Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50585.t1 | XP_013468573.1 | 98.9 | 360 | 1 | 1 | 1 | 357 | 1 | 360 | 1.30E-168 | 602.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50585.t1 | O04336 | 59.4 | 384 | 117 | 11 | 1 | 353 | 1 | 376 | 3.1e-81 | 303.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50585.t1 | A0A072VWY9 | 98.9 | 360 | 1 | 1 | 1 | 357 | 1 | 360 | 9.6e-169 | 602.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene50585.t1 | TF | WRKY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050352 | MS.gene50585 | 0.834374 | 3.11E-56 | -1.69E-46 |
| MS.gene051026 | MS.gene50585 | 0.801017 | 1.10E-48 | -1.69E-46 |
| MS.gene055339 | MS.gene50585 | 0.800264 | 1.56E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50585.t1 | MTR_1g070455 | 98.333 | 360 | 3 | 1 | 1 | 357 | 1 | 360 | 0.0 | 733 |
| MS.gene50585.t1 | MTR_1g009613 | 36.620 | 355 | 162 | 10 | 4 | 347 | 17 | 319 | 9.54e-58 | 191 |
| MS.gene50585.t1 | MTR_4g094908 | 56.044 | 182 | 58 | 4 | 180 | 348 | 152 | 324 | 3.20e-55 | 184 |
| MS.gene50585.t1 | MTR_5g016610 | 74.074 | 108 | 26 | 2 | 242 | 348 | 151 | 257 | 6.01e-53 | 176 |
| MS.gene50585.t1 | MTR_4g127040 | 63.768 | 138 | 39 | 4 | 215 | 349 | 175 | 304 | 1.15e-51 | 174 |
| MS.gene50585.t1 | MTR_3g108960 | 48.466 | 163 | 72 | 5 | 202 | 356 | 222 | 380 | 3.44e-40 | 146 |
| MS.gene50585.t1 | MTR_0117s0040 | 59.494 | 79 | 32 | 0 | 269 | 347 | 53 | 131 | 6.83e-30 | 115 |
| MS.gene50585.t1 | MTR_2g016770 | 55.682 | 88 | 38 | 1 | 265 | 351 | 9 | 96 | 2.07e-27 | 107 |
| MS.gene50585.t1 | MTR_2g016770 | 55.294 | 85 | 37 | 1 | 268 | 351 | 4 | 88 | 3.03e-26 | 104 |
| MS.gene50585.t1 | MTR_2g032030 | 52.475 | 101 | 42 | 3 | 258 | 353 | 230 | 329 | 5.90e-26 | 108 |
| MS.gene50585.t1 | MTR_2g032030 | 52.475 | 101 | 42 | 3 | 258 | 353 | 230 | 329 | 6.50e-26 | 107 |
| MS.gene50585.t1 | MTR_8g087000 | 52.222 | 90 | 36 | 1 | 266 | 348 | 45 | 134 | 8.58e-26 | 104 |
| MS.gene50585.t1 | MTR_2g083870 | 53.191 | 94 | 28 | 2 | 266 | 348 | 50 | 138 | 1.83e-25 | 103 |
| MS.gene50585.t1 | MTR_2g024350 | 61.972 | 71 | 26 | 1 | 287 | 357 | 5 | 74 | 2.37e-25 | 102 |
| MS.gene50585.t1 | MTR_8g087000 | 68.333 | 60 | 19 | 0 | 289 | 348 | 76 | 135 | 4.18e-25 | 102 |
| MS.gene50585.t1 | MTR_7g079040 | 57.831 | 83 | 30 | 1 | 265 | 347 | 134 | 211 | 5.29e-25 | 103 |
| MS.gene50585.t1 | MTR_2g024380 | 54.118 | 85 | 36 | 1 | 265 | 349 | 229 | 310 | 9.48e-25 | 105 |
| MS.gene50585.t1 | MTR_8g028565 | 57.831 | 83 | 30 | 2 | 265 | 347 | 135 | 212 | 4.13e-23 | 99.0 |
| MS.gene50585.t1 | MTR_7g109600 | 50.562 | 89 | 40 | 1 | 263 | 347 | 22 | 110 | 5.11e-23 | 97.1 |
| MS.gene50585.t1 | MTR_1g099600 | 66.102 | 59 | 20 | 0 | 291 | 349 | 186 | 244 | 3.81e-22 | 95.5 |
| MS.gene50585.t1 | MTR_8g098945 | 54.286 | 70 | 28 | 1 | 278 | 347 | 121 | 186 | 3.39e-19 | 86.7 |
| MS.gene50585.t1 | MTR_3g053330 | 51.389 | 72 | 35 | 0 | 286 | 357 | 247 | 318 | 3.61e-19 | 89.0 |
| MS.gene50585.t1 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 287 | 347 | 249 | 308 | 5.29e-19 | 88.2 |
| MS.gene50585.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 286 | 352 | 267 | 331 | 5.46e-19 | 88.2 |
| MS.gene50585.t1 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 287 | 347 | 227 | 286 | 5.47e-19 | 87.8 |
| MS.gene50585.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 286 | 352 | 254 | 318 | 5.86e-19 | 88.2 |
| MS.gene50585.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 286 | 352 | 411 | 475 | 7.50e-19 | 88.2 |
| MS.gene50585.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 286 | 352 | 398 | 462 | 7.50e-19 | 88.2 |
| MS.gene50585.t1 | MTR_4g082580 | 46.591 | 88 | 45 | 2 | 270 | 357 | 258 | 343 | 8.88e-19 | 87.0 |
| MS.gene50585.t1 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 287 | 347 | 361 | 420 | 8.97e-19 | 87.8 |
| MS.gene50585.t1 | MTR_8g067635 | 48.913 | 92 | 40 | 2 | 265 | 356 | 327 | 411 | 1.23e-18 | 87.4 |
| MS.gene50585.t1 | MTR_7g110720 | 44.565 | 92 | 43 | 1 | 266 | 357 | 200 | 283 | 1.30e-18 | 87.0 |
| MS.gene50585.t1 | MTR_7g109800 | 44.578 | 83 | 45 | 1 | 265 | 347 | 120 | 201 | 1.38e-18 | 85.5 |
| MS.gene50585.t1 | MTR_5g042920 | 34.641 | 153 | 94 | 3 | 205 | 357 | 239 | 385 | 1.39e-18 | 87.0 |
| MS.gene50585.t1 | MTR_5g042920 | 53.968 | 63 | 26 | 3 | 286 | 347 | 146 | 206 | 1.66e-12 | 68.6 |
| MS.gene50585.t1 | MTR_7g110720 | 44.565 | 92 | 43 | 1 | 266 | 357 | 173 | 256 | 1.51e-18 | 86.7 |
| MS.gene50585.t1 | MTR_1g013760 | 47.945 | 73 | 36 | 1 | 276 | 348 | 128 | 198 | 1.84e-18 | 84.7 |
| MS.gene50585.t1 | MTR_4g094412 | 57.895 | 57 | 24 | 0 | 291 | 347 | 235 | 291 | 2.20e-18 | 86.7 |
| MS.gene50585.t1 | MTR_4g094412 | 57.895 | 57 | 24 | 0 | 291 | 347 | 244 | 300 | 2.39e-18 | 86.3 |
| MS.gene50585.t1 | MTR_2g023930 | 47.436 | 78 | 41 | 0 | 274 | 351 | 289 | 366 | 3.16e-18 | 86.3 |
| MS.gene50585.t1 | MTR_7g011820 | 63.158 | 57 | 20 | 1 | 291 | 347 | 411 | 466 | 3.17e-18 | 86.3 |
| MS.gene50585.t1 | MTR_7g011820 | 53.125 | 64 | 27 | 3 | 287 | 349 | 224 | 285 | 3.72e-13 | 70.9 |
| MS.gene50585.t1 | MTR_3g106060 | 55.172 | 58 | 26 | 0 | 291 | 348 | 139 | 196 | 4.08e-18 | 84.0 |
| MS.gene50585.t1 | MTR_4g007060 | 43.478 | 92 | 48 | 2 | 264 | 351 | 98 | 189 | 4.18e-18 | 83.6 |
| MS.gene50585.t1 | MTR_7g062220 | 49.367 | 79 | 36 | 2 | 273 | 351 | 110 | 184 | 4.18e-18 | 84.3 |
| MS.gene50585.t1 | MTR_4g007060 | 43.478 | 92 | 48 | 2 | 264 | 351 | 132 | 223 | 5.98e-18 | 84.0 |
| MS.gene50585.t1 | MTR_4g013260 | 49.351 | 77 | 35 | 2 | 274 | 347 | 317 | 392 | 7.38e-18 | 85.1 |
| MS.gene50585.t1 | MTR_4g013260 | 50.847 | 59 | 28 | 1 | 291 | 349 | 185 | 242 | 3.56e-13 | 70.9 |
| MS.gene50585.t1 | MTR_2g088000 | 47.436 | 78 | 41 | 0 | 274 | 351 | 333 | 410 | 8.26e-18 | 85.1 |
| MS.gene50585.t1 | MTR_7g100510 | 57.895 | 57 | 23 | 1 | 291 | 347 | 362 | 417 | 8.43e-18 | 84.7 |
| MS.gene50585.t1 | MTR_7g100510 | 52.055 | 73 | 30 | 4 | 278 | 349 | 178 | 246 | 8.80e-15 | 75.5 |
| MS.gene50585.t1 | MTR_8g069935 | 57.627 | 59 | 25 | 0 | 291 | 349 | 332 | 390 | 1.15e-17 | 84.3 |
| MS.gene50585.t1 | MTR_4g049790 | 57.895 | 57 | 24 | 0 | 291 | 347 | 313 | 369 | 1.89e-17 | 84.0 |
| MS.gene50585.t1 | MTR_7g071120 | 33.143 | 175 | 95 | 6 | 193 | 357 | 227 | 389 | 1.96e-17 | 83.6 |
| MS.gene50585.t1 | MTR_7g071120 | 52.542 | 59 | 26 | 2 | 291 | 349 | 167 | 223 | 6.15e-12 | 67.0 |
| MS.gene50585.t1 | MTR_4g130900 | 57.895 | 57 | 23 | 1 | 291 | 347 | 360 | 415 | 2.26e-17 | 83.6 |
| MS.gene50585.t1 | MTR_3g104750 | 41.414 | 99 | 56 | 2 | 249 | 347 | 64 | 160 | 3.80e-17 | 78.2 |
| MS.gene50585.t1 | MTR_5g074400 | 36.508 | 126 | 72 | 2 | 229 | 347 | 352 | 476 | 3.82e-17 | 83.2 |
| MS.gene50585.t1 | MTR_5g074400 | 52.542 | 59 | 26 | 2 | 291 | 349 | 244 | 300 | 1.61e-12 | 68.9 |
| MS.gene50585.t1 | MTR_3g031220 | 48.718 | 78 | 39 | 1 | 270 | 347 | 345 | 421 | 4.10e-17 | 82.8 |
| MS.gene50585.t1 | MTR_3g031220 | 54.237 | 59 | 25 | 2 | 291 | 349 | 199 | 255 | 4.07e-13 | 70.5 |
| MS.gene50585.t1 | MTR_7g080000 | 48.193 | 83 | 38 | 3 | 273 | 352 | 412 | 492 | 4.16e-17 | 83.2 |
| MS.gene50585.t1 | MTR_7g080000 | 54.237 | 59 | 25 | 2 | 291 | 349 | 235 | 291 | 1.23e-11 | 66.2 |
| MS.gene50585.t1 | MTR_4g094588 | 54.839 | 62 | 26 | 2 | 291 | 352 | 179 | 238 | 4.22e-17 | 81.6 |
| MS.gene50585.t1 | MTR_7g009730 | 56.140 | 57 | 25 | 0 | 291 | 347 | 220 | 276 | 5.43e-17 | 82.4 |
| MS.gene50585.t1 | MTR_5g091390 | 52.239 | 67 | 31 | 1 | 291 | 357 | 158 | 223 | 6.42e-17 | 80.9 |
| MS.gene50585.t1 | MTR_4g132430 | 52.459 | 61 | 29 | 0 | 291 | 351 | 128 | 188 | 6.73e-17 | 81.3 |
| MS.gene50585.t1 | MTR_3g009470 | 37.500 | 112 | 57 | 3 | 248 | 347 | 441 | 551 | 8.11e-17 | 82.4 |
| MS.gene50585.t1 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 291 | 351 | 281 | 339 | 2.93e-12 | 68.2 |
| MS.gene50585.t1 | MTR_4g107970 | 53.448 | 58 | 27 | 0 | 291 | 348 | 179 | 236 | 9.35e-17 | 81.6 |
| MS.gene50585.t1 | MTR_4g132430 | 52.308 | 65 | 28 | 1 | 291 | 355 | 262 | 323 | 9.55e-17 | 81.6 |
| MS.gene50585.t1 | MTR_2g105060 | 51.667 | 60 | 29 | 0 | 288 | 347 | 167 | 226 | 1.02e-16 | 80.1 |
| MS.gene50585.t1 | MTR_2g105060 | 52.632 | 57 | 27 | 0 | 291 | 347 | 95 | 151 | 1.12e-16 | 79.0 |
| MS.gene50585.t1 | MTR_4g107970 | 53.448 | 58 | 27 | 0 | 291 | 348 | 256 | 313 | 1.33e-16 | 81.6 |
| MS.gene50585.t1 | MTR_8g067650 | 47.170 | 106 | 45 | 3 | 258 | 356 | 300 | 401 | 1.44e-16 | 81.3 |
| MS.gene50585.t1 | MTR_1g015140 | 38.384 | 99 | 58 | 2 | 249 | 347 | 63 | 158 | 1.44e-16 | 76.6 |
| MS.gene50585.t1 | MTR_2g045360 | 52.459 | 61 | 29 | 0 | 291 | 351 | 212 | 272 | 1.52e-16 | 80.9 |
| MS.gene50585.t1 | MTR_7g080020 | 48.780 | 82 | 37 | 3 | 274 | 352 | 474 | 553 | 1.75e-16 | 81.3 |
| MS.gene50585.t1 | MTR_7g080020 | 52.542 | 59 | 26 | 2 | 291 | 349 | 281 | 337 | 4.29e-11 | 64.7 |
| MS.gene50585.t1 | MTR_6g053200 | 43.678 | 87 | 46 | 1 | 263 | 349 | 306 | 389 | 6.16e-16 | 79.3 |
| MS.gene50585.t1 | MTR_1g013790 | 46.970 | 66 | 34 | 1 | 288 | 353 | 99 | 163 | 7.19e-16 | 77.0 |
| MS.gene50585.t1 | MTR_5g097490 | 56.897 | 58 | 24 | 1 | 291 | 348 | 253 | 309 | 9.33e-16 | 78.2 |
| MS.gene50585.t1 | MTR_1g077780 | 43.182 | 88 | 48 | 2 | 270 | 357 | 42 | 127 | 9.48e-16 | 73.9 |
| MS.gene50585.t1 | MTR_8g007270 | 39.583 | 96 | 52 | 3 | 265 | 357 | 126 | 218 | 9.58e-16 | 75.9 |
| MS.gene50585.t1 | MTR_8g092010 | 52.459 | 61 | 28 | 1 | 287 | 347 | 105 | 164 | 2.51e-15 | 73.9 |
| MS.gene50585.t1 | MTR_5g043880 | 41.860 | 86 | 49 | 1 | 265 | 350 | 99 | 183 | 2.67e-15 | 75.5 |
| MS.gene50585.t1 | MTR_7g079010 | 43.750 | 80 | 41 | 2 | 271 | 347 | 119 | 197 | 3.09e-15 | 74.3 |
| MS.gene50585.t1 | MTR_8g092140 | 47.619 | 63 | 32 | 1 | 286 | 348 | 156 | 217 | 3.39e-15 | 74.7 |
| MS.gene50585.t1 | MTR_1g086790 | 39.759 | 83 | 49 | 1 | 265 | 347 | 133 | 214 | 3.42e-15 | 75.9 |
| MS.gene50585.t1 | MTR_5g067680 | 38.462 | 117 | 64 | 4 | 247 | 356 | 155 | 270 | 4.77e-15 | 75.9 |
| MS.gene50585.t1 | MTR_3g090860 | 54.386 | 57 | 24 | 1 | 291 | 345 | 134 | 190 | 7.13e-15 | 75.1 |
| MS.gene50585.t1 | MTR_3g095080 | 47.619 | 63 | 32 | 1 | 286 | 348 | 140 | 201 | 8.08e-15 | 73.2 |
| MS.gene50585.t1 | MTR_4g049760 | 56.604 | 53 | 23 | 0 | 295 | 347 | 295 | 347 | 9.23e-15 | 75.9 |
| MS.gene50585.t1 | MTR_3g095080 | 47.619 | 63 | 32 | 1 | 286 | 348 | 164 | 225 | 9.81e-15 | 73.6 |
| MS.gene50585.t1 | MTR_3g095040 | 42.500 | 80 | 45 | 1 | 268 | 347 | 96 | 174 | 5.83e-14 | 70.5 |
| MS.gene50585.t1 | MTR_2g033820 | 50.877 | 57 | 27 | 1 | 291 | 347 | 204 | 259 | 6.66e-14 | 72.4 |
| MS.gene50585.t1 | MTR_7g117200 | 46.429 | 84 | 41 | 3 | 266 | 345 | 92 | 175 | 1.72e-13 | 70.9 |
| MS.gene50585.t1 | MTR_1g078260 | 53.846 | 65 | 28 | 2 | 287 | 350 | 244 | 307 | 2.18e-13 | 71.2 |
| MS.gene50585.t1 | MTR_3g031220 | 54.237 | 59 | 25 | 2 | 291 | 349 | 199 | 255 | 2.23e-13 | 70.9 |
| MS.gene50585.t1 | MTR_4g122530 | 47.368 | 57 | 29 | 1 | 291 | 347 | 209 | 264 | 3.83e-13 | 70.5 |
| MS.gene50585.t1 | MTR_8g027860 | 41.860 | 86 | 47 | 2 | 263 | 345 | 108 | 193 | 8.70e-13 | 68.9 |
| MS.gene50585.t1 | MTR_7g028415 | 45.161 | 62 | 33 | 1 | 286 | 347 | 89 | 149 | 9.31e-13 | 66.2 |
| MS.gene50585.t1 | MTR_7g028710 | 45.161 | 62 | 33 | 1 | 286 | 347 | 89 | 149 | 9.31e-13 | 66.2 |
| MS.gene50585.t1 | MTR_8g099350 | 41.667 | 84 | 46 | 2 | 265 | 345 | 106 | 189 | 1.73e-12 | 68.2 |
| MS.gene50585.t1 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 291 | 351 | 281 | 339 | 2.11e-12 | 68.6 |
| MS.gene50585.t1 | MTR_5g018380 | 51.724 | 58 | 25 | 2 | 290 | 347 | 123 | 177 | 2.66e-12 | 65.1 |
| MS.gene50585.t1 | MTR_6g086555 | 30.968 | 155 | 91 | 5 | 195 | 348 | 125 | 264 | 3.21e-12 | 67.8 |
| MS.gene50585.t1 | MTR_8g087000 | 64.103 | 39 | 14 | 0 | 310 | 348 | 35 | 73 | 4.14e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50585.t1 | AT2G30590 | 55.039 | 387 | 129 | 15 | 1 | 353 | 1 | 376 | 1.20e-114 | 338 |
| MS.gene50585.t1 | AT3G04670 | 51.381 | 362 | 124 | 13 | 1 | 350 | 1 | 322 | 1.17e-104 | 311 |
| MS.gene50585.t1 | AT5G28650 | 48.189 | 359 | 140 | 9 | 1 | 350 | 1 | 322 | 3.80e-100 | 299 |
| MS.gene50585.t1 | AT3G04670 | 47.853 | 326 | 118 | 13 | 1 | 314 | 1 | 286 | 5.70e-76 | 236 |
| MS.gene50585.t1 | AT4G31550 | 51.087 | 184 | 60 | 6 | 177 | 347 | 137 | 303 | 1.31e-53 | 179 |
| MS.gene50585.t1 | AT4G31550 | 51.630 | 184 | 58 | 7 | 177 | 347 | 137 | 302 | 9.25e-53 | 177 |
| MS.gene50585.t1 | AT2G24570 | 56.376 | 149 | 51 | 3 | 211 | 347 | 154 | 300 | 1.24e-52 | 177 |
| MS.gene50585.t1 | AT4G24240 | 54.545 | 176 | 55 | 6 | 184 | 350 | 182 | 341 | 1.56e-52 | 177 |
| MS.gene50585.t1 | AT2G23320 | 70.000 | 110 | 29 | 2 | 242 | 348 | 190 | 298 | 1.33e-50 | 171 |
| MS.gene50585.t1 | AT1G29280 | 55.435 | 92 | 34 | 3 | 263 | 347 | 40 | 131 | 2.76e-27 | 108 |
| MS.gene50585.t1 | AT4G31550 | 44.218 | 147 | 51 | 7 | 177 | 310 | 137 | 265 | 4.20e-26 | 105 |
| MS.gene50585.t1 | AT3G58710 | 50.980 | 102 | 33 | 3 | 266 | 356 | 40 | 135 | 1.65e-25 | 103 |
| MS.gene50585.t1 | AT2G34830 | 49.524 | 105 | 47 | 2 | 254 | 353 | 174 | 277 | 1.89e-25 | 106 |
| MS.gene50585.t1 | AT2G34830 | 49.524 | 105 | 47 | 2 | 254 | 353 | 183 | 286 | 2.29e-25 | 106 |
| MS.gene50585.t1 | AT4G24240 | 47.059 | 136 | 47 | 6 | 184 | 310 | 182 | 301 | 2.67e-25 | 104 |
| MS.gene50585.t1 | AT2G23320 | 66.667 | 72 | 20 | 2 | 242 | 310 | 190 | 260 | 7.31e-25 | 102 |
| MS.gene50585.t1 | AT3G58710 | 50.000 | 102 | 34 | 3 | 266 | 356 | 41 | 136 | 7.57e-25 | 102 |
| MS.gene50585.t1 | AT4G01250 | 45.600 | 125 | 62 | 2 | 224 | 347 | 66 | 185 | 4.16e-24 | 100 |
| MS.gene50585.t1 | AT1G30650 | 52.874 | 87 | 36 | 1 | 266 | 347 | 188 | 274 | 8.16e-24 | 102 |
| MS.gene50585.t1 | AT5G52830 | 52.941 | 85 | 36 | 1 | 265 | 349 | 144 | 224 | 7.10e-22 | 95.5 |
| MS.gene50585.t1 | AT4G23550 | 60.317 | 63 | 24 | 1 | 291 | 353 | 141 | 202 | 1.14e-19 | 88.6 |
| MS.gene50585.t1 | AT5G26170 | 52.308 | 65 | 30 | 1 | 286 | 350 | 109 | 172 | 1.16e-19 | 85.5 |
| MS.gene50585.t1 | AT4G18170 | 38.017 | 121 | 67 | 3 | 232 | 352 | 120 | 232 | 2.62e-19 | 87.8 |
| MS.gene50585.t1 | AT2G04880 | 58.209 | 67 | 27 | 1 | 285 | 351 | 278 | 343 | 3.10e-19 | 89.0 |
| MS.gene50585.t1 | AT2G04880 | 58.209 | 67 | 27 | 1 | 285 | 351 | 302 | 367 | 3.21e-19 | 89.0 |
| MS.gene50585.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 267 | 352 | 119 | 201 | 1.09e-18 | 84.0 |
| MS.gene50585.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 282 | 349 | 19 | 82 | 1.28e-12 | 67.0 |
| MS.gene50585.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 267 | 352 | 119 | 201 | 1.09e-18 | 84.0 |
| MS.gene50585.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 282 | 349 | 19 | 82 | 1.28e-12 | 67.0 |
| MS.gene50585.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 267 | 352 | 119 | 201 | 1.09e-18 | 84.0 |
| MS.gene50585.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 282 | 349 | 19 | 82 | 1.28e-12 | 67.0 |
| MS.gene50585.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 267 | 352 | 119 | 201 | 1.09e-18 | 84.0 |
| MS.gene50585.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 282 | 349 | 19 | 82 | 1.28e-12 | 67.0 |
| MS.gene50585.t1 | AT2G38470 | 59.016 | 61 | 24 | 1 | 287 | 347 | 359 | 418 | 2.67e-18 | 86.7 |
| MS.gene50585.t1 | AT2G38470 | 54.237 | 59 | 25 | 2 | 291 | 349 | 185 | 241 | 3.16e-13 | 71.2 |
| MS.gene50585.t1 | AT1G13960 | 47.436 | 78 | 40 | 1 | 270 | 347 | 236 | 312 | 2.68e-18 | 85.5 |
| MS.gene50585.t1 | AT1G13960 | 56.452 | 62 | 24 | 3 | 287 | 347 | 72 | 131 | 1.94e-14 | 73.9 |
| MS.gene50585.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 286 | 352 | 201 | 265 | 2.97e-18 | 85.5 |
| MS.gene50585.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 286 | 352 | 201 | 265 | 2.97e-18 | 85.5 |
| MS.gene50585.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 286 | 352 | 201 | 265 | 2.97e-18 | 85.5 |
| MS.gene50585.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 286 | 352 | 201 | 265 | 2.97e-18 | 85.5 |
| MS.gene50585.t1 | AT4G04450 | 47.561 | 82 | 40 | 1 | 274 | 355 | 182 | 260 | 3.47e-18 | 85.9 |
| MS.gene50585.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 267 | 352 | 212 | 294 | 4.02e-18 | 84.3 |
| MS.gene50585.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 282 | 349 | 112 | 175 | 2.59e-12 | 67.4 |
| MS.gene50585.t1 | AT4G04450 | 47.561 | 82 | 40 | 1 | 274 | 355 | 276 | 354 | 4.09e-18 | 85.9 |
| MS.gene50585.t1 | AT1G13960 | 44.211 | 95 | 39 | 2 | 266 | 347 | 372 | 465 | 4.77e-18 | 85.9 |
| MS.gene50585.t1 | AT1G13960 | 48.101 | 79 | 32 | 4 | 269 | 347 | 215 | 284 | 2.78e-14 | 74.3 |
| MS.gene50585.t1 | AT1G68150 | 57.895 | 57 | 24 | 0 | 291 | 347 | 236 | 292 | 5.27e-18 | 84.7 |
| MS.gene50585.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 286 | 352 | 305 | 369 | 5.37e-18 | 85.5 |
| MS.gene50585.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 286 | 352 | 377 | 441 | 5.78e-18 | 85.5 |
| MS.gene50585.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 286 | 352 | 337 | 401 | 6.05e-18 | 85.5 |
| MS.gene50585.t1 | AT5G45050 | 45.783 | 83 | 41 | 1 | 265 | 347 | 1131 | 1209 | 7.46e-18 | 85.9 |
| MS.gene50585.t1 | AT5G45050 | 45.783 | 83 | 41 | 1 | 265 | 347 | 1159 | 1237 | 8.36e-18 | 85.5 |
| MS.gene50585.t1 | AT5G45050 | 45.783 | 83 | 41 | 1 | 265 | 347 | 1020 | 1098 | 8.85e-18 | 85.5 |
| MS.gene50585.t1 | AT1G62300 | 44.186 | 86 | 40 | 1 | 266 | 351 | 296 | 373 | 1.65e-17 | 84.3 |
| MS.gene50585.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 274 | 351 | 281 | 358 | 2.37e-17 | 83.6 |
| MS.gene50585.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 274 | 351 | 281 | 358 | 2.37e-17 | 83.6 |
| MS.gene50585.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 274 | 351 | 281 | 358 | 2.37e-17 | 83.6 |
| MS.gene50585.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 274 | 351 | 281 | 358 | 2.37e-17 | 83.6 |
| MS.gene50585.t1 | AT1G29860 | 44.595 | 74 | 40 | 1 | 274 | 347 | 120 | 192 | 2.44e-17 | 81.6 |
| MS.gene50585.t1 | AT2G03340 | 46.154 | 78 | 41 | 1 | 270 | 347 | 395 | 471 | 2.82e-17 | 83.2 |
| MS.gene50585.t1 | AT2G03340 | 55.556 | 63 | 25 | 3 | 286 | 347 | 245 | 305 | 8.26e-14 | 72.8 |
| MS.gene50585.t1 | AT5G49520 | 56.140 | 57 | 24 | 1 | 291 | 347 | 222 | 277 | 2.86e-17 | 82.8 |
| MS.gene50585.t1 | AT4G01720 | 55.738 | 61 | 27 | 0 | 291 | 351 | 240 | 300 | 3.03e-17 | 83.2 |
| MS.gene50585.t1 | AT4G30935 | 56.140 | 57 | 24 | 1 | 291 | 347 | 332 | 387 | 3.67e-17 | 82.8 |
| MS.gene50585.t1 | AT5G15130 | 55.172 | 58 | 26 | 0 | 291 | 348 | 186 | 243 | 5.38e-17 | 82.4 |
| MS.gene50585.t1 | AT5G15130 | 55.172 | 58 | 26 | 0 | 291 | 348 | 228 | 285 | 5.87e-17 | 82.4 |
| MS.gene50585.t1 | AT4G31800 | 41.096 | 73 | 43 | 0 | 275 | 347 | 96 | 168 | 1.37e-16 | 79.0 |
| MS.gene50585.t1 | AT5G56270 | 49.351 | 77 | 35 | 2 | 274 | 347 | 468 | 543 | 1.72e-16 | 81.3 |
| MS.gene50585.t1 | AT5G56270 | 50.820 | 61 | 28 | 2 | 291 | 351 | 274 | 332 | 4.77e-11 | 64.7 |
| MS.gene50585.t1 | AT3G01080 | 47.436 | 78 | 40 | 1 | 270 | 347 | 286 | 362 | 1.97e-16 | 80.5 |
| MS.gene50585.t1 | AT3G01080 | 51.562 | 64 | 28 | 3 | 287 | 349 | 163 | 224 | 5.83e-13 | 70.1 |
| MS.gene50585.t1 | AT3G01080 | 47.436 | 78 | 40 | 1 | 270 | 347 | 324 | 400 | 1.99e-16 | 80.5 |
| MS.gene50585.t1 | AT3G01080 | 51.562 | 64 | 28 | 3 | 287 | 349 | 201 | 262 | 5.92e-13 | 70.1 |
| MS.gene50585.t1 | AT2G37260 | 43.137 | 102 | 52 | 2 | 246 | 347 | 230 | 325 | 2.20e-16 | 79.7 |
| MS.gene50585.t1 | AT2G37260 | 54.237 | 59 | 25 | 2 | 291 | 349 | 86 | 142 | 9.59e-13 | 68.9 |
| MS.gene50585.t1 | AT2G37260 | 43.137 | 102 | 52 | 2 | 246 | 347 | 228 | 323 | 2.29e-16 | 79.7 |
| MS.gene50585.t1 | AT2G37260 | 54.237 | 59 | 25 | 2 | 291 | 349 | 84 | 140 | 9.57e-13 | 68.9 |
| MS.gene50585.t1 | AT4G31800 | 41.096 | 73 | 43 | 0 | 275 | 347 | 161 | 233 | 2.29e-16 | 79.3 |
| MS.gene50585.t1 | AT2G40740 | 40.860 | 93 | 52 | 2 | 256 | 345 | 138 | 230 | 2.30e-16 | 79.0 |
| MS.gene50585.t1 | AT2G37260 | 43.137 | 102 | 52 | 2 | 246 | 347 | 310 | 405 | 3.24e-16 | 79.7 |
| MS.gene50585.t1 | AT2G37260 | 54.237 | 59 | 25 | 2 | 291 | 349 | 166 | 222 | 9.87e-13 | 69.3 |
| MS.gene50585.t1 | AT2G40740 | 40.860 | 93 | 52 | 2 | 256 | 345 | 147 | 239 | 3.29e-16 | 78.6 |
| MS.gene50585.t1 | AT4G39410 | 41.860 | 86 | 46 | 2 | 266 | 348 | 196 | 280 | 3.30e-16 | 78.6 |
| MS.gene50585.t1 | AT5G45260 | 46.237 | 93 | 38 | 4 | 266 | 353 | 1187 | 1272 | 3.57e-16 | 80.5 |
| MS.gene50585.t1 | AT5G43290 | 49.367 | 79 | 36 | 2 | 273 | 351 | 100 | 174 | 4.40e-16 | 77.8 |
| MS.gene50585.t1 | AT2G47260 | 40.964 | 83 | 48 | 1 | 265 | 347 | 149 | 230 | 8.06e-16 | 77.8 |
| MS.gene50585.t1 | AT5G46350 | 51.613 | 62 | 28 | 2 | 291 | 352 | 184 | 243 | 1.06e-15 | 77.4 |
| MS.gene50585.t1 | AT1G69310 | 41.176 | 85 | 49 | 1 | 266 | 350 | 123 | 206 | 1.19e-15 | 77.0 |
| MS.gene50585.t1 | AT1G69310 | 41.176 | 85 | 49 | 1 | 266 | 350 | 123 | 206 | 1.19e-15 | 77.0 |
| MS.gene50585.t1 | AT1G69310 | 41.176 | 85 | 49 | 1 | 266 | 350 | 123 | 206 | 1.19e-15 | 77.0 |
| MS.gene50585.t1 | AT4G26440 | 46.914 | 81 | 41 | 2 | 271 | 351 | 353 | 431 | 1.21e-15 | 78.6 |
| MS.gene50585.t1 | AT4G26440 | 51.562 | 64 | 28 | 3 | 289 | 351 | 176 | 237 | 1.79e-11 | 65.9 |
| MS.gene50585.t1 | AT3G62340 | 43.902 | 82 | 45 | 1 | 268 | 349 | 96 | 176 | 1.45e-15 | 76.3 |
| MS.gene50585.t1 | AT2G44745 | 41.667 | 84 | 45 | 2 | 267 | 347 | 119 | 201 | 1.54e-15 | 75.1 |
| MS.gene50585.t1 | AT1G80840 | 36.800 | 125 | 65 | 5 | 242 | 353 | 85 | 208 | 1.59e-15 | 76.6 |
| MS.gene50585.t1 | AT1G18860 | 54.386 | 57 | 26 | 0 | 291 | 347 | 240 | 296 | 1.82e-15 | 77.8 |
| MS.gene50585.t1 | AT1G55600 | 50.725 | 69 | 30 | 2 | 287 | 355 | 304 | 368 | 2.09e-15 | 77.8 |
| MS.gene50585.t1 | AT1G69810 | 46.988 | 83 | 35 | 2 | 266 | 347 | 187 | 261 | 3.93e-15 | 76.3 |
| MS.gene50585.t1 | AT1G69810 | 46.988 | 83 | 35 | 2 | 266 | 347 | 129 | 203 | 4.79e-15 | 75.5 |
| MS.gene50585.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 291 | 347 | 104 | 160 | 6.00e-15 | 73.9 |
| MS.gene50585.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 291 | 347 | 104 | 160 | 6.00e-15 | 73.9 |
| MS.gene50585.t1 | AT2G21900 | 56.140 | 57 | 24 | 1 | 291 | 347 | 110 | 165 | 6.22e-15 | 73.2 |
| MS.gene50585.t1 | AT5G41570 | 43.529 | 85 | 44 | 2 | 266 | 347 | 71 | 154 | 8.20e-15 | 72.4 |
| MS.gene50585.t1 | AT5G64810 | 49.180 | 61 | 30 | 1 | 287 | 347 | 107 | 166 | 1.18e-14 | 72.0 |
| MS.gene50585.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 291 | 347 | 126 | 182 | 1.22e-14 | 73.2 |
| MS.gene50585.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 291 | 347 | 147 | 203 | 1.44e-14 | 73.6 |
| MS.gene50585.t1 | AT1G64000 | 38.095 | 84 | 51 | 1 | 264 | 347 | 88 | 170 | 2.10e-14 | 71.6 |
| MS.gene50585.t1 | AT2G46130 | 50.000 | 62 | 30 | 1 | 286 | 347 | 26 | 86 | 2.25e-14 | 68.9 |
| MS.gene50585.t1 | AT2G30250 | 42.857 | 84 | 43 | 4 | 272 | 352 | 307 | 388 | 3.68e-14 | 73.6 |
| MS.gene50585.t1 | AT3G01970 | 47.619 | 63 | 32 | 1 | 286 | 348 | 61 | 122 | 9.05e-14 | 68.6 |
| MS.gene50585.t1 | AT3G01080 | 51.562 | 64 | 28 | 3 | 287 | 349 | 201 | 262 | 4.30e-13 | 69.7 |
| MS.gene50585.t1 | AT5G13080 | 45.161 | 62 | 33 | 1 | 286 | 347 | 63 | 123 | 7.66e-13 | 65.9 |
| MS.gene50585.t1 | AT4G11070 | 36.975 | 119 | 63 | 3 | 230 | 345 | 89 | 198 | 1.81e-12 | 67.8 |
| MS.gene50585.t1 | AT4G11070 | 36.975 | 119 | 63 | 3 | 230 | 345 | 57 | 166 | 1.87e-12 | 67.4 |
| MS.gene50585.t1 | AT4G23810 | 45.882 | 85 | 43 | 2 | 265 | 346 | 132 | 216 | 4.67e-12 | 66.6 |
| MS.gene50585.t1 | AT1G69310 | 39.080 | 87 | 45 | 3 | 267 | 350 | 121 | 202 | 1.90e-11 | 64.3 |
| MS.gene50585.t1 | AT4G12020 | 50.877 | 57 | 26 | 2 | 291 | 347 | 469 | 523 | 8.61e-11 | 64.3 |
| MS.gene50585.t1 | AT4G12020 | 50.877 | 57 | 26 | 2 | 291 | 347 | 469 | 523 | 8.61e-11 | 64.3 |
| MS.gene50585.t1 | AT1G66560 | 47.458 | 59 | 29 | 1 | 289 | 345 | 102 | 160 | 8.98e-11 | 62.0 |
| MS.gene50585.t1 | AT4G12020 | 50.877 | 57 | 26 | 2 | 291 | 347 | 469 | 523 | 9.35e-11 | 63.9 |
| MS.gene50585.t1 | AT4G12020 | 50.877 | 57 | 26 | 2 | 291 | 347 | 469 | 523 | 9.35e-11 | 63.9 |
| MS.gene50585.t1 | AT4G12020 | 50.877 | 57 | 26 | 2 | 291 | 347 | 469 | 523 | 9.59e-11 | 63.9 |
Find 79 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGAGAAAGTGGATTTCTT+AGG | 0.196128 | 1.2:+54027257 | None:intergenic |
| CATGCAGTTCATGCATTTGC+AGG | 0.256684 | 1.2:+54025913 | None:intergenic |
| TTCTCTTGGAAACCCTTCTT+TGG | 0.278708 | 1.2:-54027242 | MS.gene50585:CDS |
| AAAGTTGTGTCTTTGCTTCA+TGG | 0.278912 | 1.2:-54027454 | MS.gene50585:CDS |
| TAGTAGCCTTGTCAAAATTA+AGG | 0.303036 | 1.2:+54027026 | None:intergenic |
| TAGAGTGAAGAGATCAATTA+AGG | 0.339973 | 1.2:-54026682 | MS.gene50585:CDS |
| CAAAATTCAGTTCAGGAACT+TGG | 0.342737 | 1.2:-54027286 | MS.gene50585:CDS |
| GGAAGTTCCTTCCATTTGAT+TGG | 0.353546 | 1.2:-54026926 | MS.gene50585:CDS |
| TGTGTCTTTGCTTCATGGTT+TGG | 0.359375 | 1.2:-54027449 | MS.gene50585:CDS |
| GTTTGGATCATTCAAGAGTT+AGG | 0.362142 | 1.2:-54027432 | MS.gene50585:CDS |
| AAGAAAGCAGTTTGAGGATA+AGG | 0.371998 | 1.2:+54027385 | None:intergenic |
| CTAAGAAATCCACTTTCTCT+TGG | 0.374963 | 1.2:-54027256 | MS.gene50585:CDS |
| AGGAATTTAACTGTTGAAAC+TGG | 0.385192 | 1.2:-54027499 | MS.gene50585:CDS |
| GTGATTATGCTCGCCTTCAT+AGG | 0.392014 | 1.2:+54025954 | None:intergenic |
| CAAGGGATCAAGTTCATCAT+AGG | 0.420309 | 1.2:-54027519 | MS.gene50585:CDS |
| TTATGCCGCTGGTGTTCCTT+CGG | 0.429874 | 1.2:+54027050 | None:intergenic |
| TTTGAACTCAATTCCAAAGA+AGG | 0.431276 | 1.2:+54027229 | None:intergenic |
| CTATCCTCAAAATTCAGTTC+AGG | 0.434300 | 1.2:-54027293 | MS.gene50585:CDS |
| CACCAACAATGTCGTCTACT+AGG | 0.435790 | 1.2:-54026997 | MS.gene50585:CDS |
| CTTTGGAATTGAGTTCAAAC+GGG | 0.435936 | 1.2:-54027225 | MS.gene50585:CDS |
| AAGAGAAAGTGGATTTCTTA+GGG | 0.437226 | 1.2:+54027258 | None:intergenic |
| CTCTCAACATGCTTCCTAGC+AGG | 0.437995 | 1.2:+54026009 | None:intergenic |
| TAAGTATGTTGTCTCAATCA+AGG | 0.450290 | 1.2:-54027537 | MS.gene50585:CDS |
| TAGGTAACCATTAGCATAGT+AGG | 0.453570 | 1.2:+54025973 | None:intergenic |
| GGGTGAGGAGAGCCCTTGAT+AGG | 0.454162 | 1.2:+54026588 | None:intergenic |
| TGCAGGTTGTGTTGGTACCT+TGG | 0.458215 | 1.2:+54025930 | None:intergenic |
| AGAAAGCAGTTTGAGGATAA+GGG | 0.460093 | 1.2:+54027386 | None:intergenic |
| AGATCGGAGCTCCAATCAAA+TGG | 0.468483 | 1.2:+54026915 | None:intergenic |
| ATGCTAATGGTTACCTATGA+AGG | 0.471493 | 1.2:-54025967 | MS.gene50585:CDS |
| TTCCTCCATGAGTAATCATC+AGG | 0.472648 | 1.2:+54026624 | None:intergenic |
| GCATGAGAGGCTGCCCTGCT+AGG | 0.472837 | 1.2:-54026023 | MS.gene50585:CDS |
| TCTTTGGAATTGAGTTCAAA+CGG | 0.478409 | 1.2:-54027226 | MS.gene50585:CDS |
| GGATGAGCCTACTATGCTAA+TGG | 0.481224 | 1.2:-54025980 | MS.gene50585:CDS |
| TTTGTTGCTGCAGCTGCTGT+TGG | 0.487273 | 1.2:+54027125 | None:intergenic |
| AAAATTAAGGCTTATGCCGC+TGG | 0.488025 | 1.2:+54027039 | None:intergenic |
| GAAGGGTTTCCAAGAGAAAG+TGG | 0.494949 | 1.2:+54027247 | None:intergenic |
| GCAAGCTTGTTGCTGATAGC+AGG | 0.495556 | 1.2:+54026657 | None:intergenic |
| GATTACTCATGGAGGAAGTA+CGG | 0.498681 | 1.2:-54026618 | MS.gene50585:CDS |
| TTGAACTCAATTCCAAAGAA+GGG | 0.509941 | 1.2:+54027230 | None:intergenic |
| GTACGGGCAGAAGCCTATCA+AGG | 0.510514 | 1.2:-54026601 | MS.gene50585:CDS |
| CATGCATTTGCAGGTTGTGT+TGG | 0.511678 | 1.2:+54025922 | None:intergenic |
| GACCTAGTAGACGACATTGT+TGG | 0.517470 | 1.2:+54026995 | None:intergenic |
| AAACTGGTGAAGCTGTGAAT+AGG | 0.523498 | 1.2:-54027483 | MS.gene50585:CDS |
| ATTACCTCTTCTTTGAGCAA+TGG | 0.528866 | 1.2:+54026807 | None:intergenic |
| TTGTCTAAGAAAGCAGTTTG+AGG | 0.538734 | 1.2:+54027379 | None:intergenic |
| TCCCTCCTGATGATTACTCA+TGG | 0.545497 | 1.2:-54026629 | MS.gene50585:CDS |
| GGAAGCGTGGCTAACGTGGA+TGG | 0.552072 | 1.2:-54026947 | MS.gene50585:CDS |
| AATGCCATTGCTCAAAGAAG+AGG | 0.554797 | 1.2:-54026811 | MS.gene50585:intron |
| ATTTCCTCCTTGAGCATAGA+CGG | 0.557646 | 1.2:-54026968 | MS.gene50585:CDS |
| ATTACTCATGGAGGAAGTAC+GGG | 0.557772 | 1.2:-54026617 | MS.gene50585:CDS |
| GAATTCTGATCTGAAGAGAT+CGG | 0.560341 | 1.2:+54026899 | None:intergenic |
| CACGCTTCCGTCTATGCTCA+AGG | 0.561562 | 1.2:+54026961 | None:intergenic |
| AGACGGAAGCGTGGCTAACG+TGG | 0.565434 | 1.2:-54026951 | MS.gene50585:CDS |
| TCTCAACATGCTTCCTAGCA+GGG | 0.575418 | 1.2:+54026010 | None:intergenic |
| TCAAGGGCTCTCCTCACCCT+AGG | 0.577561 | 1.2:-54026584 | MS.gene50585:intron |
| TATAAGTGCAGCAGCATGAG+AGG | 0.580000 | 1.2:-54026036 | MS.gene50585:CDS |
| AAGTATGTTGTCTCAATCAA+GGG | 0.580385 | 1.2:-54027536 | MS.gene50585:CDS |
| ATCAGAATTCACAGCACAAG+AGG | 0.581042 | 1.2:-54026886 | MS.gene50585:CDS |
| TGCTATCAGCAACAAGCTTG+CGG | 0.581834 | 1.2:-54026655 | MS.gene50585:CDS |
| CGGAGCTCCAATCAAATGGA+AGG | 0.586112 | 1.2:+54026919 | None:intergenic |
| GAAGCATGTTGAGAGGTGCT+TGG | 0.586233 | 1.2:-54026001 | MS.gene50585:CDS |
| GCTTGTTGAGCAAGGTGAAG+CGG | 0.587298 | 1.2:+54027196 | None:intergenic |
| TGTTCTGCTAGAGGCGATGA+GGG | 0.590850 | 1.2:-54026860 | MS.gene50585:CDS |
| ATGTTCTGCTAGAGGCGATG+AGG | 0.604159 | 1.2:-54026861 | MS.gene50585:CDS |
| CTCCATGAGTAATCATCAGG+AGG | 0.604331 | 1.2:+54026627 | None:intergenic |
| AACAGCAGCTGCAGCAACAA+AGG | 0.622186 | 1.2:-54027123 | MS.gene50585:CDS |
| AAGCTGAAATGATGTTCCGA+AGG | 0.624862 | 1.2:-54027066 | MS.gene50585:CDS |
| AAGAGGAAATGTTCTGCTAG+AGG | 0.627788 | 1.2:-54026869 | MS.gene50585:CDS |
| TTGATGCAGCTTGTTGAGCA+AGG | 0.628338 | 1.2:+54027188 | None:intergenic |
| TCCATGAGTAATCATCAGGA+GGG | 0.631195 | 1.2:+54026628 | None:intergenic |
| GGTTGGACATACCTAGGGTG+AGG | 0.641458 | 1.2:+54026573 | None:intergenic |
| TACGGGCAGAAGCCTATCAA+GGG | 0.654538 | 1.2:-54026600 | MS.gene50585:CDS |
| CTTGAGCATAGACGGAAGCG+TGG | 0.674043 | 1.2:-54026960 | MS.gene50585:CDS |
| AGGCGAGCATAATCACGCCA+AGG | 0.679418 | 1.2:-54025947 | MS.gene50585:CDS |
| CTCCTGATGATTACTCATGG+AGG | 0.692245 | 1.2:-54026626 | MS.gene50585:CDS |
| TGGTGATGATGCTGTTGCTG+CGG | 0.703851 | 1.2:+54027145 | None:intergenic |
| CTGCTAGGAAGCATGTTGAG+AGG | 0.707257 | 1.2:-54026008 | MS.gene50585:CDS |
| ATGTTCCGAAGGAACACCAG+CGG | 0.729358 | 1.2:-54027055 | MS.gene50585:CDS |
| GCTTCCGTCTATGCTCAAGG+AGG | 0.768540 | 1.2:+54026964 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATATCATATTACAA+TGG | + | chr1.2:54026786-54026805 | None:intergenic | 10.0% |
| !!! | ATGTTCAAGTTAAAAAAAAA+GGG | + | chr1.2:54027288-54027307 | None:intergenic | 15.0% |
| !! | TGTAATGAAAATTACAAACA+TGG | + | chr1.2:54027232-54027251 | None:intergenic | 20.0% |
| !! | TTAAATCTCAAATAGCAAAA+CGG | + | chr1.2:54026964-54026983 | None:intergenic | 20.0% |
| !!! | AATTTTATTGATTCGATTCA+AGG | - | chr1.2:54026982-54027001 | MS.gene50585:CDS | 20.0% |
| !!! | CATGTTCAAGTTAAAAAAAA+AGG | + | chr1.2:54027289-54027308 | None:intergenic | 20.0% |
| !!! | GTTAATTTCTGTTACTTTAA+AGG | - | chr1.2:54026751-54026770 | MS.gene50585:intron | 20.0% |
| ! | AAAATTACAAACATGGACAA+AGG | + | chr1.2:54027225-54027244 | None:intergenic | 25.0% |
| ! | AAAATTATTTAAATCCCCAC+AGG | + | chr1.2:54027152-54027171 | None:intergenic | 25.0% |
| ! | CATTATTGTCAATCAAATGA+AGG | - | chr1.2:54027372-54027391 | MS.gene50585:CDS | 25.0% |
| ! | TGACAATAATGTGACAATAA+TGG | + | chr1.2:54027363-54027382 | None:intergenic | 25.0% |
| ! | TGGATATGTAATATGTTGAT+TGG | - | chr1.2:54027182-54027201 | MS.gene50585:CDS | 25.0% |
| !! | ATGATGTTTCTTTTGCAATT+TGG | + | chr1.2:54026161-54026180 | None:intergenic | 25.0% |
| !! | TCTAATGGTTGATACATTAA+TGG | - | chr1.2:54026729-54026748 | MS.gene50585:intron | 25.0% |
| !! | TGATGTTTCTTTTGCAATTT+GGG | + | chr1.2:54026160-54026179 | None:intergenic | 25.0% |
| !! | TGTGGGGATTTAAATAATTT+TGG | - | chr1.2:54027151-54027170 | MS.gene50585:CDS | 25.0% |
| !! | TTGAGTAAAGTGAACATTTT+TGG | + | chr1.2:54026195-54026214 | None:intergenic | 25.0% |
| !!! | AAATAATTTTGGTCTATGTG+TGG | - | chr1.2:54027162-54027181 | MS.gene50585:CDS | 25.0% |
| AAGTATGTTGTCTCAATCAA+GGG | - | chr1.2:54025977-54025996 | MS.gene50585:CDS | 30.0% | |
| AGGAATTTAACTGTTGAAAC+TGG | - | chr1.2:54026014-54026033 | MS.gene50585:CDS | 30.0% | |
| CAAAGAAGAGGTAATTCTAA+TGG | - | chr1.2:54026714-54026733 | MS.gene50585:intron | 30.0% | |
| GAGCATCAAAATTGCAAAAT+CGG | + | chr1.2:54027321-54027340 | None:intergenic | 30.0% | |
| TAAGTATGTTGTCTCAATCA+AGG | - | chr1.2:54025976-54025995 | MS.gene50585:CDS | 30.0% | |
| TAGAGTGAAGAGATCAATTA+AGG | - | chr1.2:54026831-54026850 | MS.gene50585:CDS | 30.0% | |
| TTGAACTCAATTCCAAAGAA+GGG | + | chr1.2:54026286-54026305 | None:intergenic | 30.0% | |
| TTTGAACTCAATTCCAAAGA+AGG | + | chr1.2:54026287-54026306 | None:intergenic | 30.0% | |
| ! | AAGAGAAAGTGGATTTCTTA+GGG | + | chr1.2:54026258-54026277 | None:intergenic | 30.0% |
| !! | AACTATTTTGTTATGCTGCT+TGG | - | chr1.2:54027057-54027076 | MS.gene50585:CDS | 30.0% |
| !! | CATAAGCCTTAATTTTGACA+AGG | - | chr1.2:54026481-54026500 | MS.gene50585:intron | 30.0% |
| !! | GTCTTGATTTTGTTTCTTCA+GGG | - | chr1.2:54027449-54027468 | MS.gene50585:CDS | 30.0% |
| !! | TAGTAGCCTTGTCAAAATTA+AGG | + | chr1.2:54026490-54026509 | None:intergenic | 30.0% |
| !! | TCTTGATTTTGTTTCTTCAG+GGG | - | chr1.2:54027450-54027469 | MS.gene50585:CDS | 30.0% |
| !! | TCTTTGGAATTGAGTTCAAA+CGG | - | chr1.2:54026287-54026306 | MS.gene50585:intron | 30.0% |
| !! | TGTCTTGATTTTGTTTCTTC+AGG | - | chr1.2:54027448-54027467 | MS.gene50585:CDS | 30.0% |
| !! | TTTTGCAATTTTGATGCTCT+AGG | - | chr1.2:54027322-54027341 | MS.gene50585:CDS | 30.0% |
| AAAAAGGGCTATCGAACATA+TGG | + | chr1.2:54027273-54027292 | None:intergenic | 35.0% | |
| AAAGTTGTGTCTTTGCTTCA+TGG | - | chr1.2:54026059-54026078 | MS.gene50585:intron | 35.0% | |
| AAGAAAGCAGTTTGAGGATA+AGG | + | chr1.2:54026131-54026150 | None:intergenic | 35.0% | |
| AGAAAGCAGTTTGAGGATAA+GGG | + | chr1.2:54026130-54026149 | None:intergenic | 35.0% | |
| ATCTCAAATAGCAAAACGGT+TGG | + | chr1.2:54026960-54026979 | None:intergenic | 35.0% | |
| ATGCTAATGGTTACCTATGA+AGG | - | chr1.2:54027546-54027565 | MS.gene50585:CDS | 35.0% | |
| ATTACCTCTTCTTTGAGCAA+TGG | + | chr1.2:54026709-54026728 | None:intergenic | 35.0% | |
| CAAAATTCAGTTCAGGAACT+TGG | - | chr1.2:54026227-54026246 | MS.gene50585:intron | 35.0% | |
| CTAAGAAATCCACTTTCTCT+TGG | - | chr1.2:54026257-54026276 | MS.gene50585:intron | 35.0% | |
| CTATCCTCAAAATTCAGTTC+AGG | - | chr1.2:54026220-54026239 | MS.gene50585:intron | 35.0% | |
| GAATTCTGATCTGAAGAGAT+CGG | + | chr1.2:54026617-54026636 | None:intergenic | 35.0% | |
| GTTTGGATCATTCAAGAGTT+AGG | - | chr1.2:54026081-54026100 | MS.gene50585:intron | 35.0% | |
| TAACTTTGTGTGTTCTTGAC+AGG | - | chr1.2:54026803-54026822 | MS.gene50585:intron | 35.0% | |
| TAGGTAACCATTAGCATAGT+AGG | + | chr1.2:54027543-54027562 | None:intergenic | 35.0% | |
| TTGTCTAAGAAAGCAGTTTG+AGG | + | chr1.2:54026137-54026156 | None:intergenic | 35.0% | |
| ! | AGTTCCTGAACTGAATTTTG+AGG | + | chr1.2:54026227-54026246 | None:intergenic | 35.0% |
| ! | CAAGAGAAAGTGGATTTCTT+AGG | + | chr1.2:54026259-54026278 | None:intergenic | 35.0% |
| !! | CTGAACTGAATTTTGAGGAT+AGG | + | chr1.2:54026222-54026241 | None:intergenic | 35.0% |
| !! | CTTGATTTTGTTTCTTCAGG+GGG | - | chr1.2:54027451-54027470 | MS.gene50585:CDS | 35.0% |
| !! | CTTTGGAATTGAGTTCAAAC+GGG | - | chr1.2:54026288-54026307 | MS.gene50585:intron | 35.0% |
| !!! | AGTGAACATTTTTGGTGTGA+TGG | + | chr1.2:54026187-54026206 | None:intergenic | 35.0% |
| AAAACGGTTGGACATACCTA+GGG | + | chr1.2:54026948-54026967 | None:intergenic | 40.0% | |
| AAAATTAAGGCTTATGCCGC+TGG | + | chr1.2:54026477-54026496 | None:intergenic | 40.0% | |
| AAACTGGTGAAGCTGTGAAT+AGG | - | chr1.2:54026030-54026049 | MS.gene50585:CDS | 40.0% | |
| AAGAGGAAATGTTCTGCTAG+AGG | - | chr1.2:54026644-54026663 | MS.gene50585:CDS | 40.0% | |
| AAGCTGAAATGATGTTCCGA+AGG | - | chr1.2:54026447-54026466 | MS.gene50585:intron | 40.0% | |
| AATGCCATTGCTCAAAGAAG+AGG | - | chr1.2:54026702-54026721 | MS.gene50585:intron | 40.0% | |
| ATCAGAATTCACAGCACAAG+AGG | - | chr1.2:54026627-54026646 | MS.gene50585:CDS | 40.0% | |
| ATTTCCTCCTTGAGCATAGA+CGG | - | chr1.2:54026545-54026564 | MS.gene50585:intron | 40.0% | |
| CAAGGGATCAAGTTCATCAT+AGG | - | chr1.2:54025994-54026013 | MS.gene50585:CDS | 40.0% | |
| GATTACTCATGGAGGAAGTA+CGG | - | chr1.2:54026895-54026914 | MS.gene50585:CDS | 40.0% | |
| GGAAGTTCCTTCCATTTGAT+TGG | - | chr1.2:54026587-54026606 | MS.gene50585:CDS | 40.0% | |
| TCCATGAGTAATCATCAGGA+GGG | + | chr1.2:54026888-54026907 | None:intergenic | 40.0% | |
| TGTGTCTTTGCTTCATGGTT+TGG | - | chr1.2:54026064-54026083 | MS.gene50585:intron | 40.0% | |
| TTCCTCCATGAGTAATCATC+AGG | + | chr1.2:54026892-54026911 | None:intergenic | 40.0% | |
| TTCTCTTGGAAACCCTTCTT+TGG | - | chr1.2:54026271-54026290 | MS.gene50585:intron | 40.0% | |
| ! | ATTACTCATGGAGGAAGTAC+GGG | - | chr1.2:54026896-54026915 | MS.gene50585:CDS | 40.0% |
| ! | TGATTGATGTACTAGCCTGT+GGG | - | chr1.2:54027134-54027153 | MS.gene50585:CDS | 40.0% |
| AGATCGGAGCTCCAATCAAA+TGG | + | chr1.2:54026601-54026620 | None:intergenic | 45.0% | |
| CAAAACGGTTGGACATACCT+AGG | + | chr1.2:54026949-54026968 | None:intergenic | 45.0% | |
| CACCAACAATGTCGTCTACT+AGG | - | chr1.2:54026516-54026535 | MS.gene50585:intron | 45.0% | |
| CATGCATTTGCAGGTTGTGT+TGG | + | chr1.2:54027594-54027613 | None:intergenic | 45.0% | |
| CTCCATGAGTAATCATCAGG+AGG | + | chr1.2:54026889-54026908 | None:intergenic | 45.0% | |
| CTCCTGATGATTACTCATGG+AGG | - | chr1.2:54026887-54026906 | MS.gene50585:CDS | 45.0% | |
| GAAGGGTTTCCAAGAGAAAG+TGG | + | chr1.2:54026269-54026288 | None:intergenic | 45.0% | |
| GACCTAGTAGACGACATTGT+TGG | + | chr1.2:54026521-54026540 | None:intergenic | 45.0% | |
| GGATGAGCCTACTATGCTAA+TGG | - | chr1.2:54027533-54027552 | MS.gene50585:CDS | 45.0% | |
| GTGATTATGCTCGCCTTCAT+AGG | + | chr1.2:54027562-54027581 | None:intergenic | 45.0% | |
| TATAAGTGCAGCAGCATGAG+AGG | - | chr1.2:54027477-54027496 | MS.gene50585:CDS | 45.0% | |
| TCCCTCCTGATGATTACTCA+TGG | - | chr1.2:54026884-54026903 | MS.gene50585:CDS | 45.0% | |
| TCTCAACATGCTTCCTAGCA+GGG | + | chr1.2:54027506-54027525 | None:intergenic | 45.0% | |
| TGCTATCAGCAACAAGCTTG+CGG | - | chr1.2:54026858-54026877 | MS.gene50585:CDS | 45.0% | |
| ! | CTGATTGATGTACTAGCCTG+TGG | - | chr1.2:54027133-54027152 | MS.gene50585:CDS | 45.0% |
| ! | GATTGATGTACTAGCCTGTG+GGG | - | chr1.2:54027135-54027154 | MS.gene50585:CDS | 45.0% |
| !! | TTGATGCAGCTTGTTGAGCA+AGG | + | chr1.2:54026328-54026347 | None:intergenic | 45.0% |
| AACAGCAGCTGCAGCAACAA+AGG | - | chr1.2:54026390-54026409 | MS.gene50585:intron | 50.0% | |
| ATGTTCCGAAGGAACACCAG+CGG | - | chr1.2:54026458-54026477 | MS.gene50585:intron | 50.0% | |
| ATGTTCTGCTAGAGGCGATG+AGG | - | chr1.2:54026652-54026671 | MS.gene50585:CDS | 50.0% | |
| CGGAGCTCCAATCAAATGGA+AGG | + | chr1.2:54026597-54026616 | None:intergenic | 50.0% | |
| CTCTCAACATGCTTCCTAGC+AGG | + | chr1.2:54027507-54027526 | None:intergenic | 50.0% | |
| TACGGGCAGAAGCCTATCAA+GGG | - | chr1.2:54026913-54026932 | MS.gene50585:CDS | 50.0% | |
| TGTTCTGCTAGAGGCGATGA+GGG | - | chr1.2:54026653-54026672 | MS.gene50585:CDS | 50.0% | |
| TTATGCCGCTGGTGTTCCTT+CGG | + | chr1.2:54026466-54026485 | None:intergenic | 50.0% | |
| TTTGTTGCTGCAGCTGCTGT+TGG | + | chr1.2:54026391-54026410 | None:intergenic | 50.0% | |
| ! | CTGCTAGGAAGCATGTTGAG+AGG | - | chr1.2:54027505-54027524 | MS.gene50585:CDS | 50.0% |
| ! | GCTTGTTGAGCAAGGTGAAG+CGG | + | chr1.2:54026320-54026339 | None:intergenic | 50.0% |
| ! | TGCAGGTTGTGTTGGTACCT+TGG | + | chr1.2:54027586-54027605 | None:intergenic | 50.0% |
| ! | TGGTGATGATGCTGTTGCTG+CGG | + | chr1.2:54026371-54026390 | None:intergenic | 50.0% |
| !! | GAAGCATGTTGAGAGGTGCT+TGG | - | chr1.2:54027512-54027531 | MS.gene50585:CDS | 50.0% |
| !! | GCAAGCTTGTTGCTGATAGC+AGG | + | chr1.2:54026859-54026878 | None:intergenic | 50.0% |
| AGGCGAGCATAATCACGCCA+AGG | - | chr1.2:54027566-54027585 | MS.gene50585:CDS | 55.0% | |
| CACGCTTCCGTCTATGCTCA+AGG | + | chr1.2:54026555-54026574 | None:intergenic | 55.0% | |
| CTTGAGCATAGACGGAAGCG+TGG | - | chr1.2:54026553-54026572 | MS.gene50585:intron | 55.0% | |
| GCTTCCGTCTATGCTCAAGG+AGG | + | chr1.2:54026552-54026571 | None:intergenic | 55.0% | |
| GGTTGGACATACCTAGGGTG+AGG | + | chr1.2:54026943-54026962 | None:intergenic | 55.0% | |
| GTACGGGCAGAAGCCTATCA+AGG | - | chr1.2:54026912-54026931 | MS.gene50585:CDS | 55.0% | |
| GGGTGAGGAGAGCCCTTGAT+AGG | + | chr1.2:54026928-54026947 | None:intergenic | 60.0% | |
| TCAAGGGCTCTCCTCACCCT+AGG | - | chr1.2:54026929-54026948 | MS.gene50585:CDS | 60.0% | |
| ! | AGACGGAAGCGTGGCTAACG+TGG | - | chr1.2:54026562-54026581 | MS.gene50585:intron | 60.0% |
| ! | GGAAGCGTGGCTAACGTGGA+TGG | - | chr1.2:54026566-54026585 | MS.gene50585:intron | 60.0% |
| GCATGAGAGGCTGCCCTGCT+AGG | - | chr1.2:54027490-54027509 | MS.gene50585:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 54025921 | 54027614 | 54025921 | ID=MS.gene50585 |
| chr1.2 | mRNA | 54025921 | 54027614 | 54025921 | ID=MS.gene50585.t1;Parent=MS.gene50585 |
| chr1.2 | exon | 54026812 | 54027614 | 54026812 | ID=MS.gene50585.t1.exon1;Parent=MS.gene50585.t1 |
| chr1.2 | CDS | 54026812 | 54027614 | 54026812 | ID=cds.MS.gene50585.t1;Parent=MS.gene50585.t1 |
| chr1.2 | exon | 54026585 | 54026710 | 54026585 | ID=MS.gene50585.t1.exon2;Parent=MS.gene50585.t1 |
| chr1.2 | CDS | 54026585 | 54026710 | 54026585 | ID=cds.MS.gene50585.t1;Parent=MS.gene50585.t1 |
| chr1.2 | exon | 54025921 | 54026065 | 54025921 | ID=MS.gene50585.t1.exon3;Parent=MS.gene50585.t1 |
| chr1.2 | CDS | 54025921 | 54026065 | 54025921 | ID=cds.MS.gene50585.t1;Parent=MS.gene50585.t1 |
| Gene Sequence |
| Protein sequence |
