Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50962.t1 | XP_024637950.1 | 98.2 | 455 | 8 | 0 | 3 | 457 | 1 | 455 | 2.50E-246 | 861.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50962.t1 | O04658 | 81.3 | 444 | 83 | 0 | 3 | 446 | 1 | 444 | 2.1e-206 | 719.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50962.t1 | G7JIJ7 | 98.2 | 455 | 8 | 0 | 3 | 457 | 1 | 455 | 1.8e-246 | 861.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049361 | MS.gene50962 | 0.811521 | 6.72E-51 | -1.69E-46 |
| MS.gene057730 | MS.gene50962 | 0.810337 | 1.21E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 126 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAAAGAAAAGAAGAAAA+AGG | 0.230780 | 4.2:+36310341 | MS.gene50962:CDS |
| GGCTATCAGGTGTGATGCAC+TGG | 0.262961 | 4.2:+36309873 | MS.gene50962:CDS |
| CAAAGACTGCTTTGGCTATC+AGG | 0.264189 | 4.2:+36309860 | MS.gene50962:CDS |
| CCCAACCATAGCAGTCAAAT+TGG | 0.271023 | 4.2:-36309620 | None:intergenic |
| TTCTTAACAACTTCCTCTTC+TGG | 0.306909 | 4.2:-36310402 | None:intergenic |
| TTTCTCCTCCATTCGAAGTA+TGG | 0.312200 | 4.2:-36310479 | None:intergenic |
| TTGTCATATGCTTCGATCTT+GGG | 0.331868 | 4.2:-36310082 | None:intergenic |
| GGTAGTACCGTGCAGATTCT+TGG | 0.334079 | 4.2:+36309706 | MS.gene50962:CDS |
| ACTTGACAGATCTTGCATAT+TGG | 0.338912 | 4.2:-36309139 | None:intergenic |
| GAGTATCATTAAGGATAAAT+TGG | 0.339774 | 4.2:+36306829 | MS.gene50962:CDS |
| CTTGTCATATGCTTCGATCT+TGG | 0.340268 | 4.2:-36310083 | None:intergenic |
| GATGTTGTCAACTATGATTT+TGG | 0.347858 | 4.2:-36309117 | None:intergenic |
| GCTAAACTTCAGCTTGTATC+TGG | 0.349651 | 4.2:-36307069 | None:intergenic |
| CGCTTTGCCGGTTCTGCTAA+AGG | 0.358145 | 4.2:+36310055 | MS.gene50962:CDS |
| ACTATGATCGTTCAGGCTAT+TGG | 0.363794 | 4.2:+36309011 | MS.gene50962:CDS |
| ATATCAATGGGAACTGAAAT+TGG | 0.371359 | 4.2:+36309487 | MS.gene50962:CDS |
| GGCCTAGTTCTTTGCCTTCA+AGG | 0.381274 | 4.2:-36310033 | None:intergenic |
| ATTTACCATGCATCCTTGAT+TGG | 0.385846 | 4.2:+36309790 | MS.gene50962:CDS |
| GAAAGTAAAGAAAGAAAAGA+AGG | 0.394518 | 4.2:+36310317 | MS.gene50962:CDS |
| GTCAGAGGAGGTTGAGGCAG+AGG | 0.395543 | 4.2:+36309447 | MS.gene50962:CDS |
| AAAGCTTGGGAGTATCATTA+AGG | 0.404387 | 4.2:+36306820 | MS.gene50962:CDS |
| CCATGCATCCTTGATTGGTC+AGG | 0.410857 | 4.2:+36309795 | MS.gene50962:CDS |
| GCAGCTACTTTGCTAATTGA+TGG | 0.411124 | 4.2:+36306725 | MS.gene50962:CDS |
| AAAGAACTAGGCCGCTTTGC+CGG | 0.414173 | 4.2:+36310043 | MS.gene50962:CDS |
| CCAATTTGACTGCTATGGTT+GGG | 0.414603 | 4.2:+36309620 | MS.gene50962:CDS |
| GCTATGGTTGGGGAGCTTGT+TGG | 0.416805 | 4.2:+36309631 | MS.gene50962:CDS |
| AAAAGGCAGAGGTGCAGAAT+GGG | 0.421248 | 4.2:+36310454 | MS.gene50962:CDS |
| TGAGACAAACCCAAGCTCAT+AGG | 0.424290 | 4.2:-36307038 | None:intergenic |
| TTGTCAGTAACAGGAGGCTC+TGG | 0.426836 | 4.2:-36310291 | None:intergenic |
| TGTTCACAACAATGCTGTTA+TGG | 0.427408 | 4.2:+36306947 | MS.gene50962:CDS |
| TATTAGAGAGCTCTGTGATC+AGG | 0.429227 | 4.2:+36309528 | MS.gene50962:CDS |
| GGGCTTCCCTTTAGCAGAAC+CGG | 0.437955 | 4.2:-36310062 | None:intergenic |
| CTTTGGTTCAATAACTGAAT+CGG | 0.444467 | 4.2:-36310241 | None:intergenic |
| AGCTAATAATATACCTTAGC+TGG | 0.444788 | 4.2:-36310139 | None:intergenic |
| CACTGCAGATGCTGCTAGAA+AGG | 0.446366 | 4.2:+36306480 | MS.gene50962:CDS |
| TCCATTGCAGAATTAGACTT+TGG | 0.447306 | 4.2:-36310258 | None:intergenic |
| TGCAGCTTGAAGCACGTTTG+AGG | 0.448590 | 4.2:+36310008 | MS.gene50962:intron |
| GGTGGATACTATGATCGTTC+AGG | 0.449376 | 4.2:+36309004 | MS.gene50962:intron |
| AAGCATGCTACTCCAAAGTA+TGG | 0.450023 | 4.2:+36309763 | MS.gene50962:CDS |
| GACATGGCCCCTATGAGCTT+GGG | 0.453354 | 4.2:+36307029 | MS.gene50962:CDS |
| ACTTGCTGCAAAGACTGCTT+TGG | 0.456044 | 4.2:+36309852 | MS.gene50962:CDS |
| AGACATGGCCCCTATGAGCT+TGG | 0.460296 | 4.2:+36307028 | MS.gene50962:CDS |
| GAGGAAGAAGCAGGCAGAGG+AGG | 0.461221 | 4.2:+36310512 | MS.gene50962:CDS |
| GCAAGATAACACCATGGGAT+TGG | 0.463401 | 4.2:+36309903 | MS.gene50962:CDS |
| GCTTTGCCGGTTCTGCTAAA+GGG | 0.467457 | 4.2:+36310056 | MS.gene50962:CDS |
| GAGACAAACCCAAGCTCATA+GGG | 0.467946 | 4.2:-36307037 | None:intergenic |
| AAAGAAGGAATCTACTGAAA+AGG | 0.469310 | 4.2:+36310437 | MS.gene50962:CDS |
| AGTTCAAGGGGAAAATTTCT+CGG | 0.473372 | 4.2:+36309827 | MS.gene50962:CDS |
| TATGACAAGGATAGAAAGAA+AGG | 0.477667 | 4.2:+36310097 | MS.gene50962:CDS |
| AGCTGGAGTTATCAGTCCTC+CGG | 0.492874 | 4.2:-36310122 | None:intergenic |
| GGAGGTTGAGGCAGAGGTGA+AGG | 0.493001 | 4.2:+36309453 | MS.gene50962:CDS |
| CCAACCATAGCAGTCAAATT+GGG | 0.494028 | 4.2:-36309619 | None:intergenic |
| CAATTTGACTGCTATGGTTG+GGG | 0.494927 | 4.2:+36309621 | MS.gene50962:CDS |
| GGTGTTGCTGAGTCAAAGCT+TGG | 0.499283 | 4.2:+36306806 | MS.gene50962:CDS |
| CCCAATTTGACTGCTATGGT+TGG | 0.502179 | 4.2:+36309619 | MS.gene50962:CDS |
| TGCAAGATCTGTCAAGTTGA+TGG | 0.502281 | 4.2:+36309145 | MS.gene50962:CDS |
| AGTAGCTGCCTCTAGAGCTT+CGG | 0.504643 | 4.2:-36306711 | None:intergenic |
| TGGAGCGGCCTGACCAATCA+AGG | 0.509639 | 4.2:-36309803 | None:intergenic |
| GAAGCTTCAGTGATATCAAT+GGG | 0.510808 | 4.2:+36309475 | MS.gene50962:CDS |
| CACTTTGAAAATAGCAAACC+CGG | 0.515199 | 4.2:-36305987 | None:intergenic |
| GAAAAGGCAGAGGTGCAGAA+TGG | 0.516092 | 4.2:+36310453 | MS.gene50962:CDS |
| GTTTATTAAGCTTCCTCCGT+GGG | 0.518550 | 4.2:-36309668 | None:intergenic |
| CATTGTGAAAATGAAACGTT+AGG | 0.525745 | 4.2:+36306785 | MS.gene50962:CDS |
| GGAAGCTTCAGTGATATCAA+TGG | 0.526035 | 4.2:+36309474 | MS.gene50962:CDS |
| TGCACCCAATTTGACTGCTA+TGG | 0.526972 | 4.2:+36309615 | MS.gene50962:CDS |
| AATTGATGGCAAAGCTAGCA+AGG | 0.527868 | 4.2:+36306739 | MS.gene50962:CDS |
| AAAGAGGAAGAAGCAGGCAG+AGG | 0.529182 | 4.2:+36310509 | MS.gene50962:CDS |
| TACTGTTCGAAACACCGGCC+GGG | 0.531557 | 4.2:+36305969 | MS.gene50962:CDS |
| ATGCCATGAGGGTTCGTGAA+TGG | 0.538629 | 4.2:+36309069 | MS.gene50962:CDS |
| TACTACCAGGCTGCTTTGCA+AGG | 0.539634 | 4.2:-36309690 | None:intergenic |
| GCACGTTTGAGGAACCTTGA+AGG | 0.539843 | 4.2:+36310019 | MS.gene50962:CDS |
| ATACTTTGGAGTAGCATGCT+TGG | 0.539994 | 4.2:-36309761 | None:intergenic |
| TACATATATTTCGCTCTAGT+CGG | 0.544218 | 4.2:-36310589 | None:intergenic |
| AACCTTGAAGGCAAAGAACT+AGG | 0.547172 | 4.2:+36310031 | MS.gene50962:CDS |
| GGTGTGATGCACTGGGTGAC+GGG | 0.547776 | 4.2:+36309881 | MS.gene50962:CDS |
| CTACTGTTCGAAACACCGGC+CGG | 0.551002 | 4.2:+36305968 | MS.gene50962:CDS |
| TCAGGCCGCTCCAAAGTTCA+AGG | 0.553933 | 4.2:+36309813 | MS.gene50962:CDS |
| AGGAAAGCTTTCTAAAGTTG+AGG | 0.554316 | 4.2:+36306018 | MS.gene50962:CDS |
| AGGTGTGATGCACTGGGTGA+CGG | 0.555737 | 4.2:+36309880 | MS.gene50962:CDS |
| GGTGCTCGCCTCATTGCCCA+CGG | 0.556545 | 4.2:+36309652 | MS.gene50962:CDS |
| ATAAACCTTGCAAAGCAGCC+TGG | 0.557523 | 4.2:+36309685 | MS.gene50962:CDS |
| AAGGATAGAAAGAAAGGAGC+CGG | 0.559519 | 4.2:+36310103 | MS.gene50962:CDS |
| AGAATCTGCACGGTACTACC+AGG | 0.563552 | 4.2:-36309703 | None:intergenic |
| GTGTTGCTGAGTCAAAGCTT+GGG | 0.564280 | 4.2:+36306807 | MS.gene50962:CDS |
| GGAGGTTGAAGATGTTGTTG+AGG | 0.564937 | 4.2:+36310377 | MS.gene50962:CDS |
| AATGGGGACCATACTTCGAA+TGG | 0.572576 | 4.2:+36310471 | MS.gene50962:CDS |
| TCTATGATTATCTCAAGAGT+AGG | 0.573998 | 4.2:+36309581 | MS.gene50962:CDS |
| CAATTGAATGAACTCATAGC+AGG | 0.584388 | 4.2:+36306993 | MS.gene50962:CDS |
| ACCAAAGTCTAATTCTGCAA+TGG | 0.590650 | 4.2:+36310257 | MS.gene50962:CDS |
| GCTATCAGGTGTGATGCACT+GGG | 0.592574 | 4.2:+36309874 | MS.gene50962:CDS |
| GAATACTTCCGAAGCTCTAG+AGG | 0.594176 | 4.2:+36306703 | MS.gene50962:CDS |
| TGGTAAATGAGACCATACTT+TGG | 0.597333 | 4.2:-36309775 | None:intergenic |
| TGTTGTTGAGGAACCAGAAG+AGG | 0.598846 | 4.2:+36310389 | MS.gene50962:CDS |
| ATGAGGGTTCGTGAATGGTA+TGG | 0.601117 | 4.2:+36309074 | MS.gene50962:CDS |
| AGCTTCCTCCGTGGGCAATG+AGG | 0.601658 | 4.2:-36309660 | None:intergenic |
| CAGGCCGCTCCAAAGTTCAA+GGG | 0.602064 | 4.2:+36309814 | MS.gene50962:CDS |
| ATACCATTCACGAACCCTCA+TGG | 0.603195 | 4.2:-36309072 | None:intergenic |
| GGAATCTACTGAAAAGGCAG+AGG | 0.607137 | 4.2:+36310443 | MS.gene50962:CDS |
| GCTGAAGTTTAGCGCTGACA+AGG | 0.610350 | 4.2:+36307079 | MS.gene50962:CDS |
| GCTTCTACTGTTCGAAACAC+CGG | 0.613750 | 4.2:+36305964 | MS.gene50962:CDS |
| GGGATTGGAAAACAGAGCTA+AGG | 0.614620 | 4.2:+36309918 | MS.gene50962:CDS |
| GCAAGATCTGTCAAGTTGAT+GGG | 0.615767 | 4.2:+36309146 | MS.gene50962:CDS |
| TTGAAAATAGCAAACCCGGC+CGG | 0.617400 | 4.2:-36305983 | None:intergenic |
| GCTGAACACGTATGCCATGA+GGG | 0.618620 | 4.2:+36309058 | MS.gene50962:CDS |
| CCTGACCAATCAAGGATGCA+TGG | 0.619510 | 4.2:-36309795 | None:intergenic |
| AGGACTGATAACTCCAGCTA+AGG | 0.620619 | 4.2:+36310126 | MS.gene50962:CDS |
| CTCGGCACCAAGAATCTGCA+CGG | 0.631244 | 4.2:-36309713 | None:intergenic |
| AGGTCTAGCTGTTCAAGACA+TGG | 0.637643 | 4.2:+36307013 | MS.gene50962:CDS |
| GACGGGCAAGATAACACCAT+GGG | 0.638389 | 4.2:+36309898 | MS.gene50962:CDS |
| AGGCCGCTCCAAAGTTCAAG+GGG | 0.639325 | 4.2:+36309815 | MS.gene50962:CDS |
| TTTCCCCTTGAACTTTGGAG+CGG | 0.639830 | 4.2:-36309818 | None:intergenic |
| CAAGATCGAAGCATATGACA+AGG | 0.641584 | 4.2:+36310084 | MS.gene50962:CDS |
| GGTTTATTAAGCTTCCTCCG+TGG | 0.644646 | 4.2:-36309669 | None:intergenic |
| AGCTGAACACGTATGCCATG+AGG | 0.646581 | 4.2:+36309057 | MS.gene50962:CDS |
| CTTTCTAGCAGCATCTGCAG+TGG | 0.650736 | 4.2:-36306479 | None:intergenic |
| GGGGACCATACTTCGAATGG+AGG | 0.650803 | 4.2:+36310474 | MS.gene50962:CDS |
| ATTGATGGCAAAGCTAGCAA+GGG | 0.654528 | 4.2:+36306740 | MS.gene50962:CDS |
| GGGTTCGTGAATGGTATGGT+TGG | 0.660131 | 4.2:+36309078 | MS.gene50962:CDS |
| AAAGGCAGAGGTGCAGAATG+GGG | 0.668436 | 4.2:+36310455 | MS.gene50962:CDS |
| GATAGAAAGAAAGGAGCCGG+AGG | 0.682277 | 4.2:+36310106 | MS.gene50962:CDS |
| TGCAAAGCTTGATTTCTCTG+AGG | 0.684043 | 4.2:+36309184 | MS.gene50962:CDS |
| AGACAAACCCAAGCTCATAG+GGG | 0.697188 | 4.2:-36307036 | None:intergenic |
| GCTCGCCTCATTGCCCACGG+AGG | 0.703906 | 4.2:+36309655 | MS.gene50962:CDS |
| CTTTAGCAGAACCGGCAAAG+CGG | 0.708275 | 4.2:-36310054 | None:intergenic |
| TGACGGGCAAGATAACACCA+TGG | 0.727962 | 4.2:+36309897 | MS.gene50962:CDS |
| GCTGTTATGGAGTTGATGAG+AGG | 0.738756 | 4.2:+36306960 | MS.gene50962:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACACATAATTAAAAAGT+TGG | - | chr4.2:36307728-36307747 | None:intergenic | 15.0% |
| !! | TTGAAATGAAAAGAAAAAAA+TGG | - | chr4.2:36306298-36306317 | None:intergenic | 15.0% |
| !!! | ATCATAAAAACAGTTTTATT+CGG | + | chr4.2:36308667-36308686 | MS.gene50962:intron | 15.0% |
| !!! | ATTTTGTTTAAGAATAACTT+AGG | - | chr4.2:36306862-36306881 | None:intergenic | 15.0% |
| !!! | ATTTTTATCATTTTTTAACC+TGG | + | chr4.2:36307617-36307636 | MS.gene50962:intron | 15.0% |
| !!! | TATCTATATCTATTTGTTAT+TGG | - | chr4.2:36309268-36309287 | None:intergenic | 15.0% |
| !!! | TCAAATAGCTAATTTTTTAT+CGG | + | chr4.2:36306902-36306921 | MS.gene50962:intron | 15.0% |
| !!! | TGGTTTTAAAAAAAAAACAA+GGG | + | chr4.2:36307924-36307943 | MS.gene50962:intron | 15.0% |
| !!! | TTGGTTTTAAAAAAAAAACA+AGG | + | chr4.2:36307923-36307942 | MS.gene50962:intron | 15.0% |
| !!! | TTGTTTTTTTTTTAAAACCA+AGG | - | chr4.2:36307924-36307943 | None:intergenic | 15.0% |
| !!! | TTTGAATTTTGATATTATGT+TGG | + | chr4.2:36308339-36308358 | MS.gene50962:intron | 15.0% |
| !!! | TTTTCAAATTCAAAATGTAT+AGG | + | chr4.2:36306324-36306343 | MS.gene50962:intron | 15.0% |
| !!! | TTTTTAATTATGTGTAATAG+CGG | + | chr4.2:36307730-36307749 | MS.gene50962:intron | 15.0% |
| !! | AAACAAAATCACAACAAAAT+TGG | - | chr4.2:36308879-36308898 | None:intergenic | 20.0% |
| !! | AAAGAAAGAAAAGAAGAAAA+AGG | + | chr4.2:36310341-36310360 | MS.gene50962:CDS | 20.0% |
| !! | AACTCTATAAATATATATCC+AGG | - | chr4.2:36307638-36307657 | None:intergenic | 20.0% |
| !! | AATTGTAAGTCTCAATATTT+CGG | - | chr4.2:36308767-36308786 | None:intergenic | 20.0% |
| !! | TAAAACCTTTCATAAGATTT+AGG | + | chr4.2:36308424-36308443 | MS.gene50962:intron | 20.0% |
| !! | TATGCAATGAGTAAATTAAT+TGG | - | chr4.2:36309238-36309257 | None:intergenic | 20.0% |
| !! | TGGTAAAATATAAATTGGTT+AGG | - | chr4.2:36306426-36306445 | None:intergenic | 20.0% |
| !! | TTAACTAAAAATCAACTGTT+TGG | + | chr4.2:36307322-36307341 | MS.gene50962:intron | 20.0% |
| !!! | AATTATCAGTTCTTTTCTTT+AGG | + | chr4.2:36308287-36308306 | MS.gene50962:intron | 20.0% |
| !!! | ACTTTATGATGCTTTTTATT+AGG | + | chr4.2:36308983-36309002 | MS.gene50962:intron | 20.0% |
| !!! | CAAAATCTGAAATTTATTTC+AGG | - | chr4.2:36309428-36309447 | None:intergenic | 20.0% |
| !!! | GAAGTTGGTAAAATATAAAT+TGG | - | chr4.2:36306431-36306450 | None:intergenic | 20.0% |
| !!! | GGATTTAATGTTTTGAATTT+TGG | + | chr4.2:36308308-36308327 | MS.gene50962:intron | 20.0% |
| !!! | GGTGTTATTTAATTTTCTAT+TGG | + | chr4.2:36310168-36310187 | MS.gene50962:intron | 20.0% |
| !!! | TCATAAAAACAGTTTTATTC+GGG | + | chr4.2:36308668-36308687 | MS.gene50962:intron | 20.0% |
| !!! | TTTCGTAATGTTTTGAATTT+TGG | + | chr4.2:36308374-36308393 | MS.gene50962:intron | 20.0% |
| !!! | TTTTTATCTTTCTTTTTGCT+TGG | - | chr4.2:36310558-36310577 | None:intergenic | 20.0% |
| ! | AAAGAAGAAAAAGGAGAAAA+AGG | + | chr4.2:36310350-36310369 | MS.gene50962:CDS | 25.0% |
| ! | ATGAAAATGATGATCTAACT+TGG | + | chr4.2:36307982-36308001 | MS.gene50962:intron | 25.0% |
| ! | GAAAGAAAAGAAGAAAAAGA+AGG | + | chr4.2:36310422-36310441 | MS.gene50962:CDS | 25.0% |
| ! | GAAAGTAAAGAAAGAAAAGA+AGG | + | chr4.2:36310317-36310336 | MS.gene50962:CDS | 25.0% |
| ! | GAGTATCATTAAGGATAAAT+TGG | + | chr4.2:36306829-36306848 | MS.gene50962:CDS | 25.0% |
| ! | TAAATCCTGTATAAAGAAGT+TGG | - | chr4.2:36306446-36306465 | None:intergenic | 25.0% |
| ! | TCATGCAATCTTAAGAATAA+AGG | - | chr4.2:36307264-36307283 | None:intergenic | 25.0% |
| ! | TCCTAAAAGTTATGAAATAG+CGG | + | chr4.2:36308559-36308578 | MS.gene50962:intron | 25.0% |
| ! | TGAAAATGATGATCTAACTT+GGG | + | chr4.2:36307983-36308002 | MS.gene50962:intron | 25.0% |
| ! | TGCATTATTTCACTTTGATA+AGG | - | chr4.2:36307547-36307566 | None:intergenic | 25.0% |
| ! | TTTCACGTAAAATGAAATAG+CGG | - | chr4.2:36307889-36307908 | None:intergenic | 25.0% |
| !! | ATCATTTTCATGAAGTTGTT+AGG | - | chr4.2:36307973-36307992 | None:intergenic | 25.0% |
| !! | GGTATATTATTAGCTTCATT+TGG | + | chr4.2:36310147-36310166 | MS.gene50962:intron | 25.0% |
| !! | TAAATTTCAGATTTTGTCAG+AGG | + | chr4.2:36309432-36309451 | MS.gene50962:intron | 25.0% |
| !! | TCATTTTCATGAAGTTGTTA+GGG | - | chr4.2:36307972-36307991 | None:intergenic | 25.0% |
| !! | TTTTACCAACTTCTTTATAC+AGG | + | chr4.2:36306438-36306457 | MS.gene50962:intron | 25.0% |
| !!! | ATAAAAAGCATCATAAAGTC+AGG | - | chr4.2:36308982-36309001 | None:intergenic | 25.0% |
| !!! | CTGTATGATCTCTAAAATAT+AGG | + | chr4.2:36306174-36306193 | MS.gene50962:intron | 25.0% |
| !!! | TTATGATGCTTTTTATTAGG+TGG | + | chr4.2:36308986-36309005 | MS.gene50962:intron | 25.0% |
| !!! | TTGTTGTGATTTTGTTTGTA+TGG | + | chr4.2:36308882-36308901 | MS.gene50962:intron | 25.0% |
| AAAGAAGGAATCTACTGAAA+AGG | + | chr4.2:36310437-36310456 | MS.gene50962:CDS | 30.0% | |
| AAAGAAGTTAGGCACAAATA+TGG | + | chr4.2:36307198-36307217 | MS.gene50962:intron | 30.0% | |
| AAAGTGAAATAATGCAGTGA+GGG | + | chr4.2:36307551-36307570 | MS.gene50962:intron | 30.0% | |
| AACATGAAATTGAGAGGATA+AGG | - | chr4.2:36306530-36306549 | None:intergenic | 30.0% | |
| AACCACCTAAATCTTATGAA+AGG | - | chr4.2:36308432-36308451 | None:intergenic | 30.0% | |
| AACCTTTCATAAGATTTAGG+TGG | + | chr4.2:36308427-36308446 | MS.gene50962:intron | 30.0% | |
| ACACTAAGTGATGCAAAATT+AGG | + | chr4.2:36306649-36306668 | MS.gene50962:intron | 30.0% | |
| ACATGAAATTGAGAGGATAA+GGG | - | chr4.2:36306529-36306548 | None:intergenic | 30.0% | |
| AGCTAATAATATACCTTAGC+TGG | - | chr4.2:36310142-36310161 | None:intergenic | 30.0% | |
| ATATCAATGGGAACTGAAAT+TGG | + | chr4.2:36309487-36309506 | MS.gene50962:CDS | 30.0% | |
| ATTCCAACATTACATAGCAT+TGG | - | chr4.2:36308270-36308289 | None:intergenic | 30.0% | |
| CACATCATAGTAGTTAATAG+CGG | - | chr4.2:36308646-36308665 | None:intergenic | 30.0% | |
| CACTGTATTTATACTGTCTT+CGG | + | chr4.2:36306400-36306419 | MS.gene50962:intron | 30.0% | |
| CATTGTGAAAATGAAACGTT+AGG | + | chr4.2:36306785-36306804 | MS.gene50962:CDS | 30.0% | |
| CTGAATCTTTCAACATTTCT+AGG | + | chr4.2:36308807-36308826 | MS.gene50962:intron | 30.0% | |
| CTTACAATTCAATGTTCTTG+AGG | + | chr4.2:36308778-36308797 | MS.gene50962:intron | 30.0% | |
| GTAATTGTGAGAGAACAAAT+AGG | + | chr4.2:36307397-36307416 | MS.gene50962:intron | 30.0% | |
| TATGACAAGGATAGAAAGAA+AGG | + | chr4.2:36310097-36310116 | MS.gene50962:CDS | 30.0% | |
| TATTTCGGTTACCATTTACT+CGG | - | chr4.2:36308752-36308771 | None:intergenic | 30.0% | |
| TCCTCTTCACCATAATAATT+CGG | - | chr4.2:36308203-36308222 | None:intergenic | 30.0% | |
| TCTATGATTATCTCAAGAGT+AGG | + | chr4.2:36309581-36309600 | MS.gene50962:CDS | 30.0% | |
| TGAAAATACAAGATTCTCCT+TGG | + | chr4.2:36307904-36307923 | MS.gene50962:intron | 30.0% | |
| TTCTCTCAGCAATATGATAA+TGG | + | chr4.2:36306553-36306572 | MS.gene50962:intron | 30.0% | |
| TTTCCAATGCTATGTAATGT+TGG | + | chr4.2:36308264-36308283 | MS.gene50962:intron | 30.0% | |
| TTTCTAGGCAAATATGCATA+TGG | + | chr4.2:36308822-36308841 | MS.gene50962:intron | 30.0% | |
| ! | ACTTTCTTTTTGTCAGTAAC+AGG | - | chr4.2:36310303-36310322 | None:intergenic | 30.0% |
| ! | AGATGATGATGATAATTCGT+TGG | + | chr4.2:36308169-36308188 | MS.gene50962:intron | 30.0% |
| ! | CTTTGGTTCAATAACTGAAT+CGG | - | chr4.2:36310244-36310263 | None:intergenic | 30.0% |
| ! | GATGTTGTCAACTATGATTT+TGG | - | chr4.2:36309120-36309139 | None:intergenic | 30.0% |
| ! | GTATTTGTTGAAGATGTTGT+AGG | + | chr4.2:36308131-36308150 | MS.gene50962:intron | 30.0% |
| ! | TATATTTTTCACCGAACAGT+TGG | + | chr4.2:36307464-36307483 | MS.gene50962:intron | 30.0% |
| ! | TTATCTTTCTTTTTGCTTGG+CGG | - | chr4.2:36310555-36310574 | None:intergenic | 30.0% |
| !! | ACCGCTATTTCATAACTTTT+AGG | - | chr4.2:36308563-36308582 | None:intergenic | 30.0% |
| !! | ACTATGATTTTGGTAAGTTC+TGG | - | chr4.2:36309110-36309129 | None:intergenic | 30.0% |
| !! | ATTTTCAAAGTGCTTGATGA+AGG | + | chr4.2:36305998-36306017 | MS.gene50962:CDS | 30.0% |
| !! | CGTAATGTTTTGAATTTTGG+TGG | + | chr4.2:36308377-36308396 | MS.gene50962:intron | 30.0% |
| !! | TTGTGATTTTGTTTGTATGG+TGG | + | chr4.2:36308885-36308904 | MS.gene50962:intron | 30.0% |
| AAAAGTTGGACCTAACACTA+CGG | - | chr4.2:36307714-36307733 | None:intergenic | 35.0% | |
| ACCAAAGTCTAATTCTGCAA+TGG | + | chr4.2:36310257-36310276 | MS.gene50962:CDS | 35.0% | |
| ACTTGACAGATCTTGCATAT+TGG | - | chr4.2:36309142-36309161 | None:intergenic | 35.0% | |
| AGTTCAAGGGGAAAATTTCT+CGG | + | chr4.2:36309827-36309846 | MS.gene50962:CDS | 35.0% | |
| ATGACTAGCAAAGGAGAATA+CGG | - | chr4.2:36307177-36307196 | None:intergenic | 35.0% | |
| ATGTATAGGAGTTCACAATC+CGG | + | chr4.2:36306338-36306357 | MS.gene50962:intron | 35.0% | |
| ATTTACCATGCATCCTTGAT+TGG | + | chr4.2:36309790-36309809 | MS.gene50962:CDS | 35.0% | |
| ATTTCGGTTACCATTTACTC+GGG | - | chr4.2:36308751-36308770 | None:intergenic | 35.0% | |
| CAAAGTGAAATAATGCAGTG+AGG | + | chr4.2:36307550-36307569 | MS.gene50962:intron | 35.0% | |
| CAATTGAATGAACTCATAGC+AGG | + | chr4.2:36306993-36307012 | MS.gene50962:CDS | 35.0% | |
| CACCATTAGAACGTTAGTAA+AGG | - | chr4.2:36308695-36308714 | None:intergenic | 35.0% | |
| CACTGTCTTTAATACCACTA+AGG | + | chr4.2:36306234-36306253 | MS.gene50962:intron | 35.0% | |
| CGAAGACAGTATAAATACAG+TGG | - | chr4.2:36306402-36306421 | None:intergenic | 35.0% | |
| CTAAGTGATGCAAAATTAGG+TGG | + | chr4.2:36306652-36306671 | MS.gene50962:intron | 35.0% | |
| CTTAGTGGTATTAAAGACAG+TGG | - | chr4.2:36306236-36306255 | None:intergenic | 35.0% | |
| CTTTACTAACGTTCTAATGG+TGG | + | chr4.2:36308693-36308712 | MS.gene50962:intron | 35.0% | |
| GAAAAAGGAGAAAAAGGAAG+AGG | + | chr4.2:36310356-36310375 | MS.gene50962:CDS | 35.0% | |
| GAAGCAAACATGAAATTGAG+AGG | - | chr4.2:36306536-36306555 | None:intergenic | 35.0% | |
| GAAGCTTCAGTGATATCAAT+GGG | + | chr4.2:36309475-36309494 | MS.gene50962:CDS | 35.0% | |
| GACCTTTACTAACGTTCTAA+TGG | + | chr4.2:36308690-36308709 | MS.gene50962:intron | 35.0% | |
| GAGGAGAAAAGAAGAAAAAG+AGG | + | chr4.2:36310493-36310512 | MS.gene50962:CDS | 35.0% | |
| GAGGATGTTCCGAATTATTA+TGG | + | chr4.2:36308191-36308210 | MS.gene50962:intron | 35.0% | |
| TAGATTCTACACTTCCTTAG+TGG | - | chr4.2:36306251-36306270 | None:intergenic | 35.0% | |
| TCCATTGCAGAATTAGACTT+TGG | - | chr4.2:36310261-36310280 | None:intergenic | 35.0% | |
| TCCGAATTATTATGGTGAAG+AGG | + | chr4.2:36308199-36308218 | MS.gene50962:intron | 35.0% | |
| TGAGTAAATTAATTGGCAGC+AGG | - | chr4.2:36309231-36309250 | None:intergenic | 35.0% | |
| TGCTAGTCATCAAAGAAGTT+AGG | + | chr4.2:36307187-36307206 | MS.gene50962:intron | 35.0% | |
| TGGTAAATGAGACCATACTT+TGG | - | chr4.2:36309778-36309797 | None:intergenic | 35.0% | |
| TGTTCACAACAATGCTGTTA+TGG | + | chr4.2:36306947-36306966 | MS.gene50962:CDS | 35.0% | |
| TTCTTAACAACTTCCTCTTC+TGG | - | chr4.2:36310405-36310424 | None:intergenic | 35.0% | |
| TTGTCATATGCTTCGATCTT+GGG | - | chr4.2:36310085-36310104 | None:intergenic | 35.0% | |
| ! | ACTTCTTTGATGACTAGCAA+AGG | - | chr4.2:36307186-36307205 | None:intergenic | 35.0% |
| ! | ATTTCAGATTTTGTCAGAGG+AGG | + | chr4.2:36309435-36309454 | MS.gene50962:intron | 35.0% |
| ! | CACTTTGAAAATAGCAAACC+CGG | - | chr4.2:36305990-36306009 | None:intergenic | 35.0% |
| ! | GAAATTTTCCCCTTGAACTT+TGG | - | chr4.2:36309826-36309845 | None:intergenic | 35.0% |
| ! | TATCCCGCTATAGCATTTTT+GGG | + | chr4.2:36308598-36308617 | MS.gene50962:intron | 35.0% |
| ! | TGATGATGATAATTCGTTGG+AGG | + | chr4.2:36308172-36308191 | MS.gene50962:intron | 35.0% |
| ! | TTCTTTTTGTCAGTAACAGG+AGG | - | chr4.2:36310300-36310319 | None:intergenic | 35.0% |
| !! | AAAGCTTGGGAGTATCATTA+AGG | + | chr4.2:36306820-36306839 | MS.gene50962:CDS | 35.0% |
| !! | AGGAAAGCTTTCTAAAGTTG+AGG | + | chr4.2:36306018-36306037 | MS.gene50962:CDS | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | - | chr4.2:36308639-36308658 | None:intergenic | 35.0% |
| !!! | AACTTTTTTCTTCAGCTAGC+TGG | + | chr4.2:36308932-36308951 | MS.gene50962:intron | 35.0% |
| !!! | TCAAAACCTTCTGGTTTTGA+TGG | - | chr4.2:36307522-36307541 | None:intergenic | 35.0% |
| AAAGAAGAAAAGAGCCGACT+AGG | + | chr4.2:36310575-36310594 | MS.gene50962:CDS | 40.0% | |
| AAAGGAGAAAAAGGAAGAGG+AGG | + | chr4.2:36310359-36310378 | MS.gene50962:CDS | 40.0% | |
| AAAGTTGGACCTAACACTAC+GGG | - | chr4.2:36307713-36307732 | None:intergenic | 40.0% | |
| AAATTGAGAGGATAAGGGTG+TGG | - | chr4.2:36306524-36306543 | None:intergenic | 40.0% | |
| AACCTTGAAGGCAAAGAACT+AGG | + | chr4.2:36310031-36310050 | MS.gene50962:CDS | 40.0% | |
| AAGCATGCTACTCCAAAGTA+TGG | + | chr4.2:36309763-36309782 | MS.gene50962:CDS | 40.0% | |
| AAGGATAGAAAGAAAGGAGC+CGG | + | chr4.2:36310103-36310122 | MS.gene50962:CDS | 40.0% | |
| ACTATGATCGTTCAGGCTAT+TGG | + | chr4.2:36309011-36309030 | MS.gene50962:CDS | 40.0% | |
| AGTCTTCTTTGTATCACAGC+TGG | - | chr4.2:36307685-36307704 | None:intergenic | 40.0% | |
| ATGAGCCTATTGTGAACACA+AGG | + | chr4.2:36308033-36308052 | MS.gene50962:intron | 40.0% | |
| CAAGATCGAAGCATATGACA+AGG | + | chr4.2:36310084-36310103 | MS.gene50962:CDS | 40.0% | |
| CAATTTGACTGCTATGGTTG+GGG | + | chr4.2:36309621-36309640 | MS.gene50962:CDS | 40.0% | |
| CAGTACATAACGCAATTCAC+CGG | - | chr4.2:36306360-36306379 | None:intergenic | 40.0% | |
| CCAACCATAGCAGTCAAATT+GGG | - | chr4.2:36309622-36309641 | None:intergenic | 40.0% | |
| CCAATTTGACTGCTATGGTT+GGG | + | chr4.2:36309620-36309639 | MS.gene50962:CDS | 40.0% | |
| CTAACGTTCTAATGGTGGTA+AGG | + | chr4.2:36308698-36308717 | MS.gene50962:intron | 40.0% | |
| CTTGTCATATGCTTCGATCT+TGG | - | chr4.2:36310086-36310105 | None:intergenic | 40.0% | |
| GAAGAAAAAGAGGAAGAAGC+AGG | + | chr4.2:36310503-36310522 | MS.gene50962:CDS | 40.0% | |
| GCTAAACTTCAGCTTGTATC+TGG | - | chr4.2:36307072-36307091 | None:intergenic | 40.0% | |
| GGAAGCTTCAGTGATATCAA+TGG | + | chr4.2:36309474-36309493 | MS.gene50962:CDS | 40.0% | |
| GTTTATTAAGCTTCCTCCGT+GGG | - | chr4.2:36309671-36309690 | None:intergenic | 40.0% | |
| TATTAGAGAGCTCTGTGATC+AGG | + | chr4.2:36309528-36309547 | MS.gene50962:CDS | 40.0% | |
| TGAGCCTATTGTGAACACAA+GGG | + | chr4.2:36308034-36308053 | MS.gene50962:intron | 40.0% | |
| TGCAAAGCTTGATTTCTCTG+AGG | + | chr4.2:36309184-36309203 | MS.gene50962:CDS | 40.0% | |
| TTCTAATGTGCCCGAGTAAA+TGG | + | chr4.2:36308738-36308757 | MS.gene50962:intron | 40.0% | |
| TTTCTCCTCCATTCGAAGTA+TGG | - | chr4.2:36310482-36310501 | None:intergenic | 40.0% | |
| ! | AATTGAGAGGATAAGGGTGT+GGG | - | chr4.2:36306523-36306542 | None:intergenic | 40.0% |
| ! | AATTGATGGCAAAGCTAGCA+AGG | + | chr4.2:36306739-36306758 | MS.gene50962:CDS | 40.0% |
| ! | ATCAAGTTGCCAATGCAAGT+GGG | + | chr4.2:36308006-36308025 | MS.gene50962:intron | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | + | chr4.2:36308599-36308618 | MS.gene50962:intron | 40.0% |
| ! | ATTGATGGCAAAGCTAGCAA+GGG | + | chr4.2:36306740-36306759 | MS.gene50962:CDS | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | + | chr4.2:36308597-36308616 | MS.gene50962:intron | 40.0% |
| ! | GAACACAAGGGCTAGTATTA+GGG | + | chr4.2:36308046-36308065 | MS.gene50962:intron | 40.0% |
| ! | GATAAGGCATCAAAACCTTC+TGG | - | chr4.2:36307531-36307550 | None:intergenic | 40.0% |
| ! | GCAGCTACTTTGCTAATTGA+TGG | + | chr4.2:36306725-36306744 | MS.gene50962:CDS | 40.0% |
| ! | TGAACACAAGGGCTAGTATT+AGG | + | chr4.2:36308045-36308064 | MS.gene50962:intron | 40.0% |
| !! | ATACTTTGGAGTAGCATGCT+TGG | - | chr4.2:36309764-36309783 | None:intergenic | 40.0% |
| !! | GCAAGATCTGTCAAGTTGAT+GGG | + | chr4.2:36309146-36309165 | MS.gene50962:CDS | 40.0% |
| !! | TGCAAGATCTGTCAAGTTGA+TGG | + | chr4.2:36309145-36309164 | MS.gene50962:CDS | 40.0% |
| !! | TGCTCTAAAAAGCGCTTTCT+CGG | - | chr4.2:36309734-36309753 | None:intergenic | 40.0% |
| AAAACCGCTATGCAGTGTTG+CGG | - | chr4.2:36307855-36307874 | None:intergenic | 45.0% | |
| AAGTTGGACCTAACACTACG+GGG | - | chr4.2:36307712-36307731 | None:intergenic | 45.0% | |
| AATGGGGACCATACTTCGAA+TGG | + | chr4.2:36310471-36310490 | MS.gene50962:CDS | 45.0% | |
| AGACAAACCCAAGCTCATAG+GGG | - | chr4.2:36307039-36307058 | None:intergenic | 45.0% | |
| AGGACTGATAACTCCAGCTA+AGG | + | chr4.2:36310126-36310145 | MS.gene50962:CDS | 45.0% | |
| AGGAGACCATCAAAACCAGA+AGG | + | chr4.2:36307513-36307532 | MS.gene50962:intron | 45.0% | |
| AGGTCTAGCTGTTCAAGACA+TGG | + | chr4.2:36307013-36307032 | MS.gene50962:CDS | 45.0% | |
| ATAAACCTTGCAAAGCAGCC+TGG | + | chr4.2:36309685-36309704 | MS.gene50962:CDS | 45.0% | |
| ATACCATTCACGAACCCTCA+TGG | - | chr4.2:36309075-36309094 | None:intergenic | 45.0% | |
| ATGAGGGTTCGTGAATGGTA+TGG | + | chr4.2:36309074-36309093 | MS.gene50962:CDS | 45.0% | |
| CAAAGACTGCTTTGGCTATC+AGG | + | chr4.2:36309860-36309879 | MS.gene50962:CDS | 45.0% | |
| CCCAACCATAGCAGTCAAAT+TGG | - | chr4.2:36309623-36309642 | None:intergenic | 45.0% | |
| CCCAATTTGACTGCTATGGT+TGG | + | chr4.2:36309619-36309638 | MS.gene50962:CDS | 45.0% | |
| CGACCCCAAAAATGCTATAG+CGG | - | chr4.2:36308605-36308624 | None:intergenic | 45.0% | |
| CTAGCCCTTGTGTTCACAAT+AGG | - | chr4.2:36308041-36308060 | None:intergenic | 45.0% | |
| CTCATTAACCCCACTTGCAT+TGG | - | chr4.2:36308018-36308037 | None:intergenic | 45.0% | |
| GAAATAATGCAGTGAGGGAG+AGG | + | chr4.2:36307556-36307575 | MS.gene50962:intron | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | - | chr4.2:36308604-36308623 | None:intergenic | 45.0% | |
| GACTATATCCCCGTAGTGTT+AGG | + | chr4.2:36307701-36307720 | MS.gene50962:intron | 45.0% | |
| GAGACAAACCCAAGCTCATA+GGG | - | chr4.2:36307040-36307059 | None:intergenic | 45.0% | |
| GCAAGATAACACCATGGGAT+TGG | + | chr4.2:36309903-36309922 | MS.gene50962:CDS | 45.0% | |
| GCTTCTACTGTTCGAAACAC+CGG | + | chr4.2:36305964-36305983 | MS.gene50962:CDS | 45.0% | |
| GGAATCTACTGAAAAGGCAG+AGG | + | chr4.2:36310443-36310462 | MS.gene50962:CDS | 45.0% | |
| GGAGGTTGAAGATGTTGTTG+AGG | + | chr4.2:36310377-36310396 | MS.gene50962:CDS | 45.0% | |
| GGGATTGGAAAACAGAGCTA+AGG | + | chr4.2:36309918-36309937 | MS.gene50962:CDS | 45.0% | |
| GGTGGATACTATGATCGTTC+AGG | + | chr4.2:36309004-36309023 | MS.gene50962:intron | 45.0% | |
| GGTTTATTAAGCTTCCTCCG+TGG | - | chr4.2:36309672-36309691 | None:intergenic | 45.0% | |
| GTGAGAGAACAAATAGGTGC+TGG | + | chr4.2:36307403-36307422 | MS.gene50962:intron | 45.0% | |
| TATCTCATAACGCTACGCCA+TGG | - | chr4.2:36307817-36307836 | None:intergenic | 45.0% | |
| TATTAGGGCAGAACGAGCAA+AGG | + | chr4.2:36308061-36308080 | MS.gene50962:intron | 45.0% | |
| TGAGACAAACCCAAGCTCAT+AGG | - | chr4.2:36307041-36307060 | None:intergenic | 45.0% | |
| TGCACCCAATTTGACTGCTA+TGG | + | chr4.2:36309615-36309634 | MS.gene50962:CDS | 45.0% | |
| TGTTGTTGAGGAACCAGAAG+AGG | + | chr4.2:36310389-36310408 | MS.gene50962:CDS | 45.0% | |
| TTGAAAATAGCAAACCCGGC+CGG | - | chr4.2:36305986-36306005 | None:intergenic | 45.0% | |
| TTTCACCGAACAGTTGGTTG+TGG | + | chr4.2:36307470-36307489 | MS.gene50962:intron | 45.0% | |
| ! | AAAAGGCAGAGGTGCAGAAT+GGG | + | chr4.2:36310454-36310473 | MS.gene50962:CDS | 45.0% |
| ! | ACTTGCTGCAAAGACTGCTT+TGG | + | chr4.2:36309852-36309871 | MS.gene50962:CDS | 45.0% |
| ! | AGCTCTGTTTTCCAATCCCA+TGG | - | chr4.2:36309917-36309936 | None:intergenic | 45.0% |
| ! | GAATACTTCCGAAGCTCTAG+AGG | + | chr4.2:36306703-36306722 | MS.gene50962:CDS | 45.0% |
| ! | GATCAAGTTGCCAATGCAAG+TGG | + | chr4.2:36308005-36308024 | MS.gene50962:intron | 45.0% |
| ! | GATTTTGTCAGAGGAGGTTG+AGG | + | chr4.2:36309441-36309460 | MS.gene50962:intron | 45.0% |
| ! | GTGTTGCTGAGTCAAAGCTT+GGG | + | chr4.2:36306807-36306826 | MS.gene50962:CDS | 45.0% |
| ! | TCAAGTTGCCAATGCAAGTG+GGG | + | chr4.2:36308007-36308026 | MS.gene50962:intron | 45.0% |
| ! | TTTCCCCTTGAACTTTGGAG+CGG | - | chr4.2:36309821-36309840 | None:intergenic | 45.0% |
| !! | AGAGAACAAATAGGTGCTGG+TGG | + | chr4.2:36307406-36307425 | MS.gene50962:intron | 45.0% |
| !! | GCTGTTATGGAGTTGATGAG+AGG | + | chr4.2:36306960-36306979 | MS.gene50962:CDS | 45.0% |
| !!! | CGCTATAGCATTTTTGGGGT+CGG | + | chr4.2:36308603-36308622 | MS.gene50962:intron | 45.0% |
| AAAGAGGAAGAAGCAGGCAG+AGG | + | chr4.2:36310509-36310528 | MS.gene50962:CDS | 50.0% | |
| AGAATCTGCACGGTACTACC+AGG | - | chr4.2:36309706-36309725 | None:intergenic | 50.0% | |
| AGCTGAACACGTATGCCATG+AGG | + | chr4.2:36309057-36309076 | MS.gene50962:CDS | 50.0% | |
| AGCTGGAGTTATCAGTCCTC+CGG | - | chr4.2:36310125-36310144 | None:intergenic | 50.0% | |
| ATGCCATGAGGGTTCGTGAA+TGG | + | chr4.2:36309069-36309088 | MS.gene50962:CDS | 50.0% | |
| CACTGCAGATGCTGCTAGAA+AGG | + | chr4.2:36306480-36306499 | MS.gene50962:CDS | 50.0% | |
| CCTGACCAATCAAGGATGCA+TGG | - | chr4.2:36309798-36309817 | None:intergenic | 50.0% | |
| CGCCATGGCTTATTGCATAG+CGG | - | chr4.2:36307802-36307821 | None:intergenic | 50.0% | |
| CTTTAGCAGAACCGGCAAAG+CGG | - | chr4.2:36310057-36310076 | None:intergenic | 50.0% | |
| GAAATAGCGGTCATAGCGCT+AGG | + | chr4.2:36308572-36308591 | MS.gene50962:intron | 50.0% | |
| GACCGCTATGCAATAAGCCA+TGG | + | chr4.2:36307797-36307816 | MS.gene50962:intron | 50.0% | |
| GACGGGCAAGATAACACCAT+GGG | + | chr4.2:36309898-36309917 | MS.gene50962:CDS | 50.0% | |
| GAGGGAGAGGAGAATAGAGA+GGG | + | chr4.2:36307569-36307588 | MS.gene50962:intron | 50.0% | |
| GATAGAAAGAAAGGAGCCGG+AGG | + | chr4.2:36310106-36310125 | MS.gene50962:CDS | 50.0% | |
| GCACGTTTGAGGAACCTTGA+AGG | + | chr4.2:36310019-36310038 | MS.gene50962:CDS | 50.0% | |
| GCTATCAGGTGTGATGCACT+GGG | + | chr4.2:36309874-36309893 | MS.gene50962:CDS | 50.0% | |
| GCTGAACACGTATGCCATGA+GGG | + | chr4.2:36309058-36309077 | MS.gene50962:CDS | 50.0% | |
| GGCGTAGCGTTATGAGATAG+CGG | + | chr4.2:36307818-36307837 | MS.gene50962:intron | 50.0% | |
| GGGTTCGTGAATGGTATGGT+TGG | + | chr4.2:36309078-36309097 | MS.gene50962:CDS | 50.0% | |
| GGTAGTACCGTGCAGATTCT+TGG | + | chr4.2:36309706-36309725 | MS.gene50962:CDS | 50.0% | |
| GTGTAATAGCGGCGCTATAG+CGG | + | chr4.2:36307741-36307760 | MS.gene50962:intron | 50.0% | |
| TGAGGGAGAGGAGAATAGAG+AGG | + | chr4.2:36307568-36307587 | MS.gene50962:intron | 50.0% | |
| TGCAGCTTGAAGCACGTTTG+AGG | + | chr4.2:36310008-36310027 | MS.gene50962:intron | 50.0% | |
| TGGCTTATTGCATAGCGGTC+CGG | - | chr4.2:36307797-36307816 | None:intergenic | 50.0% | |
| TTGTCAGTAACAGGAGGCTC+TGG | - | chr4.2:36310294-36310313 | None:intergenic | 50.0% | |
| ! | AAAGAACTAGGCCGCTTTGC+CGG | + | chr4.2:36310043-36310062 | MS.gene50962:CDS | 50.0% |
| ! | AAAGGCAGAGGTGCAGAATG+GGG | + | chr4.2:36310455-36310474 | MS.gene50962:CDS | 50.0% |
| ! | ATGAGATAGCGGCGCAATAG+CGG | + | chr4.2:36307829-36307848 | MS.gene50962:intron | 50.0% |
| ! | CCATGCATCCTTGATTGGTC+AGG | + | chr4.2:36309795-36309814 | MS.gene50962:CDS | 50.0% |
| ! | CGGTGCAGGAGTATGAGTTT+AGG | + | chr4.2:36307493-36307512 | MS.gene50962:intron | 50.0% |
| ! | CTTTCTAGCAGCATCTGCAG+TGG | - | chr4.2:36306482-36306501 | None:intergenic | 50.0% |
| ! | GAAAAGGCAGAGGTGCAGAA+TGG | + | chr4.2:36310453-36310472 | MS.gene50962:CDS | 50.0% |
| ! | GGCCTAGTTCTTTGCCTTCA+AGG | - | chr4.2:36310036-36310055 | None:intergenic | 50.0% |
| ! | TACTACCAGGCTGCTTTGCA+AGG | - | chr4.2:36309693-36309712 | None:intergenic | 50.0% |
| ! | TGACGGGCAAGATAACACCA+TGG | + | chr4.2:36309897-36309916 | MS.gene50962:CDS | 50.0% |
| !! | AATAGGTGCTGGTGGAGCTT+TGG | + | chr4.2:36307414-36307433 | MS.gene50962:intron | 50.0% |
| !! | AGTAGCTGCCTCTAGAGCTT+CGG | - | chr4.2:36306714-36306733 | None:intergenic | 50.0% |
| !! | GCTGAAGTTTAGCGCTGACA+AGG | + | chr4.2:36307079-36307098 | MS.gene50962:CDS | 50.0% |
| !! | GCTTTGCCGGTTCTGCTAAA+GGG | + | chr4.2:36310056-36310075 | MS.gene50962:CDS | 50.0% |
| !! | GGTGTTGCTGAGTCAAAGCT+TGG | + | chr4.2:36306806-36306825 | MS.gene50962:CDS | 50.0% |
| AGACATGGCCCCTATGAGCT+TGG | + | chr4.2:36307028-36307047 | MS.gene50962:CDS | 55.0% | |
| AGGCCGCTCCAAAGTTCAAG+GGG | + | chr4.2:36309815-36309834 | MS.gene50962:CDS | 55.0% | |
| AGGTGTGATGCACTGGGTGA+CGG | + | chr4.2:36309880-36309899 | MS.gene50962:CDS | 55.0% | |
| CACCGAACAGTTGGTTGTGG+CGG | + | chr4.2:36307473-36307492 | MS.gene50962:intron | 55.0% | |
| CACCGCCACAACCAACTGTT+CGG | - | chr4.2:36307478-36307497 | None:intergenic | 55.0% | |
| CAGGCCGCTCCAAAGTTCAA+GGG | + | chr4.2:36309814-36309833 | MS.gene50962:CDS | 55.0% | |
| CGGGCACATTAGAAAGCAGC+TGG | - | chr4.2:36308732-36308751 | None:intergenic | 55.0% | |
| CTACTGTTCGAAACACCGGC+CGG | + | chr4.2:36305968-36305987 | MS.gene50962:CDS | 55.0% | |
| CTCGGCACCAAGAATCTGCA+CGG | - | chr4.2:36309716-36309735 | None:intergenic | 55.0% | |
| GACATGGCCCCTATGAGCTT+GGG | + | chr4.2:36307029-36307048 | MS.gene50962:CDS | 55.0% | |
| GCTATGGTTGGGGAGCTTGT+TGG | + | chr4.2:36309631-36309650 | MS.gene50962:CDS | 55.0% | |
| GGCTATCAGGTGTGATGCAC+TGG | + | chr4.2:36309873-36309892 | MS.gene50962:CDS | 55.0% | |
| GGGCTTCCCTTTAGCAGAAC+CGG | - | chr4.2:36310065-36310084 | None:intergenic | 55.0% | |
| GGGGACCATACTTCGAATGG+AGG | + | chr4.2:36310474-36310493 | MS.gene50962:CDS | 55.0% | |
| TACTGTTCGAAACACCGGCC+GGG | + | chr4.2:36305969-36305988 | MS.gene50962:CDS | 55.0% | |
| TCAGGCCGCTCCAAAGTTCA+AGG | + | chr4.2:36309813-36309832 | MS.gene50962:CDS | 55.0% | |
| !! | CGCTTTGCCGGTTCTGCTAA+AGG | + | chr4.2:36310055-36310074 | MS.gene50962:CDS | 55.0% |
| ACAGTTGGTTGTGGCGGTGC+AGG | + | chr4.2:36307479-36307498 | MS.gene50962:intron | 60.0% | |
| AGCTTCCTCCGTGGGCAATG+AGG | - | chr4.2:36309663-36309682 | None:intergenic | 60.0% | |
| GAGGAAGAAGCAGGCAGAGG+AGG | + | chr4.2:36310512-36310531 | MS.gene50962:CDS | 60.0% | |
| GGAGGTTGAGGCAGAGGTGA+AGG | + | chr4.2:36309453-36309472 | MS.gene50962:CDS | 60.0% | |
| GGCGCTATAGCGGCCAATAG+CGG | + | chr4.2:36307751-36307770 | MS.gene50962:intron | 60.0% | |
| GGTGTGATGCACTGGGTGAC+GGG | + | chr4.2:36309881-36309900 | MS.gene50962:CDS | 60.0% | |
| GTCAGAGGAGGTTGAGGCAG+AGG | + | chr4.2:36309447-36309466 | MS.gene50962:CDS | 60.0% | |
| TGGAGCGGCCTGACCAATCA+AGG | - | chr4.2:36309806-36309825 | None:intergenic | 60.0% | |
| GCGGCCGCAACACTGCATAG+CGG | + | chr4.2:36307848-36307867 | MS.gene50962:intron | 65.0% | |
| GGTGCTCGCCTCATTGCCCA+CGG | + | chr4.2:36309652-36309671 | MS.gene50962:CDS | 65.0% | |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | - | chr4.2:36308629-36308648 | None:intergenic | 65.0% |
| GCTCGCCTCATTGCCCACGG+AGG | + | chr4.2:36309655-36309674 | MS.gene50962:CDS | 70.0% | |
| AGCGGCCAATAGCGGCCGCG+CGG | + | chr4.2:36307759-36307778 | MS.gene50962:intron | 75.0% | |
| CCAATAGCGGCCGCGCGGTG+CGG | + | chr4.2:36307764-36307783 | MS.gene50962:intron | 75.0% | |
| ! | CCGCACCGCGCGGCCGCTAT+TGG | - | chr4.2:36307767-36307786 | None:intergenic | 80.0% |
| ! | CGCGCGGTGCGGTGCGGTAC+CGG | + | chr4.2:36307775-36307794 | MS.gene50962:intron | 80.0% |
| ! | CGGTACCGCACCGCACCGCG+CGG | - | chr4.2:36307777-36307796 | None:intergenic | 80.0% |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | + | chr4.2:36307769-36307788 | MS.gene50962:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 36305954 | 36310596 | 36305954 | ID=MS.gene50962 |
| chr4.2 | mRNA | 36305954 | 36310596 | 36305954 | ID=MS.gene50962.t1;Parent=MS.gene50962 |
| chr4.2 | exon | 36305954 | 36306039 | 36305954 | ID=MS.gene50962.t1.exon1;Parent=MS.gene50962.t1 |
| chr4.2 | CDS | 36305954 | 36306039 | 36305954 | ID=cds.MS.gene50962.t1;Parent=MS.gene50962.t1 |
| chr4.2 | exon | 36306460 | 36306501 | 36306460 | ID=MS.gene50962.t1.exon2;Parent=MS.gene50962.t1 |
| chr4.2 | CDS | 36306460 | 36306501 | 36306460 | ID=cds.MS.gene50962.t1;Parent=MS.gene50962.t1 |
| chr4.2 | exon | 36306671 | 36306850 | 36306671 | ID=MS.gene50962.t1.exon3;Parent=MS.gene50962.t1 |
| chr4.2 | CDS | 36306671 | 36306850 | 36306671 | ID=cds.MS.gene50962.t1;Parent=MS.gene50962.t1 |
| chr4.2 | exon | 36306936 | 36307100 | 36306936 | ID=MS.gene50962.t1.exon4;Parent=MS.gene50962.t1 |
| chr4.2 | CDS | 36306936 | 36307100 | 36306936 | ID=cds.MS.gene50962.t1;Parent=MS.gene50962.t1 |
| chr4.2 | exon | 36309005 | 36309205 | 36309005 | ID=MS.gene50962.t1.exon5;Parent=MS.gene50962.t1 |
| chr4.2 | CDS | 36309005 | 36309205 | 36309005 | ID=cds.MS.gene50962.t1;Parent=MS.gene50962.t1 |
| chr4.2 | exon | 36309442 | 36309939 | 36309442 | ID=MS.gene50962.t1.exon6;Parent=MS.gene50962.t1 |
| chr4.2 | CDS | 36309442 | 36309939 | 36309442 | ID=cds.MS.gene50962.t1;Parent=MS.gene50962.t1 |
| chr4.2 | exon | 36310013 | 36310147 | 36310013 | ID=MS.gene50962.t1.exon7;Parent=MS.gene50962.t1 |
| chr4.2 | CDS | 36310013 | 36310147 | 36310013 | ID=cds.MS.gene50962.t1;Parent=MS.gene50962.t1 |
| chr4.2 | exon | 36310225 | 36310596 | 36310225 | ID=MS.gene50962.t1.exon8;Parent=MS.gene50962.t1 |
| chr4.2 | CDS | 36310225 | 36310596 | 36310225 | ID=cds.MS.gene50962.t1;Parent=MS.gene50962.t1 |
| Gene Sequence |
| Protein sequence |
