AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50480.t1 MTR_4g057850 99.023 307 3 0 3 309 4 310 0.0 626
MS.gene50480.t1 MTR_4g018750 29.167 288 179 8 23 297 17 292 1.99e-30 117
MS.gene50480.t1 MTR_4g018750 28.495 186 115 6 14 191 112 287 4.97e-11 62.8
MS.gene50480.t1 MTR_1g090330 30.851 282 183 6 18 292 11 287 1.32e-29 114
MS.gene50480.t1 MTR_1g090330 28.986 207 132 6 2 197 91 293 8.78e-16 76.6
MS.gene50480.t1 MTR_7g066690 28.028 289 181 9 23 297 19 294 1.59e-25 103
MS.gene50480.t1 MTR_7g066690 29.891 184 110 7 17 191 116 289 2.64e-11 63.5
MS.gene50480.t1 MTR_4g012850 33.206 262 158 9 22 277 17 267 3.54e-25 102
MS.gene50480.t1 MTR_4g012850 29.208 202 112 7 9 193 97 284 2.91e-11 63.5
MS.gene50480.t1 MTR_7g109135 27.143 280 195 5 19 292 20 296 6.87e-25 102
MS.gene50480.t1 MTR_3g100570 26.299 308 188 8 22 298 7 306 4.79e-24 100
MS.gene50480.t1 MTR_3g100570 27.650 217 133 6 1 201 102 310 1.17e-12 67.8
MS.gene50480.t1 MTR_4g018750 28.679 265 163 9 23 273 17 269 4.90e-24 99.4
MS.gene50480.t1 MTR_4g018750 32.955 176 102 6 117 283 18 186 6.68e-17 79.7
MS.gene50480.t1 MTR_3g462140 28.261 276 176 6 34 297 28 293 3.76e-23 97.4
MS.gene50480.t1 MTR_1g097890 30.314 287 158 10 18 297 48 299 5.40e-23 97.1
MS.gene50480.t1 MTR_8g076760 27.660 282 184 8 35 301 28 304 1.85e-22 95.5
MS.gene50480.t1 MTR_8g076760 25.112 223 149 7 1 206 91 312 1.21e-15 76.3
MS.gene50480.t1 MTR_6g034515 29.845 258 160 7 33 283 79 322 2.20e-22 96.3
MS.gene50480.t1 MTR_1g088995 29.963 267 172 6 36 298 48 303 8.78e-22 93.6
MS.gene50480.t1 MTR_5g055410 25.856 263 184 5 37 292 37 295 3.24e-21 92.8
MS.gene50480.t1 MTR_5g055410 37.662 154 92 4 128 281 33 182 1.05e-11 65.1
MS.gene50480.t1 MTR_2g436930 26.214 309 186 10 19 292 13 314 3.62e-21 92.4
MS.gene50480.t1 MTR_2g436930 28.889 180 114 4 128 296 27 203 2.84e-15 75.5
MS.gene50480.t1 MTR_5g030530 29.371 286 177 9 23 292 10 286 5.08e-21 91.3
MS.gene50480.t1 MTR_5g030530 31.818 176 109 5 127 294 19 191 1.20e-16 79.0
MS.gene50480.t1 MTR_8g098240 30.189 265 165 9 21 282 320 567 5.41e-21 93.6
MS.gene50480.t1 MTR_1g087840 26.667 270 173 8 37 292 35 293 1.37e-20 90.5
MS.gene50480.t1 MTR_1g087840 30.899 178 111 3 129 297 32 206 4.27e-13 68.9
MS.gene50480.t1 MTR_8g092080 30.508 295 156 11 22 305 53 309 2.07e-20 90.1
MS.gene50480.t1 MTR_3g107510 24.382 283 192 7 16 292 117 383 7.98e-20 89.4
MS.gene50480.t1 MTR_3g107510 29.452 146 97 2 163 308 162 301 1.03e-11 65.5
MS.gene50480.t1 MTR_8g086070 26.936 297 199 10 14 306 17 299 8.11e-20 88.2
MS.gene50480.t1 MTR_5g073040 28.975 283 171 10 22 292 40 304 1.28e-19 87.8
MS.gene50480.t1 MTR_7g109135 24.643 280 195 5 19 292 20 289 1.47e-19 87.4
MS.gene50480.t1 MTR_3g025800 26.129 310 197 7 8 290 15 319 3.48e-19 87.0
MS.gene50480.t1 MTR_1g012030 25.267 281 192 7 16 292 134 400 5.82e-19 87.0
MS.gene50480.t1 MTR_1g012030 29.255 188 114 6 3 182 215 391 5.79e-14 72.4
MS.gene50480.t1 MTR_4g119770 23.810 315 200 8 19 298 12 321 1.03e-18 85.5
MS.gene50480.t1 MTR_8g066975 27.875 287 180 10 23 292 10 286 1.31e-18 84.7
MS.gene50480.t1 MTR_8g066975 30.114 176 112 4 127 294 19 191 1.18e-13 70.5
MS.gene50480.t1 MTR_7g064980 24.752 303 198 11 9 292 13 304 2.03e-18 84.3
MS.gene50480.t1 MTR_7g064980 25.123 203 148 4 1 201 114 314 2.58e-12 67.0
MS.gene50480.t1 MTR_5g009500 26.936 297 184 9 22 292 39 328 1.97e-17 82.0
MS.gene50480.t1 MTR_5g081150 25.243 309 199 10 3 292 16 311 2.68e-17 81.3
MS.gene50480.t1 MTR_2g102010 31.599 269 166 9 22 283 18 275 7.74e-17 79.7
MS.gene50480.t1 MTR_3g104500 24.296 284 187 7 27 291 37 311 8.74e-17 79.7
MS.gene50480.t1 MTR_3g104500 25.989 177 122 5 129 298 47 221 2.83e-11 63.9
MS.gene50480.t1 MTR_8g068890 26.129 310 188 10 22 298 7 308 1.04e-16 79.7
MS.gene50480.t1 MTR_4g119770 28.022 182 115 3 128 296 26 204 2.25e-16 77.8
MS.gene50480.t1 MTR_4g119770 22.835 254 164 6 19 245 12 260 7.71e-11 62.0
MS.gene50480.t1 MTR_7g109135 28.485 165 115 3 128 292 36 197 3.50e-16 76.6
MS.gene50480.t1 MTR_5g032420 25.868 317 187 9 22 298 7 315 5.48e-16 77.4
MS.gene50480.t1 MTR_3g098460 24.055 291 187 10 22 298 206 476 9.61e-16 77.8
MS.gene50480.t1 MTR_7g109135 28.485 165 115 3 128 292 57 218 9.88e-16 75.5
MS.gene50480.t1 MTR_7g084400 24.662 296 194 8 13 298 205 481 3.33e-15 76.3
MS.gene50480.t1 MTR_4g094578 27.931 290 176 12 22 298 30 299 6.42e-15 74.3
MS.gene50480.t1 MTR_8g027975 25.828 302 183 11 22 292 52 343 6.76e-15 74.7
MS.gene50480.t1 MTR_8g027975 31.214 173 111 5 130 298 65 233 3.55e-13 69.7
MS.gene50480.t1 MTR_4g088545 22.819 298 212 7 18 301 9 302 7.84e-15 73.9
MS.gene50480.t1 MTR_4g088545 28.283 198 127 7 107 296 2 192 2.88e-12 66.6
MS.gene50480.t1 MTR_7g068340 22.857 280 187 9 37 306 103 363 2.53e-14 73.2
MS.gene50480.t1 MTR_8g096050 24.382 283 196 8 22 298 228 498 1.06e-13 71.6
MS.gene50480.t1 MTR_6g015860 25.979 281 176 11 23 284 21 288 1.71e-13 70.5
MS.gene50480.t1 MTR_4g088545 26.374 182 126 4 18 192 9 189 3.74e-13 68.6
MS.gene50480.t1 MTR_4g088545 28.283 198 127 7 107 296 2 192 1.71e-12 67.0
MS.gene50480.t1 MTR_4g088545 26.374 182 126 4 18 192 9 189 4.36e-13 68.2
MS.gene50480.t1 MTR_4g088545 28.283 198 127 7 107 296 2 192 7.07e-13 67.4
MS.gene50480.t1 MTR_5g024770 24.648 284 167 10 25 298 21 267 4.42e-13 68.9
MS.gene50480.t1 MTR_4g114320 29.787 188 112 8 3 182 200 375 8.86e-13 68.6
MS.gene50480.t1 MTR_4g114320 22.680 291 187 8 16 292 118 384 4.21e-12 66.6
MS.gene50480.t1 MTR_4g114320 27.551 196 123 5 114 306 122 301 1.03e-11 65.5
MS.gene50480.t1 MTR_8g086070 28.655 171 112 5 14 182 17 179 1.27e-12 66.2
MS.gene50480.t1 MTR_2g436930 27.273 209 127 7 104 292 21 224 1.32e-12 66.6
MS.gene50480.t1 MTR_3g074490 29.630 189 109 6 121 302 118 289 2.69e-12 67.4
MS.gene50480.t1 MTR_8g107270 25.397 189 127 3 120 298 22 206 4.08e-12 66.2
MS.gene50480.t1 MTR_8g107270 23.448 290 187 12 29 298 26 300 6.51e-12 65.5
MS.gene50480.t1 MTR_1g088995 32.192 146 89 4 36 178 48 186 4.30e-12 65.1
MS.gene50480.t1 MTR_1g088995 31.548 168 89 6 120 279 37 186 3.13e-11 62.8
MS.gene50480.t1 MTR_2g032610 25.267 281 183 11 22 284 30 301 6.37e-12 65.9
MS.gene50480.t1 MTR_2g098070 26.943 193 122 4 132 309 82 270 6.48e-12 65.9
MS.gene50480.t1 MTR_1g095780 27.500 280 153 10 21 286 525 768 7.18e-12 66.6
MS.gene50480.t1 MTR_7g015870 23.875 289 189 9 34 305 38 312 1.02e-11 65.1
MS.gene50480.t1 MTR_7g015870 24.345 267 176 8 35 284 35 292 1.34e-11 64.7
MS.gene50480.t1 MTR_3g104600 25.705 319 197 14 5 296 18 323 1.40e-11 64.7
MS.gene50480.t1 MTR_8g019480 24.490 294 162 10 32 280 44 322 2.94e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50480.t1 AT5G01340 78.827 307 64 1 5 310 1 307 0.0 521
MS.gene50480.t1 AT1G14140 32.082 293 176 11 13 292 8 290 8.51e-29 112
MS.gene50480.t1 AT1G14140 28.641 206 129 5 5 200 102 299 2.94e-16 78.2
MS.gene50480.t1 AT3G54110 29.603 277 170 9 34 297 28 292 2.38e-28 111
MS.gene50480.t1 AT3G54110 35.417 192 105 7 117 298 18 200 6.09e-19 85.9
MS.gene50480.t1 AT3G54110 30.198 202 121 7 1 191 95 287 8.70e-15 73.9
MS.gene50480.t1 AT5G58970 28.713 303 183 10 22 307 17 303 4.24e-28 110
MS.gene50480.t1 AT5G58970 29.891 184 115 3 14 191 113 288 1.50e-14 73.2
MS.gene50480.t1 AT1G34065 31.525 295 160 10 18 305 72 331 3.90e-24 100
MS.gene50480.t1 AT1G34065 31.525 295 160 10 18 305 79 338 4.29e-24 100
MS.gene50480.t1 AT5G66380 28.378 296 193 8 20 301 9 299 4.87e-24 99.8
MS.gene50480.t1 AT5G66380 28.125 192 126 4 11 191 100 290 1.58e-17 81.6
MS.gene50480.t1 AT5G66380 32.258 186 113 4 127 305 21 200 4.42e-16 77.8
MS.gene50480.t1 AT2G37890 25.552 317 196 9 5 298 29 328 6.81e-24 100
MS.gene50480.t1 AT3G53940 27.586 290 182 9 20 292 72 350 6.00e-23 97.8
MS.gene50480.t1 AT3G53940 32.836 201 122 6 103 296 61 255 1.27e-16 79.7
MS.gene50480.t1 AT1G25380 27.174 276 189 7 37 304 37 308 8.81e-23 97.4
MS.gene50480.t1 AT1G25380 39.103 156 87 4 129 281 34 184 1.45e-15 76.6
MS.gene50480.t1 AT1G25380 27.174 276 189 7 37 304 37 308 8.81e-23 97.4
MS.gene50480.t1 AT1G25380 39.103 156 87 4 129 281 34 184 1.45e-15 76.6
MS.gene50480.t1 AT4G03115 27.797 295 191 7 15 301 28 308 1.67e-22 95.9
MS.gene50480.t1 AT4G03115 27.797 295 191 7 15 301 60 340 2.13e-22 95.9
MS.gene50480.t1 AT5G19760 26.689 296 198 10 14 304 14 295 1.12e-21 93.2
MS.gene50480.t1 AT4G39460 30.851 282 153 9 22 296 59 305 1.56e-21 93.2
MS.gene50480.t1 AT4G39460 30.851 282 153 9 22 296 59 305 1.56e-21 93.2
MS.gene50480.t1 AT4G39460 30.851 282 153 9 22 296 59 305 1.56e-21 93.2
MS.gene50480.t1 AT2G33820 24.422 303 201 8 18 301 15 308 2.19e-21 92.8
MS.gene50480.t1 AT5G46800 29.412 289 176 10 23 292 10 289 2.12e-20 89.7
MS.gene50480.t1 AT5G46800 27.536 207 124 5 97 292 1 192 5.65e-14 71.6
MS.gene50480.t1 AT5G46800 29.412 289 176 10 23 292 10 289 2.12e-20 89.7
MS.gene50480.t1 AT5G46800 27.536 207 124 5 97 292 1 192 5.65e-14 71.6
MS.gene50480.t1 AT5G46800 29.412 289 176 10 23 292 10 289 2.12e-20 89.7
MS.gene50480.t1 AT5G46800 27.536 207 124 5 97 292 1 192 5.65e-14 71.6
MS.gene50480.t1 AT4G11440 28.369 282 176 9 21 293 330 594 9.55e-20 90.1
MS.gene50480.t1 AT4G11440 28.369 282 176 9 21 293 330 594 9.55e-20 90.1
MS.gene50480.t1 AT4G32400 28.571 294 166 11 16 292 109 375 1.23e-19 89.0
MS.gene50480.t1 AT4G32400 27.041 196 138 4 12 206 199 390 4.01e-11 63.5
MS.gene50480.t1 AT2G47490 26.812 276 176 8 37 298 33 296 1.48e-19 87.4
MS.gene50480.t1 AT2G47490 35.484 155 94 2 129 281 30 180 2.44e-14 72.8
MS.gene50480.t1 AT2G33820 23.492 315 197 8 18 301 15 316 1.71e-19 87.4
MS.gene50480.t1 AT5G48970 24.839 310 192 8 19 292 20 324 1.78e-19 87.8
MS.gene50480.t1 AT5G48970 30.189 212 128 5 99 296 5 210 1.97e-17 82.0
MS.gene50480.t1 AT4G01100 25.938 320 202 10 4 292 19 334 4.71e-19 86.7
MS.gene50480.t1 AT1G07030 27.181 298 180 10 22 303 41 317 5.32e-19 86.3
MS.gene50480.t1 AT4G01100 25.763 295 188 8 30 298 1 290 5.78e-19 85.9
MS.gene50480.t1 AT4G24570 26.923 312 181 9 22 298 7 306 8.32e-19 85.5
MS.gene50480.t1 AT4G01100 25.882 340 203 11 4 298 19 354 2.13e-18 85.1
MS.gene50480.t1 AT2G30160 27.213 305 174 11 22 303 43 322 2.39e-18 84.3
MS.gene50480.t1 AT2G22500 26.710 307 192 9 24 303 9 309 5.03e-18 83.2
MS.gene50480.t1 AT2G22500 30.102 196 116 4 9 191 111 298 7.15e-13 68.6
MS.gene50480.t1 AT1G79900 28.226 248 150 8 37 277 32 258 8.15e-18 82.4
MS.gene50480.t1 AT5G09470 29.150 247 165 5 59 303 95 333 1.45e-17 82.4
MS.gene50480.t1 AT5G09470 26.667 195 120 6 9 191 139 322 2.86e-11 63.9
MS.gene50480.t1 AT3G55640 31.000 200 127 5 105 298 28 222 1.74e-17 80.9
MS.gene50480.t1 AT3G55640 31.000 200 127 5 105 298 28 222 1.74e-17 80.9
MS.gene50480.t1 AT4G03115 28.333 240 157 5 63 301 12 237 2.64e-17 80.1
MS.gene50480.t1 AT4G03115 28.889 180 109 5 19 191 61 228 2.22e-11 63.2
MS.gene50480.t1 AT4G03115 28.333 240 157 5 63 301 20 245 3.70e-17 79.7
MS.gene50480.t1 AT4G03115 28.889 180 109 5 19 191 69 236 2.65e-11 63.2
MS.gene50480.t1 AT3G55640 31.000 200 127 5 105 298 28 222 4.42e-17 80.9
MS.gene50480.t1 AT3G55640 24.510 306 194 10 8 292 26 315 3.05e-16 78.6
MS.gene50480.t1 AT3G55640 31.000 200 127 5 105 298 28 222 4.42e-17 80.9
MS.gene50480.t1 AT3G55640 24.510 306 194 10 8 292 26 315 3.05e-16 78.6
MS.gene50480.t1 AT3G53940 32.836 201 122 6 103 296 61 255 5.07e-17 80.1
MS.gene50480.t1 AT3G53940 28.889 225 133 9 20 226 72 287 1.34e-11 64.3
MS.gene50480.t1 AT5G58970 27.731 238 145 9 22 242 17 244 2.41e-16 77.8
MS.gene50480.t1 AT5G58970 31.771 192 117 6 115 298 17 202 7.29e-16 76.6
MS.gene50480.t1 AT3G21390 30.366 191 118 5 128 306 31 218 3.54e-16 78.2
MS.gene50480.t1 AT3G21390 22.977 309 198 8 19 292 17 320 1.09e-15 77.0
MS.gene50480.t1 AT3G21390 30.366 191 118 5 128 306 53 240 4.15e-16 78.2
MS.gene50480.t1 AT3G21390 22.977 309 198 8 19 292 39 342 1.38e-15 76.6
MS.gene50480.t1 AT2G17270 25.694 288 177 10 25 298 22 286 5.13e-15 74.7
MS.gene50480.t1 AT2G26360 26.642 274 165 9 21 286 115 360 6.22e-15 75.1
MS.gene50480.t1 AT2G33820 28.342 187 116 7 18 192 15 195 8.91e-15 73.6
MS.gene50480.t1 AT5G48970 25.703 249 159 7 63 290 8 251 1.58e-14 72.8
MS.gene50480.t1 AT5G48970 31.206 141 93 2 157 296 2 139 6.01e-13 68.2
MS.gene50480.t1 AT5G42130 26.154 260 164 8 35 283 132 374 5.59e-14 72.4
MS.gene50480.t1 AT1G74240 24.771 327 192 8 9 290 7 324 1.60e-13 70.9
MS.gene50480.t1 AT5G51050 25.532 282 183 9 22 294 224 487 3.53e-13 70.1
MS.gene50480.t1 AT5G17400 28.324 173 118 2 132 298 30 202 5.56e-13 68.6
MS.gene50480.t1 AT5G17400 25.000 296 179 14 37 308 30 306 1.16e-11 64.7
MS.gene50480.t1 AT5G56450 23.397 312 201 11 7 291 15 315 7.23e-13 68.6
MS.gene50480.t1 AT4G03115 29.714 175 106 5 15 182 28 192 7.36e-13 67.4
MS.gene50480.t1 AT4G03115 29.714 175 106 5 15 182 28 192 9.89e-13 67.0
MS.gene50480.t1 AT3G51870 23.792 269 179 8 37 298 107 356 1.03e-12 68.6
MS.gene50480.t1 AT2G33820 25.000 192 130 5 119 301 41 227 1.97e-12 66.2
MS.gene50480.t1 AT5G15640 27.076 277 160 12 34 284 41 301 2.77e-12 66.6
MS.gene50480.t1 AT5G15640 27.076 277 160 12 34 284 34 294 4.16e-12 66.2
MS.gene50480.t1 AT1G74240 25.352 284 175 6 35 290 2 276 4.20e-12 66.2
MS.gene50480.t1 AT4G26180 25.000 304 194 10 14 296 13 303 5.19e-12 66.2
MS.gene50480.t1 AT5G01500 22.794 272 184 7 37 301 135 387 6.37e-12 66.2
MS.gene50480.t1 AT4G28390 26.733 202 124 6 113 298 78 271 8.74e-11 62.8
MS.gene50480.t1 AT4G28390 26.733 202 124 6 113 298 78 271 8.74e-11 62.8

Find 95 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCATGGCCGCCTTCTTTC+TGG 0.145610 7.3:+16211783 MS.gene50480:CDS
CAGAAGGTGTACGTGCTTTA+TGG 0.198723 7.3:+16211649 MS.gene50480:CDS
CTTCTTTCTGGATTCGGTGC+TGG 0.212581 7.3:+16211795 MS.gene50480:CDS
CCATGGCAGTCGATGATTTC+AGG 0.246974 7.3:+16214922 MS.gene50480:CDS
AAGAAGGAATTCTTGCATTA+TGG 0.250175 7.3:+16215082 MS.gene50480:CDS
TTCTTTCTGGATTCGGTGCT+GGG 0.254933 7.3:+16211796 MS.gene50480:CDS
AAGAAGGCCTTCGTGGGCTT+TGG 0.284683 7.3:+16214779 MS.gene50480:CDS
TGGATCCCTCGGAGGGGTTA+TGG 0.306711 7.3:+16211521 MS.gene50480:CDS
GGCCGCCTTCTTTCTGGATT+CGG 0.312891 7.3:+16211789 MS.gene50480:CDS
AGAAGGCCTTCGTGGGCTTT+GGG 0.321993 7.3:+16214780 MS.gene50480:CDS
GATGTGAAAGCTACCTCAAA+TGG 0.326020 7.3:-16211846 None:intergenic
GGCCTTCGTGGGCTTTGGGC+TGG 0.357457 7.3:+16214784 MS.gene50480:CDS
ATGATTTCAGGATTCCTTGC+AGG 0.370955 7.3:+16214934 MS.gene50480:CDS
TCAAAGGGACCGGTGCAAAT+AGG 0.385727 7.3:-16214967 None:intergenic
TTCTGCATATATTGTTCTGA+TGG 0.413714 7.3:-16215061 None:intergenic
CCTTACATGAAGGCAATCTC+TGG 0.423164 7.3:+16211501 MS.gene50480:CDS
GTTCCATTACGCATTATAGT+AGG 0.429392 7.3:-16214814 None:intergenic
TGTCATTGTCACCCCATTTG+AGG 0.431482 7.3:+16211833 MS.gene50480:CDS
AGACCAGATTGCAGCTTGAT+AGG 0.431519 7.3:+16211577 MS.gene50480:CDS
ATCAGCCACACCCCACATAA+TGG 0.435260 7.3:-16215148 None:intergenic
GGATTCCTTGCAGGGACAGC+TGG 0.438581 7.3:+16214943 MS.gene50480:CDS
AGATTGCAGCTTGATAGGTC+TGG 0.443472 7.3:+16211582 MS.gene50480:CDS
GAAAACAAGGTTGATGGCTC+AGG 0.449285 7.3:+16214996 MS.gene50480:CDS
ACCTGGACAGGCCATTATGT+GGG 0.449847 7.3:+16215137 MS.gene50480:CDS
CCAGAGATTGCCTTCATGTA+AGG 0.460757 7.3:-16211501 None:intergenic
CTGGTCTTGATGACATCAAT+TGG 0.462673 7.3:-16211561 None:intergenic
GGGAGGTGAAGTGAAGTACA+AGG 0.465904 7.3:+16215026 MS.gene50480:CDS
TAAGATTGCAGCAGCAGAAA+GGG 0.466062 7.3:+16214695 MS.gene50480:CDS
TTTGAAGTATACCCTTCGTA+TGG 0.468774 7.3:+16211704 MS.gene50480:CDS
GGTGTGGCTGATCAAGTAAT+TGG 0.470028 7.3:+16215159 MS.gene50480:CDS
ATGTGAAAGCTACCTCAAAT+GGG 0.470361 7.3:-16211845 None:intergenic
AGACCTATCAAGCTGCAATC+TGG 0.470378 7.3:-16211580 None:intergenic
AGAGGTCCTGTGCATTGTGC+AGG 0.488214 7.3:+16214742 MS.gene50480:CDS
CATGAGAATCCCACCTGGAC+AGG 0.489841 7.3:+16215125 MS.gene50480:CDS
AGAACAATATATGCAGAAGA+AGG 0.494120 7.3:+16215066 MS.gene50480:CDS
AAAGTCAAATGTGTGGCAAA+AGG 0.503996 7.3:-16211684 None:intergenic
TTGTGCAGGAATGATCATAA+AGG 0.509840 7.3:+16214756 MS.gene50480:CDS
GATTGCAGCTTGATAGGTCT+GGG 0.514290 7.3:+16211583 MS.gene50480:CDS
CACCTGGACAGGCCATTATG+TGG 0.518059 7.3:+16215136 MS.gene50480:CDS
ATGGTAGAGTTCTTCTACCA+TGG 0.521546 7.3:+16214905 MS.gene50480:CDS
CATATATTGTTCTGATGGCA+TGG 0.531438 7.3:-16215056 None:intergenic
ACAGGCCATTATGTGGGGTG+TGG 0.532932 7.3:+16215143 MS.gene50480:CDS
ATCATTCCTGCACAATGCAC+AGG 0.534918 7.3:-16214748 None:intergenic
CACATAATGGCCTGTCCAGG+TGG 0.535007 7.3:-16215135 None:intergenic
TGTAGTGAAAACAAGGTTGA+TGG 0.536248 7.3:+16214990 MS.gene50480:CDS
ACTGGGAAGATTAGTAATCA+TGG 0.537012 7.3:+16211768 MS.gene50480:CDS
ACTCCTACTATAATGCGTAA+TGG 0.537843 7.3:+16214811 MS.gene50480:CDS
CAGCACCGAATCCAGAAAGA+AGG 0.540658 7.3:-16211794 None:intergenic
TGATTTCAGGATTCCTTGCA+GGG 0.542810 7.3:+16214935 MS.gene50480:CDS
TTGAAGTATACCCTTCGTAT+GGG 0.543672 7.3:+16211705 MS.gene50480:CDS
TGATAGGTCTGGGAATTACA+AGG 0.544752 7.3:+16211593 MS.gene50480:CDS
GGAATTCTTGCATTATGGAA+AGG 0.546024 7.3:+16215087 MS.gene50480:CDS
ATCAATTCCACCTTACATGA+AGG 0.548601 7.3:+16211491 MS.gene50480:CDS
AGGTGTACGTGCTTTATGGA+AGG 0.548707 7.3:+16211653 MS.gene50480:CDS
AAGGCAATCTCTGGATCCCT+CGG 0.549310 7.3:+16211510 MS.gene50480:CDS
CCCCACATAATGGCCTGTCC+AGG 0.549375 7.3:-16215138 None:intergenic
TTGATGGCTCAGGGTAGAGA+GGG 0.553309 7.3:+16215006 MS.gene50480:CDS
CAATCTCTGGATCCCTCGGA+GGG 0.554088 7.3:+16211514 MS.gene50480:CDS
GGTGTACGTGCTTTATGGAA+GGG 0.558927 7.3:+16211654 MS.gene50480:CDS
TTTCACTACATCAAAGGGAC+CGG 0.560781 7.3:-16214977 None:intergenic
ATAAAGGAAGAAGGCCTTCG+TGG 0.560802 7.3:+16214772 MS.gene50480:CDS
GTTGATGGCTCAGGGTAGAG+AGG 0.567738 7.3:+16215005 MS.gene50480:CDS
CTCTATATTTCAAAAGCTCG+TGG 0.567919 7.3:-16214723 None:intergenic
CCTTTGATGTAGTGAAAACA+AGG 0.568147 7.3:+16214983 MS.gene50480:CDS
GGAATGATCATAAAGGAAGA+AGG 0.568531 7.3:+16214763 MS.gene50480:CDS
GGAGGTGAAGTGAAGTACAA+GGG 0.568679 7.3:+16215027 MS.gene50480:CDS
ATTCGGTGCTGGGGTTCTTG+AGG 0.573000 7.3:+16211806 MS.gene50480:CDS
CCTGGACAGGCCATTATGTG+GGG 0.578332 7.3:+16215138 MS.gene50480:CDS
ATAAGATTGCAGCAGCAGAA+AGG 0.586569 7.3:+16214694 MS.gene50480:CDS
GCCACAATTGTACGTTCAGA+AGG 0.588538 7.3:+16211633 MS.gene50480:CDS
TCTTTCTGGATTCGGTGCTG+GGG 0.589274 7.3:+16211797 MS.gene50480:CDS
CCTGAAATCATCGACTGCCA+TGG 0.597724 7.3:-16214922 None:intergenic
GAGATTGCCTTCATGTAAGG+TGG 0.599416 7.3:-16211498 None:intergenic
TAGGACCAGCTGTCCCTGCA+AGG 0.606077 7.3:-16214948 None:intergenic
CGTCTCATGAGAATCCCACC+TGG 0.608607 7.3:+16215120 MS.gene50480:CDS
AAAACAAGGTTGATGGCTCA+GGG 0.612241 7.3:+16214997 MS.gene50480:CDS
CACCGAATCCAGAAAGAAGG+CGG 0.612855 7.3:-16211791 None:intergenic
ACAGCTGGTCCTATTTGCAC+CGG 0.613609 7.3:+16214958 MS.gene50480:CDS
AGCCTCCATAACCCCTCCGA+GGG 0.615195 7.3:-16211526 None:intergenic
ATCCCTCGGAGGGGTTATGG+AGG 0.618572 7.3:+16211524 MS.gene50480:CDS
TACAAGGGAATTGCTCATTG+TGG 0.619868 7.3:+16211609 MS.gene50480:CDS
TAAAGGAAGAAGGCCTTCGT+GGG 0.628573 7.3:+16214773 MS.gene50480:CDS
ACCTTCTGAACGTACAATTG+TGG 0.640920 7.3:-16211634 None:intergenic
GCAATCTCTGGATCCCTCGG+AGG 0.641330 7.3:+16211513 MS.gene50480:CDS
ACATAATGGCCTGTCCAGGT+GGG 0.645441 7.3:-16215134 None:intergenic
TGCATTTGAACCCATACGAA+GGG 0.646043 7.3:-16211715 None:intergenic
ATGGCTCAGGGTAGAGAGGG+AGG 0.648106 7.3:+16215009 MS.gene50480:CDS
CACCAGCCCAAAGCCCACGA+AGG 0.653420 7.3:-16214786 None:intergenic
ATACTTCAAAGTCAAATGTG+TGG 0.658781 7.3:-16211691 None:intergenic
GATAGGTCTGGGAATTACAA+GGG 0.663914 7.3:+16211594 MS.gene50480:CDS
AATCTCTGGATCCCTCGGAG+GGG 0.677010 7.3:+16211515 MS.gene50480:CDS
TGTGAAAGCTACCTCAAATG+GGG 0.683403 7.3:-16211844 None:intergenic
CTGCATTTGAACCCATACGA+AGG 0.683413 7.3:-16211716 None:intergenic
CAGCCTCCATAACCCCTCCG+AGG 0.698608 7.3:-16211527 None:intergenic
GGTGGGATTCTCATGAGACG+AGG 0.727268 7.3:-16215117 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTAATAAATGAAGTTT+TGG + chr7.3:16213423-16213442 MS.gene50480:intron 10.0%
!! AAAATAGAAATAGTTTCAAT+TGG + chr7.3:16213631-16213650 MS.gene50480:intron 15.0%
!! AAATAGAAATAGTTTCAATT+GGG + chr7.3:16213632-16213651 MS.gene50480:intron 15.0%
!! AGTAAAAAATAAAATTTGAC+AGG + chr7.3:16214423-16214442 MS.gene50480:intron 15.0%
!! ATTTAAACTAAGAAATATGA+TGG + chr7.3:16213096-16213115 MS.gene50480:intron 15.0%
!! TTAAAAAATACATTAATCAC+AGG - chr7.3:16212827-16212846 None:intergenic 15.0%
!! TTTAAACTAAGAAATATGAT+GGG + chr7.3:16213097-16213116 MS.gene50480:intron 15.0%
!! AAAACTGATATATGTATATG+GGG + chr7.3:16213833-16213852 MS.gene50480:intron 20.0%
!! AAGAGTTATTAGATGAATTA+TGG + chr7.3:16213197-16213216 MS.gene50480:intron 20.0%
!! AATAGAAATAGTTTCAATTG+GGG + chr7.3:16213633-16213652 MS.gene50480:intron 20.0%
!! AGAGTTATTAGATGAATTAT+GGG + chr7.3:16213198-16213217 MS.gene50480:intron 20.0%
!! AGTATGGTTATATAATTAAG+AGG + chr7.3:16212185-16212204 MS.gene50480:intron 20.0%
!! AGTATTATAACAACATAGAT+TGG + chr7.3:16212854-16212873 MS.gene50480:intron 20.0%
!! ATTGAATTGAAAAGAATATG+AGG + chr7.3:16212503-16212522 MS.gene50480:intron 20.0%
!! CAAAACTGATATATGTATAT+GGG + chr7.3:16213832-16213851 MS.gene50480:intron 20.0%
!! GAATAAGAATTCAAACATTA+TGG - chr7.3:16214398-16214417 None:intergenic 20.0%
!! GTAAAATTCATTAGATTACA+TGG + chr7.3:16214569-16214588 MS.gene50480:intron 20.0%
!! GTATTATAACAACATAGATT+GGG + chr7.3:16212855-16212874 MS.gene50480:intron 20.0%
!! TAAAAAAATGAAGGAAAAAG+TGG - chr7.3:16213006-16213025 None:intergenic 20.0%
!! TCAAAACTGATATATGTATA+TGG + chr7.3:16213831-16213850 MS.gene50480:intron 20.0%
!! TGAAATTGATAAATTTGTGA+AGG + chr7.3:16212651-16212670 MS.gene50480:intron 20.0%
!! TTCTTCTGCTTATAAAATAT+GGG - chr7.3:16213471-16213490 None:intergenic 20.0%
!! TTTATAAGCAGAAGAAATTA+TGG + chr7.3:16213475-16213494 MS.gene50480:intron 20.0%
!! TTTCTTCTGCTTATAAAATA+TGG - chr7.3:16213472-16213491 None:intergenic 20.0%
!!! AGAGAAATCTTTCAATTTTT+TGG + chr7.3:16212771-16212790 MS.gene50480:intron 20.0%
!!! CTATTTTAACAATTGAGTAA+GGG - chr7.3:16213618-16213637 None:intergenic 20.0%
!!! TATTTTAACAATTGAGTAAG+GGG - chr7.3:16213617-16213636 None:intergenic 20.0%
!!! TCTATTTTAACAATTGAGTA+AGG - chr7.3:16213619-16213638 None:intergenic 20.0%
! AAAAAGTTTGATGTAGTGTT+GGG + chr7.3:16212265-16212284 MS.gene50480:intron 25.0%
! AAACTGATATATGTATATGG+GGG + chr7.3:16213834-16213853 MS.gene50480:intron 25.0%
! ACAGTATATAATACAAGCTT+GGG - chr7.3:16214653-16214672 None:intergenic 25.0%
! AGTTATTAGATGAATTATGG+GGG + chr7.3:16213200-16213219 MS.gene50480:intron 25.0%
! ATCAATTACACATGAACAAA+AGG + chr7.3:16211958-16211977 MS.gene50480:intron 25.0%
! ATGGTTATATAATTAAGAGG+AGG + chr7.3:16212188-16212207 MS.gene50480:intron 25.0%
! GAAAAAGTGGAAATAATGAA+GGG - chr7.3:16212993-16213012 None:intergenic 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr7.3:16212921-16212940 None:intergenic 25.0%
! GAGTTATTAGATGAATTATG+GGG + chr7.3:16213199-16213218 MS.gene50480:intron 25.0%
! GGTTGTTTATAGCTTATTAT+TGG + chr7.3:16211918-16211937 MS.gene50480:intron 25.0%
! TCCAATTAAAATGTCATTCA+GGG + chr7.3:16212238-16212257 MS.gene50480:intron 25.0%
! TGGTTATATAATTAAGAGGA+GGG + chr7.3:16212189-16212208 MS.gene50480:intron 25.0%
! TTGAAGTAAAGACTTATACT+AGG - chr7.3:16213069-16213088 None:intergenic 25.0%
!! GAATTTTATTCTTCTCCATT+GGG + chr7.3:16214185-16214204 MS.gene50480:intron 25.0%
!! TGAATTTTATTCTTCTCCAT+TGG + chr7.3:16214184-16214203 MS.gene50480:intron 25.0%
!!! AAGCACATCAAAAGTATTTT+TGG - chr7.3:16214863-16214882 None:intergenic 25.0%
!!! AATCTTTCAATTTTTTGGAG+TGG + chr7.3:16212776-16212795 MS.gene50480:intron 25.0%
!!! ATATTCATCAATCTGCTTTT+AGG + chr7.3:16213287-16213306 MS.gene50480:intron 25.0%
!!! ATTGATTTTGTCATCCAAAA+AGG - chr7.3:16212012-16212031 None:intergenic 25.0%
AAGAAGGAATTCTTGCATTA+TGG + chr7.3:16215082-16215101 MS.gene50480:CDS 30.0%
AATACAAATTCCCCCTAATT+TGG - chr7.3:16212946-16212965 None:intergenic 30.0%
ACACTAGATTAGGATGAAAA+AGG + chr7.3:16213262-16213281 MS.gene50480:intron 30.0%
AGAACAATATATGCAGAAGA+AGG + chr7.3:16215066-16215085 MS.gene50480:CDS 30.0%
AGAATAAAATTCAGCTAGCT+AGG - chr7.3:16214177-16214196 None:intergenic 30.0%
AGAGATATTCATGCCAATTA+TGG + chr7.3:16212312-16212331 MS.gene50480:intron 30.0%
ATAACCATACTCAAACTCTA+CGG - chr7.3:16212176-16212195 None:intergenic 30.0%
ATACAAATTCCCCCTAATTT+GGG - chr7.3:16212945-16212964 None:intergenic 30.0%
ATACTTCAAAGTCAAATGTG+TGG - chr7.3:16211694-16211713 None:intergenic 30.0%
ATTGAATATGAAAGCGGAAA+TGG + chr7.3:16213955-16213974 MS.gene50480:intron 30.0%
CAAAAAGTTTGATGTAGTGT+TGG + chr7.3:16212264-16212283 MS.gene50480:intron 30.0%
CACAGTATATAATACAAGCT+TGG - chr7.3:16214654-16214673 None:intergenic 30.0%
CTCCAATTAAAATGTCATTC+AGG + chr7.3:16212237-16212256 MS.gene50480:intron 30.0%
CTCGAAATTGAATATGAAAG+CGG + chr7.3:16213949-16213968 MS.gene50480:intron 30.0%
GAATTATTATTTCCCAGATG+AGG - chr7.3:16214309-16214328 None:intergenic 30.0%
GAGATATTCATGCCAATTAT+GGG + chr7.3:16212313-16212332 MS.gene50480:intron 30.0%
GAGGGTTTGTAAAAAAATGA+AGG - chr7.3:16213015-16213034 None:intergenic 30.0%
GATGATTGTATTGTGTGAAA+TGG + chr7.3:16212459-16212478 MS.gene50480:intron 30.0%
GGAAAAAGTGGAAATAATGA+AGG - chr7.3:16212994-16213013 None:intergenic 30.0%
GGAGGGGAATTAAAAATATT+TGG + chr7.3:16213320-16213339 MS.gene50480:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG - chr7.3:16212924-16212943 None:intergenic 30.0%
GGTTATATAATTAAGAGGAG+GGG + chr7.3:16212190-16212209 MS.gene50480:intron 30.0%
GTCAAGAAATCATTCTGTTA+GGG + chr7.3:16213398-16213417 MS.gene50480:intron 30.0%
GTGTAGCTAATTAAAGCTAT+CGG - chr7.3:16213798-16213817 None:intergenic 30.0%
GTTATTAGATGAATTATGGG+GGG + chr7.3:16213201-16213220 MS.gene50480:intron 30.0%
TAATCAGTGTCCAAGATATT+GGG + chr7.3:16213919-16213938 MS.gene50480:intron 30.0%
TATTGTGTGAAATGGAATAG+AGG + chr7.3:16212467-16212486 MS.gene50480:intron 30.0%
TCGTAAAAACAACATTCCTA+TGG + chr7.3:16212034-16212053 MS.gene50480:intron 30.0%
TCTAATAACTCTTCTAACAC+AGG - chr7.3:16213190-16213209 None:intergenic 30.0%
TTCTGCATATATTGTTCTGA+TGG - chr7.3:16215064-16215083 None:intergenic 30.0%
! AGTACTTCAATCAGCTTTTA+AGG + chr7.3:16211737-16211756 MS.gene50480:CDS 30.0%
! ATACTTTTGATGTGCTTTTG+TGG + chr7.3:16214866-16214885 MS.gene50480:CDS 30.0%
! CTTTTGTGGAAGAAAAATGA+AGG + chr7.3:16214880-16214899 MS.gene50480:CDS 30.0%
! GAATATGAGGATTTGTTCAA+AGG + chr7.3:16212516-16212535 MS.gene50480:intron 30.0%
! TATATACTGTGTTTTTCTGC+AGG + chr7.3:16214663-16214682 MS.gene50480:intron 30.0%
! TGGAAATAATGAAGGGTTTT+GGG - chr7.3:16212986-16213005 None:intergenic 30.0%
!! ACCCTGAATGACATTTTAAT+TGG - chr7.3:16212242-16212261 None:intergenic 30.0%
!! CTTGTTTTCACTACATCAAA+GGG - chr7.3:16214985-16215004 None:intergenic 30.0%
!!! ATAGGAATGTTGTTTTTACG+AGG - chr7.3:16212035-16212054 None:intergenic 30.0%
!!! CTGAATGACATTTTAATTGG+AGG - chr7.3:16212239-16212258 None:intergenic 30.0%
!!! CTTGGTATTTTGAGATTGAT+AGG + chr7.3:16213560-16213579 MS.gene50480:intron 30.0%
!!! TTTTTAGTTCCCCCAAATTA+GGG + chr7.3:16212931-16212950 MS.gene50480:intron 30.0%
!!! TTTTTTAGTTCCCCCAAATT+AGG + chr7.3:16212930-16212949 MS.gene50480:intron 30.0%
AAAGTCAAATGTGTGGCAAA+AGG - chr7.3:16211687-16211706 None:intergenic 35.0%
AATCTGGTCAACACTAGATT+AGG + chr7.3:16213252-16213271 MS.gene50480:intron 35.0%
AATTATGGCAGATCCTAGTA+TGG + chr7.3:16213490-16213509 MS.gene50480:intron 35.0%
ACCTTCTACATAGAGTTCAA+AGG - chr7.3:16212065-16212084 None:intergenic 35.0%
ACTCCTACTATAATGCGTAA+TGG + chr7.3:16214811-16214830 MS.gene50480:CDS 35.0%
ACTGGGAAGATTAGTAATCA+TGG + chr7.3:16211768-16211787 MS.gene50480:CDS 35.0%
AGACTTATACTAGGACTGTT+TGG - chr7.3:16213060-16213079 None:intergenic 35.0%
AGGAAACACAATTGTTAAGG+TGG + chr7.3:16214015-16214034 MS.gene50480:intron 35.0%
ATCAATTCCACCTTACATGA+AGG + chr7.3:16211491-16211510 MS.gene50480:CDS 35.0%
ATCAGCTATGTAAGCATTTC+TGG + chr7.3:16213665-16213684 MS.gene50480:intron 35.0%
ATCTATTGTCAGAGCATGTA+GGG - chr7.3:16214063-16214082 None:intergenic 35.0%
ATGTAAGGAATCAACAGTTC+AGG - chr7.3:16212387-16212406 None:intergenic 35.0%
ATGTGAAAGCTACCTCAAAT+GGG - chr7.3:16211848-16211867 None:intergenic 35.0%
ATTCCTTACATGCATGATGA+AGG + chr7.3:16212396-16212415 MS.gene50480:intron 35.0%
ATTGAAACTGATGCTTACAC+AGG + chr7.3:16213741-16213760 MS.gene50480:intron 35.0%
ATTGTATTGGAGGAGTTTGT+AGG - chr7.3:16212911-16212930 None:intergenic 35.0%
CATATATTGTTCTGATGGCA+TGG - chr7.3:16215059-16215078 None:intergenic 35.0%
CATTTACTTGCACCCATAAT+TGG - chr7.3:16212328-16212347 None:intergenic 35.0%
CCTTCTACATAGAGTTCAAA+GGG - chr7.3:16212064-16212083 None:intergenic 35.0%
CCTTTGATGTAGTGAAAACA+AGG + chr7.3:16214983-16215002 MS.gene50480:CDS 35.0%
CTCTATATTTCAAAAGCTCG+TGG - chr7.3:16214726-16214745 None:intergenic 35.0%
GACTTATACTAGGACTGTTT+GGG - chr7.3:16213059-16213078 None:intergenic 35.0%
GAGATCATATCCCAATATCT+TGG - chr7.3:16213932-16213951 None:intergenic 35.0%
GCTAGGAAACACAATTGTTA+AGG + chr7.3:16214012-16214031 MS.gene50480:intron 35.0%
GGAAACACAATTGTTAAGGT+GGG + chr7.3:16214016-16214035 MS.gene50480:intron 35.0%
GGAATGATCATAAAGGAAGA+AGG + chr7.3:16214763-16214782 MS.gene50480:CDS 35.0%
GGAATTCTTGCATTATGGAA+AGG + chr7.3:16215087-16215106 MS.gene50480:CDS 35.0%
GGTCAAGAAATCATTCTGTT+AGG + chr7.3:16213397-16213416 MS.gene50480:intron 35.0%
GGTGGACAATTTCATTGTAA+GGG + chr7.3:16214206-16214225 MS.gene50480:intron 35.0%
GTAATCAGTGTCCAAGATAT+TGG + chr7.3:16213918-16213937 MS.gene50480:intron 35.0%
GTGGACAATTTCATTGTAAG+GGG + chr7.3:16214207-16214226 MS.gene50480:intron 35.0%
GTTCCATTACGCATTATAGT+AGG - chr7.3:16214817-16214836 None:intergenic 35.0%
TAAAATTCAGCTAGCTAGGA+AGG - chr7.3:16214173-16214192 None:intergenic 35.0%
TAACAGTATGGCTTGAGATT+GGG - chr7.3:16212609-16212628 None:intergenic 35.0%
TACAAATTCCCCCTAATTTG+GGG - chr7.3:16212944-16212963 None:intergenic 35.0%
TATCAATTTCATCCTTCCAG+TGG - chr7.3:16212642-16212661 None:intergenic 35.0%
TCAACAGTTCAGGATAAAAG+TGG - chr7.3:16212377-16212396 None:intergenic 35.0%
TGGAAGAAAAATGAAGGAGA+TGG + chr7.3:16214886-16214905 MS.gene50480:CDS 35.0%
TGTAGTGAAAACAAGGTTGA+TGG + chr7.3:16214990-16215009 MS.gene50480:CDS 35.0%
TTGAAGTATACCCTTCGTAT+GGG + chr7.3:16211705-16211724 MS.gene50480:CDS 35.0%
TTGTATTGGAGGAGTTTGTA+GGG - chr7.3:16212910-16212929 None:intergenic 35.0%
TTGTGCAGGAATGATCATAA+AGG + chr7.3:16214756-16214775 MS.gene50480:CDS 35.0%
TTTGTGGTATAAGGGAATAG+TGG + chr7.3:16214121-16214140 MS.gene50480:intron 35.0%
! ATATTTGGAACACTACACAC+TGG + chr7.3:16213335-16213354 MS.gene50480:intron 35.0%
! GGAAATAATGAAGGGTTTTG+GGG - chr7.3:16212985-16213004 None:intergenic 35.0%
! GTGGAAATAATGAAGGGTTT+TGG - chr7.3:16212987-16213006 None:intergenic 35.0%
! TTTGAAGTATACCCTTCGTA+TGG + chr7.3:16211704-16211723 MS.gene50480:CDS 35.0%
! TTTTATTCTTCTCCATTGGG+TGG + chr7.3:16214188-16214207 MS.gene50480:intron 35.0%
!! CTAGCGAGCTACTTATTTTT+CGG + chr7.3:16214545-16214564 MS.gene50480:intron 35.0%
!! CTTTTAAGGATTCTCAGACT+GGG + chr7.3:16211751-16211770 MS.gene50480:CDS 35.0%
!! GAAATAATGAAGGGTTTTGG+GGG - chr7.3:16212984-16213003 None:intergenic 35.0%
!!! AAATAATGAAGGGTTTTGGG+GGG - chr7.3:16212983-16213002 None:intergenic 35.0%
!!! ATCCAGGTTTCTCCTTTTTT+AGG + chr7.3:16214093-16214112 MS.gene50480:intron 35.0%
!!! CACGAGCTTTTGAAATATAG+AGG + chr7.3:16214724-16214743 MS.gene50480:CDS 35.0%
!!! CCTTGTTTTCACTACATCAA+AGG - chr7.3:16214986-16215005 None:intergenic 35.0%
!!! CTGCTTTTAGGTTAGATGAT+GGG + chr7.3:16213299-16213318 MS.gene50480:intron 35.0%
!!! TCCAGGTTTCTCCTTTTTTA+GGG + chr7.3:16214094-16214113 MS.gene50480:intron 35.0%
!!! TCTGCTTTTAGGTTAGATGA+TGG + chr7.3:16213298-16213317 MS.gene50480:intron 35.0%
!!! TTTTAGGTTAGATGATGGGA+GGG + chr7.3:16213303-16213322 MS.gene50480:intron 35.0%
!!! TTTTAGTTCCCCCAAATTAG+GGG + chr7.3:16212932-16212951 MS.gene50480:intron 35.0%
AAACTCTCAAACAGAGCCTA+GGG - chr7.3:16212700-16212719 None:intergenic 40.0%
AACTCTTCTAACACAGGAAC+AGG - chr7.3:16213184-16213203 None:intergenic 40.0%
ACAAATTCCCCCTAATTTGG+GGG - chr7.3:16212943-16212962 None:intergenic 40.0%
ACCCTAAAAAAGGAGAAACC+TGG - chr7.3:16214098-16214117 None:intergenic 40.0%
ACCTTCTGAACGTACAATTG+TGG - chr7.3:16211637-16211656 None:intergenic 40.0%
ACTCCTTCATCATGCATGTA+AGG - chr7.3:16212402-16212421 None:intergenic 40.0%
ACTCTTCTAACACAGGAACA+GGG - chr7.3:16213183-16213202 None:intergenic 40.0%
AGCAGTTGTCTTATAACCCT+AGG + chr7.3:16212681-16212700 MS.gene50480:intron 40.0%
AGCTGATGCTTTGTCTAGAA+TGG + chr7.3:16213987-16214006 MS.gene50480:intron 40.0%
AGGGTGTGTTTGTGGTATAA+GGG + chr7.3:16214113-16214132 MS.gene50480:intron 40.0%
ATAAGATTGCAGCAGCAGAA+AGG + chr7.3:16214694-16214713 MS.gene50480:CDS 40.0%
ATAGATCCAAATGCTCATCC+AGG + chr7.3:16214077-16214096 MS.gene50480:intron 40.0%
ATGATTTCAGGATTCCTTGC+AGG + chr7.3:16214934-16214953 MS.gene50480:CDS 40.0%
ATGCAATGCAATGCAATCAC+TGG + chr7.3:16211897-16211916 MS.gene50480:intron 40.0%
ATGGGTGCAAGTAAATGATC+AGG + chr7.3:16212331-16212350 MS.gene50480:intron 40.0%
ATGGTAGAGTTCTTCTACCA+TGG + chr7.3:16214905-16214924 MS.gene50480:CDS 40.0%
ATTTCATCCTTCCAGTGGTT+TGG - chr7.3:16212637-16212656 None:intergenic 40.0%
CAATGAAATTGTCCACCCAA+TGG - chr7.3:16214203-16214222 None:intergenic 40.0%
CACAACACTAAAGGCTTTCT+TGG + chr7.3:16213542-16213561 MS.gene50480:intron 40.0%
CACATGAACAAAAGGTAAGC+AGG + chr7.3:16211966-16211985 MS.gene50480:intron 40.0%
CATGCAACCATGATCACAAT+GGG + chr7.3:16212573-16212592 MS.gene50480:intron 40.0%
CCACAAACACACCCTAAAAA+AGG - chr7.3:16214108-16214127 None:intergenic 40.0%
CCCTTTGAACTCTATGTAGA+AGG + chr7.3:16212061-16212080 MS.gene50480:intron 40.0%
CCTATTGCTCACAACACTAA+AGG + chr7.3:16213533-16213552 MS.gene50480:intron 40.0%
CCTTTAGTGTTGTGAGCAAT+AGG - chr7.3:16213536-16213555 None:intergenic 40.0%
CTTAGATCCCATTGTGATCA+TGG - chr7.3:16212583-16212602 None:intergenic 40.0%
GATAGGTCTGGGAATTACAA+GGG + chr7.3:16211594-16211613 MS.gene50480:CDS 40.0%
GATCTATTGTCAGAGCATGT+AGG - chr7.3:16214064-16214083 None:intergenic 40.0%
GATGTGAAAGCTACCTCAAA+TGG - chr7.3:16211849-16211868 None:intergenic 40.0%
GCACACTTGTACATAAATGG+GGG + chr7.3:16213856-16213875 MS.gene50480:intron 40.0%
GGCACACTTGTACATAAATG+GGG + chr7.3:16213855-16213874 MS.gene50480:intron 40.0%
GGGCACACTTGTACATAAAT+GGG + chr7.3:16213854-16213873 MS.gene50480:intron 40.0%
GGGTGGACAATTTCATTGTA+AGG + chr7.3:16214205-16214224 MS.gene50480:intron 40.0%
GTAACAGTATGGCTTGAGAT+TGG - chr7.3:16212610-16212629 None:intergenic 40.0%
GTGGGAAACGCAATTGTTAA+GGG + chr7.3:16214034-16214053 MS.gene50480:intron 40.0%
TAAGATTGCAGCAGCAGAAA+GGG + chr7.3:16214695-16214714 MS.gene50480:CDS 40.0%
TACAAGGGAATTGCTCATTG+TGG + chr7.3:16211609-16211628 MS.gene50480:CDS 40.0%
TAGGGTGTGTTTGTGGTATA+AGG + chr7.3:16214112-16214131 MS.gene50480:intron 40.0%
TATGCCGTAGAGTTTGAGTA+TGG + chr7.3:16212169-16212188 MS.gene50480:intron 40.0%
TGACCTCTACAGCTCTATAT+GGG - chr7.3:16213382-16213401 None:intergenic 40.0%
TGATAGGTCTGGGAATTACA+AGG + chr7.3:16211593-16211612 MS.gene50480:CDS 40.0%
TGATTTCAGGATTCCTTGCA+GGG + chr7.3:16214935-16214954 MS.gene50480:CDS 40.0%
TGCATTTGAACCCATACGAA+GGG - chr7.3:16211718-16211737 None:intergenic 40.0%
TGTCAAGGACAAACTATGCA+TGG - chr7.3:16214622-16214641 None:intergenic 40.0%
TGTCATCCAAAAAGGTCTAG+CGG - chr7.3:16212004-16212023 None:intergenic 40.0%
TGTGAAAGCTACCTCAAATG+GGG - chr7.3:16211847-16211866 None:intergenic 40.0%
TTATTTCCCAGATGAGGCTT+AGG - chr7.3:16214303-16214322 None:intergenic 40.0%
TTGACCTCTACAGCTCTATA+TGG - chr7.3:16213383-16213402 None:intergenic 40.0%
TTTCACTACATCAAAGGGAC+CGG - chr7.3:16214980-16214999 None:intergenic 40.0%
TTTCATCCTTCCAGTGGTTT+GGG - chr7.3:16212636-16212655 None:intergenic 40.0%
! ACCAGATTTAAGATCCAACC+TGG - chr7.3:16213240-16213259 None:intergenic 40.0%
! ACTGATGCTTACACAGGTTT+TGG + chr7.3:16213747-16213766 MS.gene50480:intron 40.0%
! ATACTGTGTTTTTCTGCAGG+TGG + chr7.3:16214666-16214685 MS.gene50480:intron 40.0%
! CAGATTTAAGATCCAACCTG+GGG - chr7.3:16213238-16213257 None:intergenic 40.0%
! CATAGTTTGTCCTTGACATG+TGG + chr7.3:16214624-16214643 MS.gene50480:intron 40.0%
! CCAGATTTAAGATCCAACCT+GGG - chr7.3:16213239-16213258 None:intergenic 40.0%
! CTGATGCTTACACAGGTTTT+GGG + chr7.3:16213748-16213767 MS.gene50480:intron 40.0%
! TAGCTAGGAAGGAACTTTTG+AGG - chr7.3:16214162-16214181 None:intergenic 40.0%
! TGATGCTTACACAGGTTTTG+GGG + chr7.3:16213749-16213768 MS.gene50480:intron 40.0%
! TTTAGTTCCCCCAAATTAGG+GGG + chr7.3:16212933-16212952 MS.gene50480:intron 40.0%
!! AAAACAAGGTTGATGGCTCA+GGG + chr7.3:16214997-16215016 MS.gene50480:CDS 40.0%
!! ATGATCAGGTGGTGGAAATT+AGG + chr7.3:16212345-16212364 MS.gene50480:intron 40.0%
!! CTACACACTGGTTTATAGTG+TGG + chr7.3:16213347-16213366 MS.gene50480:intron 40.0%
!! CTGGTCTTGATGACATCAAT+TGG - chr7.3:16211564-16211583 None:intergenic 40.0%
!! CTTTCTAGGGAAAGGAGTTT+TGG + chr7.3:16213884-16213903 MS.gene50480:intron 40.0%
!! GACTGTTTGGGAGTTTTTAG+AGG - chr7.3:16213047-16213066 None:intergenic 40.0%
!! GCATACTCTAAAGTCCCTTT+GGG - chr7.3:16212154-16212173 None:intergenic 40.0%
!! GCTTTTAAGGATTCTCAGAC+TGG + chr7.3:16211750-16211769 MS.gene50480:CDS 40.0%
!! GTTTGGGAGTTTTTAGAGGA+GGG - chr7.3:16213043-16213062 None:intergenic 40.0%
!! TGTTTGGGAGTTTTTAGAGG+AGG - chr7.3:16213044-16213063 None:intergenic 40.0%
!! TTTAGGTTAGATGATGGGAG+GGG + chr7.3:16213304-16213323 MS.gene50480:intron 40.0%
!! TTTGGGAGTTTTTAGAGGAG+GGG - chr7.3:16213042-16213061 None:intergenic 40.0%
!!! CCTTTTTTAGGGTGTGTTTG+TGG + chr7.3:16214105-16214124 MS.gene50480:intron 40.0%
!!! CTTTTAGGTTAGATGATGGG+AGG + chr7.3:16213302-16213321 MS.gene50480:intron 40.0%
AAATGGGGGCAGTACTTTCT+AGG + chr7.3:16213870-16213889 MS.gene50480:intron 45.0%
AAGATCCAACCTGGGGAATT+AGG - chr7.3:16213231-16213250 None:intergenic 45.0%
AATGGGGGCAGTACTTTCTA+GGG + chr7.3:16213871-16213890 MS.gene50480:intron 45.0%
ACAACGACAACAAAGCCACT+TGG + chr7.3:16214344-16214363 MS.gene50480:intron 45.0%
AGACCAGATTGCAGCTTGAT+AGG + chr7.3:16211577-16211596 MS.gene50480:CDS 45.0%
AGACCTATCAAGCTGCAATC+TGG - chr7.3:16211583-16211602 None:intergenic 45.0%
AGATTGCAGCTTGATAGGTC+TGG + chr7.3:16211582-16211601 MS.gene50480:CDS 45.0%
AGCACACTTCAACCCATAAC+AGG + chr7.3:16213155-16213174 MS.gene50480:intron 45.0%
AGGAACAGGGAACCTGTTAT+GGG - chr7.3:16213170-16213189 None:intergenic 45.0%
AGGTGTACGTGCTTTATGGA+AGG + chr7.3:16211653-16211672 MS.gene50480:CDS 45.0%
AGTCCCATATAGAGCTGTAG+AGG + chr7.3:16213376-16213395 MS.gene50480:intron 45.0%
ATAAAGGAAGAAGGCCTTCG+TGG + chr7.3:16214772-16214791 MS.gene50480:CDS 45.0%
ATCATTCCTGCACAATGCAC+AGG - chr7.3:16214751-16214770 None:intergenic 45.0%
CAAACTCTCAAACAGAGCCT+AGG - chr7.3:16212701-16212720 None:intergenic 45.0%
CCAGAGATTGCCTTCATGTA+AGG - chr7.3:16211504-16211523 None:intergenic 45.0%
CCATGCAACCATGATCACAA+TGG + chr7.3:16212572-16212591 MS.gene50480:intron 45.0%
CCATTGTGATCATGGTTGCA+TGG - chr7.3:16212575-16212594 None:intergenic 45.0%
CCTTACATGAAGGCAATCTC+TGG + chr7.3:16211501-16211520 MS.gene50480:CDS 45.0%
CTAGGCTCTGTTTGAGAGTT+TGG + chr7.3:16212699-16212718 MS.gene50480:intron 45.0%
CTCGCTAGTGCAATCACTTA+AGG - chr7.3:16214533-16214552 None:intergenic 45.0%
CTCTGTTTGAGAGTTTGGAG+GGG + chr7.3:16212704-16212723 MS.gene50480:intron 45.0%
CTGCATTTGAACCCATACGA+AGG - chr7.3:16211719-16211738 None:intergenic 45.0%
GAGAAACCTGGATGAGCATT+TGG - chr7.3:16214086-16214105 None:intergenic 45.0%
GAGATTGCCTTCATGTAAGG+TGG - chr7.3:16211501-16211520 None:intergenic 45.0%
GAGTATCCTAAGCCTCATCT+GGG + chr7.3:16214294-16214313 MS.gene50480:intron 45.0%
GAGTTCAAAGGGTCATCCAT+AGG - chr7.3:16212053-16212072 None:intergenic 45.0%
GATGAAGGAGTTGTGAAGAG+AGG + chr7.3:16212411-16212430 MS.gene50480:intron 45.0%
GATTGCAGCTTGATAGGTCT+GGG + chr7.3:16211583-16211602 MS.gene50480:CDS 45.0%
GCAAGTAAATGATCAGGTGG+TGG + chr7.3:16212337-16212356 MS.gene50480:intron 45.0%
GCAGTGTCAGTATTAGATCG+AGG + chr7.3:16214232-16214251 MS.gene50480:intron 45.0%
GCATGGTCACAACATCTTTG+TGG - chr7.3:16212558-16212577 None:intergenic 45.0%
GCCACAATTGTACGTTCAGA+AGG + chr7.3:16211633-16211652 MS.gene50480:CDS 45.0%
GCTCTGTTTGAGAGTTTGGA+GGG + chr7.3:16212703-16212722 MS.gene50480:intron 45.0%
GGAGGTGAAGTGAAGTACAA+GGG + chr7.3:16215027-16215046 MS.gene50480:CDS 45.0%
GGGGCACACTTGTACATAAA+TGG + chr7.3:16213853-16213872 MS.gene50480:intron 45.0%
GGTGCAAGTAAATGATCAGG+TGG + chr7.3:16212334-16212353 MS.gene50480:intron 45.0%
GGTGGGAAACGCAATTGTTA+AGG + chr7.3:16214033-16214052 MS.gene50480:intron 45.0%
GGTGTACGTGCTTTATGGAA+GGG + chr7.3:16211654-16211673 MS.gene50480:CDS 45.0%
GGTGTGGCTGATCAAGTAAT+TGG + chr7.3:16215159-16215178 MS.gene50480:CDS 45.0%
TAAAGGAAGAAGGCCTTCGT+GGG + chr7.3:16214773-16214792 MS.gene50480:CDS 45.0%
TAGTATGGTGAAGGCGATCA+AGG + chr7.3:16213505-16213524 MS.gene50480:intron 45.0%
TGTCATTGTCACCCCATTTG+AGG + chr7.3:16211833-16211852 MS.gene50480:CDS 45.0%
TTGATCGCCTTCACCATACT+AGG - chr7.3:16213506-16213525 None:intergenic 45.0%
TTTGAGAGTTTGGAGGGGAA+GGG + chr7.3:16212709-16212728 MS.gene50480:intron 45.0%
! AGAGTATCCTAAGCCTCATC+TGG + chr7.3:16214293-16214312 MS.gene50480:intron 45.0%
! CAGAAGGTGTACGTGCTTTA+TGG + chr7.3:16211649-16211668 MS.gene50480:CDS 45.0%
! CCCAGGTTGGATCTTAAATC+TGG + chr7.3:16213236-16213255 MS.gene50480:intron 45.0%
! CTTTGTCTAGAATGGTCGCT+AGG + chr7.3:16213995-16214014 MS.gene50480:intron 45.0%
! GAGGAGTTTGTAGGGTTTTG+GGG - chr7.3:16212902-16212921 None:intergenic 45.0%
! GGAGGAGTTTGTAGGGTTTT+GGG - chr7.3:16212903-16212922 None:intergenic 45.0%
! TGGAGGAGTTTGTAGGGTTT+TGG - chr7.3:16212904-16212923 None:intergenic 45.0%
! TGTAGTGTTGGGCTATGAGT+AGG + chr7.3:16212276-16212295 MS.gene50480:intron 45.0%
!! AGGAGTTTGTAGGGTTTTGG+GGG - chr7.3:16212901-16212920 None:intergenic 45.0%
!! GAAAACAAGGTTGATGGCTC+AGG + chr7.3:16214996-16215015 MS.gene50480:CDS 45.0%
!! GGCATACTCTAAAGTCCCTT+TGG - chr7.3:16212155-16212174 None:intergenic 45.0%
!! TACTCTAAAGTCCCTTTGGG+AGG - chr7.3:16212151-16212170 None:intergenic 45.0%
!! TTCTTTCTGGATTCGGTGCT+GGG + chr7.3:16211796-16211815 MS.gene50480:CDS 45.0%
!! TTTTGGAGGGATGGGATTAG+AGG + chr7.3:16212741-16212760 MS.gene50480:intron 45.0%
AAGGCAATCTCTGGATCCCT+CGG + chr7.3:16211510-16211529 MS.gene50480:CDS 50.0%
AATCATGGCCGCCTTCTTTC+TGG + chr7.3:16211783-16211802 MS.gene50480:CDS 50.0%
ACAGCTGGTCCTATTTGCAC+CGG + chr7.3:16214958-16214977 MS.gene50480:CDS 50.0%
ACATAATGGCCTGTCCAGGT+GGG - chr7.3:16215137-16215156 None:intergenic 50.0%
ACCTGGACAGGCCATTATGT+GGG + chr7.3:16215137-16215156 MS.gene50480:CDS 50.0%
ACGACAACAAAGCCACTTGG+CGG + chr7.3:16214347-16214366 MS.gene50480:intron 50.0%
ATCAGCCACACCCCACATAA+TGG - chr7.3:16215151-16215170 None:intergenic 50.0%
CACCGAATCCAGAAAGAAGG+CGG - chr7.3:16211794-16211813 None:intergenic 50.0%
CAGGAACAGGGAACCTGTTA+TGG - chr7.3:16213171-16213190 None:intergenic 50.0%
CCATGGCAGTCGATGATTTC+AGG + chr7.3:16214922-16214941 MS.gene50480:CDS 50.0%
GAGTTGTGAAGAGAGGCTAC+AGG + chr7.3:16212418-16212437 MS.gene50480:intron 50.0%
GCTTACCTAATTCCCCAGGT+TGG + chr7.3:16213223-16213242 MS.gene50480:intron 50.0%
GCTTGGGATTCCACATGTCA+AGG - chr7.3:16214637-16214656 None:intergenic 50.0%
GGCAGATCCTAGTATGGTGA+AGG + chr7.3:16213496-16213515 MS.gene50480:intron 50.0%
GGCTCTGTTTGAGAGTTTGG+AGG + chr7.3:16212702-16212721 MS.gene50480:intron 50.0%
GGGAGGTGAAGTGAAGTACA+AGG + chr7.3:16215026-16215045 MS.gene50480:CDS 50.0%
GGTTTGGGTGGGTAACAGTA+TGG - chr7.3:16212621-16212640 None:intergenic 50.0%
GTTTGAGAGTTTGGAGGGGA+AGG + chr7.3:16212708-16212727 MS.gene50480:intron 50.0%
TCAAAGGGACCGGTGCAAAT+AGG - chr7.3:16214970-16214989 None:intergenic 50.0%
TTGGGCTATGAGTAGGTGGA+GGG + chr7.3:16212283-16212302 MS.gene50480:intron 50.0%
TTTGCTCTCGTCCTCCCAAA+GGG + chr7.3:16212137-16212156 MS.gene50480:intron 50.0%
! AGTGTTGGGCTATGAGTAGG+TGG + chr7.3:16212279-16212298 MS.gene50480:intron 50.0%
! ATCCTTCCAGTGGTTTGGGT+GGG - chr7.3:16212632-16212651 None:intergenic 50.0%
! CAGCACCGAATCCAGAAAGA+AGG - chr7.3:16211797-16211816 None:intergenic 50.0%
! CCTGAAATCATCGACTGCCA+TGG - chr7.3:16214925-16214944 None:intergenic 50.0%
! GGGCAGTACTTTCTAGGGAA+AGG + chr7.3:16213876-16213895 MS.gene50480:intron 50.0%
! TTGATGGCTCAGGGTAGAGA+GGG + chr7.3:16215006-16215025 MS.gene50480:CDS 50.0%
!! CTTCTTTCTGGATTCGGTGC+TGG + chr7.3:16211795-16211814 MS.gene50480:CDS 50.0%
!! GAGTTTTTAGAGGAGGGGAG+GGG - chr7.3:16213037-16213056 None:intergenic 50.0%
!! GGAGTTTTTAGAGGAGGGGA+GGG - chr7.3:16213038-16213057 None:intergenic 50.0%
!! TCTTTCTGGATTCGGTGCTG+GGG + chr7.3:16211797-16211816 MS.gene50480:CDS 50.0%
!!! GGAGTTTGTAGGGTTTTGGG+GGG - chr7.3:16212900-16212919 None:intergenic 50.0%
!!! TGTAGGGTTTTGGGGGGTTT+GGG - chr7.3:16212894-16212913 None:intergenic 50.0%
!!! TTGTAGGGTTTTGGGGGGTT+TGG - chr7.3:16212895-16212914 None:intergenic 50.0%
AAGAAGGCCTTCGTGGGCTT+TGG + chr7.3:16214779-16214798 MS.gene50480:CDS 55.0%
AATCTCTGGATCCCTCGGAG+GGG + chr7.3:16211515-16211534 MS.gene50480:CDS 55.0%
ACAGGCCATTATGTGGGGTG+TGG + chr7.3:16215143-16215162 MS.gene50480:CDS 55.0%
AGAAGGCCTTCGTGGGCTTT+GGG + chr7.3:16214780-16214799 MS.gene50480:CDS 55.0%
AGAGGTCCTGTGCATTGTGC+AGG + chr7.3:16214742-16214761 MS.gene50480:CDS 55.0%
AGAGTTTGGAGGGGAAGGGA+GGG + chr7.3:16212713-16212732 MS.gene50480:intron 55.0%
CAATCTCTGGATCCCTCGGA+GGG + chr7.3:16211514-16211533 MS.gene50480:CDS 55.0%
CACATAATGGCCTGTCCAGG+TGG - chr7.3:16215138-16215157 None:intergenic 55.0%
CACCTGGACAGGCCATTATG+TGG + chr7.3:16215136-16215155 MS.gene50480:CDS 55.0%
CATGAGAATCCCACCTGGAC+AGG + chr7.3:16215125-16215144 MS.gene50480:CDS 55.0%
CCTGGACAGGCCATTATGTG+GGG + chr7.3:16215138-16215157 MS.gene50480:CDS 55.0%
CGACAACAAAGCCACTTGGC+GGG + chr7.3:16214348-16214367 MS.gene50480:intron 55.0%
CGTCTCATGAGAATCCCACC+TGG + chr7.3:16215120-16215139 MS.gene50480:CDS 55.0%
CTGTTACCCACCCAAACCAC+TGG + chr7.3:16212623-16212642 MS.gene50480:intron 55.0%
GACAACAAAGCCACTTGGCG+GGG + chr7.3:16214349-16214368 MS.gene50480:intron 55.0%
GGCCGCCTTCTTTCTGGATT+CGG + chr7.3:16211789-16211808 MS.gene50480:CDS 55.0%
GGGCTGTTCTGATGCAACAG+GGG + chr7.3:16213769-16213788 MS.gene50480:intron 55.0%
GGGGCTGTTCTGATGCAACA+GGG + chr7.3:16213768-16213787 MS.gene50480:intron 55.0%
GGTGGGATTCTCATGAGACG+AGG - chr7.3:16215120-16215139 None:intergenic 55.0%
GTTGGGCTATGAGTAGGTGG+AGG + chr7.3:16212282-16212301 MS.gene50480:intron 55.0%
GTTTGCTCTCGTCCTCCCAA+AGG + chr7.3:16212136-16212155 MS.gene50480:intron 55.0%
TACCCACCCAAACCACTGGA+AGG + chr7.3:16212627-16212646 MS.gene50480:intron 55.0%
TATGAGTAGGTGGAGGGGGT+AGG + chr7.3:16212289-16212308 MS.gene50480:intron 55.0%
TGGGCTATGAGTAGGTGGAG+GGG + chr7.3:16212284-16212303 MS.gene50480:intron 55.0%
TGGGGCTGTTCTGATGCAAC+AGG + chr7.3:16213767-16213786 MS.gene50480:intron 55.0%
! CATCCTTCCAGTGGTTTGGG+TGG - chr7.3:16212633-16212652 None:intergenic 55.0%
!! ATTCGGTGCTGGGGTTCTTG+AGG + chr7.3:16211806-16211825 MS.gene50480:CDS 55.0%
!! GGGAGTTTTTAGAGGAGGGG+AGG - chr7.3:16213039-16213058 None:intergenic 55.0%
!! GTTGATGGCTCAGGGTAGAG+AGG + chr7.3:16215005-16215024 MS.gene50480:CDS 55.0%
!! TTTTAGAGGAGGGGAGGGGA+GGG - chr7.3:16213033-16213052 None:intergenic 55.0%
!! TTTTTAGAGGAGGGGAGGGG+AGG - chr7.3:16213034-16213053 None:intergenic 55.0%
ACAAAGCCACTTGGCGGGGT+TGG + chr7.3:16214353-16214372 MS.gene50480:intron 60.0%
AGCCTCCATAACCCCTCCGA+GGG - chr7.3:16211529-16211548 None:intergenic 60.0%
ATCCCTCGGAGGGGTTATGG+AGG + chr7.3:16211524-16211543 MS.gene50480:CDS 60.0%
ATGGCTCAGGGTAGAGAGGG+AGG + chr7.3:16215009-16215028 MS.gene50480:CDS 60.0%
ATGTAGCCAACCCCGCCAAG+TGG - chr7.3:16214362-16214381 None:intergenic 60.0%
CCCCACATAATGGCCTGTCC+AGG - chr7.3:16215141-16215160 None:intergenic 60.0%
GAGAGTTTGGAGGGGAAGGG+AGG + chr7.3:16212712-16212731 MS.gene50480:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + chr7.3:16212714-16212733 MS.gene50480:intron 60.0%
GCAATCTCTGGATCCCTCGG+AGG + chr7.3:16211513-16211532 MS.gene50480:CDS 60.0%
GGATTCCTTGCAGGGACAGC+TGG + chr7.3:16214943-16214962 MS.gene50480:CDS 60.0%
GGGCTATGAGTAGGTGGAGG+GGG + chr7.3:16212285-16212304 MS.gene50480:intron 60.0%
GGGGGCTTACCTAATTCCCC+AGG + chr7.3:16213219-16213238 MS.gene50480:intron 60.0%
TAGGACCAGCTGTCCCTGCA+AGG - chr7.3:16214951-16214970 None:intergenic 60.0%
TGGATCCCTCGGAGGGGTTA+TGG + chr7.3:16211521-16211540 MS.gene50480:CDS 60.0%
! GCTGCGCCGCTAGACCTTTT+TGG + chr7.3:16211995-16212014 MS.gene50480:intron 60.0%
!! AAGGGAGGGGAGGGTTTTGG+AGG + chr7.3:16212727-16212746 MS.gene50480:intron 60.0%
!!! AGGGAGGGGAGGGTTTTGGA+GGG + chr7.3:16212728-16212747 MS.gene50480:intron 60.0%
!!! AGGGGAGGGTTTTGGAGGGA+TGG + chr7.3:16212732-16212751 MS.gene50480:intron 60.0%
!!! GGGGAGGGTTTTGGAGGGAT+GGG + chr7.3:16212733-16212752 MS.gene50480:intron 60.0%
CACCAGCCCAAAGCCCACGA+AGG - chr7.3:16214789-16214808 None:intergenic 65.0%
CAGCCTCCATAACCCCTCCG+AGG - chr7.3:16211530-16211549 None:intergenic 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG + chr7.3:16212718-16212737 MS.gene50480:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG + chr7.3:16212717-16212736 MS.gene50480:intron 65.0%
! GGGAAGGGAGGGGAGGGTTT+TGG + chr7.3:16212724-16212743 MS.gene50480:intron 65.0%
!! GGCCTTCGTGGGCTTTGGGC+TGG + chr7.3:16214784-16214803 MS.gene50480:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 16211453 16215215 16211453 ID=MS.gene50480
chr7.3 mRNA 16211453 16215215 16211453 ID=MS.gene50480.t1;Parent=MS.gene50480
chr7.3 exon 16211453 16211854 16211453 ID=MS.gene50480.t1.exon1;Parent=MS.gene50480.t1
chr7.3 CDS 16211453 16211854 16211453 ID=cds.MS.gene50480.t1;Parent=MS.gene50480.t1
chr7.3 exon 16214685 16215215 16214685 ID=MS.gene50480.t1.exon2;Parent=MS.gene50480.t1
chr7.3 CDS 16214685 16215215 16214685 ID=cds.MS.gene50480.t1;Parent=MS.gene50480.t1
Gene Sequence

>MS.gene50480

ATGTATCAACAAGTTGCGCAGCAAGATAGCAGTAAGAAATCAATTCCACCTTACATGAAGGCAATCTCTGGATCCCTCGGAGGGGTTATGGAGGCTGCTTGTCTGCAACCAATTGATGTCATCAAGACCAGATTGCAGCTTGATAGGTCTGGGAATTACAAGGGAATTGCTCATTGTGGTGCCACAATTGTACGTTCAGAAGGTGTACGTGCTTTATGGAAGGGTTTAACACCTTTTGCCACACATTTGACTTTGAAGTATACCCTTCGTATGGGTTCAAATGCAGTACTTCAATCAGCTTTTAAGGATTCTCAGACTGGGAAGATTAGTAATCATGGCCGCCTTCTTTCTGGATTCGGTGCTGGGGTTCTTGAGGCTGTTGTCATTGTCACCCCATTTGAGGTAGCTTTCACATCTTTATTTTACTTTTTTATATGCAATGCAATGCAATGCAATGCAATCACTGGTTGTTTATAGCTTATTATTGGTAACATTTATATCGAGAATCAATTACACATGAACAAAAGGTAAGCAGGCAACAAGCTGCGCCGCTAGACCTTTTTGGATGACAAAATCAATCCTCGTAAAAACAACATTCCTATGGATGACCCTTTGAACTCTATGTAGAAGGTCAAATGCAACAAGTGTATCATTAAATTAAATTTGAATTAACACAATCGAGAGTTTGCTCTCGTCCTCCCAAAGGGACTTTAGAGTATGCCGTAGAGTTTGAGTATGGTTATATAATTAAGAGGAGGGGACACATAGTAACAAAGTAGAAAACCTCCAATTAAAATGTCATTCAGGGTTTCAAAAAGTTTGATGTAGTGTTGGGCTATGAGTAGGTGGAGGGGGTAGGAGAGATATTCATGCCAATTATGGGTGCAAGTAAATGATCAGGTGGTGGAAATTAGGAGAGATCCACTTTTATCCTGAACTGTTGATTCCTTACATGCATGATGAAGGAGTTGTGAAGAGAGGCTACAGGTTACTTTATTGAGTTTGAGATGATTGTATTGTGTGAAATGGAATAGAGGTATTAGAAGAACTATTGAATTGAAAAGAATATGAGGATTTGTTCAAAGGAGCAGTAAAATTGCATCCACAAAGATGTTGTGACCATGCAACCATGATCACAATGGGATCTAAGATTCCCAATCTCAAGCCATACTGTTACCCACCCAAACCACTGGAAGGATGAAATTGATAAATTTGTGAAGGATATGTTAGCAGTTGTCTTATAACCCTAGGCTCTGTTTGAGAGTTTGGAGGGGAAGGGAGGGGAGGGTTTTGGAGGGATGGGATTAGAGGAAAAAATAGAGAAATCTTTCAATTTTTTGGAGTGGTTTTGTAGAGAATGATAAATAAATACCTGTGATTAATGTATTTTTTAACTTTGAAAGTATTATAACAACATAGATTGGGCTTGAAAAACTTACCCAAACCCCCCAAAACCCTACAAACTCCTCCAATACAATTTTTTAGTTCCCCCAAATTAGGGGGAATTTGTATTATGAAGAAAACTAACCCCCCAAAACCCTTCATTATTTCCACTTTTTCCTTCATTTTTTTACAAACCCTCCCCTCCCCTCCTCTAAAAACTCCCAAACAGTCCTAGTATAAGTCTTTACTTCAATTAATCAATTTAAACTAAGAAATATGATGGGAGTTAGTGTTTTCGTACAGTGCATTGAACAACACTAGCACACTTCAACCCATAACAGGTTCCCTGTTCCTGTGTTAGAAGAGTTATTAGATGAATTATGGGGGGCTTACCTAATTCCCCAGGTTGGATCTTAAATCTGGTCAACACTAGATTAGGATGAAAAAGGTGATATTCATCAATCTGCTTTTAGGTTAGATGATGGGAGGGGAATTAAAAATATTTGGAACACTACACACTGGTTTATAGTGTGGATCAACAGTCCCATATAGAGCTGTAGAGGTCAAGAAATCATTCTGTTAGGGAAAATATTAATAAATGAAGTTTTGGAGTAACGCAACTTGAACATTTGCCCATATTTTATAAGCAGAAGAAATTATGGCAGATCCTAGTATGGTGAAGGCGATCAAGGAGTAGCCTATTGCTCACAACACTAAAGGCTTTCTTGGTATTTTGAGATTGATAGGTTTTTGTAGTATTTATGCAATTATCGCGAATCCCCTTACTCAATTGTTAAAATAGAAATAGTTTCAATTGGGGCGAAGAGCTATCAGCTATGTAAGCATTTCTGGTTTTTGAACAAAGCGACGACAGATTTCTGCAAAATTTCAAGTTACTATTTGTGATTGAAACTGATGCTTACACAGGTTTTGGGGCTGTTCTGATGCAACAGGGGAAGCCGATAGCTTTAATTAGCTACACTTTCTCTGATAAATCAAAACTGATATATGTATATGGGGGCACACTTGTACATAAATGGGGGCAGTACTTTCTAGGGAAAGGAGTTTTGGAGTGAACAACAGTAATCAGTGTCCAAGATATTGGGATATGATCTCGAAATTGAATATGAAAGCGGAAATGGAAATTGAGCAGCTGATGCTTTGTCTAGAATGGTCGCTAGGAAACACAATTGTTAAGGTGGGAAACGCAATTGTTAAGGGCAACCCTACATGCTCTGACAATAGATCCAAATGCTCATCCAGGTTTCTCCTTTTTTAGGGTGTGTTTGTGGTATAAGGGAATAGTGGTGATGTCATCTCAATCCTCAAAAGTTCCTTCCTAGCTAGCTGAATTTTATTCTTCTCCATTGGGTGGACAATTTCATTGTAAGGGGCAGCAGTGTCAGTATTAGATCGAGGATAACTCGTTTAATTCATTTTGCAGTATATATCTATTGAGAGTATCCTAAGCCTCATCTGGGAAATAATAATTCTTATTCTTTACAACAACAACGACAACAAAGCCACTTGGCGGGGTTGGCTACATGAATCAAATTACGCCATAATGTTTGAATTCTTATTCTTACAAGTAAAAAATAAAATTTGACAGGTCTTATACACATGCTTATTGAAACAAGATATCTTGTGTGTTGCAACTTGTAACTACGACTACATGCTGCTAATTTTTTTAGTTGCCTTAAGTGATTGCACTAGCGAGCTACTTATTTTTCGGTGTAAAATTCATTAGATTACATGGCTATTCAGCATATAACATCTCAAACATCCATGCATAGTTTGTCCTTGACATGTGGAATCCCAAGCTTGTATTATATACTGTGTTTTTCTGCAGGTGGTGAAGATAAGATTGCAGCAGCAGAAAGGGCTAAGCCACGAGCTTTTGAAATATAGAGGTCCTGTGCATTGTGCAGGAATGATCATAAAGGAAGAAGGCCTTCGTGGGCTTTGGGCTGGTGTTACTCCTACTATAATGCGTAATGGAACAAATCAATCTGTCATGTTTACTGCCAAAAATACTTTTGATGTGCTTTTGTGGAAGAAAAATGAAGGAGATGGTAGAGTTCTTCTACCATGGCAGTCGATGATTTCAGGATTCCTTGCAGGGACAGCTGGTCCTATTTGCACCGGTCCCTTTGATGTAGTGAAAACAAGGTTGATGGCTCAGGGTAGAGAGGGAGGTGAAGTGAAGTACAAGGGTATGATCCATGCCATCAGAACAATATATGCAGAAGAAGGAATTCTTGCATTATGGAAAGGTCTGTTACCTCGTCTCATGAGAATCCCACCTGGACAGGCCATTATGTGGGGTGTGGCTGATCAAGTAATTGGTTTGTATGAGAGAAGATATCTTCAAACTTCATGA

Protein sequence

>MS.gene50480.t1

MYQQVAQQDSSKKSIPPYMKAISGSLGGVMEAACLQPIDVIKTRLQLDRSGNYKGIAHCGATIVRSEGVRALWKGLTPFATHLTLKYTLRMGSNAVLQSAFKDSQTGKISNHGRLLSGFGAGVLEAVVIVTPFEVVKIRLQQQKGLSHELLKYRGPVHCAGMIIKEEGLRGLWAGVTPTIMRNGTNQSVMFTAKNTFDVLLWKKNEGDGRVLLPWQSMISGFLAGTAGPICTGPFDVVKTRLMAQGREGGEVKYKGMIHAIRTIYAEEGILALWKGLLPRLMRIPPGQAIMWGVADQVIGLYERRYLQTS