.0%
CCTTCTCCAAAACAATGAAG+TGG + chr1.4:18452852-18452871 MS.gene061038:CDS 40.0%
CTAATTTACCACTGCCATTC+AGG + chr1.4:18452222-18452241 MS.gene061038:CDS 40.0%
CTCCAAAACAATGAAGTGGA+AGG + chr1.4:18452856-18452875 MS.gene061038:CDS 40.0%
CTGAATGGCAGTGGTAAATT+AGG - chr1.4:18452224-18452243 None:intergenic 40.0%
GATTAATCACGGACATAGCA+TGG + chr1.4:18451998-18452017 MS.gene061038:CDS 40.0%
GGTGTAGCAGATTTCTACAA+GGG + chr1.4:18453847-18453866 MS.gene061038:CDS 40.0%
TAGTCTACACCTAACCGATA+TGG + chr1.4:18453525-18453544 MS.gene061038:intron 40.0%
TGAACAATGCTGGTGTTTCT+AGG - chr1.4:18453819-18453838 None:intergenic 40.0%
TGAAGATGAGCCATTAGACT+GGG + chr1.4:18452142-18452161 MS.gene061038:CDS 40.0%
TGGAAGAGAAGAGTAAGCTT+TGG + chr1.4:18452072-18452091 MS.gene061038:CDS 40.0%
TGGTGTAGCAGATTTCTACA+AGG + chr1.4:18453846-18453865 MS.gene061038:CDS 40.0%
! AAGTGAATTTTTGCATGGGG+TGG - chr1.4:18452559-18452578 None:intergenic 40.0%
! CAAGGACATTCTCTGGTTTA+GGG - chr1.4:18452795-18452814 None:intergenic 40.0%
! CCCCTTCTTATCTTTTGCTT+AGG + chr1.4:18450155-18450174 MS.gene061038:intron 40.0%
! GAACAATGCTGGTGTTTCTA+GGG - chr1.4:18453818-18453837 None:intergenic 40.0%
! GTCCTTCCACTTCATTGTTT+TGG - chr1.4:18452861-18452880 None:intergenic 40.0%
! TGAACTTAGCTCAGTTGGTA+TGG + chr1.4:18450258-18450277 MS.gene061038:intron 40.0%
! TGCTTATAATTTGGGACGGA+GGG - chr1.4:18451551-18451570 None:intergenic 40.0%
! TTGCTTATAATTTGGGACGG+AGG - chr1.4:18451552-18451571 None:intergenic 40.0%
!! GTTCTTATAGGGAAAGCACT+TGG + chr1.4:18452694-18452713 MS.gene061038:CDS 40.0%
!!! CCACTTCATTGTTTTGGAGA+AGG - chr1.4:18452855-18452874 None:intergenic 40.0%
!!! GTTTTGGAGAAGGATGGTAA+GGG - chr1.4:18452845-18452864 None:intergenic 40.0%
!!! TGTTTTGGAGAAGGATGGTA+AGG - chr1.4:18452846-18452865 None:intergenic 40.0%
AGAAGTGAAGGGTCCTGAAT+TGG + chr1.4:18450068-18450087 MS.gene061038:CDS 45.0%
AGAGAGGATCCTAATTCTCC+TGG - chr1.4:18449910-18449929 None:intergenic 45.0%
CAAAGAATGGGGTTTCTTCC+AGG + chr1.4:18450110-18450129 MS.gene061038:CDS 45.0%
CAGAAACCAGGAGATATGGA+AGG + chr1.4:18452095-18452114 MS.gene061038:CDS 45.0%
CCTAAACCAGAGAATGTCCT+TGG + chr1.4:18452793-18452812 MS.gene061038:CDS 45.0%
GAGAAGGAGGCCAATCAATT+AGG + chr1.4:18452749-18452768 MS.gene061038:CDS 45.0%
GGCCAAAAGAGAAAAACCCT+AGG + chr1.4:18453350-18453369 MS.gene061038:intron 45.0%
GGGACGGAGGGATATATTTA+CGG - chr1.4:18451539-18451558 None:intergenic 45.0%
TCACTCTTCCTTCCCACTTA+AGG + chr1.4:18452183-18452202 MS.gene061038:CDS 45.0%
TCCAGAGAGATATGTGCGTA+AGG + chr1.4:18449963-18449982 MS.gene061038:CDS 45.0%
TCCTTACGCACATATCTCTC+TGG - chr1.4:18449967-18449986 None:intergenic 45.0%
TGAGACTTCCTTAAGTGGGA+AGG - chr1.4:18452194-18452213 None:intergenic 45.0%
TTGATGAGCTACACTAGGTG+AGG - chr1.4:18453162-18453181 None:intergenic 45.0%
TTGGCAGAAACCAGGAGATA+TGG + chr1.4:18452091-18452110 MS.gene061038:CDS 45.0%
! ACATTCTCTGGTTTAGGGCA+AGG - chr1.4:18452790-18452809 None:intergenic 45.0%
! AGTAAGCTTTGGCAGAAACC+AGG + chr1.4:18452083-18452102 MS.gene061038:CDS 45.0%
! ATTTTTGCATGGGGTGGAAG+AGG - chr1.4:18452553-18452572 None:intergenic 45.0%
! CCAAGGACATTCTCTGGTTT+AGG - chr1.4:18452796-18452815 None:intergenic 45.0%
! TTGGCTTGATGAGCTACACT+AGG - chr1.4:18453167-18453186 None:intergenic 45.0%
!! CATATTTATTTAAAAAAAAA+AGG - chr1.4:18452267-18452286 None:intergenic 5.0%
!!! AATTTTAAATTCTTATTTTT+AGG - chr1.4:18450888-18450907 None:intergenic 5.0%
!!! TATTCATTTTTTAAAATTTA+GGG - chr1.4:18451147-18451166 None:intergenic 5.0%
!!! TTATTCATTTTTTAAAATTT+AGG - chr1.4:18451148-18451167 None:intergenic 5.0%
ACCCATCAGTATGAGCCTTG+AGG - chr1.4:18452819-18452838 None:intergenic 50.0%
AGAGAATGTCCTTGGCCTCA+AGG + chr1.4:18452801-18452820 MS.gene061038:CDS 50.0%
AGGTCAATGACAGGAAGCTG+TGG - chr1.4:18450030-18450049 None:intergenic 50.0%
CCAAACCCTTCCATATCTCC+TGG - chr1.4:18452104-18452123 None:intergenic 50.0%
CCAGGAGATATGGAAGGGTT+TGG + chr1.4:18452101-18452120 MS.gene061038:CDS 50.0%
CGGACATAGCATGGAAATGC+TGG + chr1.4:18452007-18452026 MS.gene061038:CDS 50.0%
GAAGAACACCTGAATGGCAG+TGG - chr1.4:18452233-18452252 None:intergenic 50.0%
GCCTCAAGGCTCATACTGAT+GGG + chr1.4:18452815-18452834 MS.gene061038:CDS 50.0%
TGGGCCGTAAAATGCTGCTA+TGG - chr1.4:18453755-18453774 None:intergenic 50.0%
TTGAGGCCAAGGACATTCTC+TGG - chr1.4:18452802-18452821 None:intergenic 50.0%
! CAGCATTTTACGGCCCAGAA+TGG + chr1.4:18453758-18453777 MS.gene061038:CDS 50.0%
! TTCTCTGGTTTAGGGCAAGG+AGG - chr1.4:18452787-18452806 None:intergenic 50.0%
! TTTTACGGCCCAGAATGGAG+TGG + chr1.4:18453763-18453782 MS.gene061038:CDS 50.0%
CAGTATGAGCCTTGAGGCCA+AGG - chr1.4:18452813-18452832 None:intergenic 55.0%
GGCCTCAAGGCTCATACTGA+TGG + chr1.4:18452814-18452833 MS.gene061038:CDS 55.0%
GGTGGTCGGGGTTTGAACCC+CGG - chr1.4:18450308-18450327 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 18449895 18453948 18449895 ID=MS.gene061038
chr1.4 mRNA 18449895 18453948 18449895 ID=MS.gene061038.t1;Parent=MS.gene061038
chr1.4 exon 18449895 18450131 18449895 ID=MS.gene061038.t1.exon1;Parent=MS.gene061038.t1
chr1.4 CDS 18449895 18450131 18449895 ID=cds.MS.gene061038.t1;Parent=MS.gene061038.t1
chr1.4 exon 18451996 18452243 18451996 ID=MS.gene061038.t1.exon2;Parent=MS.gene061038.t1
chr1.4 CDS 18451996 18452243 18451996 ID=cds.MS.gene061038.t1;Parent=MS.gene061038.t1
chr1.4 exon 18452639 18452963 18452639 ID=MS.gene061038.t1.exon3;Parent=MS.gene061038.t1
chr1.4 CDS 18452639 18452963 18452639 ID=cds.MS.gene061038.t1;Parent=MS.gene061038.t1
chr1.4 exon 18453682 18453948 18453682 ID=MS.gene061038.t1.exon4;Parent=MS.gene061038.t1
chr1.4 CDS 18453682 18453948 18453682 ID=cds.MS.gene061038.t1;Parent=MS.gene061038.t1
Gene Sequence

>MS.gene061038

ATGGAACAAAAACCAGGAGAATTAGGATCCTCTCTTGTTTTTCCTTCTGTGAAAGAATTAAGCAGTGTTCCAGAGAGATATGTGCGTAAGGATATTGACTACCCTACAATTGTGTCTAACACAGATTCTTTGCCACAGCTTCCTGTCATTGACCTTAGCAAATTATTGTCTGAAGAAGTGAAGGGTCCTGAATTGGAGAAGCTTGATATTGCATGCAAAGAATGGGGTTTCTTCCAGGTTAGTTTAATTGCATCTAATCTCCCCTTCTTATCTTTTGCTTAGGTTTGTTTGCTCAATATTGTTATTTGACTTATTTTTAGGTTTGACTTATTGTTAGGTTAGACATTTAAACTTACGTCATTGTGAACTTAGCTCAGTTGGTATGGACAAATGCATAATATATGCAAAATCCGGGGTTCAAACCCCGACCACCACAAAAAAAAAAAGACATTTAAACTTGCAGTTATGTGTAGGTTTTAGATGATGTATGTTATTTCGTCTACGGATGAAGATAAAATTTATGAAACTACAAGTTTTTTTTTTTTTTGTGATTCTATTTTAATAGGAGTGGTTTTAAGTAGAGTTTTTTTTTTAGGGAGGTTTTAAGTAGAGTTATTTTGCTTAATAATTATAAACATTGAATTTCAACGATTAAATCGTTAAATTAAAAGTTCTTATTTAATAAATTAACTCTACAATTTTGTTGTAAAATTTATAAACTATTTGCTATTTCATTAAAAAATATTTGCACAAAAAGTTTCTGAATCGACTATAAGATTATATAGTTATAAATTTTTAAATTATATAAAATTTTGTGTTTGATCATTAATATAATAATTAGTTGTGTTTATCAAATCCAATATTTATTATAAATTATTTAGATGAGTAACTTTTAGAGAGTAATTCAAATTCTTTATATAAGTTCAATTGTTTGGATGGTAAAAATTCTCAAATGTTTCAAAAAAATTGGAAAATTTCAAATATCATGCTCCTAAAAATAAGAATTTAAAATTCCTTATGTGCATCATAAAATATAAATCTCAAGTTGGTCTTTATATTTTAAAAACTTTACACACTAATACTTGTTTATTTTTTGAAATTTACATTCAAATTTTGTAACTTTGTCCCTGTTAAATTTCAAAAAATTGCAAAATAGACATATTAATTTTCAAAAATTAGAAATCAAACCCTATAAATTATCAACAAAAATTAACTAGATCCCTATAAATTTCAAAATTTGCTAATTAGTCCCTAAATTTTAAAAAATGAATAATTTAATTACTATATATAAACAAATGAAGGGACTTGACAAAAAAAAACAAATGAAGGGAATTCAATTGAGACATGTAAATTGCTTTGAATTCTAATTTTTCTTAAATTTTATTACTCTATCCAAACACATTCTAAAGGACATGGTCAAAAGAAATTGAGACTAAAATTAAGAGAATAATTTTGATATAATATCAATGTATTTACATTGTCATTCAGTTATAAACTATCATTTGTATGACTGTTTTGTTAGATATGATGATTGATAAAAAAAAATATATATATATAGAGTTGGATATATGATGAAAAGCAAATGTCTTTTAAAGATCAAATGATTATATGATTGACTGAATATAAAATTATACACACAGTCCGTAAATATATCCCTCCGTCCCAAATTATAAGCAAAAAAAAAATCACACTTATTAAGAAAACTAAAATATTGTAGTAGTTTGTAGTATAGTTTTTTGTGTTATCCTTTGAATAAGTTTCATAGAAAGATGTAAAAACAATTTGTAATGGTTATTAGTTATAGAGAAAATGAAAGAGAGAGCATAATGAATGCAAATTGCATTTAATTTCTCCTTGGAAAAGATGATTTTTTGAAAAAAAAACATAATTAAATGTGATAAAAGTTAAACTTTTTTGCTTATAATATGGGACAAGGAAAATGAGCTTTTTTTTCTTATAATTTGGGACGGAGGGAGTATAAATGAAATCCCTAAATTAAATTGTGTAATATATTTATTGCACCAAACAAAGAGTAATGTAACTCATTGGTCAAAAAAAAAAGAGTAATGTAACTCTATAAAATTGTGGTTATGTGTAACAGCTGATTAATCACGGACATAGCATGGAAATGCTGGAAGATGTGAAGATAGGTGCTCGAGAACTTTTCAATCTTTCAATGGAAGAGAAGAGTAAGCTTTGGCAGAAACCAGGAGATATGGAAGGGTTTGGTAAAATGGTTGATGTGTATGAAGATGAGCCATTAGACTGGGTAGATTTATTCTACATTTTCACTCTTCCTTCCCACTTAAGGAAGTCTCACTTATTCCCTAATTTACCACTGCCATTCAGGTGTTCTTCTATCTTCATTTCCTTTTTTTTTTAAATAAATATGTTATTTATTAAACAAAATAAGATGTTTGTTTATTTTATTATTTTAAGAGTTTAATATTACCATGATAAATATTTGATTATTTAGTTTATAAAGATAAAATGTCTAATTATGTTTATCACGATGTTATATGAAAATATTATTTTTTTAATTGATTCACACACTCTACAATGTTACTAAAATAAAATGATATATGTCGGTGGATTTTTTCATCGGATCATTTTTGTCTTAACCCTTTGATTTTTAGATGAAATGATATAATTTTTCCTCTTCCACCCCATGCAAAAATTCACTTTGTTTGTTTTCTGAAAATTACATTACATTGATAATAATTAGTTAATATTGGTTGATACAGGGAAAATTTCGAGGCTTATTGTATAAAGAATAGAGAGCTTGCCATGAACATTTATGTTCTTATAGGGAAAGCACTTGGTATAAACTCAAATGATATTAAAGAGTCATTAGGAGAAGGAGGCCAATCAATTAGGGTCAACTACTATCCTCCTTGCCCTAAACCAGAGAATGTCCTTGGCCTCAAGGCTCATACTGATGGGTCTGCCCTTACCATCCTTCTCCAAAACAATGAAGTGGAAGGACTCCAAATAAAAAAAGATGGAACATGGATTAGTGTTAAGCCTATCCCAAATGCTTTCATTGTTAGTATTGGAGATGTTTTGGAGGTAAGTGATTCATATTTTATATGTGGAATGAAATTAATTTTAGAATCATAAAATTAACTGAGTATTTGCATATTTTGCTTCTATTAAAAAAAATAATTCTTACTCAAAAATGGCTTTCTAACTTTTTTTTTGACTAAAAAAATGGATTCTAACTTAAGCATTGGGAGGAAACAATTCTAACTTAAAAAACAGTTGCCTCACCTAGTGTAGCTCATCAAGCCAAATTACAAAAACAGGTTAGACCGGACTAACCCATATGTATATGATGGTTGTTCTTTTGACCTCCCTATTTGCTCAAAATTTTATAAAACAATGTTCGATAGATATATACCGAAGGATTTATAAAACAACAAAAGTCGTTCAAAGTTATGATCCGAATAGCTTTAGGCCAAAAGAGAAAAACCCTAGGTATATTAGACACATTTTTGGACCCAACTCAAACTAAAAAGTAAAAACACACAAGTCTACTCTTGAGTTAGGTATAACCATAATTTTACCAAACAAATATCTTATTTCTCTAAAATTTTGCATAAAATATGGACTTAGTCTGCACCTAACCATTAGTCTACACCTAACCGATATGGCTTAATTTTTTGGCCACCTATAATGGAAGATCAAAACTGATATCACCATTTTGTGTGTATATCATAATTTATCGTGGAATTAATTATTTATTTTTTTAGGGAATTAATATATTCTAATGTCATCTTTGTAACAGATAGTGACAAATGGTATATATAAGAGCACGACACACAGAGCTATAGTCAACTCAGAAAAAGAGAGGCTATCCATAGCAGCATTTTACGGCCCAGAATGGAGTGGAAATATAAGTCCAATATCATCTCTTGTAACCCTAGAAACACCAGCATTGTTCAAAACAATTGGTGTAGCAGATTTCTACAAGGGATTACTTTCAGCAGAAAATCATGGGAAATCATACATACATGATGTTTTGATGATCCAAAATGAAGACATCAAAGACTAG

Protein sequence

>MS.gene061038.t1

MEQKPGELGSSLVFPSVKELSSVPERYVRKDIDYPTIVSNTDSLPQLPVIDLSKLLSEEVKGPELEKLDIACKEWGFFQLINHGHSMEMLEDVKIGARELFNLSMEEKSKLWQKPGDMEGFGKMVDVYEDEPLDWVDLFYIFTLPSHLRKSHLFPNLPLPFRENFEAYCIKNRELAMNIYVLIGKALGINSNDIKESLGEGGQSIRVNYYPPCPKPENVLGLKAHTDGSALTILLQNNEVEGLQIKKDGTWISVKPIPNAFIVSIGDVLEIVTNGIYKSTTHRAIVNSEKERLSIAAFYGPEWSGNISPISSLVTLETPALFKTIGVADFYKGLLSAENHGKSYIHDVLMIQNEDIKD