Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50483.t1 | XP_013449734.1 | 97.6 | 374 | 8 | 1 | 1 | 374 | 1 | 373 | 2.40E-205 | 724.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50483.t1 | Q8H1F6 | 62.6 | 366 | 122 | 5 | 22 | 373 | 7 | 371 | 3.0e-127 | 456.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50483.t1 | A0A072U235 | 97.6 | 374 | 8 | 1 | 1 | 374 | 1 | 373 | 1.8e-205 | 724.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051582 | MS.gene50483 | 0.816782 | 4.63E-52 | -1.69E-46 |
| MS.gene054917 | MS.gene50483 | 0.817151 | 3.83E-52 | -1.69E-46 |
| MS.gene056497 | MS.gene50483 | 0.824178 | 9.29E-54 | -1.69E-46 |
| MS.gene059247 | MS.gene50483 | 0.804591 | 2.01E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50483.t1 | MTR_7g094890 | 97.594 | 374 | 8 | 1 | 1 | 374 | 1 | 373 | 0.0 | 739 |
| MS.gene50483.t1 | MTR_7g091320 | 30.222 | 225 | 137 | 5 | 98 | 309 | 24 | 241 | 1.15e-23 | 99.8 |
| MS.gene50483.t1 | MTR_7g091320 | 30.222 | 225 | 137 | 5 | 98 | 309 | 24 | 241 | 3.25e-23 | 100 |
| MS.gene50483.t1 | MTR_4g081850 | 26.354 | 277 | 170 | 9 | 111 | 374 | 198 | 453 | 8.73e-16 | 79.3 |
| MS.gene50483.t1 | MTR_2g079510 | 25.979 | 281 | 166 | 9 | 111 | 374 | 206 | 461 | 1.57e-15 | 78.6 |
| MS.gene50483.t1 | MTR_7g094900 | 90.323 | 62 | 5 | 1 | 1 | 62 | 1 | 61 | 3.25e-15 | 77.8 |
| MS.gene50483.t1 | MTR_1g048030 | 29.756 | 205 | 122 | 5 | 120 | 304 | 144 | 346 | 1.24e-14 | 75.9 |
| MS.gene50483.t1 | MTR_2g061470 | 27.103 | 214 | 135 | 6 | 92 | 292 | 23 | 228 | 2.13e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50483.t1 | AT4G02790 | 62.500 | 368 | 120 | 5 | 24 | 373 | 4 | 371 | 2.08e-165 | 467 |
| MS.gene50483.t1 | AT2G41670 | 31.718 | 227 | 131 | 5 | 98 | 309 | 26 | 243 | 5.87e-26 | 107 |
| MS.gene50483.t1 | AT3G07050 | 29.897 | 291 | 168 | 9 | 110 | 374 | 128 | 408 | 8.09e-20 | 91.7 |
| MS.gene50483.t1 | AT4G10650 | 28.095 | 210 | 129 | 7 | 99 | 290 | 27 | 232 | 5.55e-14 | 73.2 |
| MS.gene50483.t1 | AT1G52980 | 26.007 | 273 | 158 | 10 | 111 | 364 | 208 | 455 | 1.17e-13 | 72.8 |
Find 97 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCAATGTTGTAGATTAT+TGG | 0.166115 | 7.3:+16172871 | MS.gene50483:intron |
| ATTGGTGGAGATAGAGAATT+TGG | 0.206923 | 7.3:-16172379 | None:intergenic |
| CATCATCATCATCTTGCTTA+TGG | 0.251466 | 7.3:+16172353 | MS.gene50483:CDS |
| ATGAAAGGTGGGTTCGATTT+GGG | 0.264909 | 7.3:+16175921 | MS.gene50483:intron |
| ACTCCTGGCCTTGGAGCTGC+TGG | 0.275454 | 7.3:-16175030 | None:intergenic |
| GGTATTGGACAGTGGTTTCC+TGG | 0.286100 | 7.3:+16173071 | MS.gene50483:intron |
| TATGAAAGGTGGGTTCGATT+TGG | 0.308400 | 7.3:+16175920 | MS.gene50483:intron |
| AATTGTGGAGAAATTGAAAT+TGG | 0.308735 | 7.3:-16172397 | None:intergenic |
| GAGGGACTGGGACCGATCTT+TGG | 0.309126 | 7.3:+16172920 | MS.gene50483:CDS |
| TGGGAAAGATCTTGAGTTGC+TGG | 0.317900 | 7.3:+16175940 | MS.gene50483:CDS |
| ATCTCAATCTCCCACCATTC+AGG | 0.333290 | 7.3:+16172480 | MS.gene50483:CDS |
| CTTGAGTTGCTGGACTCTCC+TGG | 0.351077 | 7.3:+16175950 | MS.gene50483:CDS |
| CTTGCGCTTCATTTGTTCAA+TGG | 0.362304 | 7.3:+16177840 | MS.gene50483:CDS |
| GACTTTAGAAAAGGTAGGTT+TGG | 0.369037 | 7.3:+16177897 | MS.gene50483:CDS |
| TAGGTTTGGTTGGACTTCAT+TGG | 0.373097 | 7.3:+16177911 | MS.gene50483:CDS |
| CTGCTAATTCCTTTGCTAAC+CGG | 0.374309 | 7.3:-16174169 | None:intergenic |
| GTTGATGGATGTTGTTATAG+AGG | 0.386526 | 7.3:+16173136 | MS.gene50483:CDS |
| GTCTTCTCCAATGGGCAGCT+TGG | 0.417848 | 7.3:+16174034 | MS.gene50483:CDS |
| CAAGGAACAACTTAAGTTGA+TGG | 0.420000 | 7.3:+16173121 | MS.gene50483:CDS |
| CTCCAATGGGCAGCTTGGAA+TGG | 0.425085 | 7.3:+16174039 | MS.gene50483:CDS |
| GGAGATTGAGATTGGAGGGT+TGG | 0.441330 | 7.3:-16172469 | None:intergenic |
| TAGGTTCGAGCTGGAATAGT+TGG | 0.444220 | 7.3:+16174949 | MS.gene50483:intron |
| GATGGTTCCGAAGGAGGGAC+TGG | 0.447105 | 7.3:+16172907 | MS.gene50483:CDS |
| CTCTCCAATGTCATCACATA+TGG | 0.452328 | 7.3:-16176020 | None:intergenic |
| CAGCTGATGTAAATGTTAAA+CGG | 0.455115 | 7.3:+16174189 | MS.gene50483:CDS |
| ATCGGTCCCAGTCCCTCCTT+CGG | 0.468176 | 7.3:-16172914 | None:intergenic |
| TGCCCAGCAGCTCCAAGGCC+AGG | 0.470383 | 7.3:+16175027 | MS.gene50483:CDS |
| AACTGCAGATCGAAATGCTT+GGG | 0.470581 | 7.3:+16173979 | MS.gene50483:CDS |
| TTAGAAAAGGTAGGTTTGGT+TGG | 0.470743 | 7.3:+16177901 | MS.gene50483:CDS |
| CTCAAATCTCTTGTAACTCC+TGG | 0.470935 | 7.3:-16175045 | None:intergenic |
| ACATTCTTCTCTTTAACAAA+CGG | 0.471895 | 7.3:-16175005 | None:intergenic |
| TTATTCCCACCCGCAGTAGC+AGG | 0.476643 | 7.3:+16172419 | MS.gene50483:CDS |
| TCATATTGCAAAAGCAGAAA+AGG | 0.487875 | 7.3:+16173094 | MS.gene50483:CDS |
| CAAAGGACTACTTCCTCGTC+CGG | 0.491033 | 7.3:+16174217 | MS.gene50483:CDS |
| ACAAAGGTTGTCTTCTCCAA+TGG | 0.491090 | 7.3:+16174025 | MS.gene50483:CDS |
| CTCCTGGCCTTGGAGCTGCT+GGG | 0.493561 | 7.3:-16175029 | None:intergenic |
| CGGACGAGGAAGTAGTCCTT+TGG | 0.500629 | 7.3:-16174216 | None:intergenic |
| GAATGGTGGGAGATTGAGAT+TGG | 0.500709 | 7.3:-16172477 | None:intergenic |
| AACCATTCCAAGCTGCCCAT+TGG | 0.512603 | 7.3:-16174041 | None:intergenic |
| TTGACACTGATCTTTATCAC+TGG | 0.513007 | 7.3:+16172950 | MS.gene50483:CDS |
| CAAAGGTTGTCTTCTCCAAT+GGG | 0.513498 | 7.3:+16174026 | MS.gene50483:CDS |
| TTGAGTTGCTGGACTCTCCT+GGG | 0.515009 | 7.3:+16175951 | MS.gene50483:CDS |
| CAGGAGTTACAAGAGATTTG+AGG | 0.515630 | 7.3:+16175046 | MS.gene50483:CDS |
| TCTCTTGTAACTCCTGGCCT+TGG | 0.519921 | 7.3:-16175039 | None:intergenic |
| TTGTAGATGGATCTATGGCT+TGG | 0.521384 | 7.3:+16173911 | MS.gene50483:intron |
| AGGTTCGAGCTGGAATAGTT+GGG | 0.525535 | 7.3:+16174950 | MS.gene50483:intron |
| GACTGGTCACTGATTCGCAT+TGG | 0.525801 | 7.3:-16175980 | None:intergenic |
| ATGGTTCCGAAGGAGGGACT+GGG | 0.528733 | 7.3:+16172908 | MS.gene50483:CDS |
| GGAGAACCTGCTACTGCGGG+TGG | 0.532796 | 7.3:-16172425 | None:intergenic |
| TGTGGAGAAATTGAAATTGG+TGG | 0.533927 | 7.3:-16172394 | None:intergenic |
| ATTGGCAACAACACATTCGA+TGG | 0.539468 | 7.3:+16172889 | MS.gene50483:CDS |
| TTGTTATAGAGGTACGAGAC+GGG | 0.546757 | 7.3:+16173147 | MS.gene50483:CDS |
| TGGTGGGAGATTGAGATTGG+AGG | 0.546785 | 7.3:-16172474 | None:intergenic |
| GTCCTGTCAGACTTTAGAAA+AGG | 0.552851 | 7.3:+16177888 | MS.gene50483:CDS |
| TGATGATACATACCTACTGT+TGG | 0.554845 | 7.3:-16176100 | None:intergenic |
| CTGCGGGTGGGAATAAATTG+TGG | 0.555305 | 7.3:-16172412 | None:intergenic |
| AAGTGGAGAACCTGCTACTG+CGG | 0.555716 | 7.3:-16172429 | None:intergenic |
| AATAGTTGGGTACCCTAATG+TGG | 0.558464 | 7.3:+16174963 | MS.gene50483:CDS |
| ACTTACCTGTGGATGACTTG+TGG | 0.559160 | 7.3:-16173183 | None:intergenic |
| ATTCGCATTGGAAGTATCCC+AGG | 0.560318 | 7.3:-16175968 | None:intergenic |
| GGTGGGAGATTGAGATTGGA+GGG | 0.562781 | 7.3:-16172473 | None:intergenic |
| CAACTGCAGATCGAAATGCT+TGG | 0.565332 | 7.3:+16173978 | MS.gene50483:CDS |
| TTCTAAAGTCTGACAGGACA+CGG | 0.568460 | 7.3:-16177884 | None:intergenic |
| CACATACTAAATACCTGCAC+AGG | 0.571976 | 7.3:-16172988 | None:intergenic |
| TAGAAGCAACCTACCGGACG+AGG | 0.573378 | 7.3:-16174230 | None:intergenic |
| AGGGTTGGTGTGGCAGCGAG+AGG | 0.574193 | 7.3:-16172454 | None:intergenic |
| GTCAAGACCAGTCCAAAGAT+CGG | 0.574666 | 7.3:-16172932 | None:intergenic |
| CATTCGATGGTTCCGAAGGA+GGG | 0.577239 | 7.3:+16172902 | MS.gene50483:CDS |
| ACTATTGTATAGGTTCGAGC+TGG | 0.578842 | 7.3:+16174940 | MS.gene50483:intron |
| TTGAGATTGGAGGGTTGGTG+TGG | 0.584151 | 7.3:-16172464 | None:intergenic |
| AGTGGAGAACCTGCTACTGC+GGG | 0.585138 | 7.3:-16172428 | None:intergenic |
| AAAAGCAGAAAAGGAACTCA+AGG | 0.594084 | 7.3:+16173103 | MS.gene50483:CDS |
| GAATGTGCCCAGCAGCTCCA+AGG | 0.594202 | 7.3:+16175022 | MS.gene50483:CDS |
| AGGGCACATTGAAGCTAGGC+CGG | 0.597091 | 7.3:+16174150 | MS.gene50483:intron |
| CTTACAAAACTTCCAACAGT+AGG | 0.597306 | 7.3:+16176088 | MS.gene50483:CDS |
| AATGTTAAACGGAGAGCCAA+AGG | 0.598690 | 7.3:+16174200 | MS.gene50483:CDS |
| GTACAGGGCACATTGAAGCT+AGG | 0.604959 | 7.3:+16174146 | MS.gene50483:intron |
| GTTGTCCACAAGTCATCCAC+AGG | 0.607084 | 7.3:+16173178 | MS.gene50483:CDS |
| ACATTCGATGGTTCCGAAGG+AGG | 0.607094 | 7.3:+16172901 | MS.gene50483:CDS |
| AACACATTCGATGGTTCCGA+AGG | 0.607700 | 7.3:+16172898 | MS.gene50483:CDS |
| GAAGCTAGGCCGGTTAGCAA+AGG | 0.608408 | 7.3:+16174160 | MS.gene50483:CDS |
| ACTGGGACCGATCTTTGGAC+TGG | 0.609653 | 7.3:+16172925 | MS.gene50483:CDS |
| TGTCAGACTTTAGAAAAGGT+AGG | 0.611203 | 7.3:+16177892 | MS.gene50483:CDS |
| TGATCTTTATCACTGGACAA+AGG | 0.621272 | 7.3:+16172957 | MS.gene50483:CDS |
| CTTCATTGGAGAGACCGCCT+AGG | 0.628495 | 7.3:+16177925 | MS.gene50483:CDS |
| CTTGCCATATGTGATGACAT+TGG | 0.632886 | 7.3:+16176016 | MS.gene50483:CDS |
| TTTCGTGTAGACAGTGAATG+TGG | 0.640512 | 7.3:+16176253 | MS.gene50483:CDS |
| ATAGTTGGGTACCCTAATGT+GGG | 0.643817 | 7.3:+16174964 | MS.gene50483:CDS |
| TGTGGCAGCGAGAGGTGAAG+TGG | 0.645729 | 7.3:-16172446 | None:intergenic |
| GAGAACCTGCTACTGCGGGT+GGG | 0.654778 | 7.3:-16172424 | None:intergenic |
| GCAAACATCTGACTTCACCT+AGG | 0.679661 | 7.3:-16177942 | None:intergenic |
| AACATCTGACTTCACCTAGG+CGG | 0.701420 | 7.3:-16177939 | None:intergenic |
| TGGAGAGAGGTCTTATGATG+TGG | 0.703310 | 7.3:+16176036 | MS.gene50483:CDS |
| TTATAGAGGTACGAGACGGG+CGG | 0.703873 | 7.3:+16173150 | MS.gene50483:CDS |
| TATGTGATGACATTGGAGAG+AGG | 0.708423 | 7.3:+16176023 | MS.gene50483:CDS |
| TGTGGATGACTTGTGGACAA+CGG | 0.717355 | 7.3:-16173176 | None:intergenic |
| GTTGTTATAGAGGTACGAGA+CGG | 0.721407 | 7.3:+16173146 | MS.gene50483:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr7.3:16176320-16176339 | MS.gene50483:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr7.3:16176339-16176320 | None:intergenic | 0.0% |
| !! | TATATATATAAAATAAAATT+AGG | - | chr7.3:16176309-16176328 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr7.3:16176319-16176338 | MS.gene50483:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr7.3:16176338-16176319 | None:intergenic | 0.0% |
| !! | AAAAAAAAAATAATCACAAT+TGG | - | chr7.3:16174267-16174286 | None:intergenic | 10.0% |
| !! | AATAAATAAAATACTAAAGA+TGG | - | chr7.3:16175543-16175562 | None:intergenic | 10.0% |
| !! | GTGAAAAAATAATAATATTA+CGG | - | chr7.3:16172795-16172814 | None:intergenic | 10.0% |
| !! | TATATAAAATAAAATTAGGA+AGG | - | chr7.3:16176305-16176324 | None:intergenic | 10.0% |
| !!! | ATATTTTTTAAACATTGAAT+TGG | - | chr7.3:16173798-16173817 | None:intergenic | 10.0% |
| !!! | ATTTCTTATTTACAAAATAA+AGG | + | chr7.3:16174601-16174620 | MS.gene50483:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+AGG | - | chr7.3:16175242-16175261 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr7.3:16175242-16175261 | None:intergenic | 100.0% |
| !! | AAAACATCAAAAAATTTGAA+TGG | + | chr7.3:16175298-16175317 | MS.gene50483:intron | 15.0% |
| !! | ATCTTGAAAAATCATTATAA+TGG | + | chr7.3:16176851-16176870 | MS.gene50483:intron | 15.0% |
| !! | TTGCAATTAATCAATTTATT+TGG | + | chr7.3:16175484-16175503 | MS.gene50483:intron | 15.0% |
| !!! | AAAATTTAAAGCTTTGTTAA+AGG | + | chr7.3:16177157-16177176 | MS.gene50483:intron | 15.0% |
| !!! | AAATTTAAAGCTTTGTTAAA+GGG | + | chr7.3:16177158-16177177 | MS.gene50483:intron | 15.0% |
| !!! | AAGAAATAACTTATTTTTGT+AGG | + | chr7.3:16174372-16174391 | MS.gene50483:intron | 15.0% |
| !!! | AATGATTTGTAAACAATTAA+AGG | - | chr7.3:16174852-16174871 | None:intergenic | 15.0% |
| !!! | AGAAATAACTTATTTTTGTA+GGG | + | chr7.3:16174373-16174392 | MS.gene50483:intron | 15.0% |
| !!! | GCTAGTATTTTTTTTATAAT+TGG | - | chr7.3:16175621-16175640 | None:intergenic | 15.0% |
| !!! | TCTTATTTCATTAATATGAA+AGG | + | chr7.3:16175906-16175925 | MS.gene50483:intron | 15.0% |
| !!! | TTTTGAAAATTTAGTTTCTA+AGG | + | chr7.3:16175703-16175722 | MS.gene50483:intron | 15.0% |
| !! | AAATAATAATATTACGGTGA+CGG | - | chr7.3:16172789-16172808 | None:intergenic | 20.0% |
| !! | AACATCAATCTATCAATTAT+AGG | + | chr7.3:16177030-16177049 | MS.gene50483:intron | 20.0% |
| !! | AACATTAACAAAATAACAGT+TGG | - | chr7.3:16174743-16174762 | None:intergenic | 20.0% |
| !! | AATTAGAAATGTTATGTTTC+CGG | - | chr7.3:16175103-16175122 | None:intergenic | 20.0% |
| !! | ACATCAATCTATCAATTATA+GGG | + | chr7.3:16177031-16177050 | MS.gene50483:intron | 20.0% |
| !! | ACATTCATAAAACAATGTTA+AGG | - | chr7.3:16174513-16174532 | None:intergenic | 20.0% |
| !! | ATCTAGATTTGAAGAAATAA+GGG | - | chr7.3:16176894-16176913 | None:intergenic | 20.0% |
| !! | ATGATAAACAATTGTTGAAT+AGG | - | chr7.3:16173584-16173603 | None:intergenic | 20.0% |
| !! | ATTCAAAATCTAATATTAGC+TGG | - | chr7.3:16174679-16174698 | None:intergenic | 20.0% |
| !! | ATTTCATGATACTATTGTAT+AGG | + | chr7.3:16174930-16174949 | MS.gene50483:intron | 20.0% |
| !! | ATTTCATTAATATGAAAGGT+GGG | + | chr7.3:16175910-16175929 | MS.gene50483:intron | 20.0% |
| !! | CAAAAAACAGAACTTAAATT+AGG | - | chr7.3:16172723-16172742 | None:intergenic | 20.0% |
| !! | CAACTTAATGAAAAATTAAG+AGG | - | chr7.3:16173879-16173898 | None:intergenic | 20.0% |
| !! | CTAAAAAATACTAAGAGATT+TGG | + | chr7.3:16177092-16177111 | MS.gene50483:intron | 20.0% |
| !! | TAACATTGCTAATAATCTAA+CGG | - | chr7.3:16172834-16172853 | None:intergenic | 20.0% |
| !! | TAACTAAAATATGATTCCAA+GGG | - | chr7.3:16176136-16176155 | None:intergenic | 20.0% |
| !! | TACTTATGAAACAAATATTG+TGG | - | chr7.3:16173763-16173782 | None:intergenic | 20.0% |
| !! | TATTATCATAAAATTAGCAC+AGG | - | chr7.3:16174302-16174321 | None:intergenic | 20.0% |
| !! | TATTTCATTAATATGAAAGG+TGG | + | chr7.3:16175909-16175928 | MS.gene50483:intron | 20.0% |
| !! | TTAACTAAAATATGATTCCA+AGG | - | chr7.3:16176137-16176156 | None:intergenic | 20.0% |
| !! | TTCAAAATCTAATATTAGCT+GGG | - | chr7.3:16174678-16174697 | None:intergenic | 20.0% |
| !! | TTTATTTCCTTAAATATCTC+CGG | + | chr7.3:16175081-16175100 | MS.gene50483:intron | 20.0% |
| !!! | AACACATGAAATTCAATTTT+GGG | - | chr7.3:16172509-16172528 | None:intergenic | 20.0% |
| !!! | ATAATCTCATTCTATTCTTT+TGG | + | chr7.3:16176947-16176966 | MS.gene50483:intron | 20.0% |
| !!! | ATGTTCATTATTTTGTACTA+TGG | + | chr7.3:16174758-16174777 | MS.gene50483:intron | 20.0% |
| !!! | CAAATCTCTTAGTATTTTTT+AGG | - | chr7.3:16177094-16177113 | None:intergenic | 20.0% |
| !!! | CATGTTTAAAACAAAAAACA+GGG | - | chr7.3:16175198-16175217 | None:intergenic | 20.0% |
| !!! | CTAATTTAAGTTCTGTTTTT+TGG | + | chr7.3:16172721-16172740 | MS.gene50483:intron | 20.0% |
| !!! | TGGTAATAAAAAGAGAATTT+TGG | + | chr7.3:16173931-16173950 | MS.gene50483:CDS | 20.0% |
| !!! | TGTGCTAATTTTATGATAAT+AGG | + | chr7.3:16174301-16174320 | MS.gene50483:intron | 20.0% |
| ! | AAAACAAAATAAACCAGCAT+TGG | - | chr7.3:16175423-16175442 | None:intergenic | 25.0% |
| ! | AAAGTGAAAATCACACATTA+AGG | + | chr7.3:16176509-16176528 | MS.gene50483:intron | 25.0% |
| ! | AAGACAATAAATCATGTACT+CGG | - | chr7.3:16175890-16175909 | None:intergenic | 25.0% |
| ! | AATTGTGGAGAAATTGAAAT+TGG | - | chr7.3:16172400-16172419 | None:intergenic | 25.0% |
| ! | ACATTCTTCTCTTTAACAAA+CGG | - | chr7.3:16175008-16175027 | None:intergenic | 25.0% |
| ! | ATAAAAGACACCTTCATAAA+AGG | + | chr7.3:16177614-16177633 | MS.gene50483:intron | 25.0% |
| ! | ATAGATAGATTAAGAGACAT+TGG | - | chr7.3:16177761-16177780 | None:intergenic | 25.0% |
| ! | ATCTGGCAAAAAATAATGAT+GGG | + | chr7.3:16176912-16176931 | MS.gene50483:intron | 25.0% |
| ! | GATCTAGATTTGAAGAAATA+AGG | - | chr7.3:16176895-16176914 | None:intergenic | 25.0% |
| ! | TAAATCACAATGAAATTTGC+AGG | - | chr7.3:16177058-16177077 | None:intergenic | 25.0% |
| ! | TAAGGAAACATATCGTTTAT+TGG | + | chr7.3:16174346-16174365 | MS.gene50483:intron | 25.0% |
| ! | TATTTCTTCAAATCTAGATC+TGG | + | chr7.3:16176895-16176914 | MS.gene50483:intron | 25.0% |
| ! | TCTAGATTTGAAGAAATAAG+GGG | - | chr7.3:16176893-16176912 | None:intergenic | 25.0% |
| ! | TGAAAAATGTATAATCGACT+TGG | + | chr7.3:16175580-16175599 | MS.gene50483:intron | 25.0% |
| ! | TTATAGATAGCTTATGAAGA+TGG | - | chr7.3:16173652-16173671 | None:intergenic | 25.0% |
| ! | TTCTCTATGAATCTACAATT+AGG | - | chr7.3:16177819-16177838 | None:intergenic | 25.0% |
| !! | AAACAGGAAATGAACATTTT+TGG | - | chr7.3:16173214-16173233 | None:intergenic | 25.0% |
| !! | AACTTTGTTTGCTTAATTCT+GGG | + | chr7.3:16176982-16177001 | MS.gene50483:intron | 25.0% |
| !! | ATAGAAGAAACCTTTTATGA+AGG | - | chr7.3:16177627-16177646 | None:intergenic | 25.0% |
| !! | CATAGAATAAAGGTATAAAC+AGG | - | chr7.3:16173230-16173249 | None:intergenic | 25.0% |
| !! | CTTTTCTATATCCAAGAATA+AGG | + | chr7.3:16174328-16174347 | MS.gene50483:intron | 25.0% |
| !! | GAAAAATGTATAATCGACTT+GGG | + | chr7.3:16175581-16175600 | MS.gene50483:intron | 25.0% |
| !! | GAACACATGAAATTCAATTT+TGG | - | chr7.3:16172510-16172529 | None:intergenic | 25.0% |
| !! | GCATGTTTAAAACAAAAAAC+AGG | - | chr7.3:16175199-16175218 | None:intergenic | 25.0% |
| !! | TAACTATGATAAACTTTTGC+AGG | - | chr7.3:16175805-16175824 | None:intergenic | 25.0% |
| !! | TAACTTTGTTTGCTTAATTC+TGG | + | chr7.3:16176981-16177000 | MS.gene50483:intron | 25.0% |
| !! | TCTATTCTTTTGGATTTTGT+AGG | + | chr7.3:16176957-16176976 | MS.gene50483:intron | 25.0% |
| !!! | AAAATAATGATGGGTTTTGT+AGG | + | chr7.3:16176921-16176940 | MS.gene50483:intron | 25.0% |
| !!! | CAACTCAATTTTGACTTAAA+AGG | + | chr7.3:16174411-16174430 | MS.gene50483:intron | 25.0% |
| !!! | CTGGTTTATTTTGTTTTAAG+AGG | + | chr7.3:16175426-16175445 | MS.gene50483:intron | 25.0% |
| AAAATGTACCAATCAGGTAA+CGG | - | chr7.3:16173525-16173544 | None:intergenic | 30.0% | |
| AAAGTGAAAATCACACCTTA+AGG | - | chr7.3:16177517-16177536 | None:intergenic | 30.0% | |
| AACCATTCGATCAAAATGTA+TGG | - | chr7.3:16177319-16177338 | None:intergenic | 30.0% | |
| ACACCTTCATAAAAGTAAGT+TGG | - | chr7.3:16176467-16176486 | None:intergenic | 30.0% | |
| ACGATATGTTTCCTTATTCT+TGG | - | chr7.3:16174342-16174361 | None:intergenic | 30.0% | |
| AGGTGTTCATGATAACATTA+TGG | - | chr7.3:16175222-16175241 | None:intergenic | 30.0% | |
| ATAAAAGACACCTTCACAAA+AGG | - | chr7.3:16176412-16176431 | None:intergenic | 30.0% | |
| ATAAAATTAGCACAGGAAAG+CGG | - | chr7.3:16174295-16174314 | None:intergenic | 30.0% | |
| CACTCAATGTTGTAGATTAT+TGG | + | chr7.3:16172871-16172890 | MS.gene50483:intron | 30.0% | |
| CAGCTGATGTAAATGTTAAA+CGG | + | chr7.3:16174189-16174208 | MS.gene50483:CDS | 30.0% | |
| GATCTGGCAAAAAATAATGA+TGG | + | chr7.3:16176911-16176930 | MS.gene50483:intron | 30.0% | |
| GATGATAAAATGTACCAATC+AGG | - | chr7.3:16173531-16173550 | None:intergenic | 30.0% | |
| GGTGTTCATGATAACATTAT+GGG | - | chr7.3:16175221-16175240 | None:intergenic | 30.0% | |
| GTAAATAAGAAATGCAAGAC+AGG | - | chr7.3:16174594-16174613 | None:intergenic | 30.0% | |
| TAGGAAGGAAAAAAAATCAC+TGG | - | chr7.3:16176290-16176309 | None:intergenic | 30.0% | |
| TATGTTTCCGGAGATATTTA+AGG | - | chr7.3:16175091-16175110 | None:intergenic | 30.0% | |
| TCAACAGAGGAAGAATTTAA+CGG | + | chr7.3:16175738-16175757 | MS.gene50483:intron | 30.0% | |
| TCATATTGCAAAAGCAGAAA+AGG | + | chr7.3:16173094-16173113 | MS.gene50483:CDS | 30.0% | |
| TGATTAATTGCAACTTACGT+TGG | - | chr7.3:16175477-16175496 | None:intergenic | 30.0% | |
| TGCTTCTTAATACAGTAGTT+AGG | + | chr7.3:16173833-16173852 | MS.gene50483:intron | 30.0% | |
| TTCGAAAAAACTTACGAAAG+TGG | - | chr7.3:16173676-16173695 | None:intergenic | 30.0% | |
| TTCTATTTGGTCTGAATTGT+GGG | - | chr7.3:16172586-16172605 | None:intergenic | 30.0% | |
| TTTGAACAAACCGCTATTAT+CGG | - | chr7.3:16173278-16173297 | None:intergenic | 30.0% | |
| ! | AACACGTTACTTTCTAAATG+GGG | + | chr7.3:16177279-16177298 | MS.gene50483:intron | 30.0% |
| ! | ACATCATGGAGTCTTTTTAT+TGG | + | chr7.3:16172650-16172669 | MS.gene50483:intron | 30.0% |
| ! | ACCCTAGAAGTTACATTTTT+CGG | - | chr7.3:16175375-16175394 | None:intergenic | 30.0% |
| ! | AGAACACGTTACTTTCTAAA+TGG | + | chr7.3:16177277-16177296 | MS.gene50483:intron | 30.0% |
| ! | AGTTTTTGAACATTGAGATC+AGG | - | chr7.3:16176176-16176195 | None:intergenic | 30.0% |
| ! | ATTGGTACATTTTATCATCC+AGG | + | chr7.3:16173532-16173551 | MS.gene50483:intron | 30.0% |
| ! | GAACACGTTACTTTCTAAAT+GGG | + | chr7.3:16177278-16177297 | MS.gene50483:intron | 30.0% |
| ! | GTTTTATGTATTCTCAACAG+AGG | + | chr7.3:16175725-16175744 | MS.gene50483:intron | 30.0% |
| ! | TAATTCCCTATCATTGCTTT+TGG | + | chr7.3:16173497-16173516 | MS.gene50483:intron | 30.0% |
| ! | TATTGATTATCACAGCTTGA+TGG | - | chr7.3:16176823-16176842 | None:intergenic | 30.0% |
| ! | TCTAATAACTAAGCTTTTGC+CGG | - | chr7.3:16173701-16173720 | None:intergenic | 30.0% |
| ! | TTGGTACATTTTATCATCCA+GGG | + | chr7.3:16173533-16173552 | MS.gene50483:intron | 30.0% |
| ! | TTTTATCAAGTCACACCTTA+AGG | + | chr7.3:16177499-16177518 | MS.gene50483:intron | 30.0% |
| !! | AAAGACACCAACTTACTTTT+AGG | - | chr7.3:16176476-16176457 | None:intergenic | 30.0% |
| !! | AAGTTACATTTTTCGGCTTA+GGG | - | chr7.3:16175368-16175387 | None:intergenic | 30.0% |
| !! | ACACCAACTTACTTTTATGA+AGG | + | chr7.3:16176461-16176480 | MS.gene50483:intron | 30.0% |
| !! | AGATTTTTCAAACACTCCAT+CGG | + | chr7.3:16173723-16173742 | MS.gene50483:intron | 30.0% |
| !! | CACAAAGTATTGTCAAATAG+TGG | - | chr7.3:16173331-16173350 | None:intergenic | 30.0% |
| !! | TTTAAAGCTTTGTTAAAGGG+AGG | + | chr7.3:16177161-16177180 | MS.gene50483:intron | 30.0% |
| !!! | GGCTTAGGGATTTTATTTTT+CGG | - | chr7.3:16175354-16175373 | None:intergenic | 30.0% |
| AAAAGCAGAAAAGGAACTCA+AGG | + | chr7.3:16173103-16173122 | MS.gene50483:CDS | 35.0% | |
| AAAGACTCCATGATGTTCAA+TGG | - | chr7.3:16172646-16172665 | None:intergenic | 35.0% | |
| AACAAGGGATCTTGAAAACA+CGG | - | chr7.3:16174101-16174120 | None:intergenic | 35.0% | |
| AACGTCGGTACATAGAATAA+AGG | - | chr7.3:16173240-16173259 | None:intergenic | 35.0% | |
| ACACCTTCCTAAAAGTAAGT+TGG | + | chr7.3:16177559-16177578 | MS.gene50483:intron | 35.0% | |
| AGCCATTAGATCAAAGTGTA+CGG | + | chr7.3:16176660-16176679 | MS.gene50483:intron | 35.0% | |
| AGCCGAAAAATGTAACTTCT+AGG | + | chr7.3:16175370-16175389 | MS.gene50483:intron | 35.0% | |
| AGCTTGATGGAAGAAATTGT+AGG | - | chr7.3:16176810-16176829 | None:intergenic | 35.0% | |
| AGGATCAGATATGTTGAACA+AGG | - | chr7.3:16174117-16174136 | None:intergenic | 35.0% | |
| ATAGATCCATCTACAAAAGC+AGG | - | chr7.3:16173907-16173926 | None:intergenic | 35.0% | |
| ATTGGTGGAGATAGAGAATT+TGG | - | chr7.3:16172382-16172401 | None:intergenic | 35.0% | |
| ATTTCAAATGAGAGGATGAG+AGG | - | chr7.3:16177352-16177371 | None:intergenic | 35.0% | |
| CACGAATTACACAAGAATGA+AGG | - | chr7.3:16172532-16172551 | None:intergenic | 35.0% | |
| CATCATCATCATCTTGCTTA+TGG | + | chr7.3:16172353-16172372 | MS.gene50483:CDS | 35.0% | |
| CATTTCCTGGAATGTTAACT+TGG | - | chr7.3:16175510-16175529 | None:intergenic | 35.0% | |
| CATTTCCTTATTCCTAGAGA+TGG | - | chr7.3:16174446-16174465 | None:intergenic | 35.0% | |
| CTTACAAAACTTCCAACAGT+AGG | + | chr7.3:16176088-16176107 | MS.gene50483:CDS | 35.0% | |
| CTTACATCCATTGAACATCA+TGG | + | chr7.3:16172636-16172655 | MS.gene50483:intron | 35.0% | |
| CTTCTATTTGGTCTGAATTG+TGG | - | chr7.3:16172587-16172606 | None:intergenic | 35.0% | |
| GATCCTATGCTTTATGTACA+GGG | + | chr7.3:16174131-16174150 | MS.gene50483:intron | 35.0% | |
| GCCGAAAAATGTAACTTCTA+GGG | + | chr7.3:16175371-16175390 | MS.gene50483:intron | 35.0% | |
| GCTTCCCTATCCAAATAAAA+CGG | + | chr7.3:16175670-16175689 | MS.gene50483:intron | 35.0% | |
| GCTTGATGGAAGAAATTGTA+GGG | - | chr7.3:16176809-16176828 | None:intergenic | 35.0% | |
| GGATCAGATATGTTGAACAA+GGG | - | chr7.3:16174116-16174135 | None:intergenic | 35.0% | |
| GTCAAATAGTGGCTATAGTA+GGG | - | chr7.3:16173320-16173339 | None:intergenic | 35.0% | |
| TACCGTACACTTTGATCTAA+TGG | - | chr7.3:16176665-16176684 | None:intergenic | 35.0% | |
| TAGAGGACATTTCAAATGAG+AGG | - | chr7.3:16177360-16177379 | None:intergenic | 35.0% | |
| TGATAAAAGACACCACCAAA+GGG | + | chr7.3:16176539-16176558 | MS.gene50483:intron | 35.0% | |
| TGATAAAAGACACCACCAAA+GGG | - | chr7.3:16176558-16176539 | None:intergenic | 35.0% | |
| TGATCCTATGCTTTATGTAC+AGG | + | chr7.3:16174130-16174149 | MS.gene50483:intron | 35.0% | |
| TGATCTTTATCACTGGACAA+AGG | + | chr7.3:16172957-16172976 | MS.gene50483:CDS | 35.0% | |
| TGATGATACATACCTACTGT+TGG | - | chr7.3:16176103-16176122 | None:intergenic | 35.0% | |
| TGGAAAACAACAACATTTCC+TGG | - | chr7.3:16175523-16175542 | None:intergenic | 35.0% | |
| TGTCAAATAGTGGCTATAGT+AGG | - | chr7.3:16173321-16173340 | None:intergenic | 35.0% | |
| TGTGCACTTTATGTGTGTAA+TGG | + | chr7.3:16173007-16173026 | MS.gene50483:intron | 35.0% | |
| TGTGGAGAAATTGAAATTGG+TGG | - | chr7.3:16172397-16172416 | None:intergenic | 35.0% | |
| TTGACACTGATCTTTATCAC+TGG | + | chr7.3:16172950-16172969 | MS.gene50483:CDS | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | + | chr7.3:16176538-16176557 | MS.gene50483:intron | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | - | chr7.3:16176557-16176538 | None:intergenic | 35.0% | |
| TTGTACTATGGAAGTAGATG+TGG | + | chr7.3:16174770-16174789 | MS.gene50483:intron | 35.0% | |
| TTGTGCTAAATTGCGTATTG+TGG | + | chr7.3:16173346-16173365 | MS.gene50483:intron | 35.0% | |
| ! | ACACGTTACTTTCTAAATGG+GGG | + | chr7.3:16177280-16177299 | MS.gene50483:intron | 35.0% |
| ! | AGAGATGATTTTCCCACATT+AGG | - | chr7.3:16174979-16174998 | None:intergenic | 35.0% |
| ! | AGGTATTGTCGTAGTACAAA+AGG | - | chr7.3:16173859-16173878 | None:intergenic | 35.0% |
| ! | ATAGAAGACACCTTTTGTGA+AGG | + | chr7.3:16176399-16176418 | MS.gene50483:intron | 35.0% |
| ! | ATGAAGAGGCATAGAAAGAA+AGG | + | chr7.3:16177254-16177273 | MS.gene50483:intron | 35.0% |
| ! | GACTTTAGAAAAGGTAGGTT+TGG | + | chr7.3:16177897-16177916 | MS.gene50483:CDS | 35.0% |
| ! | GAGATGATTTTCCCACATTA+GGG | - | chr7.3:16174978-16174997 | None:intergenic | 35.0% |
| ! | GATGATGTATCGATGGAATT+TGG | + | chr7.3:16177183-16177202 | MS.gene50483:intron | 35.0% |
| ! | GTTGATGGATGTTGTTATAG+AGG | + | chr7.3:16173136-16173155 | MS.gene50483:CDS | 35.0% |
| ! | GTTTTTCTTGATCTCAACAG+AGG | + | chr7.3:16175393-16175412 | MS.gene50483:intron | 35.0% |
| ! | TGCTTTTGTAGATGGATCTA+TGG | + | chr7.3:16173906-16173925 | MS.gene50483:intron | 35.0% |
| ! | TGGTACATTTTATCATCCAG+GGG | + | chr7.3:16173534-16173553 | MS.gene50483:intron | 35.0% |
| ! | TGTATCGATGGAATTTGGAA+TGG | + | chr7.3:16177188-16177207 | MS.gene50483:intron | 35.0% |
| ! | TGTCAGACTTTAGAAAAGGT+AGG | + | chr7.3:16177892-16177911 | MS.gene50483:CDS | 35.0% |
| ! | TTAGAAAAGGTAGGTTTGGT+TGG | + | chr7.3:16177901-16177920 | MS.gene50483:CDS | 35.0% |
| ! | TTATTTGGATAGGGAAGCAT+AGG | - | chr7.3:16175668-16175687 | None:intergenic | 35.0% |
| ! | TTTTACTAGGCATGGAACAA+AGG | + | chr7.3:16174009-16174028 | MS.gene50483:CDS | 35.0% |
| !! | ACACCAACTTACTTTTAGGA+AGG | - | chr7.3:16177565-16177584 | None:intergenic | 35.0% |
| !! | AGCCATACATTTTGATCGAA+TGG | + | chr7.3:16177314-16177333 | MS.gene50483:intron | 35.0% |
| !! | CAAGGAACAACTTAAGTTGA+TGG | + | chr7.3:16173121-16173140 | MS.gene50483:CDS | 35.0% |
| !! | CTTTTCCATCTCTAGGAATA+AGG | + | chr7.3:16174438-16174457 | MS.gene50483:intron | 35.0% |
| !! | GAAGTTACATTTTTCGGCTT+AGG | - | chr7.3:16175369-16175388 | None:intergenic | 35.0% |
| !!! | GGGATTTTATTTTTCGGCTT+AGG | - | chr7.3:16175348-16175367 | None:intergenic | 35.0% |
| !!! | TACCTTTTCTAAAGTCTGAC+AGG | - | chr7.3:16177893-16177912 | None:intergenic | 35.0% |
| !!! | TCAATTTTGGGTTACCTGAA+TGG | - | chr7.3:16172497-16172516 | None:intergenic | 35.0% |
| !!! | TCGTAAGTTTTTTCGAACAC+CGG | + | chr7.3:16173679-16173698 | MS.gene50483:intron | 35.0% |
| !!! | TTTTGGTGTTAACTTACCTG+TGG | - | chr7.3:16173197-16173216 | None:intergenic | 35.0% |
| AAAATCTGGTGCAAGTGCAA+TGG | - | chr7.3:16176708-16176727 | None:intergenic | 40.0% | |
| AAACAATGTTAAGGAGCTGC+AGG | - | chr7.3:16174504-16174523 | None:intergenic | 40.0% | |
| AACTGCAGATCGAAATGCTT+GGG | + | chr7.3:16173979-16173998 | MS.gene50483:CDS | 40.0% | |
| AATAGTTGGGTACCCTAATG+TGG | + | chr7.3:16174963-16174982 | MS.gene50483:CDS | 40.0% | |
| AATGTTAAACGGAGAGCCAA+AGG | + | chr7.3:16174200-16174219 | MS.gene50483:CDS | 40.0% | |
| AATTGCTAGAAGCAACCTAC+CGG | - | chr7.3:16174239-16174258 | None:intergenic | 40.0% | |
| ACAAAGGTTGTCTTCTCCAA+TGG | + | chr7.3:16174025-16174044 | MS.gene50483:CDS | 40.0% | |
| ACGGAACCAAAAGCAATGAT+AGG | - | chr7.3:16173506-16173525 | None:intergenic | 40.0% | |
| ACTATTGTATAGGTTCGAGC+TGG | + | chr7.3:16174940-16174959 | MS.gene50483:intron | 40.0% | |
| AGAGGAGTGGTTATTATGAG+AGG | + | chr7.3:16176619-16176638 | MS.gene50483:intron | 40.0% | |
| ATAGTTGGGTACCCTAATGT+GGG | + | chr7.3:16174964-16174983 | MS.gene50483:CDS | 40.0% | |
| ATTGGCAACAACACATTCGA+TGG | + | chr7.3:16172889-16172908 | MS.gene50483:CDS | 40.0% | |
| CAAAGGTTGTCTTCTCCAAT+GGG | + | chr7.3:16174026-16174045 | MS.gene50483:CDS | 40.0% | |
| CAATCCACTAAAGACAACGT+CGG | - | chr7.3:16173255-16173274 | None:intergenic | 40.0% | |
| CACATACTAAATACCTGCAC+AGG | - | chr7.3:16172991-16173010 | None:intergenic | 40.0% | |
| CAGGAGTTACAAGAGATTTG+AGG | + | chr7.3:16175046-16175065 | MS.gene50483:CDS | 40.0% | |
| CGGAACCAAAAGCAATGATA+GGG | - | chr7.3:16173505-16173524 | None:intergenic | 40.0% | |
| CTCAAATCTCTTGTAACTCC+TGG | - | chr7.3:16175048-16175067 | None:intergenic | 40.0% | |
| CTCTCCAATGTCATCACATA+TGG | - | chr7.3:16176023-16176042 | None:intergenic | 40.0% | |
| CTGACAGTGCATCTTCTATT+TGG | - | chr7.3:16172599-16172618 | None:intergenic | 40.0% | |
| CTGCTAATTCCTTTGCTAAC+CGG | - | chr7.3:16174172-16174191 | None:intergenic | 40.0% | |
| CTGTGAAATAGCAGCATTTG+TGG | - | chr7.3:16173419-16173438 | None:intergenic | 40.0% | |
| CTTGCCATATGTGATGACAT+TGG | + | chr7.3:16176016-16176035 | MS.gene50483:CDS | 40.0% | |
| CTTGCGCTTCATTTGTTCAA+TGG | + | chr7.3:16177840-16177859 | MS.gene50483:CDS | 40.0% | |
| GAGGAGTGGTTATTATGAGA+GGG | + | chr7.3:16176620-16176639 | MS.gene50483:intron | 40.0% | |
| GGAAAATGACATAACACCGA+TGG | - | chr7.3:16173742-16173761 | None:intergenic | 40.0% | |
| GGAGGAGAAAAGATCTTGTT+TGG | - | chr7.3:16174072-16174091 | None:intergenic | 40.0% | |
| GGCACATGGGAAATAAAATC+TGG | - | chr7.3:16176722-16176741 | None:intergenic | 40.0% | |
| TATGTGATGACATTGGAGAG+AGG | + | chr7.3:16176023-16176042 | MS.gene50483:CDS | 40.0% | |
| TCCCTATCCAAATAAAACGG+TGG | + | chr7.3:16175673-16175692 | MS.gene50483:intron | 40.0% | |
| TGAGCTCAAGCAAGAAACAA+TGG | + | chr7.3:16175846-16175865 | MS.gene50483:intron | 40.0% | |
| TTATCATCCAGGGGATGTTT+GGG | + | chr7.3:16173543-16173562 | MS.gene50483:intron | 40.0% | |
| TTATGTTACAAGCCACCCTT+TGG | + | chr7.3:16177469-16177488 | MS.gene50483:intron | 40.0% | |
| TTGGTCTGAATTGTGGGTTT+GGG | - | chr7.3:16172580-16172599 | None:intergenic | 40.0% | |
| TTGTAGATGGATCTATGGCT+TGG | + | chr7.3:16173911-16173930 | MS.gene50483:intron | 40.0% | |
| TTTATCATCCAGGGGATGTT+TGG | + | chr7.3:16173542-16173561 | MS.gene50483:intron | 40.0% | |
| TTTCGTGTAGACAGTGAATG+TGG | + | chr7.3:16176253-16176272 | MS.gene50483:CDS | 40.0% | |
| TTTGGCCAAGTTAACATTCC+AGG | + | chr7.3:16175502-16175521 | MS.gene50483:intron | 40.0% | |
| TTTGGTCTGAATTGTGGGTT+TGG | - | chr7.3:16172581-16172600 | None:intergenic | 40.0% | |
| ! | AATGGACTTCCAAGTCCTAA+TGG | + | chr7.3:16175316-16175335 | MS.gene50483:intron | 40.0% |
| ! | ATGAAAGGTGGGTTCGATTT+GGG | + | chr7.3:16175921-16175940 | MS.gene50483:intron | 40.0% |
| ! | ATGGAATTTGGAATGGTAGG+AGG | + | chr7.3:16177195-16177214 | MS.gene50483:intron | 40.0% |
| ! | CACGTTACTTTCTAAATGGG+GGG | + | chr7.3:16177281-16177300 | MS.gene50483:intron | 40.0% |
| ! | CTAGCTGTTCATCAGCTTTT+CGG | + | chr7.3:16175636-16175655 | MS.gene50483:intron | 40.0% |
| ! | GTCCTGTCAGACTTTAGAAA+AGG | + | chr7.3:16177888-16177907 | MS.gene50483:CDS | 40.0% |
| ! | GTTGTTATAGAGGTACGAGA+CGG | + | chr7.3:16173146-16173165 | MS.gene50483:CDS | 40.0% |
| ! | TAGGTTTGGTTGGACTTCAT+TGG | + | chr7.3:16177911-16177930 | MS.gene50483:CDS | 40.0% |
| ! | TATGAAAGGTGGGTTCGATT+TGG | + | chr7.3:16175920-16175939 | MS.gene50483:intron | 40.0% |
| ! | TCGATGGAATTTGGAATGGT+AGG | + | chr7.3:16177192-16177211 | MS.gene50483:intron | 40.0% |
| ! | TGCTGATTACTCCTTGGTAT+TGG | + | chr7.3:16173056-16173075 | MS.gene50483:intron | 40.0% |
| ! | TTGTTATAGAGGTACGAGAC+GGG | + | chr7.3:16173147-16173166 | MS.gene50483:CDS | 40.0% |
| ! | TTTTGTTACAAGCCACCCTT+TGG | - | chr7.3:16176557-16176576 | None:intergenic | 40.0% |
| !! | AGGACTACTTTTCCATCTCT+AGG | + | chr7.3:16174431-16174450 | MS.gene50483:intron | 40.0% |
| !! | CAAGTTTTATAGCTGCTGAC+TGG | - | chr7.3:16176000-16176019 | None:intergenic | 40.0% |
| !! | CTTGGGCAGAGTATTTTACT+AGG | + | chr7.3:16173996-16174015 | MS.gene50483:CDS | 40.0% |
| !! | GAACTTGCCACCGTTTTATT+TGG | - | chr7.3:16175683-16175702 | None:intergenic | 40.0% |
| !! | GCAGAGTATTTTACTAGGCA+TGG | + | chr7.3:16174001-16174020 | MS.gene50483:CDS | 40.0% |
| !! | GTTACTCCTGCTTTTGTAGA+TGG | + | chr7.3:16173898-16173917 | MS.gene50483:intron | 40.0% |
| !! | TAGTGGATTGCCGATAATAG+CGG | + | chr7.3:16173265-16173284 | MS.gene50483:intron | 40.0% |
| !! | TCTGCTTTTGCAATATGACC+AGG | - | chr7.3:16173092-16173111 | None:intergenic | 40.0% |
| !! | TTCTAAAGTCTGACAGGACA+CGG | - | chr7.3:16177887-16177906 | None:intergenic | 40.0% |
| !! | TTTGAGTGCTGATTACTCCT+TGG | + | chr7.3:16173050-16173069 | MS.gene50483:intron | 40.0% |
| !!! | ATTTTGGGTTACCTGAATGG+TGG | - | chr7.3:16172494-16172513 | None:intergenic | 40.0% |
| !!! | GCCACCGTTTTATTTGGATA+GGG | - | chr7.3:16175677-16175696 | None:intergenic | 40.0% |
| !!! | TGCCACCGTTTTATTTGGAT+AGG | - | chr7.3:16175678-16175697 | None:intergenic | 40.0% |
| !!! | TTTTGGGTTACCTGAATGGT+GGG | - | chr7.3:16172493-16172512 | None:intergenic | 40.0% |
| !!! | TTTTGGTTCCGTTACCTGAT+TGG | + | chr7.3:16173514-16173533 | MS.gene50483:intron | 40.0% |
| AAAGAGATGGAAGAGAGCAG+TGG | + | chr7.3:16177218-16177237 | MS.gene50483:intron | 45.0% | |
| AACACATTCGATGGTTCCGA+AGG | + | chr7.3:16172898-16172917 | MS.gene50483:CDS | 45.0% | |
| AAGGGAGGATGATGTATCGA+TGG | + | chr7.3:16177176-16177195 | MS.gene50483:intron | 45.0% | |
| ACTTACCTGTGGATGACTTG+TGG | - | chr7.3:16173186-16173205 | None:intergenic | 45.0% | |
| AGGTTCGAGCTGGAATAGTT+GGG | + | chr7.3:16174950-16174969 | MS.gene50483:intron | 45.0% | |
| ATCTCAATCTCCCACCATTC+AGG | + | chr7.3:16172480-16172499 | MS.gene50483:CDS | 45.0% | |
| ATCTTGAAAACACGGAGAGG+TGG | - | chr7.3:16174093-16174112 | None:intergenic | 45.0% | |
| CAACTGCAGATCGAAATGCT+TGG | + | chr7.3:16173978-16173997 | MS.gene50483:CDS | 45.0% | |
| GAAACCACTGTCCAATACCA+AGG | - | chr7.3:16173070-16173089 | None:intergenic | 45.0% | |
| GAAGAAGAAGAACCAAGCAG+CGG | - | chr7.3:16176787-16176806 | None:intergenic | 45.0% | |
| GAATGGTAGGAGGAAAGAGA+TGG | + | chr7.3:16177205-16177224 | MS.gene50483:intron | 45.0% | |
| GAGCAGGTAAAGAGATGAAG+AGG | + | chr7.3:16177240-16177259 | MS.gene50483:intron | 45.0% | |
| GCTCAAGCAAGAAACAATGG+TGG | + | chr7.3:16175849-16175868 | MS.gene50483:intron | 45.0% | |
| GTCAAGACCAGTCCAAAGAT+CGG | - | chr7.3:16172935-16172954 | None:intergenic | 45.0% | |
| GTGCCCTGTACATAAAGCAT+AGG | - | chr7.3:16174137-16174156 | None:intergenic | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | + | chr7.3:16176542-16176561 | MS.gene50483:intron | 45.0% | |
| TAAAAGACACCACCAAAGGG+TGG | - | chr7.3:16176561-16176542 | None:intergenic | 45.0% | |
| TAGGTTCGAGCTGGAATAGT+TGG | + | chr7.3:16174949-16174968 | MS.gene50483:intron | 45.0% | |
| TCATCATGACATGCATCCCT+TGG | + | chr7.3:16176117-16176136 | MS.gene50483:intron | 45.0% | |
| TCTCAGCCTTTGTTCAATGC+AGG | + | chr7.3:16176202-16176221 | MS.gene50483:intron | 45.0% | |
| TCTCGACCTGCATTGAACAA+AGG | - | chr7.3:16176211-16176230 | None:intergenic | 45.0% | |
| TTGTTTCCTGACGCTAGTGT+TGG | + | chr7.3:16175153-16175172 | MS.gene50483:intron | 45.0% | |
| ! | AAAGGTTTTACGACCTGTGC+AGG | + | chr7.3:16172975-16172994 | MS.gene50483:CDS | 45.0% |
| ! | GAATGGTGGGAGATTGAGAT+TGG | - | chr7.3:16172480-16172499 | None:intergenic | 45.0% |
| ! | GCATGCGTTTTCGAATTTGG+AGG | - | chr7.3:16176765-16176784 | None:intergenic | 45.0% |
| ! | TACTCCTTGGTATTGGACAG+TGG | + | chr7.3:16173063-16173082 | MS.gene50483:intron | 45.0% |
| ! | TGGAGAGAGGTCTTATGATG+TGG | + | chr7.3:16176036-16176055 | MS.gene50483:CDS | 45.0% |
| ! | TGGGAAAGATCTTGAGTTGC+TGG | + | chr7.3:16175940-16175959 | MS.gene50483:CDS | 45.0% |
| ! | TGTACCGACGTTGTCTTTAG+TGG | + | chr7.3:16173248-16173267 | MS.gene50483:intron | 45.0% |
| ! | TGTGGATGACTTGTGGACAA+CGG | - | chr7.3:16173179-16173198 | None:intergenic | 45.0% |
| ! | TTGATAACCCAAACATCCCC+TGG | - | chr7.3:16173553-16173572 | None:intergenic | 45.0% |
| !! | ATTCGCATTGGAAGTATCCC+AGG | - | chr7.3:16175971-16175990 | None:intergenic | 45.0% |
| !! | ATATATATATATATATATAG+AGG | - | chr7.3:16176391-16176372 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATAG+GGG | + | chr7.3:16176372-16176391 | MS.gene50483:intron | 5.0% |
| !!! | TTTAGTATTTTATTTATTTT+AGG | + | chr7.3:16175545-16175564 | MS.gene50483:intron | 5.0% |
| AACCATTCCAAGCTGCCCAT+TGG | - | chr7.3:16174044-16174063 | None:intergenic | 50.0% | |
| AAGTGGAGAACCTGCTACTG+CGG | - | chr7.3:16172432-16172451 | None:intergenic | 50.0% | |
| AATGGGCAGCTTGGAATGGT+TGG | + | chr7.3:16174043-16174062 | MS.gene50483:intron | 50.0% | |
| ACAGTACCAACACTAGCGTC+AGG | - | chr7.3:16175162-16175181 | None:intergenic | 50.0% | |
| ACATTCGATGGTTCCGAAGG+AGG | + | chr7.3:16172901-16172920 | MS.gene50483:CDS | 50.0% | |
| AGGAGCTGCAGGAAAGTTGT+AGG | - | chr7.3:16174493-16174512 | None:intergenic | 50.0% | |
| AGGTTGCGTCCATTAGGACT+TGG | - | chr7.3:16175328-16175347 | None:intergenic | 50.0% | |
| CAAAGGACTACTTCCTCGTC+CGG | + | chr7.3:16174217-16174236 | MS.gene50483:CDS | 50.0% | |
| CAACAGAGGAAAGCCAATGC+TGG | + | chr7.3:16175407-16175426 | MS.gene50483:intron | 50.0% | |
| CATTCGATGGTTCCGAAGGA+GGG | + | chr7.3:16172902-16172921 | MS.gene50483:CDS | 50.0% | |
| CTGCGGGTGGGAATAAATTG+TGG | - | chr7.3:16172415-16172434 | None:intergenic | 50.0% | |
| GGAGATTGAGATTGGAGGGT+TGG | - | chr7.3:16172472-16172491 | None:intergenic | 50.0% | |
| GGGATCTTGAAAACACGGAG+AGG | - | chr7.3:16174096-16174115 | None:intergenic | 50.0% | |
| GGTGGGAGATTGAGATTGGA+GGG | - | chr7.3:16172476-16172495 | None:intergenic | 50.0% | |
| GTACAGGGCACATTGAAGCT+AGG | + | chr7.3:16174146-16174165 | MS.gene50483:intron | 50.0% | |
| GTGTGTGTGTGTGTGTGTGT+GGG | - | chr7.3:16175274-16175293 | None:intergenic | 50.0% | |
| GTTGTCCACAAGTCATCCAC+AGG | + | chr7.3:16173178-16173197 | MS.gene50483:CDS | 50.0% | |
| TCTCTTGTAACTCCTGGCCT+TGG | - | chr7.3:16175042-16175061 | None:intergenic | 50.0% | |
| TGGTGGGAGATTGAGATTGG+AGG | - | chr7.3:16172477-16172496 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+GGG | - | chr7.3:16175273-16175292 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | - | chr7.3:16175273-16175292 | None:intergenic | 50.0% | |
| TGTTACAAGCCACCCTTTGG+TGG | + | chr7.3:16177472-16177491 | MS.gene50483:intron | 50.0% | |
| TGTTACAAGCCACCCTTTGG+TGG | - | chr7.3:16177491-16177472 | None:intergenic | 50.0% | |
| TTGAAAACACGGAGAGGTGG+AGG | - | chr7.3:16174090-16174109 | None:intergenic | 50.0% | |
| ! | GCGGCATGCGTTTTCGAATT+TGG | - | chr7.3:16176768-16176787 | None:intergenic | 50.0% |
| ! | GGTATTGGACAGTGGTTTCC+TGG | + | chr7.3:16173071-16173090 | MS.gene50483:intron | 50.0% |
| ! | TTATAGAGGTACGAGACGGG+CGG | + | chr7.3:16173150-16173169 | MS.gene50483:CDS | 50.0% |
| ! | TTGAGTTGCTGGACTCTCCT+GGG | + | chr7.3:16175951-16175970 | MS.gene50483:CDS | 50.0% |
| ! | TTTGGAGGAGAGAAGCGTAC+AGG | - | chr7.3:16176750-16176769 | None:intergenic | 50.0% |
| !! | GACTGGTCACTGATTCGCAT+TGG | - | chr7.3:16175983-16176002 | None:intergenic | 50.0% |
| !! | TTGAGATTGGAGGGTTGGTG+TGG | - | chr7.3:16172467-16172486 | None:intergenic | 50.0% |
| ACTGGGACCGATCTTTGGAC+TGG | + | chr7.3:16172925-16172944 | MS.gene50483:CDS | 55.0% | |
| AGGGCACATTGAAGCTAGGC+CGG | + | chr7.3:16174150-16174169 | MS.gene50483:intron | 55.0% | |
| AGTGGAGAACCTGCTACTGC+GGG | - | chr7.3:16172431-16172450 | None:intergenic | 55.0% | |
| ATGGAAGAGAGCAGTGGAGC+AGG | + | chr7.3:16177224-16177243 | MS.gene50483:intron | 55.0% | |
| ATGGTTCCGAAGGAGGGACT+GGG | + | chr7.3:16172908-16172927 | MS.gene50483:CDS | 55.0% | |
| CGGACGAGGAAGTAGTCCTT+TGG | - | chr7.3:16174219-16174238 | None:intergenic | 55.0% | |
| CTCCAATGGGCAGCTTGGAA+TGG | + | chr7.3:16174039-16174058 | MS.gene50483:CDS | 55.0% | |
| CTTCATTGGAGAGACCGCCT+AGG | + | chr7.3:16177925-16177944 | MS.gene50483:CDS | 55.0% | |
| GAAGCTAGGCCGGTTAGCAA+AGG | + | chr7.3:16174160-16174179 | MS.gene50483:CDS | 55.0% | |
| GTCTTCTCCAATGGGCAGCT+TGG | + | chr7.3:16174034-16174053 | MS.gene50483:CDS | 55.0% | |
| GTGTGTGTGTGTGTGTGTGG+GGG | - | chr7.3:16175272-16175291 | None:intergenic | 55.0% | |
| TAGAAGCAACCTACCGGACG+AGG | - | chr7.3:16174233-16174252 | None:intergenic | 55.0% | |
| TGTGTGTGTGTGTGTGTGGG+GGG | - | chr7.3:16175271-16175290 | None:intergenic | 55.0% | |
| TTATTCCCACCCGCAGTAGC+AGG | + | chr7.3:16172419-16172438 | MS.gene50483:CDS | 55.0% | |
| ! | CGGCTTAGGTTGCGTCCATT+AGG | - | chr7.3:16175334-16175353 | None:intergenic | 55.0% |
| ! | CGTACAGGAAGGAGGCACAT+GGG | - | chr7.3:16176735-16176754 | None:intergenic | 55.0% |
| ! | CTTGAGTTGCTGGACTCTCC+TGG | + | chr7.3:16175950-16175969 | MS.gene50483:CDS | 55.0% |
| ! | GAGAGAAGCGTACAGGAAGG+AGG | - | chr7.3:16176743-16176762 | None:intergenic | 55.0% |
| ! | GAGGAGAGAAGCGTACAGGA+AGG | - | chr7.3:16176746-16176765 | None:intergenic | 55.0% |
| ATCGGTCCCAGTCCCTCCTT+CGG | - | chr7.3:16172917-16172936 | None:intergenic | 60.0% | |
| CGAAAACGCATGCCGCTGCT+TGG | + | chr7.3:16176772-16176791 | MS.gene50483:intron | 60.0% | |
| GAATGTGCCCAGCAGCTCCA+AGG | + | chr7.3:16175022-16175041 | MS.gene50483:CDS | 60.0% | |
| GAGAACCTGCTACTGCGGGT+GGG | - | chr7.3:16172427-16172446 | None:intergenic | 60.0% | |
| GAGGGACTGGGACCGATCTT+TGG | + | chr7.3:16172920-16172939 | MS.gene50483:CDS | 60.0% | |
| GATGGTTCCGAAGGAGGGAC+TGG | + | chr7.3:16172907-16172926 | MS.gene50483:CDS | 60.0% | |
| GGACTACTTCCTCGTCCGGT+AGG | + | chr7.3:16174221-16174240 | MS.gene50483:intron | 60.0% | |
| GTGTGTGTGTGTGTGTGGGG+GGG | - | chr7.3:16175270-16175289 | None:intergenic | 60.0% | |
| TGTGGCAGCGAGAGGTGAAG+TGG | - | chr7.3:16172449-16172468 | None:intergenic | 60.0% | |
| TGTGTGTGTGTGTGTGGGGG+GGG | - | chr7.3:16175269-16175288 | None:intergenic | 60.0% | |
| ! | GCGTACAGGAAGGAGGCACA+TGG | - | chr7.3:16176736-16176755 | None:intergenic | 60.0% |
| GGAGAACCTGCTACTGCGGG+TGG | - | chr7.3:16172428-16172447 | None:intergenic | 65.0% | |
| GTGTGTGTGTGTGTGGGGGG+GGG | - | chr7.3:16175268-16175287 | None:intergenic | 65.0% | |
| TGTGTGTGTGTGTGGGGGGG+GGG | - | chr7.3:16175267-16175286 | None:intergenic | 65.0% | |
| !! | ACTCCTGGCCTTGGAGCTGC+TGG | - | chr7.3:16175033-16175052 | None:intergenic | 65.0% |
| !! | AGGGTTGGTGTGGCAGCGAG+AGG | - | chr7.3:16172457-16172476 | None:intergenic | 65.0% |
| !! | CTCCTGGCCTTGGAGCTGCT+GGG | - | chr7.3:16175032-16175051 | None:intergenic | 65.0% |
| GTGTGTGTGTGTGGGGGGGG+GGG | - | chr7.3:16175266-16175285 | None:intergenic | 70.0% | |
| TGCCCAGCAGCTCCAAGGCC+AGG | + | chr7.3:16175027-16175046 | MS.gene50483:CDS | 70.0% | |
| TGTGTGTGTGTGGGGGGGGG+GGG | - | chr7.3:16175265-16175284 | None:intergenic | 70.0% | |
| GTGTGTGTGTGGGGGGGGGG+GGG | - | chr7.3:16175264-16175283 | None:intergenic | 75.0% | |
| TGTGTGTGTGGGGGGGGGGG+GGG | - | chr7.3:16175263-16175282 | None:intergenic | 75.0% | |
| ! | GTGTGTGTGGGGGGGGGGGG+GGG | - | chr7.3:16175262-16175281 | None:intergenic | 80.0% |
| ! | TGTGTGTGGGGGGGGGGGGG+GGG | - | chr7.3:16175261-16175280 | None:intergenic | 80.0% |
| ! | GTGTGTGGGGGGGGGGGGGG+GGG | - | chr7.3:16175260-16175279 | None:intergenic | 85.0% |
| ! | TGTGTGGGGGGGGGGGGGGG+GGG | - | chr7.3:16175259-16175278 | None:intergenic | 85.0% |
| ! | GTGTGGGGGGGGGGGGGGGG+GGG | - | chr7.3:16175258-16175277 | None:intergenic | 90.0% |
| ! | TGTGGGGGGGGGGGGGGGGG+GGG | - | chr7.3:16175257-16175276 | None:intergenic | 90.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr7.3:16175256-16175275 | None:intergenic | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr7.3:16175255-16175274 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 16172316 | 16177950 | 16172316 | ID=MS.gene50483 |
| chr7.3 | mRNA | 16172316 | 16177950 | 16172316 | ID=MS.gene50483.t1;Parent=MS.gene50483 |
| chr7.3 | exon | 16172316 | 16172501 | 16172316 | ID=MS.gene50483.t1.exon1;Parent=MS.gene50483.t1 |
| chr7.3 | CDS | 16172316 | 16172501 | 16172316 | ID=cds.MS.gene50483.t1;Parent=MS.gene50483.t1 |
| chr7.3 | exon | 16172886 | 16172996 | 16172886 | ID=MS.gene50483.t1.exon2;Parent=MS.gene50483.t1 |
| chr7.3 | CDS | 16172886 | 16172996 | 16172886 | ID=cds.MS.gene50483.t1;Parent=MS.gene50483.t1 |
| chr7.3 | exon | 16173083 | 16173199 | 16173083 | ID=MS.gene50483.t1.exon3;Parent=MS.gene50483.t1 |
| chr7.3 | CDS | 16173083 | 16173199 | 16173083 | ID=cds.MS.gene50483.t1;Parent=MS.gene50483.t1 |
| chr7.3 | exon | 16173917 | 16174060 | 16173917 | ID=MS.gene50483.t1.exon4;Parent=MS.gene50483.t1 |
| chr7.3 | CDS | 16173917 | 16174060 | 16173917 | ID=cds.MS.gene50483.t1;Parent=MS.gene50483.t1 |
| chr7.3 | exon | 16174152 | 16174238 | 16174152 | ID=MS.gene50483.t1.exon5;Parent=MS.gene50483.t1 |
| chr7.3 | CDS | 16174152 | 16174238 | 16174152 | ID=cds.MS.gene50483.t1;Parent=MS.gene50483.t1 |
| chr7.3 | exon | 16174952 | 16175067 | 16174952 | ID=MS.gene50483.t1.exon6;Parent=MS.gene50483.t1 |
| chr7.3 | CDS | 16174952 | 16175067 | 16174952 | ID=cds.MS.gene50483.t1;Parent=MS.gene50483.t1 |
| chr7.3 | exon | 16175928 | 16176109 | 16175928 | ID=MS.gene50483.t1.exon7;Parent=MS.gene50483.t1 |
| chr7.3 | CDS | 16175928 | 16176109 | 16175928 | ID=cds.MS.gene50483.t1;Parent=MS.gene50483.t1 |
| chr7.3 | exon | 16176224 | 16176281 | 16176224 | ID=MS.gene50483.t1.exon8;Parent=MS.gene50483.t1 |
| chr7.3 | CDS | 16176224 | 16176281 | 16176224 | ID=cds.MS.gene50483.t1;Parent=MS.gene50483.t1 |
| chr7.3 | exon | 16177827 | 16177950 | 16177827 | ID=MS.gene50483.t1.exon9;Parent=MS.gene50483.t1 |
| chr7.3 | CDS | 16177827 | 16177950 | 16177827 | ID=cds.MS.gene50483.t1;Parent=MS.gene50483.t1 |
| Gene Sequence |
| Protein sequence |
