Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50646.t1 | XP_013468478.1 | 95.2 | 726 | 34 | 1 | 1 | 726 | 1 | 725 | 1.20E-277 | 965.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50646.t1 | Q8GWV5 | 52.7 | 768 | 306 | 10 | 7 | 726 | 2 | 760 | 3.0e-115 | 417.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50646.t1 | A0A072VWP5 | 95.2 | 726 | 34 | 1 | 1 | 726 | 1 | 725 | 8.8e-278 | 965.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055465 | MS.gene50646 | 0.829301 | 5.56E-55 | -1.69E-46 |
MS.gene055467 | MS.gene50646 | 0.800282 | 1.55E-48 | -1.69E-46 |
MS.gene055469 | MS.gene50646 | 0.805115 | 1.56E-49 | -1.69E-46 |
MS.gene058087 | MS.gene50646 | 0.837112 | 6.30E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50646.t1 | MTR_1g069845 | 95.317 | 726 | 33 | 1 | 1 | 726 | 1 | 725 | 0.0 | 1360 |
MS.gene50646.t1 | MTR_1g069845 | 95.297 | 723 | 33 | 1 | 4 | 726 | 8 | 729 | 0.0 | 1353 |
MS.gene50646.t1 | MTR_1g069845 | 94.910 | 609 | 30 | 1 | 118 | 726 | 1 | 608 | 0.0 | 1116 |
MS.gene50646.t1 | MTR_7g097020 | 66.796 | 774 | 202 | 6 | 1 | 726 | 1 | 767 | 0.0 | 946 |
MS.gene50646.t1 | MTR_3g466220 | 67.742 | 279 | 90 | 0 | 438 | 716 | 530 | 808 | 5.60e-111 | 355 |
MS.gene50646.t1 | MTR_3g466220 | 41.045 | 268 | 158 | 0 | 45 | 312 | 16 | 283 | 1.71e-57 | 210 |
MS.gene50646.t1 | MTR_3g466220 | 67.742 | 279 | 90 | 0 | 438 | 716 | 551 | 829 | 7.14e-111 | 355 |
MS.gene50646.t1 | MTR_3g466220 | 39.130 | 299 | 182 | 0 | 14 | 312 | 6 | 304 | 2.73e-59 | 215 |
MS.gene50646.t1 | MTR_1g018180 | 53.237 | 278 | 129 | 1 | 440 | 716 | 61 | 338 | 4.66e-85 | 273 |
MS.gene50646.t1 | MTR_3g103050 | 47.468 | 316 | 159 | 3 | 414 | 724 | 27 | 340 | 1.33e-82 | 266 |
MS.gene50646.t1 | MTR_2g026130 | 52.500 | 280 | 132 | 1 | 444 | 722 | 179 | 458 | 2.21e-79 | 261 |
MS.gene50646.t1 | MTR_4g485520 | 46.545 | 275 | 146 | 1 | 440 | 713 | 205 | 479 | 9.22e-70 | 236 |
MS.gene50646.t1 | MTR_4g485520 | 31.579 | 380 | 226 | 10 | 241 | 611 | 105 | 459 | 5.89e-39 | 151 |
MS.gene50646.t1 | MTR_4g063800 | 46.263 | 281 | 150 | 1 | 438 | 717 | 351 | 631 | 1.37e-69 | 241 |
MS.gene50646.t1 | MTR_4g063800 | 25.268 | 653 | 395 | 17 | 31 | 634 | 23 | 631 | 7.12e-44 | 168 |
MS.gene50646.t1 | MTR_4g485520 | 46.545 | 275 | 146 | 1 | 440 | 713 | 373 | 647 | 2.30e-68 | 237 |
MS.gene50646.t1 | MTR_4g485520 | 31.579 | 380 | 226 | 10 | 241 | 611 | 273 | 627 | 4.36e-38 | 151 |
MS.gene50646.t1 | MTR_1g094215 | 49.077 | 271 | 137 | 1 | 440 | 709 | 162 | 432 | 3.54e-64 | 220 |
MS.gene50646.t1 | MTR_1g094215 | 31.285 | 358 | 205 | 8 | 241 | 587 | 64 | 391 | 8.80e-34 | 135 |
MS.gene50646.t1 | MTR_7g078330 | 48.327 | 269 | 136 | 3 | 443 | 709 | 370 | 637 | 4.62e-63 | 223 |
MS.gene50646.t1 | MTR_1g094215 | 49.077 | 271 | 137 | 1 | 440 | 709 | 345 | 615 | 1.23e-62 | 221 |
MS.gene50646.t1 | MTR_1g094215 | 26.544 | 599 | 376 | 14 | 14 | 587 | 15 | 574 | 6.13e-35 | 141 |
MS.gene50646.t1 | MTR_7g059405 | 43.110 | 283 | 157 | 2 | 427 | 709 | 351 | 629 | 1.10e-61 | 218 |
MS.gene50646.t1 | MTR_7g059405 | 25.934 | 482 | 277 | 14 | 172 | 591 | 171 | 634 | 1.50e-26 | 115 |
MS.gene50646.t1 | MTR_8g080280 | 32.787 | 488 | 257 | 14 | 242 | 716 | 283 | 712 | 4.19e-54 | 199 |
MS.gene50646.t1 | MTR_5g083030 | 39.935 | 308 | 179 | 5 | 408 | 709 | 373 | 680 | 5.96e-53 | 195 |
MS.gene50646.t1 | MTR_2g018010 | 41.577 | 279 | 156 | 7 | 441 | 713 | 397 | 674 | 3.02e-42 | 164 |
MS.gene50646.t1 | MTR_5g020570 | 28.629 | 496 | 277 | 14 | 242 | 716 | 289 | 728 | 2.48e-40 | 159 |
MS.gene50646.t1 | MTR_5g020570 | 28.629 | 496 | 277 | 14 | 242 | 716 | 274 | 713 | 3.66e-40 | 158 |
MS.gene50646.t1 | MTR_5g069340 | 37.770 | 278 | 167 | 4 | 443 | 714 | 37 | 314 | 1.88e-38 | 146 |
MS.gene50646.t1 | MTR_3g085610 | 30.584 | 497 | 272 | 16 | 236 | 717 | 273 | 711 | 1.39e-37 | 150 |
MS.gene50646.t1 | MTR_8g077205 | 27.122 | 483 | 293 | 11 | 242 | 714 | 164 | 597 | 4.58e-37 | 148 |
MS.gene50646.t1 | MTR_8g077205 | 27.122 | 483 | 293 | 11 | 242 | 714 | 276 | 709 | 5.09e-37 | 149 |
MS.gene50646.t1 | MTR_7g053260 | 33.898 | 295 | 183 | 8 | 426 | 712 | 159 | 449 | 5.65e-35 | 139 |
MS.gene50646.t1 | MTR_7g053260 | 25.296 | 423 | 260 | 12 | 210 | 589 | 40 | 449 | 1.08e-22 | 102 |
MS.gene50646.t1 | MTR_7g116600 | 38.433 | 268 | 154 | 6 | 451 | 709 | 182 | 447 | 1.13e-33 | 135 |
MS.gene50646.t1 | MTR_7g116600 | 40.870 | 115 | 54 | 2 | 210 | 310 | 33 | 147 | 1.23e-22 | 102 |
MS.gene50646.t1 | MTR_5g079550 | 32.990 | 291 | 185 | 6 | 431 | 714 | 11 | 298 | 1.21e-31 | 127 |
MS.gene50646.t1 | MTR_3g078160 | 32.609 | 276 | 176 | 6 | 453 | 720 | 391 | 664 | 5.64e-31 | 129 |
MS.gene50646.t1 | MTR_3g078160 | 32.609 | 276 | 176 | 6 | 453 | 720 | 391 | 664 | 6.80e-31 | 129 |
MS.gene50646.t1 | MTR_3g078340 | 31.387 | 274 | 184 | 2 | 443 | 713 | 214 | 486 | 2.19e-29 | 123 |
MS.gene50646.t1 | MTR_4g107010 | 32.727 | 275 | 177 | 5 | 455 | 721 | 398 | 672 | 8.49e-29 | 123 |
MS.gene50646.t1 | MTR_4g107010 | 24.931 | 361 | 229 | 9 | 242 | 586 | 281 | 615 | 6.38e-20 | 95.1 |
MS.gene50646.t1 | MTR_6g004790 | 33.217 | 286 | 171 | 9 | 442 | 714 | 4 | 282 | 6.16e-28 | 115 |
MS.gene50646.t1 | MTR_3g067685 | 34.028 | 288 | 180 | 6 | 433 | 713 | 34 | 318 | 8.95e-26 | 110 |
MS.gene50646.t1 | MTR_6g008170 | 28.889 | 270 | 188 | 2 | 443 | 709 | 241 | 509 | 1.39e-25 | 112 |
MS.gene50646.t1 | MTR_3g106140 | 30.822 | 292 | 186 | 7 | 434 | 713 | 107 | 394 | 1.93e-24 | 108 |
MS.gene50646.t1 | MTR_1g014420 | 32.632 | 285 | 178 | 8 | 442 | 713 | 130 | 413 | 2.90e-24 | 107 |
MS.gene50646.t1 | MTR_5g034440 | 29.167 | 360 | 221 | 12 | 245 | 591 | 284 | 622 | 2.02e-22 | 102 |
MS.gene50646.t1 | MTR_5g034440 | 32.609 | 276 | 177 | 5 | 443 | 709 | 386 | 661 | 5.05e-19 | 92.0 |
MS.gene50646.t1 | MTR_1g079450 | 35.606 | 264 | 160 | 5 | 458 | 712 | 174 | 436 | 5.33e-22 | 100 |
MS.gene50646.t1 | MTR_1g079450 | 25.792 | 442 | 237 | 12 | 214 | 596 | 34 | 443 | 5.48e-22 | 100 |
MS.gene50646.t1 | MTR_4g028960 | 57.971 | 69 | 29 | 0 | 242 | 310 | 281 | 349 | 9.71e-22 | 100 |
MS.gene50646.t1 | MTR_4g028960 | 31.803 | 305 | 189 | 10 | 434 | 726 | 378 | 675 | 3.40e-19 | 92.8 |
MS.gene50646.t1 | MTR_4g085720 | 52.703 | 74 | 35 | 0 | 238 | 311 | 11 | 84 | 8.87e-21 | 95.9 |
MS.gene50646.t1 | MTR_4g091880 | 34.010 | 197 | 124 | 5 | 521 | 714 | 147 | 340 | 2.42e-20 | 93.6 |
MS.gene50646.t1 | MTR_4g091880 | 47.059 | 68 | 35 | 1 | 241 | 307 | 5 | 72 | 9.85e-16 | 79.7 |
MS.gene50646.t1 | MTR_4g091880 | 34.010 | 197 | 124 | 5 | 521 | 714 | 175 | 368 | 3.61e-20 | 93.6 |
MS.gene50646.t1 | MTR_4g091880 | 46.377 | 69 | 36 | 1 | 240 | 307 | 4 | 72 | 1.07e-15 | 80.1 |
MS.gene50646.t1 | MTR_3g078160 | 25.857 | 321 | 179 | 8 | 242 | 560 | 276 | 539 | 8.51e-20 | 94.0 |
MS.gene50646.t1 | MTR_3g078160 | 37.162 | 148 | 89 | 3 | 453 | 598 | 391 | 536 | 1.35e-19 | 93.6 |
MS.gene50646.t1 | MTR_1g093965 | 59.322 | 59 | 24 | 0 | 254 | 312 | 1 | 59 | 1.08e-19 | 88.2 |
MS.gene50646.t1 | MTR_1g093965 | 50.000 | 68 | 33 | 1 | 575 | 641 | 128 | 195 | 5.38e-12 | 65.9 |
MS.gene50646.t1 | MTR_8g032570 | 29.365 | 252 | 165 | 7 | 480 | 723 | 261 | 507 | 6.46e-19 | 91.7 |
MS.gene50646.t1 | MTR_8g032570 | 29.365 | 252 | 165 | 7 | 480 | 723 | 238 | 484 | 8.52e-19 | 90.9 |
MS.gene50646.t1 | MTR_3g065080 | 47.297 | 74 | 39 | 0 | 240 | 313 | 35 | 108 | 2.21e-18 | 89.0 |
MS.gene50646.t1 | MTR_5g048050 | 45.205 | 73 | 40 | 0 | 242 | 314 | 26 | 98 | 7.24e-18 | 87.4 |
MS.gene50646.t1 | MTR_2g011140 | 29.167 | 240 | 161 | 4 | 484 | 717 | 147 | 383 | 8.07e-18 | 86.7 |
MS.gene50646.t1 | MTR_2g011140 | 53.125 | 64 | 30 | 0 | 244 | 307 | 18 | 81 | 4.03e-17 | 84.3 |
MS.gene50646.t1 | MTR_1g093995 | 55.932 | 59 | 26 | 0 | 254 | 312 | 1 | 59 | 1.35e-17 | 82.4 |
MS.gene50646.t1 | MTR_1g093995 | 50.000 | 68 | 33 | 1 | 575 | 641 | 128 | 195 | 5.32e-12 | 65.9 |
MS.gene50646.t1 | MTR_6g071340 | 43.836 | 73 | 41 | 0 | 242 | 314 | 6 | 78 | 1.39e-17 | 86.3 |
MS.gene50646.t1 | MTR_5g077510 | 41.892 | 74 | 43 | 0 | 240 | 313 | 34 | 107 | 1.89e-17 | 85.9 |
MS.gene50646.t1 | MTR_3g096370 | 43.056 | 72 | 41 | 0 | 236 | 307 | 5 | 76 | 2.01e-16 | 82.4 |
MS.gene50646.t1 | MTR_1g056840 | 46.753 | 77 | 35 | 2 | 243 | 313 | 9 | 85 | 6.28e-16 | 81.3 |
MS.gene50646.t1 | MTR_8g092870 | 44.928 | 69 | 38 | 0 | 239 | 307 | 8 | 76 | 1.43e-15 | 80.1 |
MS.gene50646.t1 | MTR_3g095730 | 42.254 | 71 | 41 | 0 | 239 | 309 | 11 | 81 | 1.92e-15 | 79.7 |
MS.gene50646.t1 | MTR_2g015870 | 28.723 | 282 | 196 | 5 | 440 | 717 | 86 | 366 | 2.08e-15 | 79.7 |
MS.gene50646.t1 | MTR_1g056880 | 46.753 | 77 | 35 | 2 | 243 | 313 | 9 | 85 | 2.20e-15 | 79.7 |
MS.gene50646.t1 | MTR_1g056870 | 46.753 | 77 | 35 | 2 | 243 | 313 | 9 | 85 | 2.58e-15 | 79.3 |
MS.gene50646.t1 | MTR_2g087350 | 47.297 | 74 | 35 | 2 | 242 | 311 | 7 | 80 | 6.23e-15 | 77.8 |
MS.gene50646.t1 | MTR_5g015210 | 42.529 | 87 | 50 | 0 | 242 | 328 | 68 | 154 | 8.11e-15 | 77.8 |
MS.gene50646.t1 | MTR_7g076220 | 29.796 | 245 | 161 | 7 | 480 | 717 | 237 | 477 | 1.17e-14 | 77.8 |
MS.gene50646.t1 | MTR_1g090320 | 34.351 | 131 | 77 | 4 | 242 | 368 | 514 | 639 | 1.95e-14 | 78.2 |
MS.gene50646.t1 | MTR_1g090320 | 34.351 | 131 | 77 | 4 | 242 | 368 | 516 | 641 | 2.09e-14 | 77.8 |
MS.gene50646.t1 | MTR_7g117890 | 21.807 | 321 | 223 | 8 | 10 | 311 | 14 | 325 | 3.17e-14 | 77.0 |
MS.gene50646.t1 | MTR_7g007780 | 31.792 | 173 | 114 | 2 | 469 | 638 | 588 | 759 | 4.51e-14 | 76.6 |
MS.gene50646.t1 | MTR_7g007780 | 26.102 | 295 | 163 | 7 | 476 | 716 | 464 | 757 | 1.84e-13 | 74.7 |
MS.gene50646.t1 | MTR_7g106340 | 48.649 | 74 | 33 | 4 | 242 | 311 | 9 | 81 | 4.87e-14 | 75.5 |
MS.gene50646.t1 | MTR_1g056910 | 45.833 | 72 | 37 | 2 | 242 | 311 | 7 | 78 | 1.20e-13 | 73.9 |
MS.gene50646.t1 | MTR_8g039560 | 26.042 | 288 | 194 | 7 | 440 | 709 | 8 | 294 | 2.43e-13 | 72.4 |
MS.gene50646.t1 | MTR_4g051515 | 40.741 | 81 | 45 | 2 | 241 | 318 | 6 | 86 | 2.67e-13 | 72.8 |
MS.gene50646.t1 | MTR_1g017770 | 39.080 | 87 | 53 | 0 | 242 | 328 | 46 | 132 | 3.40e-13 | 72.8 |
MS.gene50646.t1 | MTR_7g077780 | 35.514 | 107 | 65 | 3 | 205 | 309 | 790 | 894 | 3.87e-13 | 73.6 |
MS.gene50646.t1 | MTR_1g100820 | 45.455 | 66 | 36 | 0 | 242 | 307 | 649 | 714 | 6.48e-13 | 72.8 |
MS.gene50646.t1 | MTR_1g100820 | 45.455 | 66 | 36 | 0 | 242 | 307 | 647 | 712 | 6.58e-13 | 72.8 |
MS.gene50646.t1 | MTR_8g027140 | 21.441 | 597 | 384 | 21 | 4 | 530 | 10 | 591 | 1.09e-12 | 72.0 |
MS.gene50646.t1 | MTR_2g007630 | 37.705 | 122 | 71 | 4 | 487 | 606 | 80 | 198 | 1.45e-12 | 68.9 |
MS.gene50646.t1 | MTR_8g103227 | 38.679 | 106 | 59 | 4 | 211 | 311 | 362 | 466 | 2.66e-12 | 71.2 |
MS.gene50646.t1 | MTR_3g087800 | 41.748 | 103 | 59 | 1 | 622 | 723 | 515 | 617 | 5.95e-12 | 70.1 |
MS.gene50646.t1 | MTR_3g019360 | 33.333 | 132 | 88 | 0 | 480 | 611 | 291 | 422 | 6.42e-12 | 69.7 |
MS.gene50646.t1 | MTR_1g104870 | 27.509 | 269 | 178 | 6 | 399 | 650 | 143 | 411 | 7.19e-12 | 69.3 |
MS.gene50646.t1 | MTR_1g029790 | 29.796 | 245 | 154 | 8 | 485 | 719 | 473 | 709 | 2.61e-11 | 68.2 |
MS.gene50646.t1 | MTR_1g029790 | 37.079 | 89 | 56 | 0 | 632 | 720 | 499 | 587 | 6.43e-11 | 66.6 |
MS.gene50646.t1 | MTR_3g008270 | 31.148 | 122 | 81 | 3 | 188 | 307 | 675 | 795 | 7.02e-11 | 66.2 |
MS.gene50646.t1 | MTR_2g096850 | 37.037 | 81 | 51 | 0 | 227 | 307 | 575 | 655 | 9.11e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene50646.t1 | AT3G54790 | 52.865 | 768 | 305 | 10 | 7 | 726 | 2 | 760 | 0.0 | 714 |
MS.gene50646.t1 | AT3G54790 | 52.865 | 768 | 305 | 10 | 7 | 726 | 2 | 760 | 0.0 | 714 |
MS.gene50646.t1 | AT3G54790 | 52.705 | 721 | 284 | 10 | 54 | 726 | 13 | 724 | 0.0 | 675 |
MS.gene50646.t1 | AT5G67340 | 39.972 | 713 | 397 | 7 | 14 | 718 | 13 | 702 | 6.71e-164 | 489 |
MS.gene50646.t1 | AT5G67340 | 39.972 | 713 | 397 | 7 | 14 | 718 | 13 | 702 | 6.71e-164 | 489 |
MS.gene50646.t1 | AT2G23140 | 36.829 | 820 | 399 | 13 | 13 | 716 | 6 | 822 | 2.14e-144 | 443 |
MS.gene50646.t1 | AT2G23140 | 36.829 | 820 | 399 | 13 | 13 | 716 | 3 | 819 | 4.00e-144 | 442 |
MS.gene50646.t1 | AT2G23140 | 36.829 | 820 | 399 | 13 | 13 | 716 | 3 | 819 | 4.00e-144 | 442 |
MS.gene50646.t1 | AT2G23140 | 67.742 | 279 | 90 | 0 | 438 | 716 | 352 | 630 | 1.91e-122 | 380 |
MS.gene50646.t1 | AT2G23140 | 67.742 | 279 | 90 | 0 | 438 | 716 | 352 | 630 | 1.91e-122 | 380 |
MS.gene50646.t1 | AT3G01400 | 51.971 | 279 | 132 | 2 | 440 | 716 | 64 | 342 | 4.10e-79 | 257 |
MS.gene50646.t1 | AT4G16490 | 50.000 | 282 | 138 | 2 | 444 | 722 | 189 | 470 | 6.32e-73 | 244 |
MS.gene50646.t1 | AT5G58680 | 47.059 | 306 | 156 | 4 | 414 | 716 | 39 | 341 | 6.54e-72 | 238 |
MS.gene50646.t1 | AT1G71020 | 45.079 | 315 | 156 | 5 | 402 | 713 | 171 | 471 | 6.24e-67 | 229 |
MS.gene50646.t1 | AT1G71020 | 31.688 | 385 | 227 | 11 | 239 | 612 | 93 | 452 | 8.91e-36 | 142 |
MS.gene50646.t1 | AT1G71020 | 36.527 | 167 | 100 | 5 | 558 | 720 | 231 | 395 | 1.86e-14 | 77.0 |
MS.gene50646.t1 | AT1G71020 | 45.079 | 315 | 156 | 5 | 402 | 713 | 319 | 619 | 2.04e-65 | 228 |
MS.gene50646.t1 | AT1G71020 | 29.563 | 389 | 230 | 9 | 239 | 612 | 241 | 600 | 7.32e-35 | 141 |
MS.gene50646.t1 | AT1G71020 | 36.527 | 167 | 100 | 5 | 558 | 720 | 379 | 543 | 3.34e-14 | 76.6 |
MS.gene50646.t1 | AT3G54850 | 48.951 | 286 | 145 | 1 | 438 | 722 | 345 | 630 | 6.50e-65 | 227 |
MS.gene50646.t1 | AT3G54850 | 26.227 | 652 | 391 | 16 | 37 | 667 | 35 | 617 | 2.62e-46 | 175 |
MS.gene50646.t1 | AT3G46510 | 44.000 | 300 | 158 | 4 | 431 | 721 | 342 | 640 | 8.93e-65 | 228 |
MS.gene50646.t1 | AT3G46510 | 26.615 | 650 | 393 | 18 | 35 | 640 | 29 | 638 | 7.59e-49 | 183 |
MS.gene50646.t1 | AT1G23030 | 44.964 | 278 | 151 | 1 | 438 | 713 | 331 | 608 | 3.41e-64 | 225 |
MS.gene50646.t1 | AT1G23030 | 29.293 | 396 | 202 | 8 | 239 | 586 | 239 | 604 | 9.13e-34 | 137 |
MS.gene50646.t1 | AT1G24330 | 32.860 | 493 | 267 | 16 | 236 | 716 | 268 | 708 | 1.40e-62 | 223 |
MS.gene50646.t1 | AT1G24330 | 32.860 | 493 | 267 | 16 | 236 | 716 | 268 | 708 | 1.40e-62 | 223 |
MS.gene50646.t1 | AT2G28830 | 43.116 | 276 | 154 | 3 | 440 | 712 | 285 | 560 | 3.68e-62 | 218 |
MS.gene50646.t1 | AT2G28830 | 60.000 | 70 | 28 | 0 | 242 | 311 | 185 | 254 | 7.34e-23 | 103 |
MS.gene50646.t1 | AT5G42340 | 44.891 | 274 | 148 | 3 | 438 | 709 | 379 | 651 | 2.39e-52 | 193 |
MS.gene50646.t1 | AT5G42340 | 27.880 | 599 | 373 | 18 | 36 | 612 | 75 | 636 | 6.26e-43 | 166 |
MS.gene50646.t1 | AT1G27910 | 31.727 | 498 | 267 | 13 | 237 | 721 | 274 | 711 | 7.17e-51 | 190 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 37 | 316 | 2.68e-38 | 145 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 37 | 316 | 2.68e-38 | 145 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 37 | 316 | 2.68e-38 | 145 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 37 | 316 | 2.68e-38 | 145 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 37 | 316 | 2.68e-38 | 145 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 37 | 316 | 2.68e-38 | 145 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 37 | 316 | 2.68e-38 | 145 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 37 | 316 | 2.68e-38 | 145 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 37 | 316 | 2.68e-38 | 145 |
MS.gene50646.t1 | AT1G29340 | 38.488 | 291 | 162 | 7 | 440 | 719 | 408 | 692 | 1.21e-37 | 150 |
MS.gene50646.t1 | AT1G29340 | 27.427 | 412 | 238 | 16 | 242 | 608 | 306 | 701 | 9.60e-20 | 94.7 |
MS.gene50646.t1 | AT3G07360 | 37.102 | 283 | 165 | 8 | 441 | 713 | 172 | 451 | 2.57e-37 | 146 |
MS.gene50646.t1 | AT3G07360 | 27.385 | 325 | 210 | 9 | 210 | 526 | 39 | 345 | 3.48e-25 | 110 |
MS.gene50646.t1 | AT1G67530 | 35.357 | 280 | 168 | 7 | 448 | 717 | 434 | 710 | 4.57e-33 | 137 |
MS.gene50646.t1 | AT1G67530 | 59.722 | 72 | 29 | 0 | 242 | 313 | 273 | 344 | 3.28e-23 | 105 |
MS.gene50646.t1 | AT1G67530 | 35.357 | 280 | 168 | 7 | 448 | 717 | 434 | 710 | 4.57e-33 | 137 |
MS.gene50646.t1 | AT1G67530 | 59.722 | 72 | 29 | 0 | 242 | 313 | 273 | 344 | 3.28e-23 | 105 |
MS.gene50646.t1 | AT1G67530 | 35.357 | 280 | 168 | 7 | 448 | 717 | 434 | 710 | 4.57e-33 | 137 |
MS.gene50646.t1 | AT1G67530 | 59.722 | 72 | 29 | 0 | 242 | 313 | 273 | 344 | 3.28e-23 | 105 |
MS.gene50646.t1 | AT4G12710 | 35.816 | 282 | 169 | 7 | 443 | 713 | 50 | 330 | 4.30e-31 | 126 |
MS.gene50646.t1 | AT3G03440 | 30.742 | 283 | 186 | 5 | 440 | 714 | 66 | 346 | 1.55e-28 | 119 |
MS.gene50646.t1 | AT5G40140 | 29.749 | 279 | 191 | 3 | 443 | 717 | 233 | 510 | 3.60e-28 | 120 |
MS.gene50646.t1 | AT5G62560 | 33.463 | 257 | 165 | 3 | 462 | 713 | 258 | 513 | 6.61e-28 | 119 |
MS.gene50646.t1 | AT5G65200 | 31.321 | 265 | 170 | 4 | 462 | 715 | 248 | 511 | 3.12e-26 | 114 |
MS.gene50646.t1 | AT4G31890 | 31.365 | 271 | 172 | 8 | 455 | 713 | 160 | 428 | 2.68e-25 | 110 |
MS.gene50646.t1 | AT4G31890 | 31.365 | 271 | 172 | 8 | 455 | 713 | 160 | 428 | 2.68e-25 | 110 |
MS.gene50646.t1 | AT4G31890 | 31.365 | 271 | 172 | 8 | 455 | 713 | 160 | 428 | 2.68e-25 | 110 |
MS.gene50646.t1 | AT3G47820 | 33.333 | 282 | 175 | 6 | 445 | 714 | 208 | 488 | 4.84e-24 | 107 |
MS.gene50646.t1 | AT4G21350 | 35.950 | 242 | 150 | 3 | 448 | 687 | 104 | 342 | 1.15e-23 | 103 |
MS.gene50646.t1 | AT4G21350 | 47.887 | 71 | 36 | 1 | 238 | 307 | 2 | 72 | 8.01e-16 | 80.5 |
MS.gene50646.t1 | AT1G67530 | 57.895 | 76 | 32 | 0 | 242 | 317 | 273 | 348 | 1.94e-23 | 105 |
MS.gene50646.t1 | AT5G01830 | 26.633 | 398 | 223 | 10 | 237 | 589 | 270 | 643 | 3.74e-23 | 105 |
MS.gene50646.t1 | AT5G01830 | 30.921 | 304 | 173 | 10 | 436 | 722 | 368 | 651 | 8.43e-21 | 97.8 |
MS.gene50646.t1 | AT2G25130 | 30.337 | 267 | 169 | 8 | 461 | 713 | 132 | 395 | 4.19e-23 | 103 |
MS.gene50646.t1 | AT5G14510 | 34.025 | 241 | 146 | 8 | 484 | 714 | 43 | 280 | 5.22e-23 | 101 |
MS.gene50646.t1 | AT5G18320 | 33.333 | 276 | 170 | 7 | 451 | 713 | 173 | 447 | 3.63e-22 | 100 |
MS.gene50646.t1 | AT5G18320 | 26.923 | 364 | 204 | 11 | 213 | 575 | 45 | 347 | 2.94e-20 | 95.1 |
MS.gene50646.t1 | AT1G49780 | 49.351 | 77 | 39 | 0 | 238 | 314 | 11 | 87 | 2.03e-20 | 95.1 |
MS.gene50646.t1 | AT3G19380 | 51.282 | 78 | 37 | 1 | 238 | 314 | 11 | 88 | 2.52e-19 | 91.7 |
MS.gene50646.t1 | AT2G35930 | 51.389 | 72 | 34 | 1 | 241 | 311 | 12 | 83 | 2.29e-18 | 88.6 |
MS.gene50646.t1 | AT1G66160 | 50.000 | 70 | 35 | 0 | 239 | 308 | 31 | 100 | 2.34e-18 | 89.0 |
MS.gene50646.t1 | AT1G08315 | 26.460 | 291 | 192 | 7 | 440 | 709 | 9 | 298 | 7.64e-18 | 85.9 |
MS.gene50646.t1 | AT5G37490 | 44.872 | 78 | 43 | 0 | 236 | 313 | 26 | 103 | 1.01e-17 | 87.0 |
MS.gene50646.t1 | AT3G52450 | 50.000 | 72 | 35 | 1 | 241 | 311 | 7 | 78 | 1.10e-17 | 86.7 |
MS.gene50646.t1 | AT1G60190 | 26.549 | 339 | 219 | 11 | 245 | 573 | 282 | 600 | 1.19e-17 | 87.8 |
MS.gene50646.t1 | AT1G60190 | 30.196 | 255 | 156 | 9 | 432 | 671 | 372 | 619 | 2.20e-16 | 84.0 |
MS.gene50646.t1 | AT1G10560 | 29.352 | 293 | 188 | 8 | 443 | 720 | 393 | 681 | 1.74e-17 | 87.4 |
MS.gene50646.t1 | AT1G10560 | 25.797 | 345 | 210 | 11 | 247 | 573 | 294 | 610 | 3.27e-17 | 86.7 |
MS.gene50646.t1 | AT5G64660 | 46.377 | 69 | 37 | 0 | 239 | 307 | 8 | 76 | 1.97e-16 | 82.8 |
MS.gene50646.t1 | AT5G18340 | 36.364 | 132 | 77 | 3 | 184 | 311 | 15 | 143 | 3.24e-16 | 82.4 |
MS.gene50646.t1 | AT3G49810 | 26.064 | 376 | 198 | 12 | 241 | 548 | 64 | 427 | 9.68e-16 | 80.9 |
MS.gene50646.t1 | AT5G09800 | 41.250 | 80 | 47 | 0 | 240 | 319 | 10 | 89 | 1.17e-15 | 80.1 |
MS.gene50646.t1 | AT3G18710 | 42.254 | 71 | 41 | 0 | 239 | 309 | 10 | 80 | 1.63e-15 | 79.7 |
MS.gene50646.t1 | AT2G44900 | 27.797 | 295 | 158 | 8 | 476 | 716 | 475 | 768 | 1.92e-15 | 81.3 |
MS.gene50646.t1 | AT2G44900 | 31.792 | 173 | 114 | 2 | 469 | 638 | 599 | 770 | 7.00e-14 | 76.3 |
MS.gene50646.t1 | AT2G44900 | 31.250 | 192 | 119 | 3 | 480 | 659 | 390 | 580 | 5.00e-12 | 70.1 |
MS.gene50646.t1 | AT2G44900 | 27.797 | 295 | 158 | 8 | 476 | 716 | 475 | 768 | 1.92e-15 | 81.3 |
MS.gene50646.t1 | AT2G44900 | 31.792 | 173 | 114 | 2 | 469 | 638 | 599 | 770 | 7.00e-14 | 76.3 |
MS.gene50646.t1 | AT2G44900 | 31.250 | 192 | 119 | 3 | 480 | 659 | 390 | 580 | 5.00e-12 | 70.1 |
MS.gene50646.t1 | AT4G36550 | 42.667 | 75 | 43 | 0 | 240 | 314 | 218 | 292 | 2.29e-15 | 80.5 |
MS.gene50646.t1 | AT1G01660 | 40.476 | 84 | 42 | 1 | 237 | 312 | 486 | 569 | 2.99e-15 | 80.1 |
MS.gene50646.t1 | AT1G01660 | 40.476 | 84 | 42 | 1 | 237 | 312 | 485 | 568 | 3.11e-15 | 79.7 |
MS.gene50646.t1 | AT5G65920 | 25.758 | 330 | 198 | 8 | 241 | 561 | 60 | 351 | 4.45e-15 | 79.0 |
MS.gene50646.t1 | AT5G65920 | 25.758 | 330 | 198 | 8 | 241 | 561 | 60 | 351 | 4.45e-15 | 79.0 |
MS.gene50646.t1 | AT3G11840 | 47.368 | 76 | 38 | 2 | 239 | 313 | 8 | 82 | 7.81e-15 | 78.2 |
MS.gene50646.t1 | AT1G01680 | 44.776 | 67 | 37 | 0 | 245 | 311 | 237 | 303 | 1.56e-14 | 75.5 |
MS.gene50646.t1 | AT5G18330 | 35.780 | 109 | 68 | 2 | 212 | 320 | 37 | 143 | 2.06e-14 | 76.6 |
MS.gene50646.t1 | AT2G45920 | 28.485 | 165 | 112 | 3 | 147 | 307 | 229 | 391 | 1.17e-13 | 73.9 |
MS.gene50646.t1 | AT3G60350 | 33.333 | 171 | 109 | 3 | 472 | 638 | 592 | 761 | 3.08e-13 | 73.9 |
MS.gene50646.t1 | AT3G60350 | 29.268 | 246 | 161 | 5 | 476 | 709 | 466 | 710 | 2.89e-12 | 70.9 |
MS.gene50646.t1 | AT3G60350 | 31.955 | 266 | 161 | 8 | 462 | 709 | 362 | 625 | 1.52e-11 | 68.6 |
MS.gene50646.t1 | AT3G60350 | 33.333 | 171 | 109 | 3 | 472 | 638 | 592 | 761 | 3.08e-13 | 73.9 |
MS.gene50646.t1 | AT3G60350 | 29.268 | 246 | 161 | 5 | 476 | 709 | 466 | 710 | 2.89e-12 | 70.9 |
MS.gene50646.t1 | AT3G60350 | 31.955 | 266 | 161 | 8 | 462 | 709 | 362 | 625 | 1.52e-11 | 68.6 |
MS.gene50646.t1 | AT3G61390 | 30.114 | 176 | 98 | 6 | 138 | 307 | 188 | 344 | 4.55e-13 | 72.0 |
MS.gene50646.t1 | AT3G61390 | 30.114 | 176 | 98 | 6 | 138 | 307 | 263 | 419 | 6.31e-13 | 72.0 |
MS.gene50646.t1 | AT2G45910 | 41.429 | 70 | 41 | 0 | 242 | 311 | 764 | 833 | 1.05e-12 | 72.0 |
MS.gene50646.t1 | AT2G45910 | 41.429 | 70 | 41 | 0 | 242 | 311 | 764 | 833 | 1.05e-12 | 72.0 |
MS.gene50646.t1 | AT5G57035 | 42.424 | 66 | 38 | 0 | 242 | 307 | 709 | 774 | 1.58e-12 | 71.6 |
MS.gene50646.t1 | AT1G01670 | 38.571 | 70 | 43 | 0 | 242 | 311 | 211 | 280 | 3.58e-11 | 65.1 |
MS.gene50646.t1 | AT2G22125 | 39.806 | 103 | 61 | 1 | 622 | 723 | 513 | 615 | 3.63e-11 | 67.8 |
MS.gene50646.t1 | AT1G01670 | 38.571 | 70 | 43 | 0 | 242 | 311 | 295 | 364 | 4.18e-11 | 65.9 |
MS.gene50646.t1 | AT1G01670 | 38.571 | 70 | 43 | 0 | 242 | 311 | 295 | 364 | 4.18e-11 | 65.9 |
MS.gene50646.t1 | AT5G51270 | 30.168 | 179 | 100 | 8 | 142 | 311 | 642 | 804 | 4.77e-11 | 67.0 |
MS.gene50646.t1 | AT5G51270 | 30.168 | 179 | 100 | 8 | 142 | 311 | 642 | 804 | 4.77e-11 | 67.0 |
MS.gene50646.t1 | AT1G01830 | 27.551 | 294 | 201 | 7 | 431 | 717 | 203 | 491 | 5.50e-11 | 66.2 |
MS.gene50646.t1 | AT1G01830 | 27.551 | 294 | 201 | 7 | 431 | 717 | 203 | 491 | 5.50e-11 | 66.2 |
MS.gene50646.t1 | AT1G01830 | 27.551 | 294 | 201 | 7 | 431 | 717 | 203 | 491 | 5.50e-11 | 66.2 |
MS.gene50646.t1 | AT2G27430 | 25.939 | 293 | 189 | 5 | 440 | 716 | 79 | 359 | 6.79e-11 | 65.5 |
Find 150 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATAGCTTTGACAGTATAAT+TGG | 0.135710 | 1.2:+53089242 | None:intergenic |
AGCTGGAGCTGTCAAATTTC+TGG | 0.138706 | 1.2:-53088326 | MS.gene50646:CDS |
GCCCATGATCAAGCCACTTT+TGG | 0.245094 | 1.2:+53089316 | None:intergenic |
CCATATTATTGCAGATCTTC+TGG | 0.260798 | 1.2:+53090534 | None:intergenic |
CAAATTTCTGGTTGAGTTAA+CGG | 0.291686 | 1.2:-53088314 | MS.gene50646:CDS |
TCACTTCAATTGATTCGTTT+TGG | 0.293615 | 1.2:+53088788 | None:intergenic |
ACCACCATCTGCATCGGTTT+TGG | 0.297018 | 1.2:-53090191 | MS.gene50646:CDS |
TGTCTTTAAAACATGGATAA+GGG | 0.305967 | 1.2:+53088555 | None:intergenic |
CTGTGAATCTTGCTCATCTT+TGG | 0.314982 | 1.2:+53090371 | None:intergenic |
GTAAGTCTTTGACGAGTCTT+TGG | 0.320289 | 1.2:+53089282 | None:intergenic |
CTTGCCTCAGGAACACTTAG+AGG | 0.322163 | 1.2:-53088418 | MS.gene50646:CDS |
TTAGTTGAAATTGTTGAATC+AGG | 0.322937 | 1.2:-53088187 | MS.gene50646:CDS |
AGACAACAAGGCCTTGATTA+TGG | 0.328758 | 1.2:-53088596 | MS.gene50646:CDS |
TCACTTCTGCTGTGAATATA+TGG | 0.333005 | 1.2:+53089057 | None:intergenic |
CCAGAAGATCTGCAATAATA+TGG | 0.335837 | 1.2:-53090534 | MS.gene50646:CDS |
AGGGCATAGGTTTCACTGTT+TGG | 0.338516 | 1.2:+53090558 | None:intergenic |
GAATATAGCAGCGAAATTAA+AGG | 0.345847 | 1.2:+53088679 | None:intergenic |
CTTTCGTTGTCCTTTATCAT+TGG | 0.349699 | 1.2:-53089397 | MS.gene50646:CDS |
CTGTCTTTAAAACATGGATA+AGG | 0.350895 | 1.2:+53088554 | None:intergenic |
GATGCGGGAGGGATAGAAAA+TGG | 0.374443 | 1.2:-53088931 | MS.gene50646:CDS |
TCTTGAGACACTGAAGTTCC+TGG | 0.377501 | 1.2:+53089712 | None:intergenic |
AATTATGCCTACATAGTTCC+AGG | 0.379327 | 1.2:-53088123 | MS.gene50646:CDS |
TGCAGATGGTGGTGACTCTA+AGG | 0.382186 | 1.2:+53090201 | None:intergenic |
TGACCGGAAGCCACAATAAC+AGG | 0.383755 | 1.2:+53089360 | None:intergenic |
GCCAGTACTCGACGATGTTA+TGG | 0.384564 | 1.2:-53090489 | MS.gene50646:CDS |
ATGTAAAGTATGTGAAGAAT+TGG | 0.384663 | 1.2:-53090438 | MS.gene50646:CDS |
AGTAACTCTGAGCATAATAC+TGG | 0.389481 | 1.2:-53089180 | MS.gene50646:CDS |
AACATGAGTTCCAATGATAA+AGG | 0.394131 | 1.2:+53089387 | None:intergenic |
TTTCTGTGTTATGCTTTGTA+AGG | 0.397583 | 1.2:+53088737 | None:intergenic |
GATCCTGTTATTGTGGCTTC+CGG | 0.400104 | 1.2:-53089363 | MS.gene50646:CDS |
TTAGTTGCATTATCTCAATC+TGG | 0.415822 | 1.2:-53088061 | MS.gene50646:CDS |
AATGCATTTGAAGAACAAAA+AGG | 0.418610 | 1.2:-53089156 | MS.gene50646:CDS |
ACTAGAAATTGAACTTGAAA+AGG | 0.419589 | 1.2:+53089032 | None:intergenic |
AGTTTCACAACCATGCATAT+AGG | 0.419904 | 1.2:-53092152 | None:intergenic |
AGATCTGCAATAATATGGTT+GGG | 0.424411 | 1.2:-53090529 | MS.gene50646:CDS |
ACAGAAAACCGTATCATTGT+AGG | 0.429397 | 1.2:-53088721 | MS.gene50646:CDS |
TTCTATCCCTCCCGCATCTA+CGG | 0.431968 | 1.2:+53088936 | None:intergenic |
ATCCAAAAGTGGCTTGATCA+TGG | 0.434849 | 1.2:-53089318 | MS.gene50646:CDS |
CATTTCCTGTCTTTAAAACA+TGG | 0.435893 | 1.2:+53088548 | None:intergenic |
AGAGACTATTGCTGTGGAAA+AGG | 0.448997 | 1.2:-53089562 | MS.gene50646:CDS |
GCATCCATTGCATTCTCCAT+TGG | 0.451047 | 1.2:+53089116 | None:intergenic |
TTTATCATTGGAACTCATGT+TGG | 0.461750 | 1.2:-53089385 | MS.gene50646:CDS |
TTCCCTCCGCAATTGTCGAC+AGG | 0.465435 | 1.2:+53088245 | None:intergenic |
AAAGATGTATCAAGGGTGTC+TGG | 0.466382 | 1.2:-53088985 | MS.gene50646:CDS |
CGCCAATGCTTTAATTGCAC+CGG | 0.469718 | 1.2:+53088447 | None:intergenic |
AGATTGAGATAATGCAACTA+AGG | 0.474539 | 1.2:+53088063 | None:intergenic |
TTCACATCTTGTTTCAAACT+CGG | 0.478265 | 1.2:-53088863 | MS.gene50646:CDS |
CCGTTTCAAAAGATGTATCA+AGG | 0.481355 | 1.2:-53088993 | MS.gene50646:CDS |
TCCATAACATCGTCGAGTAC+TGG | 0.483296 | 1.2:+53090488 | None:intergenic |
TTGTCAACCATTCCATTGGC+AGG | 0.484404 | 1.2:+53088289 | None:intergenic |
TTGGCGGAACTTCTTGCCTC+AGG | 0.485196 | 1.2:-53088430 | MS.gene50646:CDS |
AGCAATGGTCTATATAGAAA+AGG | 0.491210 | 1.2:-53089682 | MS.gene50646:CDS |
ATAGCTTTGACAGTATAATT+GGG | 0.493767 | 1.2:+53089243 | None:intergenic |
GAGTACTTTGCAGTCAAAAG+TGG | 0.495169 | 1.2:-53089438 | MS.gene50646:CDS |
TTCCGGTGCAATTAAAGCAT+TGG | 0.495853 | 1.2:-53088449 | MS.gene50646:CDS |
CAGATCTTCTGGAAGGGCAT+AGG | 0.495873 | 1.2:+53090545 | None:intergenic |
TCTATTCAGCCTCTCTGTAA+TGG | 0.503208 | 1.2:-53088497 | MS.gene50646:CDS |
TCACATCTTGTTTCAAACTC+GGG | 0.504312 | 1.2:-53088862 | MS.gene50646:CDS |
AAGATCTGCAATAATATGGT+TGG | 0.507887 | 1.2:-53090530 | MS.gene50646:CDS |
CGGTGCAATTAAAGCATTGG+CGG | 0.507977 | 1.2:-53088446 | MS.gene50646:CDS |
CTCAGAGTTACTAGAACTGT+TGG | 0.510983 | 1.2:+53089191 | None:intergenic |
TCAACAATTTCAACTAATGA+CGG | 0.515732 | 1.2:+53088193 | None:intergenic |
TTGTCTCTCGTATGTTTGAC+CGG | 0.516665 | 1.2:+53089344 | None:intergenic |
TTTCACTTAAACAGGTCAAA+CGG | 0.517237 | 1.2:-53090642 | MS.gene50646:intron |
AGGAACACTTAGAGGAAAGA+AGG | 0.519961 | 1.2:-53088410 | MS.gene50646:CDS |
TACTCCAAGAGCAAAGGAAA+AGG | 0.525058 | 1.2:-53088038 | MS.gene50646:intron |
CAACAATTTCAACTAATGAC+GGG | 0.525187 | 1.2:+53088194 | None:intergenic |
GAAGCAGCTACTACCACAAA+GGG | 0.525301 | 1.2:-53087336 | MS.gene50646:CDS |
CAAGGCCTTGATTATGGAAG+CGG | 0.526592 | 1.2:-53088590 | MS.gene50646:CDS |
TTTCGCTGCTATATTCAGAC+GGG | 0.527949 | 1.2:-53088672 | MS.gene50646:CDS |
TCCAAAAGTGGCTTGATCAT+GGG | 0.528426 | 1.2:-53089317 | MS.gene50646:CDS |
AGCCTTGTCAACCATTCCAT+TGG | 0.531081 | 1.2:+53088285 | None:intergenic |
AAGGCCTTGATTATGGAAGC+GGG | 0.532774 | 1.2:-53088589 | MS.gene50646:CDS |
GATAAAGGACAACGAAAGTA+CGG | 0.534573 | 1.2:+53089402 | None:intergenic |
TGTCGACAGGTTTGACAGAA+CGG | 0.535793 | 1.2:+53088258 | None:intergenic |
AGAATATAGAAATAGAAAAG+TGG | 0.536189 | 1.2:-53089092 | MS.gene50646:CDS |
CATGTTGGATCCTGTTATTG+TGG | 0.537393 | 1.2:-53089370 | MS.gene50646:CDS |
TAAAACCAGTGTACAAAACC+TGG | 0.538109 | 1.2:+53088105 | None:intergenic |
CGTATCATTGTAGGGCAGTG+TGG | 0.543384 | 1.2:-53088712 | MS.gene50646:CDS |
ACATAAAATGAAAAGCGACT+TGG | 0.550069 | 1.2:-53089520 | MS.gene50646:CDS |
GTATCATTGTAGGGCAGTGT+GGG | 0.550685 | 1.2:-53088711 | MS.gene50646:CDS |
AGCTGCCGCAGAATTCTCCT+TGG | 0.550863 | 1.2:+53088519 | None:intergenic |
ACCTTGCAAGGAAAATCTAA+AGG | 0.552613 | 1.2:-53089631 | MS.gene50646:CDS |
GTCTTTAAAACATGGATAAG+GGG | 0.554803 | 1.2:+53088556 | None:intergenic |
AAGGTGTCGTCCGTAGATGC+GGG | 0.555598 | 1.2:-53088946 | MS.gene50646:CDS |
CACACTGCCCTACAATGATA+CGG | 0.556153 | 1.2:+53088713 | None:intergenic |
ATTTCGCTGCTATATTCAGA+CGG | 0.556954 | 1.2:-53088673 | MS.gene50646:CDS |
AGATGATACTGAACCTTGCA+AGG | 0.558284 | 1.2:-53089643 | MS.gene50646:CDS |
AAAGCTCGAATAGTTCAAGC+TGG | 0.558721 | 1.2:-53088343 | MS.gene50646:CDS |
TACAAAACCTGGAACTATGT+AGG | 0.558754 | 1.2:+53088116 | None:intergenic |
AGAGACAATCCATCCAAAAG+TGG | 0.560254 | 1.2:-53089329 | MS.gene50646:CDS |
TGTTGAATCAGGTTCTCAGA+GGG | 0.564013 | 1.2:-53088176 | MS.gene50646:CDS |
CTTTCCTCTAAGTGTTCCTG+AGG | 0.564605 | 1.2:+53088414 | None:intergenic |
GAATATAGAAATAGAAAAGT+GGG | 0.566712 | 1.2:-53089091 | MS.gene50646:CDS |
GAAGGTGTCGTCCGTAGATG+CGG | 0.567749 | 1.2:-53088947 | MS.gene50646:CDS |
AACGGATCCTGCCAATGGAA+TGG | 0.569507 | 1.2:-53088296 | MS.gene50646:CDS |
GGCCTTGATTATGGAAGCGG+GGG | 0.573918 | 1.2:-53088587 | MS.gene50646:CDS |
CAGAAAACCGTATCATTGTA+GGG | 0.574472 | 1.2:-53088720 | MS.gene50646:CDS |
GACAGGAAATGATGGTGCCA+AGG | 0.574539 | 1.2:-53088536 | MS.gene50646:CDS |
TATTCTCATGAAATATTGAG+AGG | 0.577297 | 1.2:+53088365 | None:intergenic |
AAGGAAAGATTGAACGCTGA+AGG | 0.579752 | 1.2:-53089543 | MS.gene50646:CDS |
ATGCTTTAATTGCACCGGAA+CGG | 0.580585 | 1.2:+53088452 | None:intergenic |
AGGTTAGAAATTGCAAGAGA+AGG | 0.585061 | 1.2:-53088223 | MS.gene50646:CDS |
GATCTGCAATAATATGGTTG+GGG | 0.585533 | 1.2:-53090528 | MS.gene50646:CDS |
GTCAAACCTGTCGACAATTG+CGG | 0.586932 | 1.2:-53088251 | MS.gene50646:CDS |
ATCTGGTACTCCAAGAGCAA+AGG | 0.587517 | 1.2:-53088044 | MS.gene50646:CDS |
ATTATTGCAGATCTTCTGGA+AGG | 0.589284 | 1.2:+53090538 | None:intergenic |
AGAGTCACCACCATCTGCAT+CGG | 0.589320 | 1.2:-53090197 | MS.gene50646:CDS |
AGCCTCTCTGTAATGGAGAA+CGG | 0.590485 | 1.2:-53088490 | MS.gene50646:CDS |
AGATCCAATGGAGAATGCAA+TGG | 0.591622 | 1.2:-53089120 | MS.gene50646:CDS |
ACTTAAATTGACATCAACTC+AGG | 0.593345 | 1.2:-53089595 | MS.gene50646:CDS |
GAGTTAACGGATCCTGCCAA+TGG | 0.598051 | 1.2:-53088301 | MS.gene50646:CDS |
TTAGAAATTGCAAGAGAAGG+TGG | 0.599313 | 1.2:-53088220 | MS.gene50646:CDS |
GGAACTTCAGTGTCTCAAGA+AGG | 0.599469 | 1.2:-53089709 | MS.gene50646:CDS |
ATCAGGTTCTCAGAGGGGAA+AGG | 0.606091 | 1.2:-53088170 | MS.gene50646:CDS |
TGTCGACAATTGCGGAGGGA+AGG | 0.610973 | 1.2:-53088243 | MS.gene50646:CDS |
GATATCTCTTTCAGATCCAA+TGG | 0.611138 | 1.2:-53089132 | MS.gene50646:CDS |
GATTGAGATAATGCAACTAA+GGG | 0.611793 | 1.2:+53088064 | None:intergenic |
CTTGAAAGAGACTATTGCTG+TGG | 0.614279 | 1.2:-53089568 | MS.gene50646:CDS |
TTATTGCAGATCTTCTGGAA+GGG | 0.616400 | 1.2:+53090539 | None:intergenic |
TCAAAGCTATGATAGCAACT+TGG | 0.617844 | 1.2:-53089230 | MS.gene50646:CDS |
ATCAATTAATGAAGACAACA+AGG | 0.618009 | 1.2:-53088608 | MS.gene50646:CDS |
CGTTTCAAAAGATGTATCAA+GGG | 0.621464 | 1.2:-53088992 | MS.gene50646:CDS |
ATATGCGTGTTAACGAAGCA+AGG | 0.624151 | 1.2:-53090415 | MS.gene50646:CDS |
TTAGCCAAAACCGATGCAGA+TGG | 0.627265 | 1.2:+53090187 | None:intergenic |
CAATTTATTGACATGAGACG+AGG | 0.630618 | 1.2:+53088822 | None:intergenic |
TATGATAGCAACTTGGTGTG+AGG | 0.634224 | 1.2:-53089223 | MS.gene50646:CDS |
GTGTCGTCCGTAGATGCGGG+AGG | 0.637385 | 1.2:-53088943 | MS.gene50646:CDS |
GCCAAAACCGATGCAGATGG+TGG | 0.638983 | 1.2:+53090190 | None:intergenic |
AAACCTGTCGACAATTGCGG+AGG | 0.639239 | 1.2:-53088248 | MS.gene50646:CDS |
TGAGATAATGCAACTAAGGG+AGG | 0.643063 | 1.2:+53088067 | None:intergenic |
TATGCGTGTTAACGAAGCAA+GGG | 0.643177 | 1.2:-53090414 | MS.gene50646:CDS |
TCTCAAGAAGGAAACAGCAA+TGG | 0.643563 | 1.2:-53089697 | MS.gene50646:CDS |
AGGCCTTGATTATGGAAGCG+GGG | 0.646219 | 1.2:-53088588 | MS.gene50646:CDS |
AACCTGTCGACAATTGCGGA+GGG | 0.649763 | 1.2:-53088247 | MS.gene50646:CDS |
TATCATTGTAGGGCAGTGTG+GGG | 0.649782 | 1.2:-53088710 | MS.gene50646:CDS |
GGAAGCAGCTACTACCACAA+AGG | 0.655836 | 1.2:-53087337 | MS.gene50646:CDS |
TTTATTGACATGAGACGAGG+TGG | 0.656546 | 1.2:+53088825 | None:intergenic |
TACCGTTCTCCATTACAGAG+AGG | 0.659126 | 1.2:+53088488 | None:intergenic |
TGTCGTCCGTAGATGCGGGA+GGG | 0.663917 | 1.2:-53088942 | MS.gene50646:CDS |
TTGTTGAATCAGGTTCTCAG+AGG | 0.664892 | 1.2:-53088177 | MS.gene50646:CDS |
AAGGACAACGAAAGTACGGA+GGG | 0.665746 | 1.2:+53089406 | None:intergenic |
GTTGAATCAGGTTCTCAGAG+GGG | 0.666113 | 1.2:-53088175 | MS.gene50646:CDS |
TGCCAATGGAATGGTTGACA+AGG | 0.668863 | 1.2:-53088287 | MS.gene50646:CDS |
CTACTGCTGCAGAAGAACTG+AGG | 0.670399 | 1.2:-53088762 | MS.gene50646:CDS |
GAGGTTATATAAAGCAGTAG+CGG | 0.675036 | 1.2:+53088384 | None:intergenic |
AAAGGACAACGAAAGTACGG+AGG | 0.702184 | 1.2:+53089405 | None:intergenic |
TGGTGCCAAGGAGAATTCTG+CGG | 0.713773 | 1.2:-53088524 | MS.gene50646:CDS |
TCACATAATCACGTAAGACG+CGG | 0.714629 | 1.2:+53089469 | None:intergenic |
TGGTAAGTATCAAATTACGA+AGG | 0.715980 | 1.2:-53088965 | MS.gene50646:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTAGTAAAAAAATATTAG+TGG | + | chr1.2:53087775-53087794 | None:intergenic | 15.0% |
!! | GAATTATTGTAAATGAATAT+AGG | - | chr1.2:53088707-53088726 | MS.gene50646:CDS | 15.0% |
!! | GTTATAAAAAATCAAACAAA+GGG | + | chr1.2:53087946-53087965 | None:intergenic | 15.0% |
!! | TAAATCAAAAACAAAAAACA+TGG | + | chr1.2:53087426-53087445 | None:intergenic | 15.0% |
!! | TTCTTTCTTAAAATATGAAT+TGG | + | chr1.2:53091800-53091819 | None:intergenic | 15.0% |
!!! | ATTTTAAGAAAGAAAAACAA+AGG | - | chr1.2:53091806-53091825 | MS.gene50646:intron | 15.0% |
!!! | GTTTTTTGTTTTTGATTTAT+AGG | - | chr1.2:53087427-53087446 | MS.gene50646:intron | 15.0% |
!!! | TTACATAAATTTTGATGTAA+AGG | + | chr1.2:53089014-53089033 | None:intergenic | 15.0% |
!!! | TTTTAAGAAAGAAAAACAAA+GGG | - | chr1.2:53091807-53091826 | MS.gene50646:intron | 15.0% |
!!! | TTTTATATGTCATTTTCATT+GGG | - | chr1.2:53087836-53087855 | MS.gene50646:intron | 15.0% |
!!! | TTTTGTTTTTGCTTAAAAAA+TGG | - | chr1.2:53087375-53087394 | MS.gene50646:CDS | 15.0% |
!! | AATGAATATAGGACTAAATA+AGG | - | chr1.2:53088718-53088737 | MS.gene50646:CDS | 20.0% |
!! | AGAATATAGAAATAGAAAAG+TGG | - | chr1.2:53090374-53090393 | MS.gene50646:CDS | 20.0% |
!! | CAACTTGTATTTAAATACTA+TGG | + | chr1.2:53089422-53089441 | None:intergenic | 20.0% |
!! | CTTAATATGTGTTTATAAGT+GGG | - | chr1.2:53088011-53088030 | MS.gene50646:intron | 20.0% |
!! | GAATATAGAAATAGAAAAGT+GGG | - | chr1.2:53090375-53090394 | MS.gene50646:CDS | 20.0% |
!! | GGTTATAAAAAATCAAACAA+AGG | + | chr1.2:53087947-53087966 | None:intergenic | 20.0% |
!! | TCTTAATATGTGTTTATAAG+TGG | - | chr1.2:53088010-53088029 | MS.gene50646:intron | 20.0% |
!!! | AACTTATACATTTACCATTT+TGG | - | chr1.2:53087622-53087641 | MS.gene50646:intron | 20.0% |
!!! | AAGTCATTTTGTTGAAATTA+TGG | - | chr1.2:53091853-53091872 | MS.gene50646:intron | 20.0% |
!!! | ACTTTTCTATTTCTATATTC+TGG | + | chr1.2:53090375-53090394 | None:intergenic | 20.0% |
!!! | ATATCTTTATTCTTTTGAAC+TGG | - | chr1.2:53089566-53089585 | MS.gene50646:CDS | 20.0% |
!!! | CAGATTTTAAGTATAAATGA+TGG | + | chr1.2:53087472-53087491 | None:intergenic | 20.0% |
!!! | GTTTTATATGTCATTTTCAT+TGG | - | chr1.2:53087835-53087854 | MS.gene50646:intron | 20.0% |
!!! | TAAAATCTGAACTTTTTGTT+GGG | - | chr1.2:53087483-53087502 | MS.gene50646:intron | 20.0% |
!!! | TATCTTTATTCTTTTGAACT+GGG | - | chr1.2:53089567-53089586 | MS.gene50646:CDS | 20.0% |
!!! | TTAAAATCTGAACTTTTTGT+TGG | - | chr1.2:53087482-53087501 | MS.gene50646:intron | 20.0% |
!!! | TTGAATTATGTTGATTTAAG+TGG | - | chr1.2:53087734-53087753 | MS.gene50646:intron | 20.0% |
!!! | TTTATATGTCATTTTCATTG+GGG | - | chr1.2:53087837-53087856 | MS.gene50646:intron | 20.0% |
!!! | TTTTGTTTTTGATTTATAGG+TGG | - | chr1.2:53087430-53087449 | MS.gene50646:intron | 20.0% |
! | AAAACCAGATTGTAAAGTAA+GGG | + | chr1.2:53088043-53088062 | None:intergenic | 25.0% |
! | AAGCAATATATGATTTACTG+GGG | + | chr1.2:53088768-53088787 | None:intergenic | 25.0% |
! | AAGGGATTTCATTGAAAAAT+GGG | - | chr1.2:53089070-53089089 | MS.gene50646:CDS | 25.0% |
! | AAGTAAAGGAATGAATTGTT+AGG | + | chr1.2:53091902-53091921 | None:intergenic | 25.0% |
! | AATAAGTTCTTAGAATAGGT+TGG | + | chr1.2:53088460-53088479 | None:intergenic | 25.0% |
! | AATGCATTTGAAGAACAAAA+AGG | - | chr1.2:53090310-53090329 | MS.gene50646:intron | 25.0% |
! | AATTGCATCCTGATAAAATT+AGG | - | chr1.2:53089635-53089654 | MS.gene50646:CDS | 25.0% |
! | ACTAGAAATTGAACTTGAAA+AGG | + | chr1.2:53090437-53090456 | None:intergenic | 25.0% |
! | AGCAAGATGTTCTTAAAATT+TGG | + | chr1.2:53088309-53088328 | None:intergenic | 25.0% |
! | ATAAAAAATCAAACAAAGGG+TGG | + | chr1.2:53087943-53087962 | None:intergenic | 25.0% |
! | ATAAGTTCTTAGAATAGGTT+GGG | + | chr1.2:53088459-53088478 | None:intergenic | 25.0% |
! | ATCAATTAATGAAGACAACA+AGG | - | chr1.2:53090858-53090877 | MS.gene50646:intron | 25.0% |
! | ATGTAAAGTATGTGAAGAAT+TGG | - | chr1.2:53089028-53089047 | MS.gene50646:CDS | 25.0% |
! | ATTATAAACCAAAGGTAGAT+AGG | + | chr1.2:53088503-53088522 | None:intergenic | 25.0% |
! | CCAATAGTATTATAAACCAA+AGG | + | chr1.2:53088511-53088530 | None:intergenic | 25.0% |
! | GAAGAATAAGTTCTTAGAAT+AGG | + | chr1.2:53088464-53088483 | None:intergenic | 25.0% |
! | GAAGCAATATATGATTTACT+GGG | + | chr1.2:53088769-53088788 | None:intergenic | 25.0% |
! | GCAAGATGTTCTTAAAATTT+GGG | + | chr1.2:53088308-53088327 | None:intergenic | 25.0% |
! | TAAAACCAGATTGTAAAGTA+AGG | + | chr1.2:53088044-53088063 | None:intergenic | 25.0% |
! | TATCATCTTAGAATTTGCAT+TGG | + | chr1.2:53088156-53088175 | None:intergenic | 25.0% |
! | TATTCTCATGAAATATTGAG+AGG | + | chr1.2:53091104-53091123 | None:intergenic | 25.0% |
! | TCAACAATTTCAACTAATGA+CGG | + | chr1.2:53091276-53091295 | None:intergenic | 25.0% |
! | TGAAGCAATATATGATTTAC+TGG | + | chr1.2:53088770-53088789 | None:intergenic | 25.0% |
! | TTAGTTGAAATTGTTGAATC+AGG | - | chr1.2:53091279-53091298 | MS.gene50646:intron | 25.0% |
! | TTCAATGTAATTCCAATTCA+TGG | + | chr1.2:53088690-53088709 | None:intergenic | 25.0% |
!! | AAATGATGGAAGAAAATGAA+TGG | + | chr1.2:53087458-53087477 | None:intergenic | 25.0% |
!! | ATAATGATTTTGCCATGAAT+TGG | - | chr1.2:53088675-53088694 | MS.gene50646:CDS | 25.0% |
!! | ATTAGGAGCATAAAGTATTA+TGG | - | chr1.2:53089652-53089671 | MS.gene50646:CDS | 25.0% |
!! | CCTTTGGTTTATAATACTAT+TGG | - | chr1.2:53088508-53088527 | MS.gene50646:CDS | 25.0% |
!! | TTTATGCTCCTAATTTTATC+AGG | + | chr1.2:53089646-53089665 | None:intergenic | 25.0% |
!!! | ACATTTACCATTTTGGTTTT+TGG | - | chr1.2:53087629-53087648 | MS.gene50646:intron | 25.0% |
!!! | ACTTTACAATCTGGTTTTAT+GGG | - | chr1.2:53088045-53088064 | MS.gene50646:CDS | 25.0% |
!!! | ATAGCTTTGACAGTATAATT+GGG | + | chr1.2:53090226-53090245 | None:intergenic | 25.0% |
!!! | ATTTACCATTTTGGTTTTTG+GGG | - | chr1.2:53087631-53087650 | MS.gene50646:intron | 25.0% |
!!! | CATTTACCATTTTGGTTTTT+GGG | - | chr1.2:53087630-53087649 | MS.gene50646:intron | 25.0% |
!!! | TACTTTACAATCTGGTTTTA+TGG | - | chr1.2:53088044-53088063 | MS.gene50646:CDS | 25.0% |
!!! | TAGGAATGTTTTGTTTATTG+TGG | - | chr1.2:53087697-53087716 | MS.gene50646:intron | 25.0% |
!!! | TGTCTTTAAAACATGGATAA+GGG | + | chr1.2:53090914-53090933 | None:intergenic | 25.0% |
AAAAGTTCTTTCTTCTTCTG+TGG | - | chr1.2:53087802-53087821 | MS.gene50646:intron | 30.0% | |
AAAATGAGTTTATAAGTGGG+AGG | - | chr1.2:53091731-53091750 | MS.gene50646:intron | 30.0% | |
AAAATGAGTTTATATGTGCG+AGG | - | chr1.2:53088393-53088412 | MS.gene50646:CDS | 30.0% | |
AACATGAGTTCCAATGATAA+AGG | + | chr1.2:53090082-53090101 | None:intergenic | 30.0% | |
AAGATCTGCAATAATATGGT+TGG | - | chr1.2:53088936-53088955 | MS.gene50646:CDS | 30.0% | |
AAGGGATGTTGAATTTGATT+AGG | - | chr1.2:53087678-53087697 | MS.gene50646:intron | 30.0% | |
AATATGTGTTTATAAGTGGG+AGG | - | chr1.2:53088014-53088033 | MS.gene50646:intron | 30.0% | |
AATGACTTCACTAGTAGTAT+AGG | + | chr1.2:53091841-53091860 | None:intergenic | 30.0% | |
ACATAAAATGAAAAGCGACT+TGG | - | chr1.2:53089946-53089965 | MS.gene50646:intron | 30.0% | |
ACTTAAATTGACATCAACTC+AGG | - | chr1.2:53089871-53089890 | MS.gene50646:intron | 30.0% | |
ACTTTGTAGAACCTGAAAAT+AGG | + | chr1.2:53089184-53089203 | None:intergenic | 30.0% | |
AGATCTGCAATAATATGGTT+GGG | - | chr1.2:53088937-53088956 | MS.gene50646:CDS | 30.0% | |
AGATTGAGATAATGCAACTA+AGG | + | chr1.2:53091406-53091425 | None:intergenic | 30.0% | |
AGCAATGGTCTATATAGAAA+AGG | - | chr1.2:53089784-53089803 | MS.gene50646:intron | 30.0% | |
AGGGATTTCATTGAAAAATG+GGG | - | chr1.2:53089071-53089090 | MS.gene50646:CDS | 30.0% | |
AGTCAAACTAAGTATTCTGT+TGG | - | chr1.2:53089151-53089170 | MS.gene50646:CDS | 30.0% | |
ATATATGATTTACTGGGGAA+TGG | + | chr1.2:53088763-53088782 | None:intergenic | 30.0% | |
ATATGTCAACACAAAAGGTA+AGG | - | chr1.2:53087868-53087887 | MS.gene50646:intron | 30.0% | |
ATGAAAGCTATTTGTCAAGT+TGG | - | chr1.2:53087551-53087570 | MS.gene50646:intron | 30.0% | |
CAACAATTTCAACTAATGAC+GGG | + | chr1.2:53091275-53091294 | None:intergenic | 30.0% | |
CAAGGGATTTCATTGAAAAA+TGG | - | chr1.2:53089069-53089088 | MS.gene50646:CDS | 30.0% | |
CCGAAAATGAGTTTATAAGT+GGG | - | chr1.2:53091728-53091747 | MS.gene50646:intron | 30.0% | |
CGTTTCAAAAGATGTATCAA+GGG | - | chr1.2:53090474-53090493 | MS.gene50646:CDS | 30.0% | |
CTAGCACAAAATTACAAAAG+AGG | + | chr1.2:53087968-53087987 | None:intergenic | 30.0% | |
GAATATAGCAGCGAAATTAA+AGG | + | chr1.2:53090790-53090809 | None:intergenic | 30.0% | |
GATTGAGATAATGCAACTAA+GGG | + | chr1.2:53091405-53091424 | None:intergenic | 30.0% | |
TAAACATAACTCCAGACAAA+AGG | + | chr1.2:53091969-53091988 | None:intergenic | 30.0% | |
TAATTGAATGTTACCACATG+TGG | - | chr1.2:53091615-53091634 | MS.gene50646:intron | 30.0% | |
TAGGGGTAATTGTTGTAATA+TGG | - | chr1.2:53089395-53089414 | MS.gene50646:CDS | 30.0% | |
TGGTAAGTATCAAATTACGA+AGG | - | chr1.2:53090501-53090520 | MS.gene50646:CDS | 30.0% | |
TGGTTTAATAGAGTTGAGTA+AGG | - | chr1.2:53088129-53088148 | MS.gene50646:CDS | 30.0% | |
TTAGTTGCATTATCTCAATC+TGG | - | chr1.2:53091405-53091424 | MS.gene50646:intron | 30.0% | |
TTTATCATTGGAACTCATGT+TGG | - | chr1.2:53090081-53090100 | MS.gene50646:intron | 30.0% | |
TTTCACTTAAACAGGTCAAA+CGG | - | chr1.2:53088824-53088843 | MS.gene50646:CDS | 30.0% | |
TTTCTGTGTTATGCTTTGTA+AGG | + | chr1.2:53090732-53090751 | None:intergenic | 30.0% | |
TTTGAAAACCGCACTTAAAA+AGG | + | chr1.2:53088564-53088583 | None:intergenic | 30.0% | |
! | ACAGAAGAAGAAAGAACTTT+TGG | + | chr1.2:53087803-53087822 | None:intergenic | 30.0% |
! | ACTTCCTTCTACAATACTTT+TGG | + | chr1.2:53091940-53091959 | None:intergenic | 30.0% |
! | CCACTTATAAACTCATTTTC+GGG | + | chr1.2:53091730-53091749 | None:intergenic | 30.0% |
! | CCCACTTATAAACTCATTTT+CGG | + | chr1.2:53091731-53091750 | None:intergenic | 30.0% |
! | CTTCCTTCTACAATACTTTT+GGG | + | chr1.2:53091939-53091958 | None:intergenic | 30.0% |
! | TCTAAAATCCAAACTGCATA+GGG | - | chr1.2:53088087-53088106 | MS.gene50646:CDS | 30.0% |
! | TTATTCTTTTGAACTGGGAT+TGG | - | chr1.2:53089572-53089591 | MS.gene50646:CDS | 30.0% |
! | TTCACATCTTGTTTCAAACT+CGG | - | chr1.2:53090603-53090622 | MS.gene50646:CDS | 30.0% |
! | TTGGAATCATTCCTATTTTC+AGG | - | chr1.2:53089170-53089189 | MS.gene50646:CDS | 30.0% |
!! | CAAATTTCTGGTTGAGTTAA+CGG | - | chr1.2:53091152-53091171 | MS.gene50646:intron | 30.0% |
!! | CATAGCTTTGACAGTATAAT+TGG | + | chr1.2:53090227-53090246 | None:intergenic | 30.0% |
!! | CATTTCCTGTCTTTAAAACA+TGG | + | chr1.2:53090921-53090940 | None:intergenic | 30.0% |
!! | CCTTGATACATCTTTTGAAA+CGG | + | chr1.2:53090476-53090495 | None:intergenic | 30.0% |
!! | CTACAATACTTTTGGGAAAA+GGG | + | chr1.2:53091932-53091951 | None:intergenic | 30.0% |
!! | CTGTCTTTAAAACATGGATA+AGG | + | chr1.2:53090915-53090934 | None:intergenic | 30.0% |
!! | GTCTTTAAAACATGGATAAG+GGG | + | chr1.2:53090913-53090932 | None:intergenic | 30.0% |
!! | GTTGATTGCTATTGATTTGT+TGG | - | chr1.2:53087588-53087607 | MS.gene50646:intron | 30.0% |
!! | GTTGTTTCTGTGGAAAATTT+GGG | - | chr1.2:53087505-53087524 | MS.gene50646:intron | 30.0% |
!! | TACAATACTTTTGGGAAAAG+GGG | + | chr1.2:53091931-53091950 | None:intergenic | 30.0% |
!! | TCAGTCATTTTCGTAATCAA+CGG | - | chr1.2:53092107-53092126 | MS.gene50646:intron | 30.0% |
!! | TCTACAATACTTTTGGGAAA+AGG | + | chr1.2:53091933-53091952 | None:intergenic | 30.0% |
!! | TTCTAAAATCCAAACTGCAT+AGG | - | chr1.2:53088086-53088105 | MS.gene50646:CDS | 30.0% |
!! | TTGCTATTGATTTGTTGGAT+TGG | - | chr1.2:53087593-53087612 | MS.gene50646:intron | 30.0% |
!! | TTTCCCAAAAGTATTGTAGA+AGG | - | chr1.2:53091933-53091952 | MS.gene50646:intron | 30.0% |
!!! | ACCTAAAAAACTGGTTTTGT+AGG | - | chr1.2:53091762-53091781 | MS.gene50646:intron | 30.0% |
!!! | CCTAAAAAACTGGTTTTGTA+GGG | - | chr1.2:53091763-53091782 | MS.gene50646:intron | 30.0% |
!!! | CTTATCCATGTTTTAAAGAC+AGG | - | chr1.2:53090913-53090932 | MS.gene50646:intron | 30.0% |
!!! | CTTTACAATCTGGTTTTATG+GGG | - | chr1.2:53088046-53088065 | MS.gene50646:CDS | 30.0% |
!!! | GTACATTTCCTTTTTAAGTG+CGG | - | chr1.2:53088553-53088572 | MS.gene50646:CDS | 30.0% |
!!! | GTTTTAAAGACAGGAAATGA+TGG | - | chr1.2:53090922-53090941 | MS.gene50646:intron | 30.0% |
!!! | TATTTTCAGGTTCTACAAAG+TGG | - | chr1.2:53089183-53089202 | MS.gene50646:CDS | 30.0% |
!!! | TCACTTCAATTGATTCGTTT+TGG | + | chr1.2:53090681-53090700 | None:intergenic | 30.0% |
!!! | TTTGGATTTTAGAATCCGAA+CGG | + | chr1.2:53088080-53088099 | None:intergenic | 30.0% |
AAAAGGGGTTATGGAAGTAA+AGG | + | chr1.2:53091916-53091935 | None:intergenic | 35.0% | |
AAACATTATCTCATCCGATG+TGG | + | chr1.2:53088371-53088390 | None:intergenic | 35.0% | |
AACATTATCTCATCCGATGT+GGG | + | chr1.2:53088370-53088389 | None:intergenic | 35.0% | |
AATTATGCCTACATAGTTCC+AGG | - | chr1.2:53091343-53091362 | MS.gene50646:intron | 35.0% | |
ACAGAAAACCGTATCATTGT+AGG | - | chr1.2:53090745-53090764 | MS.gene50646:intron | 35.0% | |
ACAGATAAACACACGATGTT+TGG | + | chr1.2:53089536-53089555 | None:intergenic | 35.0% | |
ACCTTGCAAGGAAAATCTAA+AGG | - | chr1.2:53089835-53089854 | MS.gene50646:intron | 35.0% | |
AGAGCTATCCAAGATCTATT+AGG | - | chr1.2:53088178-53088197 | MS.gene50646:CDS | 35.0% | |
AGGTTAGAAATTGCAAGAGA+AGG | - | chr1.2:53091243-53091262 | MS.gene50646:intron | 35.0% | |
AGTAACTCTGAGCATAATAC+TGG | - | chr1.2:53090286-53090305 | MS.gene50646:intron | 35.0% | |
ATAAACCAAAGGTAGATAGG+TGG | + | chr1.2:53088500-53088519 | None:intergenic | 35.0% | |
ATACTCAACAGAAGCGATTA+AGG | + | chr1.2:53089337-53089356 | None:intergenic | 35.0% | |
ATTATTGCAGATCTTCTGGA+AGG | + | chr1.2:53088931-53088950 | None:intergenic | 35.0% | |
ATTTCGCTGCTATATTCAGA+CGG | - | chr1.2:53090793-53090812 | MS.gene50646:intron | 35.0% | |
CAATTTATTGACATGAGACG+AGG | + | chr1.2:53090647-53090666 | None:intergenic | 35.0% | |
CAGAAAACCGTATCATTGTA+GGG | - | chr1.2:53090746-53090765 | MS.gene50646:intron | 35.0% | |
CCAGAAGATCTGCAATAATA+TGG | - | chr1.2:53088932-53088951 | MS.gene50646:CDS | 35.0% | |
CCATATTATTGCAGATCTTC+TGG | + | chr1.2:53088935-53088954 | None:intergenic | 35.0% | |
CCCGAAAATGAGTTTATAAG+TGG | - | chr1.2:53091727-53091746 | MS.gene50646:intron | 35.0% | |
CCGTTTCAAAAGATGTATCA+AGG | - | chr1.2:53090473-53090492 | MS.gene50646:CDS | 35.0% | |
CTTTCGTTGTCCTTTATCAT+TGG | - | chr1.2:53090069-53090088 | MS.gene50646:intron | 35.0% | |
GAATTCCTCACCTAAAAAAC+TGG | - | chr1.2:53091753-53091772 | MS.gene50646:intron | 35.0% | |
GAGAACGGTAAAGCAAAAAT+CGG | - | chr1.2:53090991-53091010 | MS.gene50646:intron | 35.0% | |
GAGGTTATATAAAGCAGTAG+CGG | + | chr1.2:53091085-53091104 | None:intergenic | 35.0% | |
GATAAAGGACAACGAAAGTA+CGG | + | chr1.2:53090067-53090086 | None:intergenic | 35.0% | |
GATATCTCTTTCAGATCCAA+TGG | - | chr1.2:53090334-53090353 | MS.gene50646:intron | 35.0% | |
GATCTGCAATAATATGGTTG+GGG | - | chr1.2:53088938-53088957 | MS.gene50646:CDS | 35.0% | |
GCACTAACATTTCGGATTAA+AGG | + | chr1.2:53091690-53091709 | None:intergenic | 35.0% | |
GGCATATATGTCAACACAAA+AGG | - | chr1.2:53087863-53087882 | MS.gene50646:intron | 35.0% | |
GTAGTTAAGAGGTTCTCATT+CGG | - | chr1.2:53088267-53088286 | MS.gene50646:CDS | 35.0% | |
TAAAACCAGTGTACAAAACC+TGG | + | chr1.2:53091364-53091383 | None:intergenic | 35.0% | |
TACAAAACCTGGAACTATGT+AGG | + | chr1.2:53091353-53091372 | None:intergenic | 35.0% | |
TAGCAGTAGCACTAACATTT+CGG | + | chr1.2:53091698-53091717 | None:intergenic | 35.0% | |
TCAAAGCTATGATAGCAACT+TGG | - | chr1.2:53090236-53090255 | MS.gene50646:CDS | 35.0% | |
TCACTTCTGCTGTGAATATA+TGG | + | chr1.2:53090412-53090431 | None:intergenic | 35.0% | |
TTAGAAATTGCAAGAGAAGG+TGG | - | chr1.2:53091246-53091265 | MS.gene50646:intron | 35.0% | |
TTTCACCCCAAAAACCAAAA+TGG | + | chr1.2:53087639-53087658 | None:intergenic | 35.0% | |
! | TCACATCTTGTTTCAAACTC+GGG | - | chr1.2:53090604-53090623 | MS.gene50646:CDS | 35.0% |
! | TCCTTTAGATTTTCCTTGCA+AGG | + | chr1.2:53089839-53089858 | None:intergenic | 35.0% |
! | TTATTGCAGATCTTCTGGAA+GGG | + | chr1.2:53088930-53088949 | None:intergenic | 35.0% |
!! | CAGTCATTTTCGTAATCAAC+GGG | - | chr1.2:53092108-53092127 | MS.gene50646:intron | 35.0% |
!! | GGTTGTTTCTGTGGAAAATT+TGG | - | chr1.2:53087504-53087523 | MS.gene50646:intron | 35.0% |
!!! | ATGTCATTTTCATTGGGGTT+AGG | - | chr1.2:53087842-53087861 | MS.gene50646:intron | 35.0% |
!!! | CAAAACCAGTTTTTTAGGTG+AGG | + | chr1.2:53091761-53091780 | None:intergenic | 35.0% |
!!! | CCCTACAAAACCAGTTTTTT+AGG | + | chr1.2:53091766-53091785 | None:intergenic | 35.0% |
!!! | TGTACACTGGTTTTACAAGA+AGG | - | chr1.2:53091369-53091388 | MS.gene50646:intron | 35.0% |
!!! | TTTTTGTTGGGTTGTTTCTG+TGG | - | chr1.2:53087495-53087514 | MS.gene50646:intron | 35.0% |
AAAATCCAAACTGCATAGGG+TGG | - | chr1.2:53088090-53088109 | MS.gene50646:CDS | 40.0% | |
AAAGCTCGAATAGTTCAAGC+TGG | - | chr1.2:53091123-53091142 | MS.gene50646:intron | 40.0% | |
AAATCCAAACTGCATAGGGT+GGG | - | chr1.2:53088091-53088110 | MS.gene50646:CDS | 40.0% | |
AAGGAAAGATTGAACGCTGA+AGG | - | chr1.2:53089923-53089942 | MS.gene50646:intron | 40.0% | |
AGACAACAAGGCCTTGATTA+TGG | - | chr1.2:53090870-53090889 | MS.gene50646:intron | 40.0% | |
AGAGACAATCCATCCAAAAG+TGG | - | chr1.2:53090137-53090156 | MS.gene50646:intron | 40.0% | |
AGAGACTATTGCTGTGGAAA+AGG | - | chr1.2:53089904-53089923 | MS.gene50646:intron | 40.0% | |
AGATCCAATGGAGAATGCAA+TGG | - | chr1.2:53090346-53090365 | MS.gene50646:intron | 40.0% | |
AGATGATACTGAACCTTGCA+AGG | - | chr1.2:53089823-53089842 | MS.gene50646:intron | 40.0% | |
AGGAACACTTAGAGGAAAGA+AGG | - | chr1.2:53091056-53091075 | MS.gene50646:intron | 40.0% | |
ATATGCGTGTTAACGAAGCA+AGG | - | chr1.2:53089051-53089070 | MS.gene50646:CDS | 40.0% | |
ATCCAAAAGTGGCTTGATCA+TGG | - | chr1.2:53090148-53090167 | MS.gene50646:intron | 40.0% | |
ATGCTTTAATTGCACCGGAA+CGG | + | chr1.2:53091017-53091036 | None:intergenic | 40.0% | |
ATTTCCAGACTCTACAATGG+TGG | - | chr1.2:53087900-53087919 | MS.gene50646:intron | 40.0% | |
CAAGAGCAAAGGAAAAGGTA+TGG | - | chr1.2:53091433-53091452 | MS.gene50646:intron | 40.0% | |
CAATTCCACCTATCTACCTT+TGG | - | chr1.2:53088492-53088511 | MS.gene50646:CDS | 40.0% | |
CATGTTGGATCCTGTTATTG+TGG | - | chr1.2:53090096-53090115 | MS.gene50646:intron | 40.0% | |
CTATCTCAACCCTACAAAAC+CGG | + | chr1.2:53088435-53088454 | None:intergenic | 40.0% | |
CTCAGAGTTACTAGAACTGT+TGG | + | chr1.2:53090278-53090297 | None:intergenic | 40.0% | |
CTGTGAATCTTGCTCATCTT+TGG | + | chr1.2:53089098-53089117 | None:intergenic | 40.0% | |
CTGTGCGATTTCACTTAAAC+AGG | - | chr1.2:53088816-53088835 | MS.gene50646:CDS | 40.0% | |
CTTGAAAGAGACTATTGCTG+TGG | - | chr1.2:53089898-53089917 | MS.gene50646:intron | 40.0% | |
CTTGCATGAAGAGAAACTTG+TGG | - | chr1.2:53088623-53088642 | MS.gene50646:CDS | 40.0% | |
GACCTGACTCTTTATAACAC+AGG | + | chr1.2:53087992-53088011 | None:intergenic | 40.0% | |
GACCTGTGTTATAAAGAGTC+AGG | - | chr1.2:53087987-53088006 | MS.gene50646:intron | 40.0% | |
GAGTACTTTGCAGTCAAAAG+TGG | - | chr1.2:53090028-53090047 | MS.gene50646:intron | 40.0% | |
GATAGGTGGAATTGACATGA+AGG | + | chr1.2:53088486-53088505 | None:intergenic | 40.0% | |
GTAAGTCTTTGACGAGTCTT+TGG | + | chr1.2:53090187-53090206 | None:intergenic | 40.0% | |
GTAGCCCTTACTTTACAATC+TGG | - | chr1.2:53088036-53088055 | MS.gene50646:intron | 40.0% | |
TACTCCAAGAGCAAAGGAAA+AGG | - | chr1.2:53091428-53091447 | MS.gene50646:intron | 40.0% | |
TATGCGTGTTAACGAAGCAA+GGG | - | chr1.2:53089052-53089071 | MS.gene50646:CDS | 40.0% | |
TCACATAATCACGTAAGACG+CGG | + | chr1.2:53090000-53090019 | None:intergenic | 40.0% | |
TCCAAAAGTGGCTTGATCAT+GGG | - | chr1.2:53090149-53090168 | MS.gene50646:intron | 40.0% | |
TCCACTCATAAGCATAGCAA+AGG | + | chr1.2:53091475-53091494 | None:intergenic | 40.0% | |
TCTATTCAGCCTCTCTGTAA+TGG | - | chr1.2:53090969-53090988 | MS.gene50646:intron | 40.0% | |
TCTCAAGAAGGAAACAGCAA+TGG | - | chr1.2:53089769-53089788 | MS.gene50646:intron | 40.0% | |
TGAGATAATGCAACTAAGGG+AGG | + | chr1.2:53091402-53091421 | None:intergenic | 40.0% | |
TGAGGAGAGGTTGTAAAGAA+GGG | - | chr1.2:53087660-53087679 | MS.gene50646:intron | 40.0% | |
TGCATTTCCAGACTCTACAA+TGG | - | chr1.2:53087897-53087916 | MS.gene50646:intron | 40.0% | |
TGTTGAATCAGGTTCTCAGA+GGG | - | chr1.2:53091290-53091309 | MS.gene50646:intron | 40.0% | |
TTCCGGTGCAATTAAAGCAT+TGG | - | chr1.2:53091017-53091036 | MS.gene50646:intron | 40.0% | |
TTGTCTCTCGTATGTTTGAC+CGG | + | chr1.2:53090125-53090144 | None:intergenic | 40.0% | |
TTGTTGAATCAGGTTCTCAG+AGG | - | chr1.2:53091289-53091308 | MS.gene50646:intron | 40.0% | |
TTTATTGACATGAGACGAGG+TGG | + | chr1.2:53090644-53090663 | None:intergenic | 40.0% | |
TTTCCAGACTCTACAATGGT+GGG | - | chr1.2:53087901-53087920 | MS.gene50646:intron | 40.0% | |
TTTCGCTGCTATATTCAGAC+GGG | - | chr1.2:53090794-53090813 | MS.gene50646:intron | 40.0% | |
! | ACAAAACCGGCTTAAAGTGA+GGG | + | chr1.2:53088422-53088441 | None:intergenic | 40.0% |
! | ACTTTTGCAGCACTATATCC+AGG | - | chr1.2:53089736-53089755 | MS.gene50646:intron | 40.0% |
! | CATACCTTTTCCTTTGCTCT+TGG | + | chr1.2:53091435-53091454 | None:intergenic | 40.0% |
! | CTTGTTGTAAACATTCACGC+AGG | - | chr1.2:53092072-53092091 | MS.gene50646:intron | 40.0% |
! | TACAAAACCGGCTTAAAGTG+AGG | + | chr1.2:53088423-53088442 | None:intergenic | 40.0% |
! | TATGGGGTTTTTATGCCGTT+CGG | - | chr1.2:53088062-53088081 | MS.gene50646:CDS | 40.0% |
! | TCCTTTGCTATGCTTATGAG+TGG | - | chr1.2:53091471-53091490 | MS.gene50646:intron | 40.0% |
! | TGTTCAACATGTGTCGCTAT+CGG | + | chr1.2:53091658-53091677 | None:intergenic | 40.0% |
! | TTCTTTTGAACTGGGATTGG+CGG | - | chr1.2:53089575-53089594 | MS.gene50646:CDS | 40.0% |
!! | AAAGATGTATCAAGGGTGTC+TGG | - | chr1.2:53090481-53090500 | MS.gene50646:CDS | 40.0% |
!! | ACTTTTGGGAAAAGGGGTTA+TGG | + | chr1.2:53091925-53091944 | None:intergenic | 40.0% |
!! | CACTTTAAGCCGGTTTTGTA+GGG | - | chr1.2:53088423-53088442 | MS.gene50646:CDS | 40.0% |
!! | GAAGTTCTGATCCTTTTGTC+TGG | - | chr1.2:53091955-53091974 | MS.gene50646:intron | 40.0% |
!! | TAGTTCCAGGTTTTGTACAC+TGG | - | chr1.2:53091356-53091375 | MS.gene50646:intron | 40.0% |
!! | TATGATAGCAACTTGGTGTG+AGG | - | chr1.2:53090243-53090262 | MS.gene50646:CDS | 40.0% |
!! | TCACTTTAAGCCGGTTTTGT+AGG | - | chr1.2:53088422-53088441 | MS.gene50646:CDS | 40.0% |
!! | TTTCGGATTAAAGGAGTGTC+CGG | + | chr1.2:53091681-53091700 | None:intergenic | 40.0% |
!!! | ATGATCAAGCCACTTTTGGA+TGG | + | chr1.2:53090149-53090168 | None:intergenic | 40.0% |
!!! | TGGTTTTGTAGGGTTGAGTT+CGG | - | chr1.2:53091773-53091792 | MS.gene50646:intron | 40.0% |
AAAGCAAAAATCGGCCGTTC+CGG | - | chr1.2:53091000-53091019 | MS.gene50646:intron | 45.0% | |
AACTGTTGCCACTCTGTAGT+TGG | - | chr1.2:53089479-53089498 | MS.gene50646:CDS | 45.0% | |
AAGGCCTTGATTATGGAAGC+GGG | - | chr1.2:53090877-53090896 | MS.gene50646:intron | 45.0% | |
AGCTGGAGCTGTCAAATTTC+TGG | - | chr1.2:53091140-53091159 | MS.gene50646:intron | 45.0% | |
AGGCCATATCTCATCTAGTG+TGG | + | chr1.2:53091525-53091544 | None:intergenic | 45.0% | |
AGGGCATAGGTTTCACTGTT+TGG | + | chr1.2:53088911-53088930 | None:intergenic | 45.0% | |
ATCTGGTACTCCAAGAGCAA+AGG | - | chr1.2:53091422-53091441 | MS.gene50646:intron | 45.0% | |
CAAGGCCTTGATTATGGAAG+CGG | - | chr1.2:53090876-53090895 | MS.gene50646:intron | 45.0% | |
CACACTGCCCTACAATGATA+CGG | + | chr1.2:53090756-53090775 | None:intergenic | 45.0% | |
CACTCTGTAGTTGGAGACAT+GGG | - | chr1.2:53089488-53089507 | MS.gene50646:CDS | 45.0% | |
CAGGTATGTGCAAAGTTGGA+AGG | - | chr1.2:53089306-53089325 | MS.gene50646:CDS | 45.0% | |
CGCCAATGCTTTAATTGCAC+CGG | + | chr1.2:53091022-53091041 | None:intergenic | 45.0% | |
CTCAACAGAAGCGATTAAGG+AGG | + | chr1.2:53089334-53089353 | None:intergenic | 45.0% | |
CTGAGGAGAGGTTGTAAAGA+AGG | - | chr1.2:53087659-53087678 | MS.gene50646:intron | 45.0% | |
CTTCCAACTTTGCACATACC+TGG | + | chr1.2:53089308-53089327 | None:intergenic | 45.0% | |
CTTTCCTCTAAGTGTTCCTG+AGG | + | chr1.2:53091055-53091074 | None:intergenic | 45.0% | |
GAAGCAGCTACTACCACAAA+GGG | - | chr1.2:53092130-53092149 | MS.gene50646:intron | 45.0% | |
GATCCTGTTATTGTGGCTTC+CGG | - | chr1.2:53090103-53090122 | MS.gene50646:intron | 45.0% | |
GCATCCATTGCATTCTCCAT+TGG | + | chr1.2:53090353-53090372 | None:intergenic | 45.0% | |
GGAACTTCAGTGTCTCAAGA+AGG | - | chr1.2:53089757-53089776 | MS.gene50646:intron | 45.0% | |
GGCCATATCTCATCTAGTGT+GGG | + | chr1.2:53091524-53091543 | None:intergenic | 45.0% | |
GTATCATTGTAGGGCAGTGT+GGG | - | chr1.2:53090755-53090774 | MS.gene50646:intron | 45.0% | |
GTCAAACCTGTCGACAATTG+CGG | - | chr1.2:53091215-53091234 | MS.gene50646:intron | 45.0% | |
GTCCCACACTAGATGAGATA+TGG | - | chr1.2:53091519-53091538 | MS.gene50646:intron | 45.0% | |
GTGGGAAAAGAAACAGTCTC+TGG | - | chr1.2:53088109-53088128 | MS.gene50646:CDS | 45.0% | |
GTTGAATCAGGTTCTCAGAG+GGG | - | chr1.2:53091291-53091310 | MS.gene50646:intron | 45.0% | |
TACCGTTCTCCATTACAGAG+AGG | + | chr1.2:53090981-53091000 | None:intergenic | 45.0% | |
TAGCGACACATGTTGAACAC+CGG | - | chr1.2:53091659-53091678 | MS.gene50646:intron | 45.0% | |
TATCATTGTAGGGCAGTGTG+GGG | - | chr1.2:53090756-53090775 | MS.gene50646:intron | 45.0% | |
TCCATAACATCGTCGAGTAC+TGG | + | chr1.2:53088981-53089000 | None:intergenic | 45.0% | |
TCTTGAGACACTGAAGTTCC+TGG | + | chr1.2:53089757-53089776 | None:intergenic | 45.0% | |
TGCCAATGGAATGGTTGACA+AGG | - | chr1.2:53091179-53091198 | MS.gene50646:intron | 45.0% | |
TGTCGACAGGTTTGACAGAA+CGG | + | chr1.2:53091211-53091230 | None:intergenic | 45.0% | |
TGTCTGCGTCTTTGCTTCAT+AGG | + | chr1.2:53091545-53091564 | None:intergenic | 45.0% | |
TTAGCCAAAACCGATGCAGA+TGG | + | chr1.2:53089282-53089301 | None:intergenic | 45.0% | |
TTGTCAACCATTCCATTGGC+AGG | + | chr1.2:53091180-53091199 | None:intergenic | 45.0% | |
! | AAAGGACAACGAAAGTACGG+AGG | + | chr1.2:53090064-53090083 | None:intergenic | 45.0% |
! | AAGGACAACGAAAGTACGGA+GGG | + | chr1.2:53090063-53090082 | None:intergenic | 45.0% |
! | AGCCTCTCTGTAATGGAGAA+CGG | - | chr1.2:53090976-53090995 | MS.gene50646:intron | 45.0% |
! | AGCCTTGTCAACCATTCCAT+TGG | + | chr1.2:53091184-53091203 | None:intergenic | 45.0% |
! | TGACAATGCCTCTTGCTGTA+CGG | - | chr1.2:53089370-53089389 | MS.gene50646:CDS | 45.0% |
! | TTTTCCCACCCTATGCAGTT+TGG | + | chr1.2:53088098-53088117 | None:intergenic | 45.0% |
!! | CGGTGCAATTAAAGCATTGG+CGG | - | chr1.2:53091020-53091039 | MS.gene50646:intron | 45.0% |
!!! | TGGTTTTTGGGGTGAAACTG+AGG | - | chr1.2:53087642-53087661 | MS.gene50646:intron | 45.0% |
AAACCTGTCGACAATTGCGG+AGG | - | chr1.2:53091218-53091237 | MS.gene50646:intron | 50.0% | |
AACCTGTCGACAATTGCGGA+GGG | - | chr1.2:53091219-53091238 | MS.gene50646:intron | 50.0% | |
AACGGATCCTGCCAATGGAA+TGG | - | chr1.2:53091170-53091189 | MS.gene50646:intron | 50.0% | |
AGAGTCACCACCATCTGCAT+CGG | - | chr1.2:53089269-53089288 | MS.gene50646:CDS | 50.0% | |
AGGCATCCCTCACTTTAAGC+CGG | - | chr1.2:53088413-53088432 | MS.gene50646:CDS | 50.0% | |
AGGCCTTGATTATGGAAGCG+GGG | - | chr1.2:53090878-53090897 | MS.gene50646:intron | 50.0% | |
ATCAGGTTCTCAGAGGGGAA+AGG | - | chr1.2:53091296-53091315 | MS.gene50646:intron | 50.0% | |
CCAACTTTGCACATACCTGG+AGG | + | chr1.2:53089305-53089324 | None:intergenic | 50.0% | |
CCACTCTGTAGTTGGAGACA+TGG | - | chr1.2:53089487-53089506 | MS.gene50646:CDS | 50.0% | |
CCATGTCTCCAACTACAGAG+TGG | + | chr1.2:53089490-53089509 | None:intergenic | 50.0% | |
CCTCCAGGTATGTGCAAAGT+TGG | - | chr1.2:53089302-53089321 | MS.gene50646:CDS | 50.0% | |
CGTATCATTGTAGGGCAGTG+TGG | - | chr1.2:53090754-53090773 | MS.gene50646:intron | 50.0% | |
CTACTGCTGCAGAAGAACTG+AGG | - | chr1.2:53090704-53090723 | MS.gene50646:intron | 50.0% | |
CTTGCCTCAGGAACACTTAG+AGG | - | chr1.2:53091048-53091067 | MS.gene50646:intron | 50.0% | |
GATGCGGGAGGGATAGAAAA+TGG | - | chr1.2:53090535-53090554 | MS.gene50646:CDS | 50.0% | |
GCCAGTACTCGACGATGTTA+TGG | - | chr1.2:53088977-53088996 | MS.gene50646:CDS | 50.0% | |
GCGGATGGCCTAATAGATCT+TGG | + | chr1.2:53088189-53088208 | None:intergenic | 50.0% | |
GGAAGCAGCTACTACCACAA+AGG | - | chr1.2:53092129-53092148 | MS.gene50646:intron | 50.0% | |
GTGTGTTAGGAGTCCCACAT+CGG | - | chr1.2:53088354-53088373 | MS.gene50646:CDS | 50.0% | |
TCTAGTGCTCAGCGTGTGTT+AGG | - | chr1.2:53088341-53088360 | MS.gene50646:CDS | 50.0% | |
TCTCCCACCATTGTAGAGTC+TGG | + | chr1.2:53087907-53087926 | None:intergenic | 50.0% | |
TGAAGCAAAGACGCAGACAC+TGG | - | chr1.2:53091546-53091565 | MS.gene50646:intron | 50.0% | |
TGACCGGAAGCCACAATAAC+AGG | + | chr1.2:53090109-53090128 | None:intergenic | 50.0% | |
TGGTGGGAGAGATGCATAGT+GGG | - | chr1.2:53087917-53087936 | MS.gene50646:intron | 50.0% | |
TTCTATCCCTCCCGCATCTA+CGG | + | chr1.2:53090533-53090552 | None:intergenic | 50.0% | |
! | ATGGTGGGAGAGATGCATAG+TGG | - | chr1.2:53087916-53087935 | MS.gene50646:intron | 50.0% |
! | CAGATCTTCTGGAAGGGCAT+AGG | + | chr1.2:53088924-53088943 | None:intergenic | 50.0% |
! | CCTCTTGCTGTACGGTTTAG+GGG | - | chr1.2:53089378-53089397 | MS.gene50646:CDS | 50.0% |
! | GACAGGAAATGATGGTGCCA+AGG | - | chr1.2:53090930-53090949 | MS.gene50646:intron | 50.0% |
! | GAGTTAACGGATCCTGCCAA+TGG | - | chr1.2:53091165-53091184 | MS.gene50646:intron | 50.0% |
! | GCCTCTTGCTGTACGGTTTA+GGG | - | chr1.2:53089377-53089396 | MS.gene50646:CDS | 50.0% |
! | GGACATCTGGAGCATAACCA+GGG | + | chr1.2:53088219-53088238 | None:intergenic | 50.0% |
! | TGCAGATGGTGGTGACTCTA+AGG | + | chr1.2:53089268-53089287 | None:intergenic | 50.0% |
! | TGCCTCTTGCTGTACGGTTT+AGG | - | chr1.2:53089376-53089395 | MS.gene50646:CDS | 50.0% |
! | TGGACATCTGGAGCATAACC+AGG | + | chr1.2:53088220-53088239 | None:intergenic | 50.0% |
! | TGGTGCCAAGGAGAATTCTG+CGG | - | chr1.2:53090942-53090961 | MS.gene50646:intron | 50.0% |
! | TTTGGGGTGAAACTGAGGAG+AGG | - | chr1.2:53087647-53087666 | MS.gene50646:intron | 50.0% |
!! | GCCCATGATCAAGCCACTTT+TGG | + | chr1.2:53090153-53090172 | None:intergenic | 50.0% |
!!! | ACCACCATCTGCATCGGTTT+TGG | - | chr1.2:53089275-53089294 | MS.gene50646:CDS | 50.0% |
!!! | ATCGGTTTTGGCTAACCTCC+AGG | - | chr1.2:53089287-53089306 | MS.gene50646:CDS | 50.0% |
AGCCCCCGCTTCCATAATCA+AGG | + | chr1.2:53090884-53090903 | None:intergenic | 55.0% | |
AGCTGCCGCAGAATTCTCCT+TGG | + | chr1.2:53090950-53090969 | None:intergenic | 55.0% | |
ATGCTCCAGATGTCCAGTCC+TGG | - | chr1.2:53088224-53088243 | MS.gene50646:CDS | 55.0% | |
CCCCTAAACCGTACAGCAAG+AGG | + | chr1.2:53089381-53089400 | None:intergenic | 55.0% | |
CGACACGACATAGCCACATG+TGG | + | chr1.2:53091631-53091650 | None:intergenic | 55.0% | |
GCCAAAACCGATGCAGATGG+TGG | + | chr1.2:53089279-53089298 | None:intergenic | 55.0% | |
GGCCTTGATTATGGAAGCGG+GGG | - | chr1.2:53090879-53090898 | MS.gene50646:intron | 55.0% | |
TGCTCCAGATGTCCAGTCCT+GGG | - | chr1.2:53088225-53088244 | MS.gene50646:CDS | 55.0% | |
TGTCGACAATTGCGGAGGGA+AGG | - | chr1.2:53091223-53091242 | MS.gene50646:intron | 55.0% | |
TTCCCTCCGCAATTGTCGAC+AGG | + | chr1.2:53091224-53091243 | None:intergenic | 55.0% | |
TTGGCGGAACTTCTTGCCTC+AGG | - | chr1.2:53091036-53091055 | MS.gene50646:intron | 55.0% | |
! | CATCTGGAGCATAACCAGGG+AGG | + | chr1.2:53088216-53088235 | None:intergenic | 55.0% |
! | GCATAACCAGGGAGGCATAG+CGG | + | chr1.2:53088208-53088227 | None:intergenic | 55.0% |
!! | AAGGTGTCGTCCGTAGATGC+GGG | - | chr1.2:53090520-53090539 | MS.gene50646:CDS | 55.0% |
!! | GAAGGTGTCGTCCGTAGATG+CGG | - | chr1.2:53090519-53090538 | MS.gene50646:CDS | 55.0% |
TGTCGTCCGTAGATGCGGGA+GGG | - | chr1.2:53090524-53090543 | MS.gene50646:CDS | 60.0% | |
! | AACCAGGGAGGCATAGCGGA+TGG | + | chr1.2:53088204-53088223 | None:intergenic | 60.0% |
CACGCCCAGGACTGGACATC+TGG | + | chr1.2:53088232-53088251 | None:intergenic | 65.0% | |
GGGGGTGGGGGGTAGTTAAG+AGG | - | chr1.2:53088256-53088275 | MS.gene50646:CDS | 65.0% | |
GTCCAGTCCTGGGCGTGTGA+GGG | - | chr1.2:53088235-53088254 | MS.gene50646:CDS | 65.0% | |
GTGTCGTCCGTAGATGCGGG+AGG | - | chr1.2:53090523-53090542 | MS.gene50646:CDS | 65.0% | |
TCCAGTCCTGGGCGTGTGAG+GGG | - | chr1.2:53088236-53088255 | MS.gene50646:CDS | 65.0% | |
TGTCCAGTCCTGGGCGTGTG+AGG | - | chr1.2:53088234-53088253 | MS.gene50646:CDS | 65.0% | |
CAGTCCTGGGCGTGTGAGGG+GGG | - | chr1.2:53088238-53088257 | MS.gene50646:CDS | 70.0% | |
CCAGTCCTGGGCGTGTGAGG+GGG | - | chr1.2:53088237-53088256 | MS.gene50646:CDS | 70.0% | |
GGCCATCCGCTATGCCTCCC+TGG | - | chr1.2:53088199-53088218 | MS.gene50646:CDS | 70.0% | |
CCCCCTCACACGCCCAGGAC+TGG | + | chr1.2:53088240-53088259 | None:intergenic | 75.0% | |
CCTGGGCGTGTGAGGGGGGT+GGG | - | chr1.2:53088242-53088261 | MS.gene50646:CDS | 75.0% | |
CTGGGCGTGTGAGGGGGGTG+GGG | - | chr1.2:53088243-53088262 | MS.gene50646:CDS | 75.0% | |
TCCTGGGCGTGTGAGGGGGG+TGG | - | chr1.2:53088241-53088260 | MS.gene50646:CDS | 75.0% | |
TGGGCGTGTGAGGGGGGTGG+GGG | - | chr1.2:53088244-53088263 | MS.gene50646:CDS | 75.0% | |
! | CCCACCCCCCTCACACGCCC+AGG | + | chr1.2:53088245-53088264 | None:intergenic | 80.0% |
! | GGGCGTGTGAGGGGGGTGGG+GGG | - | chr1.2:53088245-53088264 | MS.gene50646:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 53087326 | 53092162 | 53087326 | ID=MS.gene50646 |
chr1.2 | mRNA | 53087326 | 53092162 | 53087326 | ID=MS.gene50646.t1;Parent=MS.gene50646 |
chr1.2 | exon | 53092153 | 53092162 | 53092153 | ID=MS.gene50646.t1.exon1;Parent=MS.gene50646.t1 |
chr1.2 | CDS | 53092153 | 53092162 | 53092153 | ID=cds.MS.gene50646.t1;Parent=MS.gene50646.t1 |
chr1.2 | exon | 53090370 | 53090650 | 53090370 | ID=MS.gene50646.t1.exon2;Parent=MS.gene50646.t1 |
chr1.2 | CDS | 53090370 | 53090650 | 53090370 | ID=cds.MS.gene50646.t1;Parent=MS.gene50646.t1 |
chr1.2 | exon | 53090180 | 53090296 | 53090180 | ID=MS.gene50646.t1.exon3;Parent=MS.gene50646.t1 |
chr1.2 | CDS | 53090180 | 53090296 | 53090180 | ID=cds.MS.gene50646.t1;Parent=MS.gene50646.t1 |
chr1.2 | exon | 53088039 | 53089742 | 53088039 | ID=MS.gene50646.t1.exon4;Parent=MS.gene50646.t1 |
chr1.2 | CDS | 53088039 | 53089742 | 53088039 | ID=cds.MS.gene50646.t1;Parent=MS.gene50646.t1 |
chr1.2 | exon | 53087326 | 53087394 | 53087326 | ID=MS.gene50646.t1.exon5;Parent=MS.gene50646.t1 |
chr1.2 | CDS | 53087326 | 53087394 | 53087326 | ID=cds.MS.gene50646.t1;Parent=MS.gene50646.t1 |
Gene Sequence |
Protein sequence |