AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50959

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50959.t1 MTR_7g076080 98.128 748 14 0 1 748 31 778 0.0 1529
MS.gene50959.t1 MTR_8g432540 80.577 762 122 10 1 748 61 810 0.0 1238
MS.gene50959.t1 MTR_1g101280 64.219 749 230 9 23 745 15 751 0.0 950
MS.gene50959.t1 MTR_4g047800 53.947 760 309 13 1 748 3 733 0.0 776
MS.gene50959.t1 MTR_2g088470 54.521 752 307 14 7 747 8 735 0.0 775
MS.gene50959.t1 MTR_0198s0030 52.157 765 310 18 14 744 9 751 0.0 766
MS.gene50959.t1 MTR_6g477820 48.945 711 328 11 61 748 29 727 0.0 660
MS.gene50959.t1 MTR_5g029320 43.576 755 370 20 25 748 52 781 0.0 602
MS.gene50959.t1 MTR_2g101720 43.169 688 348 7 65 747 143 792 0.0 600
MS.gene50959.t1 MTR_5g005600 42.934 743 374 18 16 744 10 716 0.0 542
MS.gene50959.t1 MTR_7g427710 42.897 711 307 17 55 746 10 640 3.93e-178 524
MS.gene50959.t1 MTR_2g030570 34.545 715 438 13 37 744 4 695 6.43e-135 415
MS.gene50959.t1 MTR_2g030600 33.801 713 439 14 37 744 4 688 2.55e-127 395
MS.gene50959.t1 MTR_2g030660 31.921 708 408 22 48 744 3 647 1.58e-99 321
MS.gene50959.t1 MTR_7g427690 43.077 390 194 8 255 636 57 426 1.38e-97 310
MS.gene50959.t1 MTR_2g083350 34.659 528 294 11 259 748 21 535 6.02e-88 288
MS.gene50959.t1 MTR_2g083330 32.634 524 305 8 260 748 19 529 6.82e-81 268
MS.gene50959.t1 MTR_7g427700 39.198 324 137 5 55 372 10 279 9.56e-64 219
MS.gene50959.t1 MTR_7g427700 44.444 162 71 5 595 746 281 433 1.53e-29 122
MS.gene50959.t1 MTR_0653s0020 40.376 213 108 5 438 648 1 196 1.54e-45 162
MS.gene50959.t1 MTR_5g046040 49.645 141 70 1 61 200 33 173 2.33e-40 152
MS.gene50959.t1 MTR_7g027265 55.833 120 53 0 61 180 17 136 3.52e-40 144
MS.gene50959.t1 MTR_2g030690 31.399 293 176 10 461 744 1 277 1.88e-27 113
MS.gene50959.t1 MTR_1g105420 32.432 222 95 8 116 314 1 190 6.08e-24 100
MS.gene50959.t1 MTR_0653s0010 49.593 123 45 4 634 746 1 116 2.88e-23 95.9
MS.gene50959.t1 MTR_2g451350 36.029 136 77 2 267 397 1 131 6.64e-22 92.8
MS.gene50959.t1 MTR_7g027605 49.462 93 44 2 343 435 2 91 2.37e-21 89.4
MS.gene50959.t1 MTR_2g101190 21.401 785 425 30 37 744 2 671 1.09e-20 97.8
MS.gene50959.t1 MTR_6g027290 29.885 174 114 3 44 212 4 174 8.55e-20 87.8
MS.gene50959.t1 MTR_7g427670 42.222 90 40 2 115 203 32 110 6.86e-14 69.3
MS.gene50959.t1 MTR_2g451350 33.333 75 50 0 323 397 18 92 2.79e-11 60.8
MS.gene50959.t1 MTR_3g109800 21.730 497 291 19 317 744 205 672 6.62e-11 66.2
MS.gene50959.t1 MTR_3g109800 21.932 497 290 20 317 744 205 672 7.25e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50959.t1 AT4G00730 72.853 722 175 9 27 748 102 802 0.0 1048
MS.gene50959.t1 AT3G61150 66.227 758 219 11 15 748 63 807 0.0 1003
MS.gene50959.t1 AT4G04890 54.206 749 275 12 39 747 18 738 0.0 787
MS.gene50959.t1 AT4G04890 54.206 749 275 12 39 747 18 738 0.0 787
MS.gene50959.t1 AT4G21750 54.980 733 264 11 54 747 55 760 0.0 770
MS.gene50959.t1 AT4G21750 54.980 733 264 11 54 747 55 760 0.0 770
MS.gene50959.t1 AT4G21750 54.980 733 264 11 54 747 55 760 0.0 770
MS.gene50959.t1 AT4G21750 54.980 733 264 11 54 747 55 760 0.0 770
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 308 13 20 748 23 720 0.0 761
MS.gene50959.t1 AT1G05230 52.869 732 306 14 20 748 23 718 0.0 756
MS.gene50959.t1 AT5G52170 52.982 721 268 13 31 745 24 679 0.0 740
MS.gene50959.t1 AT5G52170 52.982 721 268 13 31 745 24 679 0.0 740
MS.gene50959.t1 AT5G52170 52.617 726 268 14 31 745 24 684 0.0 733
MS.gene50959.t1 AT4G00730 70.378 476 122 8 27 502 102 558 0.0 671
MS.gene50959.t1 AT1G73360 47.783 699 333 10 61 744 32 713 0.0 626
MS.gene50959.t1 AT1G17920 46.143 700 324 14 64 748 24 685 0.0 611
MS.gene50959.t1 AT1G17920 46.143 700 324 14 64 748 24 685 0.0 611
MS.gene50959.t1 AT1G05230 51.067 609 267 12 20 625 23 603 0.0 607
MS.gene50959.t1 AT2G32370 43.966 696 343 11 61 748 68 724 0.0 575
MS.gene50959.t1 AT1G79840 41.917 699 346 12 58 747 98 745 0.0 560
MS.gene50959.t1 AT1G79840 41.917 699 346 12 58 747 40 687 0.0 559
MS.gene50959.t1 AT1G79840 41.917 699 346 12 58 747 40 687 0.0 559
MS.gene50959.t1 AT1G79840 41.917 699 346 12 58 747 127 774 0.0 559
MS.gene50959.t1 AT5G46880 41.783 718 376 18 54 744 104 806 1.33e-175 524
MS.gene50959.t1 AT5G46880 41.783 718 376 18 54 744 104 806 1.33e-175 524
MS.gene50959.t1 AT5G46880 41.783 718 376 18 54 744 104 806 1.33e-175 524
MS.gene50959.t1 AT4G25530 39.636 714 371 17 43 748 25 686 6.07e-162 484
MS.gene50959.t1 AT1G79840 41.549 568 283 9 58 621 98 620 8.29e-155 464
MS.gene50959.t1 AT4G17710 39.971 698 329 18 59 744 84 703 8.37e-150 454
MS.gene50959.t1 AT3G03260 36.376 734 397 20 43 746 3 696 1.15e-141 432
MS.gene50959.t1 AT5G17320 34.953 741 417 21 43 747 7 718 2.23e-126 393
MS.gene50959.t1 AT1G34650 34.459 711 410 21 68 747 23 708 9.84e-116 365
MS.gene50959.t1 AT1G79840 40.583 446 218 7 58 500 98 499 4.65e-109 342
MS.gene50959.t1 AT3G03260 35.273 567 320 15 43 593 3 538 6.97e-104 329
MS.gene50959.t1 AT5G07260 27.273 561 324 16 127 682 10 491 4.90e-54 196
MS.gene50959.t1 AT5G07260 27.370 559 321 16 127 682 10 486 1.45e-53 194
MS.gene50959.t1 AT4G26920 24.342 456 254 18 267 716 72 442 9.62e-22 99.8
MS.gene50959.t1 AT1G30490 40.000 100 53 3 49 144 6 102 8.63e-13 72.4

Find 176 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGTGTTCTTCTATTT+TGG 0.092193 7.1:-27170029 None:intergenic
GGCTCTTGTTGAAACTTTAA+TGG 0.179447 7.1:+27170935 MS.gene50959:CDS
CAGTTGTAGAGCACCATTTC+TGG 0.218972 7.1:-27171503 None:intergenic
ATGCCTTTAGGTCAAGATTT+TGG 0.233318 7.1:+27170603 MS.gene50959:CDS
CTAAGCTTAGGCATGGGTTT+TGG 0.241414 7.1:+27174186 MS.gene50959:CDS
TCAAACCATTATTTGTTTGA+TGG 0.255996 7.1:-27169666 None:intergenic
GAGTTTGGTAACGACGTAAT+TGG 0.264874 7.1:-27170531 None:intergenic
GTGATATCTAGTGGAATAAA+TGG 0.274598 7.1:+27171478 MS.gene50959:CDS
CACAAACTAATGAGCCTCTT+TGG 0.274681 7.1:+27170769 MS.gene50959:CDS
GATAACATGGATGGTATTTC+TGG 0.280364 7.1:+27169736 MS.gene50959:CDS
AATTTCCATCAAACAAATAA+TGG 0.293878 7.1:+27169661 MS.gene50959:CDS
AGCTTCTCTGATGGTATCTA+TGG 0.310496 7.1:-27171777 None:intergenic
ACACTTGCCGGCAAGTTTCT+AGG 0.314978 7.1:+27170504 MS.gene50959:CDS
AAACAAGACAAGTCAAGTTT+TGG 0.322654 7.1:+27170004 MS.gene50959:CDS
GGAATGTGGGCGAGGACGTT+AGG 0.329094 7.1:+27174549 MS.gene50959:CDS
ACTTAGCAAAAGGCTTTGTT+TGG 0.341498 7.1:+27169981 MS.gene50959:CDS
CCAGTTTCTAAACTCGAGTT+TGG 0.349356 7.1:-27170546 None:intergenic
TATGTTTCTTGAACTTGCTT+TGG 0.349553 7.1:+27170719 MS.gene50959:CDS
AACTGTAGGAGGCTTCCTTC+TGG 0.355417 7.1:+27171824 MS.gene50959:CDS
TTGCCTTCAACAATGCCTTT+AGG 0.357400 7.1:+27170591 MS.gene50959:CDS
GACCGAGTTTGTACACTTGC+CGG 0.358469 7.1:+27170492 MS.gene50959:CDS
TTCATTACTACATGCATTGC+GGG 0.358765 7.1:-27176144 None:intergenic
GGTGCACAAATGGAACAAAT+TGG 0.362490 7.1:+27174520 MS.gene50959:CDS
CACAAAAGTTGTTTGTCATT+CGG 0.369193 7.1:-27174478 None:intergenic
TGAACTTGCTTTGGCTGCAA+TGG 0.370269 7.1:+27170728 MS.gene50959:CDS
ATTATTAGTACTCCTTGTAT+TGG 0.382879 7.1:+27170846 MS.gene50959:CDS
GAAATTTCACTAATAATTGC+TGG 0.383011 7.1:-27170417 None:intergenic
GCCTCAGAAACAAAACCATT+TGG 0.385246 7.1:-27170876 None:intergenic
TGGTGATATGAAGAGATTAA+TGG 0.385985 7.1:+27169633 MS.gene50959:CDS
GTCTATAGAGCTGGTGAACT+TGG 0.390142 7.1:-27174158 None:intergenic
GTGCATCGACGGTGCACAAA+TGG 0.392526 7.1:+27174510 MS.gene50959:CDS
TTTGTTCCTCTTGTAATTGA+AGG 0.396389 7.1:-27170645 None:intergenic
TATGCCAAATGGTTACTCTA+AGG 0.401101 7.1:+27171862 MS.gene50959:CDS
AGCAGCATGCAGAAGGGGTA+TGG 0.402136 7.1:+27171738 MS.gene50959:CDS
GAAGGCTATTCACAAGTATC+TGG 0.404248 7.1:-27176302 None:intergenic
TTGATTATATCAGACTCAAT+TGG 0.408893 7.1:+27170287 MS.gene50959:intron
GTTGCCATGGTCATGTCCTT+TGG 0.409163 7.1:-27174756 None:intergenic
AATTACAAGAGGAACAAATA+TGG 0.409950 7.1:+27170650 MS.gene50959:CDS
CCAAACTCGAGTTTAGAAAC+TGG 0.419938 7.1:+27170546 MS.gene50959:CDS
GGAATAAATGGAACCAGAAA+TGG 0.422357 7.1:+27171490 MS.gene50959:CDS
ATTACCTTAGAGTAACCATT+TGG 0.422663 7.1:-27171866 None:intergenic
CTCCCGTCGCTATGTCCATC+TGG 0.423743 7.1:-27176219 None:intergenic
TGGACGGCCTAGAAACTTGC+CGG 0.428194 7.1:-27170511 None:intergenic
GAACATGAAAGCTGCAGATC+TGG 0.433822 7.1:+27169709 MS.gene50959:CDS
AAGGAAGAGTGTGGATGATC+CGG 0.443006 7.1:+27174580 MS.gene50959:CDS
TGTATTGGTTTAAAACCAAA+TGG 0.443568 7.1:+27170861 MS.gene50959:CDS
CTCTTGCATTGGACCACCAT+TGG 0.446395 7.1:-27174720 None:intergenic
TGACCTAAAGGCATTGTTGA+AGG 0.455945 7.1:-27170594 None:intergenic
CAGAAATGGTGCTCTACAAC+TGG 0.456843 7.1:+27171504 MS.gene50959:CDS
GAAACAAGCACAGACGCATC+GGG 0.460821 7.1:+27176090 MS.gene50959:CDS
AGAAAACTCACCTCACGAAC+AGG 0.469601 7.1:-27171704 None:intergenic
GAATGTGGGCGAGGACGTTA+GGG 0.470341 7.1:+27174550 MS.gene50959:CDS
GACATTCACATTGGTGTTGG+AGG 0.471145 7.1:-27174230 None:intergenic
TTATGTTGCGCTTCTTCCGT+CGG 0.480355 7.1:+27176182 MS.gene50959:CDS
AAAGACTTGAACTTAGCAAA+AGG 0.481146 7.1:+27169971 MS.gene50959:CDS
TTAGTGCAGCAACCTCAGTT+TGG 0.483693 7.1:+27174624 MS.gene50959:CDS
ACGAGAAGCTTAGAAGTGAA+TGG 0.489778 7.1:+27174687 MS.gene50959:CDS
TATGTTGCGCTTCTTCCGTC+GGG 0.492269 7.1:+27176183 MS.gene50959:CDS
CAAATTGGATGCAGGGAATG+TGG 0.492429 7.1:+27174535 MS.gene50959:CDS
GATGATCCGGGTGAGCCACC+AGG 0.494229 7.1:+27174593 MS.gene50959:CDS
ACAATCCCTGGTGGCTCACC+CGG 0.495851 7.1:-27174599 None:intergenic
TGGATTAGAAGTGTTGAAAG+TGG 0.496742 7.1:+27170789 MS.gene50959:CDS
AAATGGAACAAATTGGATGC+AGG 0.503062 7.1:+27174527 MS.gene50959:CDS
CTAGACATTCACATTGGTGT+TGG 0.503771 7.1:-27174233 None:intergenic
ATACCTGAGTGTTCTCTAGC+GGG 0.506667 7.1:-27174279 None:intergenic
CACGGTGGAATCAGTGGAAA+CGG 0.508426 7.1:+27176338 MS.gene50959:CDS
ATGCCAAAATCTTGACCTAA+AGG 0.510136 7.1:-27170606 None:intergenic
CCTCCTACAGTTAAGAAAAG+TGG 0.511269 7.1:-27171813 None:intergenic
TGCAGAAGGGGTATGGGCAG+TGG 0.512805 7.1:+27171745 MS.gene50959:CDS
ACTTCAAGTACTTTCTCCAT+TGG 0.513136 7.1:+27171679 MS.gene50959:CDS
CGAGAAGCTTAGAAGTGAAT+GGG 0.514863 7.1:+27174688 MS.gene50959:CDS
GGTGGAGCATGCAGAATATG+AGG 0.519622 7.1:+27174131 MS.gene50959:CDS
CCTCCACAATTTGAACACAT+TGG 0.521367 7.1:-27170393 None:intergenic
AATCCAATGTGTTCAAATTG+TGG 0.530145 7.1:+27170390 MS.gene50959:CDS
ACTAGATATCACTTCAGTTG+TGG 0.533585 7.1:-27171467 None:intergenic
GAGGCTTCCTTCTGGTTGTG+TGG 0.534040 7.1:+27171832 MS.gene50959:CDS
TTCTAAGCTTCTCGTTGCGA+AGG 0.534552 7.1:-27174679 None:intergenic
ACCCTTGCTAAGCTTAGGCA+TGG 0.536023 7.1:+27174179 MS.gene50959:CDS
CACCGTCGATGCACAAACTC+CGG 0.536497 7.1:-27174501 None:intergenic
CCGTGAGCTTTGCCGTCGGA+AGG 0.537799 7.1:-27176320 None:intergenic
CTCCTACAGTTAAGAAAAGT+GGG 0.539174 7.1:-27171812 None:intergenic
AGGAAGAGTGTGGATGATCC+GGG 0.542002 7.1:+27174581 MS.gene50959:CDS
TCTGAGGCTTCTAGAGAAAG+TGG 0.543217 7.1:+27170891 MS.gene50959:CDS
TCAAGTTCTTGAATTTGTTG+AGG 0.544285 7.1:-27169817 None:intergenic
AAATAGAAGAACACAAATGA+AGG 0.546022 7.1:+27170032 MS.gene50959:CDS
GCAGCATGCAGAAGGGGTAT+GGG 0.548640 7.1:+27171739 MS.gene50959:CDS
CAGATCTGGTAGTGATAACA+TGG 0.549386 7.1:+27169723 MS.gene50959:CDS
TGCCGGAGTTTGTGCATCGA+CGG 0.549484 7.1:+27174499 MS.gene50959:CDS
CCCTTGCTAAGCTTAGGCAT+GGG 0.551648 7.1:+27174180 MS.gene50959:CDS
TCCATTGGTTCCTGTTCGTG+AGG 0.554096 7.1:+27171694 MS.gene50959:CDS
GGTAATGACAAGGAAGAGTG+TGG 0.554273 7.1:+27174571 MS.gene50959:CDS
TAGCAATAAATGCGGGAGGA+AGG 0.555245 7.1:+27174432 MS.gene50959:intron
ATGTGAGCCATCTCTTGCAT+TGG 0.555705 7.1:-27174731 None:intergenic
GCTGCACTAAGCACAATCCC+TGG 0.557792 7.1:-27174611 None:intergenic
TGCATACACTAGCTCGTAGG+AGG 0.558654 7.1:-27174787 None:intergenic
AGAAACAAGCACAGACGCAT+CGG 0.558699 7.1:+27176089 MS.gene50959:CDS
ACATTCACATTGGTGTTGGA+GGG 0.561373 7.1:-27174229 None:intergenic
TCAACACTTCTAATCCAAAG+AGG 0.561610 7.1:-27170783 None:intergenic
GGGTCGCAGCGGAGAGCGAG+TGG 0.562161 7.1:+27176258 MS.gene50959:CDS
AAATTGGATGCAGGGAATGT+GGG 0.562535 7.1:+27174536 MS.gene50959:CDS
AACATATGATGCAGGTGACA+TGG 0.564953 7.1:+27174109 MS.gene50959:intron
TTAGCAAGGGTCTATAGAGC+TGG 0.566123 7.1:-27174167 None:intergenic
TGTTGTTATCATAAACAGCT+TGG 0.566826 7.1:+27170914 MS.gene50959:CDS
ACCCATGCCTAAGCTTAGCA+AGG 0.568460 7.1:-27174181 None:intergenic
ACCTCACGAACAGGAACCAA+TGG 0.570995 7.1:-27171695 None:intergenic
ACCATCAGAGAAGCTTCAGC+TGG 0.571588 7.1:+27171785 MS.gene50959:CDS
GTAACAAATACTAATAGTAA+TGG 0.574242 7.1:+27170672 MS.gene50959:CDS
CTGTTGTATAACAGAATCGA+TGG 0.574417 7.1:+27171410 MS.gene50959:intron
GAGCTTCTTGCAATCACACA+AGG 0.574571 7.1:-27171445 None:intergenic
GTCGCTTGTTGTGTACGCGC+CGG 0.575675 7.1:+27176113 MS.gene50959:CDS
GGTTTCGCCGTGTTACCAGA+TGG 0.577544 7.1:+27176204 MS.gene50959:CDS
GGATGCAGGGAATGTGGGCG+AGG 0.578994 7.1:+27174541 MS.gene50959:CDS
AATGGAACAAATTGGATGCA+GGG 0.583192 7.1:+27174528 MS.gene50959:CDS
AATGGATGAGTTAGTGAAGA+TGG 0.583650 7.1:+27170746 MS.gene50959:CDS
TGCATTGCGGGAATATCTAC+CGG 0.586205 7.1:-27176132 None:intergenic
GGAGTGGTAATCACGATGAC+GGG 0.588681 7.1:+27176238 MS.gene50959:CDS
GAGTGATGATGACATTAAGA+TGG 0.589154 7.1:-27174256 None:intergenic
CCTTCCGACGGCAAAGCTCA+CGG 0.589815 7.1:+27176320 MS.gene50959:CDS
TACCAGATGGACATAGCGAC+GGG 0.591264 7.1:+27176217 MS.gene50959:CDS
AAACAAATAATGGTTTGAGA+AGG 0.592932 7.1:+27169671 MS.gene50959:CDS
ACAACTGAAGTGATATCTAG+TGG 0.593868 7.1:+27171469 MS.gene50959:CDS
TGGTGGTCCAATGCAAGAGA+TGG 0.598545 7.1:+27174724 MS.gene50959:CDS
TTGCAAGCAGCATGCAGAAG+GGG 0.600217 7.1:+27171733 MS.gene50959:CDS
ACCAGCTGAAGCTTCTCTGA+TGG 0.600752 7.1:-27171786 None:intergenic
GTGGTTCAAGATATGCCAAA+TGG 0.603358 7.1:+27171851 MS.gene50959:CDS
TTAATCATGAGGAATATACA+AGG 0.603991 7.1:+27170823 MS.gene50959:CDS
GATGGACATAGCGACGGGAG+TGG 0.607388 7.1:+27176222 MS.gene50959:CDS
GTTCCTCTTGTAATTGAAGG+TGG 0.608032 7.1:-27170642 None:intergenic
CTATGTGTAGCAATAAATGC+GGG 0.610261 7.1:+27174425 MS.gene50959:intron
TCACCACCTTCAATTACAAG+AGG 0.610841 7.1:+27170639 MS.gene50959:CDS
GGAGGGAGACACAGTTGCCA+TGG 0.612613 7.1:-27174769 None:intergenic
CCCATGCCTAAGCTTAGCAA+GGG 0.614032 7.1:-27174180 None:intergenic
GAATTTGTTGAGGAGTGTGT+CGG 0.614112 7.1:-27169807 None:intergenic
AAAGCTCACGGTGGAATCAG+TGG 0.620306 7.1:+27176332 MS.gene50959:CDS
TCCACCGTGAGCTTTGCCGT+CGG 0.623528 7.1:-27176324 None:intergenic
GTCACGAGAATTCACTACTT+AGG 0.625972 7.1:+27170313 MS.gene50959:CDS
TCTGGTAGTGATAACATGGA+TGG 0.630519 7.1:+27169727 MS.gene50959:CDS
GAATGGGACATACTCTCCAA+TGG 0.631124 7.1:+27174704 MS.gene50959:CDS
GGGAGTGGTAATCACGATGA+CGG 0.631663 7.1:+27176237 MS.gene50959:CDS
TGCCGGCAAGTGTACAAACT+CGG 0.632620 7.1:-27170494 None:intergenic
TTTGCAAGCAGCATGCAGAA+GGG 0.633056 7.1:+27171732 MS.gene50959:CDS
TCTTGAACCACACAACCAGA+AGG 0.644378 7.1:-27171839 None:intergenic
CCTATGTGTAGCAATAAATG+CGG 0.644689 7.1:+27174424 MS.gene50959:intron
AGATGGCTAGACATTCACAT+TGG 0.649420 7.1:-27174239 None:intergenic
GTTCATTACTACATGCATTG+CGG 0.652040 7.1:-27176145 None:intergenic
TTGGTAACGACGTAATTGGA+CGG 0.652910 7.1:-27170527 None:intergenic
ATATGCATACACTAGCTCGT+AGG 0.653193 7.1:-27174790 None:intergenic
TATAGACCCTTGCTAAGCTT+AGG 0.654709 7.1:+27174174 MS.gene50959:CDS
ACATATGATGCAGGTGACAT+GGG 0.655326 7.1:+27174110 MS.gene50959:intron
GCATACACTAGCTCGTAGGA+GGG 0.655354 7.1:-27174786 None:intergenic
GAGATGGCTCACATTGCCAA+AGG 0.656074 7.1:+27174740 MS.gene50959:CDS
ATCACGATGACGGGTCGCAG+CGG 0.657275 7.1:+27176247 MS.gene50959:CDS
GGTAACACGGCGAAACCCGA+CGG 0.657528 7.1:-27176198 None:intergenic
ATGATCCGGGTGAGCCACCA+GGG 0.658450 7.1:+27174594 MS.gene50959:CDS
GCAATGCATGTAGTAATGAA+CGG 0.659870 7.1:+27176147 MS.gene50959:CDS
TTACCAGATGGACATAGCGA+CGG 0.660884 7.1:+27176216 MS.gene50959:CDS
TATACCTGAGTGTTCTCTAG+CGG 0.665145 7.1:-27174280 None:intergenic
TGTCAATAAGAGAAGCAATG+AGG 0.665809 7.1:+27170367 MS.gene50959:CDS
CCAATGTGTTCAAATTGTGG+AGG 0.666399 7.1:+27170393 MS.gene50959:CDS
GCTATGTCCATCTGGTAACA+CGG 0.669438 7.1:-27176211 None:intergenic
ACTTGTGAATAGCCTTCCGA+CGG 0.670143 7.1:+27176308 MS.gene50959:CDS
TACCTGAGTGTTCTCTAGCG+GGG 0.673914 7.1:-27174278 None:intergenic
TGGGACATACTCTCCAATGG+TGG 0.679385 7.1:+27174707 MS.gene50959:CDS
TATGATGCAGGTGACATGGG+TGG 0.686232 7.1:+27174113 MS.gene50959:intron
CAAACAAATATAGAAGCACA+AGG 0.687269 7.1:+27169610 MS.gene50959:CDS
TGTGTAGCAATAAATGCGGG+AGG 0.696223 7.1:+27174428 MS.gene50959:intron
ATTGCCAAAGGACATGACCA+TGG 0.701545 7.1:+27174752 MS.gene50959:CDS
GCACTAAGCACAATCCCTGG+TGG 0.708167 7.1:-27174608 None:intergenic
AGCTTCTTGCAATCACACAA+GGG 0.721070 7.1:-27171444 None:intergenic
AAACAAGCACAGACGCATCG+GGG 0.726013 7.1:+27176091 MS.gene50959:CDS
AGGACGTTAGGGTAATGACA+AGG 0.727528 7.1:+27174561 MS.gene50959:CDS
TGAAGCGGGTAGCCAAACTG+AGG 0.731803 7.1:-27174636 None:intergenic
CTCCCCGCTAGAGAACACTC+AGG 0.744703 7.1:+27174276 MS.gene50959:CDS
TCCGACGGCAAAGCTCACGG+TGG 0.748267 7.1:+27176323 MS.gene50959:CDS
ACAAATATAGAAGCACAAGG+TGG 0.748500 7.1:+27169613 MS.gene50959:CDS
ATGCATGTAGTAATGAACGG+CGG 0.775511 7.1:+27176150 MS.gene50959:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTTAGAAACAAAAAA+TGG + chr7.1:27170174-27170193 MS.gene50959:intron 10.0%
!! CAACAAATTAATTATTTAAA+AGG - chr7.1:27173128-27173147 None:intergenic 10.0%
!! CATATATTACAAAAATTATT+AGG - chr7.1:27172258-27172277 None:intergenic 10.0%
!! GTTTATAAAAAATAATTGTT+TGG + chr7.1:27169890-27169909 MS.gene50959:intron 10.0%
!! TAATAAAAAACACTTAATTA+TGG - chr7.1:27174922-27174941 None:intergenic 10.0%
!!! AATTTTTGTAATATATGTAA+AGG + chr7.1:27172261-27172280 MS.gene50959:intron 10.0%
!!! AATTTTTTATATACATCTAT+TGG - chr7.1:27171950-27171969 None:intergenic 10.0%
!!! TTTATTTATTTATTTCAAGT+TGG + chr7.1:27172340-27172359 MS.gene50959:intron 10.0%
!!! TTTATTTTTTTCATTTTACT+TGG + chr7.1:27171046-27171065 MS.gene50959:intron 10.0%
!! AAAAAAATAAAATTAGAGAC+CGG - chr7.1:27170206-27170225 None:intergenic 15.0%
!! AATTTGAGCTATTTATTTAT+GGG + chr7.1:27175164-27175183 MS.gene50959:intron 15.0%
!! CCTTAAAAAATTAATAACAT+GGG - chr7.1:27172553-27172572 None:intergenic 15.0%
!! CTAAAACATTATAGTATTAA+TGG - chr7.1:27171572-27171591 None:intergenic 15.0%
!! GTTATATAATATATTCAATG+TGG + chr7.1:27173294-27173313 MS.gene50959:intron 15.0%
!! TCCTTAAAAAATTAATAACA+TGG - chr7.1:27172554-27172573 None:intergenic 15.0%
!! TTTGATCATATATAAACAAA+GGG - chr7.1:27175368-27175387 None:intergenic 15.0%
!!! AAAAGAAATTTTTAATCATG+AGG + chr7.1:27170812-27170831 MS.gene50959:CDS 15.0%
!!! TAATCAAGTGTTTTAAAAAA+TGG + chr7.1:27174945-27174964 MS.gene50959:intron 15.0%
!!! TTGCAAATATAATTTTTTAG+TGG + chr7.1:27171332-27171351 MS.gene50959:intron 15.0%
!!! TTTAAAGTGATGAAAATAAA+AGG - chr7.1:27171598-27171617 None:intergenic 15.0%
!!! TTTATTACTTTTTGGAATTT+GGG - chr7.1:27172208-27172227 None:intergenic 15.0%
!!! TTTTCTAAACATCAAAATTT+AGG - chr7.1:27175733-27175752 None:intergenic 15.0%
!!! TTTTGTCTTTTATATTTTGT+AGG + chr7.1:27169914-27169933 MS.gene50959:intron 15.0%
!! AAACAAAAAATGGTAAAAAC+CGG + chr7.1:27170184-27170203 MS.gene50959:intron 20.0%
!! AACTGAAATTTAGAAATGAA+TGG + chr7.1:27175431-27175450 MS.gene50959:intron 20.0%
!! AATTGAATCATATTTCACTA+TGG - chr7.1:27175148-27175167 None:intergenic 20.0%
!! AATTTCCATCAAACAAATAA+TGG + chr7.1:27169661-27169680 MS.gene50959:CDS 20.0%
!! ACTTAATTATGGTATTAGTT+TGG - chr7.1:27174911-27174930 None:intergenic 20.0%
!! AGAGATGAAAAATACAAAAT+TGG - chr7.1:27172106-27172125 None:intergenic 20.0%
!! CAAATATAACTACTAATTTC+AGG + chr7.1:27173785-27173804 MS.gene50959:intron 20.0%
!! CAAATTCCAAAAAGTAATAA+AGG + chr7.1:27172207-27172226 MS.gene50959:intron 20.0%
!! CAAGTACATACATAAAATAA+TGG - chr7.1:27173480-27173499 None:intergenic 20.0%
!! CAATTTGAGCTATTTATTTA+TGG + chr7.1:27175163-27175182 MS.gene50959:intron 20.0%
!! CATGAGATAATTGTAAATAT+TGG - chr7.1:27171162-27171181 None:intergenic 20.0%
!! GAAAAAGAAAACAAAAAATG+TGG + chr7.1:27175748-27175767 MS.gene50959:intron 20.0%
!! GTAACAAATACTAATAGTAA+TGG + chr7.1:27170672-27170691 MS.gene50959:CDS 20.0%
!! GTTTGATCATATATAAACAA+AGG - chr7.1:27175369-27175388 None:intergenic 20.0%
!! TAAGAAAATGATATTGAAGA+TGG - chr7.1:27174820-27174839 None:intergenic 20.0%
!! TAATAACTCGATTATTTAGA+AGG + chr7.1:27173814-27173833 MS.gene50959:intron 20.0%
!! TAATGGTATAACTAATAACA+TGG + chr7.1:27174074-27174093 MS.gene50959:intron 20.0%
!! TCAATGTAAATATACTACTT+TGG - chr7.1:27175229-27175248 None:intergenic 20.0%
!! TGAATCCATTAATTTAATCA+TGG + chr7.1:27173051-27173070 MS.gene50959:intron 20.0%
!! TGCCAAATTATAGTATATAT+GGG + chr7.1:27173711-27173730 MS.gene50959:intron 20.0%
!! TTAGACTATGAAATTTGTAA+CGG + chr7.1:27173860-27173879 MS.gene50959:intron 20.0%
!! TTGAGAGACTAATTATAAAA+GGG - chr7.1:27172941-27172960 None:intergenic 20.0%
!! TTGCCAAATTATAGTATATA+TGG + chr7.1:27173710-27173729 MS.gene50959:intron 20.0%
!! TTTGAGAGACTAATTATAAA+AGG - chr7.1:27172942-27172961 None:intergenic 20.0%
!!! AAAGATGAACTTTTTTATGA+AGG - chr7.1:27169862-27169881 None:intergenic 20.0%
!!! AAATTTAGGTTAAAAGAATG+AGG - chr7.1:27175719-27175738 None:intergenic 20.0%
!!! AACTTTTTTTTTCTTCTTCT+AGG - chr7.1:27170143-27170162 None:intergenic 20.0%
!!! ATTGAGCAATATTTTAAAGT+TGG + chr7.1:27172392-27172411 MS.gene50959:intron 20.0%
!!! CAAAAGTAGAAACTTAATTT+TGG + chr7.1:27172613-27172632 MS.gene50959:intron 20.0%
!!! CAAAATTAAGTTTCTACTTT+TGG - chr7.1:27172615-27172634 None:intergenic 20.0%
!!! CCCATGTTATTAATTTTTTA+AGG + chr7.1:27172550-27172569 MS.gene50959:intron 20.0%
!!! CTTATATCATGAAATTTTGT+TGG + chr7.1:27175863-27175882 MS.gene50959:intron 20.0%
!!! CTTTATTACTTTTTGGAATT+TGG - chr7.1:27172209-27172228 None:intergenic 20.0%
!!! GCATCATGTATTTTATAAAA+GGG - chr7.1:27171923-27171942 None:intergenic 20.0%
!!! TTGAGCAATATTTTAAAGTT+GGG + chr7.1:27172393-27172412 MS.gene50959:intron 20.0%
!!! TTTGATTTTTAGAGTTTTGT+TGG - chr7.1:27175990-27176009 None:intergenic 20.0%
! AAACAAATAATGGTTTGAGA+AGG + chr7.1:27169671-27169690 MS.gene50959:CDS 25.0%
! AAATAGAAGAACACAAATGA+AGG + chr7.1:27170032-27170051 MS.gene50959:CDS 25.0%
! AACATGACCCATTATAAAAT+GGG - chr7.1:27172755-27172774 None:intergenic 25.0%
! AAGACAATTTGTAACAGAAA+AGG + chr7.1:27175605-27175624 MS.gene50959:intron 25.0%
! AATAGCTAACAATTATGTTG+TGG + chr7.1:27173961-27173980 MS.gene50959:intron 25.0%
! AATTACAAGAGGAACAAATA+TGG + chr7.1:27170650-27170669 MS.gene50959:CDS 25.0%
! AGAAACATTGCATTGAAAAA+TGG - chr7.1:27175299-27175318 None:intergenic 25.0%
! AGACAATTTGTAACAGAAAA+GGG + chr7.1:27175606-27175625 MS.gene50959:intron 25.0%
! AGCCCATATATACTATAATT+TGG - chr7.1:27173716-27173735 None:intergenic 25.0%
! AGTCTATTATCTTGATTCAA+AGG - chr7.1:27173322-27173341 None:intergenic 25.0%
! ATTATTAGTACTCCTTGTAT+TGG + chr7.1:27170846-27170865 MS.gene50959:CDS 25.0%
! CTCAAAAGTTAGAAAAATGT+AGG - chr7.1:27175690-27175709 None:intergenic 25.0%
! GAAATTTCACTAATAATTGC+TGG - chr7.1:27170420-27170439 None:intergenic 25.0%
! GACTTCCATGATTAAATTAA+TGG - chr7.1:27173059-27173078 None:intergenic 25.0%
! GTCTATTATCTTGATTCAAA+GGG - chr7.1:27173321-27173340 None:intergenic 25.0%
! TAACATGACCCATTATAAAA+TGG - chr7.1:27172756-27172775 None:intergenic 25.0%
! TATAAAAGGGTAATGTTAAC+CGG - chr7.1:27172928-27172947 None:intergenic 25.0%
! TCAAACCATTATTTGTTTGA+TGG - chr7.1:27169669-27169688 None:intergenic 25.0%
! TGAACCCTATAAAAACATAT+AGG + chr7.1:27173268-27173287 MS.gene50959:intron 25.0%
! TGATTTCTTAATCAATGATC+CGG + chr7.1:27172897-27172916 MS.gene50959:intron 25.0%
! TTAATCATGAGGAATATACA+AGG + chr7.1:27170823-27170842 MS.gene50959:CDS 25.0%
! TTGAATGAAGTAGTTGAAAA+AGG - chr7.1:27170971-27170990 None:intergenic 25.0%
! TTGATTATATCAGACTCAAT+TGG + chr7.1:27170287-27170306 MS.gene50959:intron 25.0%
! TTGATTATGAACATGATTCA+TGG - chr7.1:27173596-27173615 None:intergenic 25.0%
!! AACATGACCCATTTTATAAT+GGG + chr7.1:27172745-27172764 MS.gene50959:intron 25.0%
!! CATAGTCTAAGCTTTAATAA+TGG - chr7.1:27173850-27173869 None:intergenic 25.0%
!! CGCATCATGTATTTTATAAA+AGG - chr7.1:27171924-27171943 None:intergenic 25.0%
!! CTTTTAAACTTGTGTCTTAA+GGG - chr7.1:27172592-27172611 None:intergenic 25.0%
!! GGAATAGTATCTTTTTCTTT+TGG + chr7.1:27170095-27170114 MS.gene50959:intron 25.0%
!! TAACATGACCCATTTTATAA+TGG + chr7.1:27172744-27172763 MS.gene50959:intron 25.0%
!! TATTTCACTATGGTAATGTT+CGG - chr7.1:27175138-27175157 None:intergenic 25.0%
!! TCATTTGTGTTCTTCTATTT+TGG - chr7.1:27170032-27170051 None:intergenic 25.0%
!! TGGAGTTCAATATTTTCATA+CGG + chr7.1:27170115-27170134 MS.gene50959:intron 25.0%
!!! ACTGACCTATATGTTTTTAT+AGG - chr7.1:27173276-27173295 None:intergenic 25.0%
!!! ACTTTTGGAAAGTGTTTTTT+TGG - chr7.1:27170061-27170080 None:intergenic 25.0%
!!! AGTTTCAGATTTTGACTTTT+TGG - chr7.1:27175656-27175675 None:intergenic 25.0%
!!! CTGACCTATATGTTTTTATA+GGG - chr7.1:27173275-27173294 None:intergenic 25.0%
!!! GTCTTTTTCGTTAAGTTTTA+GGG - chr7.1:27175806-27175825 None:intergenic 25.0%
!!! GTGAATCCTTTATTACTTTT+TGG - chr7.1:27172216-27172235 None:intergenic 25.0%
!!! GTTTAATTTGAACTATGTCA+TGG + chr7.1:27171181-27171200 MS.gene50959:intron 25.0%
!!! TAACATTGGTTTACATGTTA+GGG + chr7.1:27172064-27172083 MS.gene50959:intron 25.0%
!!! TAATGGTTTTGATAGATCAA+TGG + chr7.1:27170689-27170708 MS.gene50959:CDS 25.0%
!!! TCTTTTTGCTATAAGTGTTT+GGG + chr7.1:27173352-27173371 MS.gene50959:intron 25.0%
!!! TGAGCAATATTTTAAAGTTG+GGG + chr7.1:27172394-27172413 MS.gene50959:intron 25.0%
!!! TGTATTGGTTTAAAACCAAA+TGG + chr7.1:27170861-27170880 MS.gene50959:CDS 25.0%
!!! TGTCTTTTTCGTTAAGTTTT+AGG - chr7.1:27175807-27175826 None:intergenic 25.0%
!!! TTTGGTTTTAAACCAATACA+AGG - chr7.1:27170861-27170880 None:intergenic 25.0%
AAACAAAAAATGTGGTACCA+AGG + chr7.1:27175756-27175775 MS.gene50959:intron 30.0%
AAACAGTTGAGATAGTAGTA+CGG - chr7.1:27172303-27172322 None:intergenic 30.0%
AAAGACTTGAACTTAGCAAA+AGG + chr7.1:27169971-27169990 MS.gene50959:CDS 30.0%
AAATGCTAAATAGTGTCCTT+GGG - chr7.1:27175345-27175364 None:intergenic 30.0%
AAGTTGGGATTTCATGAATA+TGG + chr7.1:27174034-27174053 MS.gene50959:intron 30.0%
AATCCAATGTGTTCAAATTG+TGG + chr7.1:27170390-27170409 MS.gene50959:CDS 30.0%
ACAATAAACTTCGCAAAGTT+GGG + chr7.1:27174019-27174038 MS.gene50959:intron 30.0%
AGCTACCAAAATTTAAGTGA+TGG - chr7.1:27173083-27173102 None:intergenic 30.0%
ATGAAAAGGTGAAATTGAGA+AGG + chr7.1:27175551-27175570 MS.gene50959:intron 30.0%
ATTACCTTAGAGTAACCATT+TGG - chr7.1:27171869-27171888 None:intergenic 30.0%
CAAAAGTCTTTGTATTCACA+TGG + chr7.1:27170074-27170093 MS.gene50959:intron 30.0%
CAAGTATGAACAGAAAATCT+TGG - chr7.1:27173562-27173581 None:intergenic 30.0%
CACAAAAGTTGTTTGTCATT+CGG - chr7.1:27174481-27174500 None:intergenic 30.0%
CATTGAAAAATGGTGAAAAG+TGG - chr7.1:27175289-27175308 None:intergenic 30.0%
GATTTCTTAATCAATGATCC+GGG + chr7.1:27172898-27172917 MS.gene50959:intron 30.0%
GCTACGTGCAATATAAAATT+AGG - chr7.1:27173419-27173438 None:intergenic 30.0%
GTGATATCTAGTGGAATAAA+TGG + chr7.1:27171478-27171497 MS.gene50959:CDS 30.0%
GTGTACAAGTAATTGAAACA+TGG + chr7.1:27172362-27172381 MS.gene50959:intron 30.0%
TAATTTGAACTATGTCATGG+AGG + chr7.1:27171184-27171203 MS.gene50959:intron 30.0%
TACAATAAACTTCGCAAAGT+TGG + chr7.1:27174018-27174037 MS.gene50959:intron 30.0%
TACTAGATAAAGTCATCATC+CGG - chr7.1:27173454-27173473 None:intergenic 30.0%
TGGTGATATGAAGAGATTAA+TGG + chr7.1:27169633-27169652 MS.gene50959:CDS 30.0%
TGGTTAAGGAAACTAAGAAA+AGG + chr7.1:27172795-27172814 MS.gene50959:intron 30.0%
TGTTGTTATCATAAACAGCT+TGG + chr7.1:27170914-27170933 MS.gene50959:CDS 30.0%
TTGTTAAATGTGTGTGTGTA+TGG - chr7.1:27174368-27174387 None:intergenic 30.0%
TTTACATGAACATATGATGC+AGG + chr7.1:27174101-27174120 MS.gene50959:intron 30.0%
TTTGTTCCTCTTGTAATTGA+AGG - chr7.1:27170648-27170667 None:intergenic 30.0%
! AAACAAGACAAGTCAAGTTT+TGG + chr7.1:27170004-27170023 MS.gene50959:CDS 30.0%
! AGGAAATCAAAGACTTTTTG+TGG - chr7.1:27174662-27174681 None:intergenic 30.0%
! AGTCTCCATCACTTAAATTT+TGG + chr7.1:27173075-27173094 MS.gene50959:intron 30.0%
! CAAACAAATATAGAAGCACA+AGG + chr7.1:27169610-27169629 MS.gene50959:CDS 30.0%
! CATGTGAATACAAAGACTTT+TGG - chr7.1:27170076-27170095 None:intergenic 30.0%
! GCAAAATTAGCTTCTAACAT+TGG + chr7.1:27172050-27172069 MS.gene50959:intron 30.0%
! GCTTTTAAACTTGTGTCTTA+AGG - chr7.1:27172593-27172612 None:intergenic 30.0%
! TATGTTTCTTGAACTTGCTT+TGG + chr7.1:27170719-27170738 MS.gene50959:CDS 30.0%
! TTTTTATAGGGTTCAAAACC+AGG - chr7.1:27173263-27173282 None:intergenic 30.0%
!! CTAACATTGGTTTACATGTT+AGG + chr7.1:27172063-27172082 MS.gene50959:intron 30.0%
!! GTCTTTTTGCTATAAGTGTT+TGG + chr7.1:27173351-27173370 MS.gene50959:intron 30.0%
!! TATGAAATTTGTAACGGACT+TGG + chr7.1:27173866-27173885 MS.gene50959:intron 30.0%
!! TCAAGTTCTTGAATTTGTTG+AGG - chr7.1:27169820-27169839 None:intergenic 30.0%
!! TTATAATGGGTCATGTTAAC+CGG + chr7.1:27172758-27172777 MS.gene50959:intron 30.0%
!!! AATATTTTAAAGTTGGGGAG+GGG + chr7.1:27172399-27172418 MS.gene50959:intron 30.0%
!!! AGTTTAGAAACTGGTTTTGT+TGG + chr7.1:27170555-27170574 MS.gene50959:CDS 30.0%
!!! ATTTGCTATATTTTGCAGTG+TGG - chr7.1:27173387-27173406 None:intergenic 30.0%
!!! CAAGTCTTTGTTTTTCATCA+GGG - chr7.1:27169960-27169979 None:intergenic 30.0%
!!! CAATATTTTAAAGTTGGGGA+GGG + chr7.1:27172398-27172417 MS.gene50959:intron 30.0%
!!! TCAAGTCTTTGTTTTTCATC+AGG - chr7.1:27169961-27169980 None:intergenic 30.0%
!!! TGATAACGTTTTTTTCTTGG+TGG - chr7.1:27169787-27169806 None:intergenic 30.0%
!!! TTACTTTTTGGAATTTGGGA+AGG - chr7.1:27172204-27172223 None:intergenic 30.0%
!!! TTTTCGTTAAGTTTTAGGGT+TGG - chr7.1:27175802-27175821 None:intergenic 30.0%
!!! TTTTTTTCTTGGTGGATTGT+CGG - chr7.1:27169779-27169798 None:intergenic 30.0%
AAATGGAACAAATTGGATGC+AGG + chr7.1:27174527-27174546 MS.gene50959:CDS 35.0%
AACACAAAGCTAAGGAATCA+TGG + chr7.1:27172425-27172444 MS.gene50959:intron 35.0%
AATGCTAAATAGTGTCCTTG+GGG - chr7.1:27175344-27175363 None:intergenic 35.0%
AATGGAACAAATTGGATGCA+GGG + chr7.1:27174528-27174547 MS.gene50959:CDS 35.0%
AATGGATGAGTTAGTGAAGA+TGG + chr7.1:27170746-27170765 MS.gene50959:CDS 35.0%
ACAACTGAAGTGATATCTAG+TGG + chr7.1:27171469-27171488 MS.gene50959:CDS 35.0%
ACTAGATAAAGTCATCATCC+GGG - chr7.1:27173453-27173472 None:intergenic 35.0%
ACTAGATATCACTTCAGTTG+TGG - chr7.1:27171470-27171489 None:intergenic 35.0%
ACTTCAAGTACTTTCTCCAT+TGG + chr7.1:27171679-27171698 MS.gene50959:CDS 35.0%
AGGACAGGGTTGAAAATATT+TGG + chr7.1:27175571-27175590 MS.gene50959:intron 35.0%
AGTGATGAACACATCAATGT+AGG + chr7.1:27173017-27173036 MS.gene50959:intron 35.0%
ATATGGTAGGAAAATGAGCA+TGG + chr7.1:27174051-27174070 MS.gene50959:intron 35.0%
ATCATTCACACATGTTGAAC+AGG - chr7.1:27173637-27173656 None:intergenic 35.0%
ATGAGCTTTCTAAGTTGCTT+GGG - chr7.1:27172463-27172482 None:intergenic 35.0%
ATGCCAAAATCTTGACCTAA+AGG - chr7.1:27170609-27170628 None:intergenic 35.0%
ATTCATGAAATTGTGTGACC+TGG + chr7.1:27173242-27173261 MS.gene50959:intron 35.0%
CATCAATGTAGGTGAAATCT+AGG + chr7.1:27173028-27173047 MS.gene50959:intron 35.0%
CCTATGTGTAGCAATAAATG+CGG + chr7.1:27174424-27174443 MS.gene50959:intron 35.0%
CGATGTGTTTCACAAGATTA+CGG - chr7.1:27173759-27173778 None:intergenic 35.0%
CTAAGCCAAGAATGATTGAA+AGG - chr7.1:27171017-27171036 None:intergenic 35.0%
CTATGTGTAGCAATAAATGC+GGG + chr7.1:27174425-27174444 MS.gene50959:intron 35.0%
CTCCTACAGTTAAGAAAAGT+GGG - chr7.1:27171815-27171834 None:intergenic 35.0%
CTGTTCATACTTGTACATCA+TGG + chr7.1:27173569-27173588 MS.gene50959:intron 35.0%
CTGTTGTATAACAGAATCGA+TGG + chr7.1:27171410-27171429 MS.gene50959:intron 35.0%
CTTTCAATCATTCTTGGCTT+AGG + chr7.1:27171015-27171034 MS.gene50959:intron 35.0%
GAAATGCTAAATAGTGTCCT+TGG - chr7.1:27175346-27175365 None:intergenic 35.0%
GATAACATGGATGGTATTTC+TGG + chr7.1:27169736-27169755 MS.gene50959:CDS 35.0%
GATTATTTAGAAGGATGCGT+CGG + chr7.1:27173823-27173842 MS.gene50959:intron 35.0%
GCAATGCATGTAGTAATGAA+CGG + chr7.1:27176147-27176166 MS.gene50959:CDS 35.0%
GGAATAAATGGAACCAGAAA+TGG + chr7.1:27171490-27171509 MS.gene50959:CDS 35.0%
GGCTCTTGTTGAAACTTTAA+TGG + chr7.1:27170935-27170954 MS.gene50959:CDS 35.0%
GGTAATGTTCGGCAATAATA+TGG - chr7.1:27175127-27175146 None:intergenic 35.0%
GTAGTCAATAAGTCAAACCT+TGG - chr7.1:27175776-27175795 None:intergenic 35.0%
GTTCATTACTACATGCATTG+CGG - chr7.1:27176148-27176167 None:intergenic 35.0%
TAGGAAAATGAGCATGGTAA+TGG + chr7.1:27174057-27174076 MS.gene50959:intron 35.0%
TATGCCAAATGGTTACTCTA+AGG + chr7.1:27171862-27171881 MS.gene50959:CDS 35.0%
TATTTGTCCACAATAACCCA+CGG + chr7.1:27174392-27174411 MS.gene50959:intron 35.0%
TCAACACTTCTAATCCAAAG+AGG - chr7.1:27170786-27170805 None:intergenic 35.0%
TCTCCATAAGATAGATACCT+TGG + chr7.1:27173505-27173524 MS.gene50959:intron 35.0%
TGGGATTTCATGAATATGGT+AGG + chr7.1:27174038-27174057 MS.gene50959:intron 35.0%
TGTCAATAAGAGAAGCAATG+AGG + chr7.1:27170367-27170386 MS.gene50959:CDS 35.0%
TTCATTACTACATGCATTGC+GGG - chr7.1:27176147-27176166 None:intergenic 35.0%
! AAAGACTTTTTGTGGTGAAG+CGG - chr7.1:27174654-27174673 None:intergenic 35.0%
! ACAAATATAGAAGCACAAGG+TGG + chr7.1:27169613-27169632 MS.gene50959:CDS 35.0%
! AGACCAAGGTATCTATCTTA+TGG - chr7.1:27173511-27173530 None:intergenic 35.0%
! ATGACAAACAACTTTTGTGC+CGG + chr7.1:27174482-27174501 MS.gene50959:CDS 35.0%
! ATGCCTTTAGGTCAAGATTT+TGG + chr7.1:27170603-27170622 MS.gene50959:CDS 35.0%
! CTTAGCCTTTCAATCATTCT+TGG + chr7.1:27171009-27171028 MS.gene50959:intron 35.0%
! GAGTGATGATGACATTAAGA+TGG - chr7.1:27174259-27174278 None:intergenic 35.0%
! TTTTGTGATAGACACAAGAG+AGG - chr7.1:27172989-27173008 None:intergenic 35.0%
!! ACTTAGCAAAAGGCTTTGTT+TGG + chr7.1:27169981-27170000 MS.gene50959:CDS 35.0%
!! GTTTTGATAGATCAATGGAG+AGG + chr7.1:27170694-27170713 MS.gene50959:CDS 35.0%
!! TGGATTAGAAGTGTTGAAAG+TGG + chr7.1:27170789-27170808 MS.gene50959:CDS 35.0%
!! TTTAGGTCAAGATTTTGGCA+TGG + chr7.1:27170608-27170627 MS.gene50959:CDS 35.0%
!!! ACCAAATGGTTTTGTTTCTG+AGG + chr7.1:27170875-27170894 MS.gene50959:CDS 35.0%
!!! ATATTTTAAAGTTGGGGAGG+GGG + chr7.1:27172400-27172419 MS.gene50959:intron 35.0%
!!! CGGTGATAACGTTTTTTTCT+TGG - chr7.1:27169790-27169809 None:intergenic 35.0%
!!! CGTTGTTTTTTTCTCTTTGC+AGG + chr7.1:27176029-27176048 MS.gene50959:intron 35.0%
!!! GCAATATTTTAAAGTTGGGG+AGG + chr7.1:27172397-27172416 MS.gene50959:intron 35.0%
AAATAGTGTCCTTGGGGTAT+TGG - chr7.1:27175338-27175357 None:intergenic 40.0%
AAATTGGATGCAGGGAATGT+GGG + chr7.1:27174536-27174555 MS.gene50959:CDS 40.0%
AACATATGATGCAGGTGACA+TGG + chr7.1:27174109-27174128 MS.gene50959:intron 40.0%
AACTAGTGTCTTCAGGACAA+TGG + chr7.1:27175194-27175213 MS.gene50959:intron 40.0%
AAGGTGAAATTGAGAAGGAC+AGG + chr7.1:27175556-27175575 MS.gene50959:intron 40.0%
ACATAGGAACATAACACCGT+GGG - chr7.1:27174411-27174430 None:intergenic 40.0%
ACATATGATGCAGGTGACAT+GGG + chr7.1:27174110-27174129 MS.gene50959:intron 40.0%
ACGAGAAGCTTAGAAGTGAA+TGG + chr7.1:27174687-27174706 MS.gene50959:CDS 40.0%
AGAAAATCTTGGAGAAAGCC+TGG - chr7.1:27173551-27173570 None:intergenic 40.0%
AGATGGCTAGACATTCACAT+TGG - chr7.1:27174242-27174261 None:intergenic 40.0%
AGCTTCTCTGATGGTATCTA+TGG - chr7.1:27171780-27171799 None:intergenic 40.0%
AGCTTCTTGCAATCACACAA+GGG - chr7.1:27171447-27171466 None:intergenic 40.0%
AGGTGAAATTGAGAAGGACA+GGG + chr7.1:27175557-27175576 MS.gene50959:intron 40.0%
AGTCTCTCAAATATGCAACC+TGG + chr7.1:27172951-27172970 MS.gene50959:intron 40.0%
ATATGCATACACTAGCTCGT+AGG - chr7.1:27174793-27174812 None:intergenic 40.0%
ATGCATGTAGTAATGAACGG+CGG + chr7.1:27176150-27176169 MS.gene50959:CDS 40.0%
CAAGCAACTTAGAAAGCTCA+TGG + chr7.1:27172462-27172481 MS.gene50959:intron 40.0%
CACAAACTAATGAGCCTCTT+TGG + chr7.1:27170769-27170788 MS.gene50959:CDS 40.0%
CACATGTTGAACAGGAATGA+AGG - chr7.1:27173629-27173648 None:intergenic 40.0%
CATGAGCTTTCTAAGTTGCT+TGG - chr7.1:27172464-27172483 None:intergenic 40.0%
CCAAACTCGAGTTTAGAAAC+TGG + chr7.1:27170546-27170565 MS.gene50959:CDS 40.0%
CCAATGTGTTCAAATTGTGG+AGG + chr7.1:27170393-27170412 MS.gene50959:CDS 40.0%
CCAGTTTCTAAACTCGAGTT+TGG - chr7.1:27170549-27170568 None:intergenic 40.0%
CCGCATTTATTGCTACACAT+AGG - chr7.1:27174427-27174446 None:intergenic 40.0%
CCTCCACAATTTGAACACAT+TGG - chr7.1:27170396-27170415 None:intergenic 40.0%
CCTCCTACAGTTAAGAAAAG+TGG - chr7.1:27171816-27171835 None:intergenic 40.0%
CGAGAAGCTTAGAAGTGAAT+GGG + chr7.1:27174688-27174707 MS.gene50959:CDS 40.0%
CTAGACATTCACATTGGTGT+TGG - chr7.1:27174236-27174255 None:intergenic 40.0%
GAAAGGCTAAGAAGAGAAGT+TGG - chr7.1:27171000-27171019 None:intergenic 40.0%
GAAGGCTATTCACAAGTATC+TGG - chr7.1:27176305-27176324 None:intergenic 40.0%
GCCTCAGAAACAAAACCATT+TGG - chr7.1:27170879-27170898 None:intergenic 40.0%
GGAGTAGTCATTAGTGTTAC+AGG - chr7.1:27171141-27171160 None:intergenic 40.0%
GGTGCACAAATGGAACAAAT+TGG + chr7.1:27174520-27174539 MS.gene50959:CDS 40.0%
GTCACGAGAATTCACTACTT+AGG + chr7.1:27170313-27170332 MS.gene50959:CDS 40.0%
GTCTCTCAAATATGCAACCT+GGG + chr7.1:27172952-27172971 MS.gene50959:intron 40.0%
GTGGTTCAAGATATGCCAAA+TGG + chr7.1:27171851-27171870 MS.gene50959:CDS 40.0%
GTTCCTCTTGTAATTGAAGG+TGG - chr7.1:27170645-27170664 None:intergenic 40.0%
TAGTTTCCTTAACCAGTGTC+CGG - chr7.1:27172790-27172809 None:intergenic 40.0%
TATACCTGAGTGTTCTCTAG+CGG - chr7.1:27174283-27174302 None:intergenic 40.0%
TATAGACCCTTGCTAAGCTT+AGG + chr7.1:27174174-27174193 MS.gene50959:CDS 40.0%
TCACCACCTTCAATTACAAG+AGG + chr7.1:27170639-27170658 MS.gene50959:CDS 40.0%
TCATCTTAACCAATACCCCA+AGG + chr7.1:27175326-27175345 MS.gene50959:intron 40.0%
TCTATTCCAATCTCTCATGC+AGG + chr7.1:27173193-27173212 MS.gene50959:intron 40.0%
TCTTGCTAACTAGTGTCTTC+AGG + chr7.1:27175187-27175206 MS.gene50959:intron 40.0%
TGTCTTCAGGACAATGGTTA+AGG + chr7.1:27175200-27175219 MS.gene50959:intron 40.0%
TTCACAAGATTACGGTGACA+TGG - chr7.1:27173751-27173770 None:intergenic 40.0%
TTGCCTTCAACAATGCCTTT+AGG + chr7.1:27170591-27170610 MS.gene50959:CDS 40.0%
! AAGACTTTTTGTGGTGAAGC+GGG - chr7.1:27174653-27174672 None:intergenic 40.0%
! CAGATCTGGTAGTGATAACA+TGG + chr7.1:27169723-27169742 MS.gene50959:CDS 40.0%
! TCTGGTAGTGATAACATGGA+TGG + chr7.1:27169727-27169746 MS.gene50959:CDS 40.0%
! TGTAAGTTGAGGATCCACAT+TGG - chr7.1:27174326-27174345 None:intergenic 40.0%
! TTCGTGAGGTGAGTTTTCTA+AGG + chr7.1:27171708-27171727 MS.gene50959:CDS 40.0%
!! ACATTCACATTGGTGTTGGA+GGG - chr7.1:27174232-27174251 None:intergenic 40.0%
!! ACGTAGCTTCTCTAAAATCC+CGG + chr7.1:27173432-27173451 MS.gene50959:intron 40.0%
!! ATCCTTAACTTGTGCCCTTA+GGG + chr7.1:27172714-27172733 MS.gene50959:intron 40.0%
!! CACCCACTTTTCTTAACTGT+AGG + chr7.1:27171810-27171829 MS.gene50959:CDS 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG - chr7.1:27172731-27172750 None:intergenic 40.0%
!! CCACTTTTCTTAACTGTAGG+AGG + chr7.1:27171813-27171832 MS.gene50959:CDS 40.0%
!! GAATTTGTTGAGGAGTGTGT+CGG - chr7.1:27169810-27169829 None:intergenic 40.0%
!! GAGTTTGGTAACGACGTAAT+TGG - chr7.1:27170534-27170553 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG - chr7.1:27172732-27172751 None:intergenic 40.0%
!! TGACCTAAAGGCATTGTTGA+AGG - chr7.1:27170597-27170616 None:intergenic 40.0%
!! TTGGTAACGACGTAATTGGA+CGG - chr7.1:27170530-27170549 None:intergenic 40.0%
!! TTGTTTTGTCGCGTAGTCAT+TGG + chr7.1:27175528-27175547 MS.gene50959:intron 40.0%
!!! CTTTGTTTTTCATCAGGGTG+AGG - chr7.1:27169955-27169974 None:intergenic 40.0%
ACTTGTGAATAGCCTTCCGA+CGG + chr7.1:27176308-27176327 MS.gene50959:CDS 45.0%
AGAAAACTCACCTCACGAAC+AGG - chr7.1:27171707-27171726 None:intergenic 45.0%
AGAAACAAGCACAGACGCAT+CGG + chr7.1:27176089-27176108 MS.gene50959:CDS 45.0%
AGGACGTTAGGGTAATGACA+AGG + chr7.1:27174561-27174580 MS.gene50959:CDS 45.0%
AGGGGGAAAACACAAAGCTA+AGG + chr7.1:27172417-27172436 MS.gene50959:intron 45.0%
ATACCTGAGTGTTCTCTAGC+GGG - chr7.1:27174282-27174301 None:intergenic 45.0%
ATGTGAGCCATCTCTTGCAT+TGG - chr7.1:27174734-27174753 None:intergenic 45.0%
ATTGCCAAAGGACATGACCA+TGG + chr7.1:27174752-27174771 MS.gene50959:CDS 45.0%
CAAATTGGATGCAGGGAATG+TGG + chr7.1:27174535-27174554 MS.gene50959:CDS 45.0%
CACATAGGAACATAACACCG+TGG - chr7.1:27174412-27174431 None:intergenic 45.0%
CAGAAATGGTGCTCTACAAC+TGG + chr7.1:27171504-27171523 MS.gene50959:CDS 45.0%
CGCGTAGTCATTGGATGAAA+AGG + chr7.1:27175537-27175556 MS.gene50959:intron 45.0%
GAACAACCTGCATGAGAGAT+TGG - chr7.1:27173202-27173221 None:intergenic 45.0%
GAACATGAAAGCTGCAGATC+TGG + chr7.1:27169709-27169728 MS.gene50959:CDS 45.0%
GAATGGGACATACTCTCCAA+TGG + chr7.1:27174704-27174723 MS.gene50959:CDS 45.0%
GAGCTTCTTGCAATCACACA+AGG - chr7.1:27171448-27171467 None:intergenic 45.0%
GCTATGTCCATCTGGTAACA+CGG - chr7.1:27176214-27176233 None:intergenic 45.0%
GGCAAAATCACGAGTATTCG+CGG - chr7.1:27173695-27173714 None:intergenic 45.0%
GGTAATGACAAGGAAGAGTG+TGG + chr7.1:27174571-27174590 MS.gene50959:CDS 45.0%
GTCTATAGAGCTGGTGAACT+TGG - chr7.1:27174161-27174180 None:intergenic 45.0%
TAGAACCACTCTCTCAGTGA+TGG + chr7.1:27172525-27172544 MS.gene50959:intron 45.0%
TAGCAATAAATGCGGGAGGA+AGG + chr7.1:27174432-27174451 MS.gene50959:intron 45.0%
TCAAATATGCAACCTGGGCT+AGG + chr7.1:27172957-27172976 MS.gene50959:intron 45.0%
TCAATCCACACGTACCAATG+TGG + chr7.1:27174309-27174328 MS.gene50959:intron 45.0%
TCATGTTAACCGGTGTTCTC+CGG + chr7.1:27172768-27172787 MS.gene50959:intron 45.0%
TCCTCAACTTACACAGCTAG+AGG + chr7.1:27174333-27174352 MS.gene50959:intron 45.0%
TCCTCTAGCTGTGTAAGTTG+AGG - chr7.1:27174337-27174356 None:intergenic 45.0%
TCTTGAACCACACAACCAGA+AGG - chr7.1:27171842-27171861 None:intergenic 45.0%
TGCATTGCGGGAATATCTAC+CGG - chr7.1:27176135-27176154 None:intergenic 45.0%
TGTGTAGCAATAAATGCGGG+AGG + chr7.1:27174428-27174447 MS.gene50959:intron 45.0%
TTACCAGATGGACATAGCGA+CGG + chr7.1:27176216-27176235 MS.gene50959:CDS 45.0%
TTAGCAAGGGTCTATAGAGC+TGG - chr7.1:27174170-27174189 None:intergenic 45.0%
TTAGTGCAGCAACCTCAGTT+TGG + chr7.1:27174624-27174643 MS.gene50959:CDS 45.0%
TTATGTTGCGCTTCTTCCGT+CGG + chr7.1:27176182-27176201 MS.gene50959:CDS 45.0%
TTCTAAGCTTCTCGTTGCGA+AGG - chr7.1:27174682-27174701 None:intergenic 45.0%
TTTGCAAGCAGCATGCAGAA+GGG + chr7.1:27171732-27171751 MS.gene50959:CDS 45.0%
! AAGGAAGAGTGTGGATGATC+CGG + chr7.1:27174580-27174599 MS.gene50959:CDS 45.0%
! CAGTTGTAGAGCACCATTTC+TGG - chr7.1:27171506-27171525 None:intergenic 45.0%
! CATAACACCGTGGGTTATTG+TGG - chr7.1:27174402-27174421 None:intergenic 45.0%
! CATTGGTACGTGTGGATTGA+TGG - chr7.1:27174309-27174328 None:intergenic 45.0%
! CTAAGCTTAGGCATGGGTTT+TGG + chr7.1:27174186-27174205 MS.gene50959:CDS 45.0%
! TCTGAGGCTTCTAGAGAAAG+TGG + chr7.1:27170891-27170910 MS.gene50959:CDS 45.0%
! TGAACTTGCTTTGGCTGCAA+TGG + chr7.1:27170728-27170747 MS.gene50959:CDS 45.0%
! TTTTGCAAGCAGCATGCAGA+AGG + chr7.1:27171731-27171750 MS.gene50959:CDS 45.0%
!! AGCGAGTGGATCACTTTTGA+CGG + chr7.1:27176272-27176291 MS.gene50959:CDS 45.0%
!! GACATTCACATTGGTGTTGG+AGG - chr7.1:27174233-27174252 None:intergenic 45.0%
!! GATCCTTAACTTGTGCCCTT+AGG + chr7.1:27172713-27172732 MS.gene50959:intron 45.0%
!! AATTAAAATAATATTCTTAT+AGG - chr7.1:27173225-27173244 None:intergenic 5.0%
!! ATTAAAATAATATTCTTATA+GGG - chr7.1:27173224-27173243 None:intergenic 5.0%
AAACAAGCACAGACGCATCG+GGG + chr7.1:27176091-27176110 MS.gene50959:CDS 50.0%
AAAGCTCACGGTGGAATCAG+TGG + chr7.1:27176332-27176351 MS.gene50959:CDS 50.0%
AACTGTAGGAGGCTTCCTTC+TGG + chr7.1:27171824-27171843 MS.gene50959:CDS 50.0%
ACACTTGCCGGCAAGTTTCT+AGG + chr7.1:27170504-27170523 MS.gene50959:CDS 50.0%
ACCAGCTGAAGCTTCTCTGA+TGG - chr7.1:27171789-27171808 None:intergenic 50.0%
ACCATCAGAGAAGCTTCAGC+TGG + chr7.1:27171785-27171804 MS.gene50959:CDS 50.0%
ACCCATGCCTAAGCTTAGCA+AGG - chr7.1:27174184-27174203 None:intergenic 50.0%
ACCCTTGCTAAGCTTAGGCA+TGG + chr7.1:27174179-27174198 MS.gene50959:CDS 50.0%
ACCTCACGAACAGGAACCAA+TGG - chr7.1:27171698-27171717 None:intergenic 50.0%
AGGATCCACATTGGTACGTG+TGG - chr7.1:27174317-27174336 None:intergenic 50.0%
CACGGTGGAATCAGTGGAAA+CGG + chr7.1:27176338-27176357 MS.gene50959:CDS 50.0%
CCCATGCCTAAGCTTAGCAA+GGG - chr7.1:27174183-27174202 None:intergenic 50.0%
CCCTTGCTAAGCTTAGGCAT+GGG + chr7.1:27174180-27174199 MS.gene50959:CDS 50.0%
CTCTTGCATTGGACCACCAT+TGG - chr7.1:27174723-27174742 None:intergenic 50.0%
GAAACAAGCACAGACGCATC+GGG + chr7.1:27176090-27176109 MS.gene50959:CDS 50.0%
GACCGAGTTTGTACACTTGC+CGG + chr7.1:27170492-27170511 MS.gene50959:CDS 50.0%
GAGATGGCTCACATTGCCAA+AGG + chr7.1:27174740-27174759 MS.gene50959:CDS 50.0%
GCATACACTAGCTCGTAGGA+GGG - chr7.1:27174789-27174808 None:intergenic 50.0%
GGAGTGGTAATCACGATGAC+GGG + chr7.1:27176238-27176257 MS.gene50959:CDS 50.0%
GGGAGTGGTAATCACGATGA+CGG + chr7.1:27176237-27176256 MS.gene50959:CDS 50.0%
GGTGGAGCATGCAGAATATG+AGG + chr7.1:27174131-27174150 MS.gene50959:CDS 50.0%
GTAATGTTAACCGGTGCTCC+CGG - chr7.1:27172919-27172938 None:intergenic 50.0%
GTTGCCATGGTCATGTCCTT+TGG - chr7.1:27174759-27174778 None:intergenic 50.0%
TACCAGATGGACATAGCGAC+GGG + chr7.1:27176217-27176236 MS.gene50959:CDS 50.0%
TACCTGAGTGTTCTCTAGCG+GGG - chr7.1:27174281-27174300 None:intergenic 50.0%
TATGATGCAGGTGACATGGG+TGG + chr7.1:27174113-27174132 MS.gene50959:intron 50.0%
TATGTTGCGCTTCTTCCGTC+GGG + chr7.1:27176183-27176202 MS.gene50959:CDS 50.0%
TGCATACACTAGCTCGTAGG+AGG - chr7.1:27174790-27174809 None:intergenic 50.0%
TGCCGGCAAGTGTACAAACT+CGG - chr7.1:27170497-27170516 None:intergenic 50.0%
TGGGACATACTCTCCAATGG+TGG + chr7.1:27174707-27174726 MS.gene50959:CDS 50.0%
TGGTGGTCCAATGCAAGAGA+TGG + chr7.1:27174724-27174743 MS.gene50959:CDS 50.0%
TGTCGTTGAGTCAACTTGCC+AGG + chr7.1:27173530-27173549 MS.gene50959:intron 50.0%
TTGCAAGCAGCATGCAGAAG+GGG + chr7.1:27171733-27171752 MS.gene50959:CDS 50.0%
! AATCAATGATCCGGGAGCAC+CGG + chr7.1:27172906-27172925 MS.gene50959:intron 50.0%
! AGGAAGAGTGTGGATGATCC+GGG + chr7.1:27174581-27174600 MS.gene50959:CDS 50.0%
! GTTGACTCAACGACAGACCA+AGG - chr7.1:27173525-27173544 None:intergenic 50.0%
! TGCCCTAAGGGCACAAGTTA+AGG - chr7.1:27172719-27172738 None:intergenic 50.0%
! TGTTCTCCGGACACTGGTTA+AGG + chr7.1:27172781-27172800 MS.gene50959:intron 50.0%
!! TCCATTGGTTCCTGTTCGTG+AGG + chr7.1:27171694-27171713 MS.gene50959:CDS 50.0%
AACCAGTGTCCGGAGAACAC+CGG - chr7.1:27172780-27172799 None:intergenic 55.0%
AGCAGCATGCAGAAGGGGTA+TGG + chr7.1:27171738-27171757 MS.gene50959:CDS 55.0%
CACCGTCGATGCACAAACTC+CGG - chr7.1:27174504-27174523 None:intergenic 55.0%
GAATGTGGGCGAGGACGTTA+GGG + chr7.1:27174550-27174569 MS.gene50959:CDS 55.0%
GCACTAAGCACAATCCCTGG+TGG - chr7.1:27174611-27174630 None:intergenic 55.0%
GCTGCACTAAGCACAATCCC+TGG - chr7.1:27174614-27174633 None:intergenic 55.0%
GGGAACCATCACTGAGAGAG+TGG - chr7.1:27172533-27172552 None:intergenic 55.0%
GGTTTCGCCGTGTTACCAGA+TGG + chr7.1:27176204-27176223 MS.gene50959:CDS 55.0%
TGAAGCGGGTAGCCAAACTG+AGG - chr7.1:27174639-27174658 None:intergenic 55.0%
TGCCGGAGTTTGTGCATCGA+CGG + chr7.1:27174499-27174518 MS.gene50959:CDS 55.0%
TGGACGGCCTAGAAACTTGC+CGG - chr7.1:27170514-27170533 None:intergenic 55.0%
! GAGGCTTCCTTCTGGTTGTG+TGG + chr7.1:27171832-27171851 MS.gene50959:CDS 55.0%
! GCAGCATGCAGAAGGGGTAT+GGG + chr7.1:27171739-27171758 MS.gene50959:CDS 55.0%
! GTGCATCGACGGTGCACAAA+TGG + chr7.1:27174510-27174529 MS.gene50959:CDS 55.0%
!! GGGTTTTGGCGCACAACGTT+GGG + chr7.1:27174200-27174219 MS.gene50959:CDS 55.0%
!! TGGGTTTTGGCGCACAACGT+TGG + chr7.1:27174199-27174218 MS.gene50959:CDS 55.0%
AACCGGTGTTCTCCGGACAC+TGG + chr7.1:27172775-27172794 MS.gene50959:intron 60.0%
ACAATCCCTGGTGGCTCACC+CGG - chr7.1:27174602-27174621 None:intergenic 60.0%
ATGATCCGGGTGAGCCACCA+GGG + chr7.1:27174594-27174613 MS.gene50959:CDS 60.0%
CCTTCCGACGGCAAAGCTCA+CGG + chr7.1:27176320-27176339 MS.gene50959:CDS 60.0%
CTCCCCGCTAGAGAACACTC+AGG + chr7.1:27174276-27174295 MS.gene50959:CDS 60.0%
CTCCCGTCGCTATGTCCATC+TGG - chr7.1:27176222-27176241 None:intergenic 60.0%
GATGGACATAGCGACGGGAG+TGG + chr7.1:27176222-27176241 MS.gene50959:CDS 60.0%
GGAATGTGGGCGAGGACGTT+AGG + chr7.1:27174549-27174568 MS.gene50959:CDS 60.0%
GGAGGGAGACACAGTTGCCA+TGG - chr7.1:27174772-27174791 None:intergenic 60.0%
GGTAACACGGCGAAACCCGA+CGG - chr7.1:27176201-27176220 None:intergenic 60.0%
TCCACCGTGAGCTTTGCCGT+CGG - chr7.1:27176327-27176346 None:intergenic 60.0%
! TGCAGAAGGGGTATGGGCAG+TGG + chr7.1:27171745-27171764 MS.gene50959:CDS 60.0%
!! ATCACGATGACGGGTCGCAG+CGG + chr7.1:27176247-27176266 MS.gene50959:CDS 60.0%
!! GAGAGGAAGCATCCTAGCCC+AGG - chr7.1:27172972-27172991 None:intergenic 60.0%
!! GTCGCTTGTTGTGTACGCGC+CGG + chr7.1:27176113-27176132 MS.gene50959:CDS 60.0%
CCGTGAGCTTTGCCGTCGGA+AGG - chr7.1:27176323-27176342 None:intergenic 65.0%
GATGATCCGGGTGAGCCACC+AGG + chr7.1:27174593-27174612 MS.gene50959:CDS 65.0%
GGATGCAGGGAATGTGGGCG+AGG + chr7.1:27174541-27174560 MS.gene50959:CDS 65.0%
TCCGACGGCAAAGCTCACGG+TGG + chr7.1:27176323-27176342 MS.gene50959:CDS 65.0%
GGGTCGCAGCGGAGAGCGAG+TGG + chr7.1:27176258-27176277 MS.gene50959:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 27169610 27176422 27169610 ID=MS.gene50959
chr7.1 mRNA 27169610 27176422 27169610 ID=MS.gene50959.t1;Parent=MS.gene50959
chr7.1 exon 27169610 27169842 27169610 ID=MS.gene50959.t1.exon1;Parent=MS.gene50959.t1
chr7.1 CDS 27169610 27169842 27169610 ID=cds.MS.gene50959.t1;Parent=MS.gene50959.t1
chr7.1 exon 27169936 27170053 27169936 ID=MS.gene50959.t1.exon2;Parent=MS.gene50959.t1
chr7.1 CDS 27169936 27170053 27169936 ID=cds.MS.gene50959.t1;Parent=MS.gene50959.t1
chr7.1 exon 27170300 27170962 27170300 ID=MS.gene50959.t1.exon3;Parent=MS.gene50959.t1
chr7.1 CDS 27170300 27170962 27170300 ID=cds.MS.gene50959.t1;Parent=MS.gene50959.t1
chr7.1 exon 27171424 27171525 27171424 ID=MS.gene50959.t1.exon4;Parent=MS.gene50959.t1
chr7.1 CDS 27171424 27171525 27171424 ID=cds.MS.gene50959.t1;Parent=MS.gene50959.t1
chr7.1 exon 27171668 27171883 27171668 ID=MS.gene50959.t1.exon5;Parent=MS.gene50959.t1
chr7.1 CDS 27171668 27171883 27171668 ID=cds.MS.gene50959.t1;Parent=MS.gene50959.t1
chr7.1 exon 27174123 27174297 27174123 ID=MS.gene50959.t1.exon6;Parent=MS.gene50959.t1
chr7.1 CDS 27174123 27174297 27174123 ID=cds.MS.gene50959.t1;Parent=MS.gene50959.t1
chr7.1 exon 27174435 27174802 27174435 ID=MS.gene50959.t1.exon7;Parent=MS.gene50959.t1
chr7.1 CDS 27174435 27174802 27174435 ID=cds.MS.gene50959.t1;Parent=MS.gene50959.t1
chr7.1 exon 27176051 27176422 27176051 ID=MS.gene50959.t1.exon8;Parent=MS.gene50959.t1
chr7.1 CDS 27176051 27176422 27176051 ID=cds.MS.gene50959.t1;Parent=MS.gene50959.t1
Gene Sequence

>MS.gene50959

CAAACAAATATAGAAGCACAAGGTGGTGATATGAAGAGATTAATGGCAGAAAATTTCCATCAAACAAATAATGGTTTGAGAAGGAATAGAGAAGAAGAAGAACATGAAAGCTGCAGATCTGGTAGTGATAACATGGATGGTATTTCTGGTGATGATTTTGATGCTGCCGACAATCCACCAAGAAAAAAACGTTATCACCGACACACTCCTCAACAAATTCAAGAACTTGAATCGTATGTATCATAATTTCCTTCATAAAAAAGTTCATCTTTTTTATGAAGTTTATAAAAAATAATTGTTTGGTTTTTGTCTTTTATATTTTGTAGGATGTTTAAAGAGTGTCCTCACCCTGATGAAAAACAAAGACTTGAACTTAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTCAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGGTAACCAAAAAAACACTTTCCAAAAGTCTTTGTATTCACATGGAATAGTATCTTTTTCTTTTGGAGTTCAATATTTTCATACGGCTCCTAGAAGAAGAAAAAAAAAGTTGAAATAGCAACATAAATTTAGAAACAAAAAATGGTAAAAACCGGTCTCTAATTTTATTTTTTTCGTCTCTAATTTTTGTCGTTATTTCAACTTTTTCTAATTTTGTCGCTAATTTTATTTTTTGTTGATTATATCAGACTCAATTGGAACGTCACGAGAATTCACTACTTAGGCAAGCAAATGATAAATTAAGAGCTGAGAACATGTCAATAAGAGAAGCAATGAGGAATCCAATGTGTTCAAATTGTGGAGGACCAGCAATTATTAGTGAAATTTCACTTGAAGAACAACATCTAAGAATTGAGAATGCAAGATTAAAAGATGAATTAGACCGAGTTTGTACACTTGCCGGCAAGTTTCTAGGCCGTCCAATTACGTCGTTACCAAACTCGAGTTTAGAAACTGGTTTTGTTGGTTTGAACAATACTTTGCCTTCAACAATGCCTTTAGGTCAAGATTTTGGCATGGTGTCAATGTCACCACCTTCAATTACAAGAGGAACAAATATGGTAACAAATACTAATAGTAATGGTTTTGATAGATCAATGGAGAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCAATGGATGAGTTAGTGAAGATGGCACAAACTAATGAGCCTCTTTGGATTAGAAGTGTTGAAAGTGGAAAAGAAATTTTTAATCATGAGGAATATACAAGGATTATTAGTACTCCTTGTATTGGTTTAAAACCAAATGGTTTTGTTTCTGAGGCTTCTAGAGAAAGTGGTGTTGTTATCATAAACAGCTTGGCTCTTGTTGAAACTTTAATGGATTCAGTAAGCCTTTTTCAACTACTTCATTCAATTTTCTCCAACTTCTCTTCTTAGCCTTTCAATCATTCTTGGCTTAGGATGATTTATTTATTTTTTTCATTTTACTTGGATGAATATATTTAGTACTATACTAGAATTCATTAAGAAAAAATTGAAGAAATGAAAATTATTATTAATACCTGTAACACTAATGACTACTCCAATATTTACAATTATCTCATGTTTAATTTGAACTATGTCATGGAGGTTAGTAATCAAGCTATTTTTTACTACTAGTTTACTACTACAAAATATTTTAGAAACTAGAAAGCAATTTGTATGATGATAAAATTATCATAGACAAATTTTATATTTTGTCTTAATAAATTTATGTTGCAAATATAATTTTTTAGTGGTGATTTATTAATAATAATATATATTAAATTGTTGTACTTGAAACTGATTTTGTTTCTGTTGTATAACAGAATCGATGGTCAGAGATGTTCCCTTGTGTGATTGCAAGAAGCTCCACAACTGAAGTGATATCTAGTGGAATAAATGGAACCAGAAATGGTGCTCTACAACTGGTATATAAATTATAAATTATATAGTACATAAACAGAAATTTTTCCATTAATACTATAATGTTTTAGTTACCTTTTATTTTCATCACTTTAAAAATACTTCTATATATTTTTGTTTTAGCTTATGAAATTTATTTGTTTACAGATGCAAGCTGAACTTCAAGTACTTTCTCCATTGGTTCCTGTTCGTGAGGTGAGTTTTCTAAGGTTTTGCAAGCAGCATGCAGAAGGGGTATGGGCAGTGGTTGATGTGTCCATAGATACCATCAGAGAAGCTTCAGCTGGTGCACCCACTTTTCTTAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTAATTAAAAAAAAAAAAAAAAACTCGTTAGCAAAACCCTTTTATAAAATACATGATGCGATGCCAATAGATGTATATAAAAAATTTACATTATTAGTTTATACAAATTAAAATTGAAATAGCGACGAAAATTTAAATAATGACGTAAAGTTAGTAACACAAAAATGCAAAATTAGCTTCTAACATTGGTTTACATGTTAGGGACATAATTTTTAGAAACCAATTTTGTATTTTTCATCTCTAATTTATGTTGTTTTTTCAATTTTTTCTAGTAGTGTGAATCATTTTATTTTATGTTTCAATTTACTGCATTTTTACCTTCCCAAATTCCAAAAAGTAATAAAGGATTCACAATCTGTCAAAAGTTGTATCCTAATAATTTTTGTAATATATGTAAAGGACACATATATAGTAAACCGTACTACTATCTCAACTGTTTTTTTTTCATCACATTTATTTATTTATTTATTTCAAGTTGGTGTACAAGTAATTGAAACATGGTAGCTGAATTGAGCAATATTTTAAAGTTGGGGAGGGGGAAAACACAAAGCTAAGGAATCATGGAGCTTTTGCTTTCCCAAGCAACTTAGAAAGCTCATGGTTCAAAGTAATATTTCAGCTTGTTTAGTGAGTATTCACTATAGAACCACTCTCTCAGTGATGGTTCCCATGTTATTAATTTTTTAAGGAAAATGTTAACTTGTGCCCTTAAGACACAAGTTTAAAAGCCAAAAGTAGAAACTTAATTTTGGAAATCGTGCATTCAATCTCTTAAAAGCATAAAAACTTATTTTTTCAATACAAGACACATGTTTTAATTCTTCTTTTAGATCCTTAACTTGTGCCCTTAGGGCACAAGTTAACATGACCCATTTTATAATGGGTCATGTTAACCGGTGTTCTCCGGACACTGGTTAAGGAAACTAAGAAAAGGAAGTTTTAAAATGAAAATAACATTTTTTATGTTTTATAAGAGTTAACAACAAAAGTTTCAATGTAATACTTAATACATTTGATTTCTTAATCAATGATCCGGGAGCACCGGTTAACATTACCCTTTTATAATTAGTCTCTCAAATATGCAACCTGGGCTAGGATGCTTCCTCTCTTGTGTCTATCACAAAAATTATTTGAGTGATGAACACATCAATGTAGGTGAAATCTAGGTGAATCCATTAATTTAATCATGGAAGTCTCCATCACTTAAATTTTGGTAGCTGCATGAACACATTAATTACAAACCTTTTAAATAATTAATTTGTTGTTTTTTTAACTTTATCACATTCTATAAAAAAAATCATATGATGTTTCTATTCCAATCTCTCATGCAGGTTGTTCCCTATAAGAATATTATTTTAATTCATGAAATTGTGTGACCTGGTTTTGAACCCTATAAAAACATATAGGTCAGTTATATAATATATTCAATGTGGACCCTTTGAATCAAGATAATAGACTGAATATTTTGTCTTTTTGCTATAAGTGTTTGGGATGAGTTCACCACACTGCAAAATATAGCAAATCTCGATGAACCTAATTTTATATTGCACGTAGCTTCTCTAAAATCCCGGATGATGACTTTATCTAGTAGTACCATTATTTTATGTATGTACTTGCTCGATCTCCATAAGATAGATACCTTGGTCTGTCGTTGAGTCAACTTGCCAGGCTTTCTCCAAGATTTTCTGTTCATACTTGTACATCATGGTCCATGAATCATGTTCATAATCAATCAGCAGCTTCCTTCATTCCTGTTCAACATGTGTGAATGATGACAGCTTAGATACATCGTGAGAACGATAAAATTACCGCGAATACTCGTGATTTTGCCAAATTATAGTATATATGGGCTTTAATAAAATGACCATGTCACCGTAATCTTGTGAAACACATCGTGATTTCAAATATAACTACTAATTTCAGGAAAATTTAATAACTCGATTATTTAGAAGGATGCGTCGGACCATTATTAAAGCTTAGACTATGAAATTTGTAACGGACTTGGATCTTCTATAGCAGTTGTAGAATCATTAATTCTGATTGTAAGATTCAACAATAATAACTTACATTTAGATCTAATAGCTAACAATTATGTTGTGGTGCAGCTGTTGTAGATAAAAAAAAAAATTATGTTTACAATAAACTTCGCAAAGTTGGGATTTCATGAATATGGTAGGAAAATGAGCATGGTAATGGTATAACTAATAACATGGTTGATTTACATGAACATATGATGCAGGTGACATGGGTGGAGCATGCAGAATATGAGGAAAGCCAAGTTCACCAGCTCTATAGACCCTTGCTAAGCTTAGGCATGGGTTTTGGCGCACAACGTTGGGTTGCAACCCTCCAACACCAATGTGAATGTCTAGCCATCTTAATGTCATCATCACTCCCCGCTAGAGAACACTCAGGTATATATCCATCAATCCACACGTACCAATGTGGATCCTCAACTTACACAGCTAGAGGATTCAAACACCATACACACACACATTTAACAAAATGTATTTGTCCACAATAACCCACGGTGTTATGTTCCTATGTGTAGCAATAAATGCGGGAGGAAGGCGTAGCATGCTAAAGCTAGCGCACCGAATGACAAACAACTTTTGTGCCGGAGTTTGTGCATCGACGGTGCACAAATGGAACAAATTGGATGCAGGGAATGTGGGCGAGGACGTTAGGGTAATGACAAGGAAGAGTGTGGATGATCCGGGTGAGCCACCAGGGATTGTGCTTAGTGCAGCAACCTCAGTTTGGCTACCCGCTTCACCACAAAAAGTCTTTGATTTCCTTCGCAACGAGAAGCTTAGAAGTGAATGGGACATACTCTCCAATGGTGGTCCAATGCAAGAGATGGCTCACATTGCCAAAGGACATGACCATGGCAACTGTGTCTCCCTCCTACGAGCTAGTGTATGCATATTCTTCCATCTTCAATATCATTTTCTTATAATATTTTGAGTTAAAATTAGATTTTTGAATTTTAGAATTCGTTTAGTGTTTTCTTATCTTTATTTTCCAAACTAATACCATAATTAAGTGTTTTTTATTACAATAATCAAGTGTTTTAAAAAATGGTTGACATGATTAGAAGATTAAAAAAAATAAATTTTATTTAGAATTTAATTATCATATATTACTAAAAAAATTGTATACAAAAATTTAGAGACAAAGACTTAAAGATGTATAAATATAATTTTTCATCTATAAATTTTATGTAAATATTTTATAAAACCATATTATTGCCGAACATTACCATAGTGAAATATGATTCAATTTGAGCTATTTATTTATGGGTCTTGCTAACTAGTGTCTTCAGGACAATGGTTAAGGAAACCAAAGTAGTATATTTACATTGAATTCAACAATGTTTTGACTTTTAAAAAGTTAAATTCTCCACTTTTCACCATTTTTCAATGCAATGTTTCTATTTTTATCATCTTAACCAATACCCCAAGGACACTATTTAGCATTTCCCTTTGTTTATATATGATCAAACTTTCTAAATTGATTGTAACAAAAAAAAAAAAAAAACTTTCTAAACTGAAATTTAGAAATGAATGGTGTACGTTTTACTATTATTGATTTGATTGTTGTATGACGAGATAACGTTTTCAAGAGAAGAAGAAACGTGAATCTTGTTTTGTCGCGTAGTCATTGGATGAAAAGGTGAAATTGAGAAGGACAGGGTTGAAAATATTTGGAAACATCTATGAAGACAATTTGTAACAGAAAAGGGAAGCGTTTGTTTCAGCAAATTTTTCCAAAAAGTCAAAATCTGAAACTTTTGTCAACTTCCTACATTTTTCTAACTTTTGAGTTCTGACCTCATTCTTTTAACCTAAATTTTGATGTTTAGAAAAAGAAAACAAAAAATGTGGTACCAAGGTTTGACTTATTGACTACTCTCCAACCCTAAAACTTAACGAAAAAGACAACACATAAAATATAAATATTAATTTCGAAAAACATTCTTATATCATGAAATTTTGTTGGATATTTATTTTATCATTCAATTATTTATTTAATGTCATATCATCTTCTAATATTTAATTATTTCAAGCTAAATTAAAATTTGAATTGATTTTAGTTAAAAACCAACAAAACTCTAAAAATCAAATAATTTTTCATTTTCTTAACGTTGTTTTTTTCTCTTTGCAGGCTATTAATTCAAGTCAAAGTAGCATGTTGATTCTACAAGAAACAAGCACAGACGCATCGGGGTCGCTTGTTGTGTACGCGCCGGTAGATATTCCCGCAATGCATGTAGTAATGAACGGCGGCGATTCAGCTTATGTTGCGCTTCTTCCGTCGGGTTTCGCCGTGTTACCAGATGGACATAGCGACGGGAGTGGTAATCACGATGACGGGTCGCAGCGGAGAGCGAGTGGATCACTTTTGACGGTAGCATTCCAGATACTTGTGAATAGCCTTCCGACGGCAAAGCTCACGGTGGAATCAGTGGAAACGGTGAACAATCTCATTTCATGTACTATTCAAAAGATAAAAGTAGCACTTCAATGTGAGAGTTAA
Protein sequence

>MS.gene50959.t1

QTNIEAQGGDMKRLMAENFHQTNNGLRRNREEEEHESCRSGSDNMDGISGDDFDAADNPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIREAMRNPMCSNCGGPAIISEISLEEQHLRIENARLKDELDRVCTLAGKFLGRPITSLPNSSLETGFVGLNNTLPSTMPLGQDFGMVSMSPPSITRGTNMVTNTNSNGFDRSMERSMFLELALAAMDELVKMAQTNEPLWIRSVESGKEIFNHEEYTRIISTPCIGLKPNGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIREASAGAPTFLNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMGFGAQRWVATLQHQCECLAILMSSSLPAREHSAINAGGRRSMLKLAHRMTNNFCAGVCASTVHKWNKLDAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPASPQKVFDFLRNEKLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAINSSQSSMLILQETSTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVLPDGHSDGSGNHDDGSQRRASGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTIQKIKVALQCES