Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51267.t1 | BBH05442.1 | 67.1 | 468 | 61 | 3 | 1 | 375 | 1 | 468 | 1.40E-147 | 533.1 |
| MS.gene51267.t1 | BBH05442.1 | 50.8 | 120 | 51 | 2 | 367 | 482 | 710 | 825 | 3.10E-17 | 100.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51267.t1 | P10978 | 26.7 | 475 | 235 | 10 | 7 | 375 | 5 | 472 | 3.8e-40 | 167.5 |
| MS.gene51267.t1 | P10978 | 48.1 | 54 | 28 | 0 | 456 | 509 | 1272 | 1325 | 5.5e-07 | 57.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51267.t1 | A0A4Y1RM46 | 67.1 | 468 | 61 | 3 | 1 | 375 | 1 | 468 | 1.0e-147 | 533.1 |
| MS.gene51267.t1 | A0A4Y1RM46 | 50.8 | 120 | 51 | 2 | 367 | 482 | 710 | 825 | 2.2e-17 | 100.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052735 | MS.gene51267 | 0.831368 | 1.74E-55 | -1.69E-46 |
| MS.gene052736 | MS.gene51267 | 0.832383 | 9.75E-56 | -1.69E-46 |
| MS.gene058292 | MS.gene51267 | 0.813168 | 2.93E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51267.t1 | MTR_2g039140 | 40.217 | 184 | 77 | 2 | 1 | 183 | 120 | 271 | 2.16e-31 | 122 |
| MS.gene51267.t1 | MTR_4g036430 | 89.744 | 39 | 4 | 0 | 1 | 39 | 31 | 69 | 3.07e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51267.t1 | AT3G29785 | 57.778 | 90 | 37 | 1 | 11 | 100 | 7 | 95 | 1.21e-29 | 112 |
Find 114 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATACCAACTGAACTTAAT+TGG | 0.122345 | 6.3:-77048112 | None:intergenic |
| CTGAGAACTACGATGATTTC+TGG | 0.189947 | 6.3:-77048396 | None:intergenic |
| ATCTCATCTGTGGGACTTCC+TGG | 0.243179 | 6.3:-77049898 | None:intergenic |
| TCATCATCCTTCATCGATTC+TGG | 0.247368 | 6.3:-77047852 | None:intergenic |
| CTAGAAGACCTTCTTAATTC+AGG | 0.247761 | 6.3:-77049994 | None:intergenic |
| TTCGCCTCTTGATTCTTTGC+TGG | 0.253882 | 6.3:-77048485 | None:intergenic |
| CTCTGGTCTCTTATTCTAAC+AGG | 0.293382 | 6.3:-77051614 | None:intergenic |
| ACTACGATGATTTCTGGATT+TGG | 0.314338 | 6.3:-77048390 | None:intergenic |
| TTCTGCCAATTCCTCTGATT+GGG | 0.327914 | 6.3:-77049923 | None:intergenic |
| ATTTCTGGATTTGGATTGTC+TGG | 0.336440 | 6.3:-77048381 | None:intergenic |
| ATTCTGCCAATTCCTCTGAT+TGG | 0.336830 | 6.3:-77049924 | None:intergenic |
| GATACCAACTGAACTTAATT+GGG | 0.373662 | 6.3:-77048111 | None:intergenic |
| TCGCCTCTTGATTCTTTGCT+GGG | 0.374564 | 6.3:-77048484 | None:intergenic |
| ATGGTGCGGACTTTGGCTTT+TGG | 0.377376 | 6.3:+77047766 | MS.gene51267:CDS |
| CAAATGAAAATCCTAATCTA+TGG | 0.386419 | 6.3:+77048945 | MS.gene51267:CDS |
| AATCTCTTGTGCCATAGATT+AGG | 0.388549 | 6.3:-77048956 | None:intergenic |
| CATGCTTCATCATAATCTTC+AGG | 0.392057 | 6.3:-77050075 | None:intergenic |
| GTAGAGATGGATGATGTTCC+AGG | 0.394130 | 6.3:+77049880 | MS.gene51267:CDS |
| GATTCCCCAATCAGAGGAAT+TGG | 0.403290 | 6.3:+77049918 | MS.gene51267:CDS |
| GACCTTCTTAATTCAGGAAC+TGG | 0.408428 | 6.3:-77049988 | None:intergenic |
| ACAGTAGCACTCCAACTATC+TGG | 0.413891 | 6.3:-77048179 | None:intergenic |
| TCATCCATCTCTACATAAAC+AGG | 0.414467 | 6.3:-77049871 | None:intergenic |
| AGAAATTCAACCAGAGGAAA+TGG | 0.417568 | 6.3:+77048341 | MS.gene51267:CDS |
| TGTCTTCCCTACCAGATAGT+TGG | 0.424640 | 6.3:+77048168 | MS.gene51267:CDS |
| TAGTTTATGTATCTGCTGTT+TGG | 0.431465 | 6.3:-77050027 | None:intergenic |
| TGTAGCCTTCGTCAGCCAAC+TGG | 0.439978 | 6.3:-77048802 | None:intergenic |
| GAGATCCGACGGAGAGAGTT+GGG | 0.442215 | 6.3:+77048275 | MS.gene51267:CDS |
| GCAAATGTTGCTTCCACCTC+AGG | 0.445655 | 6.3:+77048515 | MS.gene51267:CDS |
| CAGTCTTCCACGGTGATGAC+TGG | 0.446820 | 6.3:+77048828 | MS.gene51267:CDS |
| AAGTTCGATGGTGCGGACTT+TGG | 0.452497 | 6.3:+77047759 | MS.gene51267:CDS |
| CAGATCTCTTCTTGAGGATG+AGG | 0.452949 | 6.3:+77051491 | MS.gene51267:CDS |
| AATCTATGGCACAAGAGATT+AGG | 0.468903 | 6.3:+77048959 | MS.gene51267:CDS |
| TTAGGCCATATGAGTGAAAA+GGG | 0.472747 | 6.3:+77048977 | MS.gene51267:CDS |
| TGAACTTTATTTGATGCTGA+AGG | 0.474628 | 6.3:-77048005 | None:intergenic |
| ATTTGATGATGTTCGTGATC+TGG | 0.482957 | 6.3:+77048241 | MS.gene51267:CDS |
| AAGGAAAACTACCAAGTCTT+CGG | 0.487272 | 6.3:+77049020 | MS.gene51267:CDS |
| TTTACCACGTCCATTTCCTC+TGG | 0.487326 | 6.3:-77048351 | None:intergenic |
| ACCTTTGTTAACATATCTGC+GGG | 0.491781 | 6.3:-77051549 | None:intergenic |
| TTGTTGCAACTGCAATCAAA+TGG | 0.491822 | 6.3:-77048925 | None:intergenic |
| ATTAGGCCATATGAGTGAAA+AGG | 0.493480 | 6.3:+77048976 | MS.gene51267:CDS |
| CTTAATTCAGGAACTGGAGT+AGG | 0.496648 | 6.3:-77049982 | None:intergenic |
| ATGAAGGTTATGCACTCAAA+AGG | 0.501665 | 6.3:+77049001 | MS.gene51267:CDS |
| CTAACATTGATCAAAATTCA+AGG | 0.505718 | 6.3:+77051516 | MS.gene51267:CDS |
| ATATGTGAAGACTGTATACT+TGG | 0.507653 | 6.3:+77049058 | MS.gene51267:CDS |
| TCTATCGAGTGTTGGAATTG+TGG | 0.512167 | 6.3:+77048428 | MS.gene51267:CDS |
| AACTACATGTTGTTAACTGA+TGG | 0.513907 | 6.3:+77050045 | MS.gene51267:CDS |
| CGCGTCACCTCCTCCTGAGG+TGG | 0.515832 | 6.3:-77048528 | None:intergenic |
| ACTCTTTCTACCGCGAGCTA+TGG | 0.525718 | 6.3:-77048873 | None:intergenic |
| CACAGCTGTGAGTAGCTCCT+CGG | 0.527844 | 6.3:+77048202 | MS.gene51267:CDS |
| CTCCAGTTCCTGAATTAAGA+AGG | 0.530952 | 6.3:+77049986 | MS.gene51267:CDS |
| ATTTCTATTGACCGAAGACT+TGG | 0.531290 | 6.3:-77049031 | None:intergenic |
| TATGAGTGAAAAGGGGATGA+AGG | 0.531430 | 6.3:+77048985 | MS.gene51267:CDS |
| GATGACTGGAAGATTTCAAA+AGG | 0.532022 | 6.3:+77048842 | MS.gene51267:CDS |
| ACAGCTGTGAGTAGCTCCTC+GGG | 0.532462 | 6.3:+77048203 | MS.gene51267:CDS |
| CTTAATCTCCGTAGGCCAGT+TGG | 0.533019 | 6.3:+77048787 | MS.gene51267:intron |
| AAAGAAACCAGAATCGATGA+AGG | 0.539324 | 6.3:+77047845 | MS.gene51267:CDS |
| TGTTGGAATTGTGGAAAGAC+GGG | 0.540082 | 6.3:+77048437 | MS.gene51267:CDS |
| GATTGGGGAATCTCATCTGT+GGG | 0.541163 | 6.3:-77049907 | None:intergenic |
| TGATTGGGGAATCTCATCTG+TGG | 0.543207 | 6.3:-77049908 | None:intergenic |
| CGCAGATATGTTAACAAAGG+TGG | 0.548479 | 6.3:+77051551 | MS.gene51267:CDS |
| AGAGATCCGACGGAGAGAGT+TGG | 0.549236 | 6.3:+77048274 | MS.gene51267:CDS |
| GGTACTCTTTACAAGACAGC+TGG | 0.550162 | 6.3:+77048896 | MS.gene51267:CDS |
| CAAATAAAGTTCATTTGATG+AGG | 0.550433 | 6.3:+77048015 | MS.gene51267:CDS |
| GGAACTGGAGTAGGATGCAC+TGG | 0.552002 | 6.3:-77049973 | None:intergenic |
| AACCACCGCTGGTCTTATGA+AGG | 0.557775 | 6.3:+77047959 | MS.gene51267:CDS |
| TAGCACTCCAACTATCTGGT+AGG | 0.558134 | 6.3:-77048175 | None:intergenic |
| ACTCGAAATCTATCGAGTGT+TGG | 0.561027 | 6.3:+77048420 | MS.gene51267:CDS |
| GTGAAAATTGAAAAGTTCGA+TGG | 0.563926 | 6.3:+77047747 | MS.gene51267:CDS |
| GTGTTGGAATTGTGGAAAGA+CGG | 0.567490 | 6.3:+77048436 | MS.gene51267:CDS |
| CTCTGTATGCAATACTGAAG+AGG | 0.567853 | 6.3:-77048309 | None:intergenic |
| ACAACCCAATTAAGTTCAGT+TGG | 0.568124 | 6.3:+77048107 | MS.gene51267:CDS |
| AAGTTGTGCTCAACTTCAGT+TGG | 0.568559 | 6.3:+77051591 | MS.gene51267:CDS |
| GTTGCTTCCACCTCAGGAGG+AGG | 0.568689 | 6.3:+77048521 | MS.gene51267:CDS |
| TCTGCCAATTCCTCTGATTG+GGG | 0.571085 | 6.3:-77049922 | None:intergenic |
| CTTCATCAGATCTCTTCTTG+AGG | 0.574417 | 6.3:+77051485 | MS.gene51267:CDS |
| TTTACACTTCGGATGACAGA+AGG | 0.576141 | 6.3:+77048044 | MS.gene51267:CDS |
| CTCCCACTTACTAGCATCCG+TGG | 0.588137 | 6.3:-77050103 | None:intergenic |
| GATGACAGAAGGCGCATCAG+TGG | 0.593273 | 6.3:+77048055 | MS.gene51267:CDS |
| CACCTTTGTTAACATATCTG+CGG | 0.595625 | 6.3:-77051550 | None:intergenic |
| AAATGGACGTGGTAAATCAA+AGG | 0.596335 | 6.3:+77048358 | MS.gene51267:CDS |
| AGCACTCCAACTATCTGGTA+GGG | 0.597976 | 6.3:-77048174 | None:intergenic |
| TGAGGCGGTTGTTTACACTT+CGG | 0.598027 | 6.3:+77048033 | MS.gene51267:CDS |
| ATAAAGTTCATTTGATGAGG+CGG | 0.598437 | 6.3:+77048018 | MS.gene51267:CDS |
| CTTCTCGATAGACAAGCACT+TGG | 0.601850 | 6.3:+77047882 | MS.gene51267:CDS |
| CGAGCCTGTTTATGTAGAGA+TGG | 0.602356 | 6.3:+77049867 | MS.gene51267:CDS |
| AATGTTGCTTCCACCTCAGG+AGG | 0.603928 | 6.3:+77048518 | MS.gene51267:CDS |
| AATCGATGAAGGATGATGAG+TGG | 0.606445 | 6.3:+77047856 | MS.gene51267:CDS |
| AATTGAAAAGTTCGATGGTG+CGG | 0.608192 | 6.3:+77047752 | MS.gene51267:CDS |
| GGCTACACAACAGTCTTCCA+CGG | 0.609498 | 6.3:+77048818 | MS.gene51267:CDS |
| CAAGTGCTTGTCTATCGAGA+AGG | 0.612004 | 6.3:-77047881 | None:intergenic |
| TATGGCTGCAGACGAAGGAA+AGG | 0.614378 | 6.3:+77047725 | None:intergenic |
| TACATGTTGTTAACTGATGG+AGG | 0.616383 | 6.3:+77050048 | MS.gene51267:CDS |
| GGAGTTATGGCTGCAGACGA+AGG | 0.617375 | 6.3:+77047720 | None:intergenic |
| ATTCACCCAACTCTCTCCGT+CGG | 0.618585 | 6.3:-77048280 | None:intergenic |
| AGCCTTCATAAGACCAGCGG+TGG | 0.620835 | 6.3:-77047961 | None:intergenic |
| GAATCAAGAGGCGAAAGATG+AGG | 0.623736 | 6.3:+77048493 | MS.gene51267:CDS |
| GCAAAAGAGAAAACCACCGC+TGG | 0.626545 | 6.3:+77047948 | MS.gene51267:CDS |
| AGATGAGATTCCCCAATCAG+AGG | 0.627217 | 6.3:+77049912 | MS.gene51267:CDS |
| TGGTATCAAATTTGACGATG+AGG | 0.628760 | 6.3:+77048127 | MS.gene51267:CDS |
| TACTCAGTGAAGAGATCCGA+CGG | 0.629113 | 6.3:+77048264 | MS.gene51267:CDS |
| CAACGCGTCACCTCCTCCTG+AGG | 0.630580 | 6.3:-77048531 | None:intergenic |
| AGAGGAAGAAATTCAACCAG+AGG | 0.643795 | 6.3:+77048335 | MS.gene51267:CDS |
| ATAGCTCGCGGTAGAAAGAG+TGG | 0.650828 | 6.3:+77048875 | MS.gene51267:CDS |
| GTAGGCCAGTTGGCTGACGA+AGG | 0.651906 | 6.3:+77048797 | MS.gene51267:intron |
| TCCCGCAGATATGTTAACAA+AGG | 0.657588 | 6.3:+77051548 | MS.gene51267:CDS |
| TCAACCAGAGGAAATGGACG+TGG | 0.665050 | 6.3:+77048347 | MS.gene51267:CDS |
| GCTCCCAGCAAAGAATCAAG+AGG | 0.671318 | 6.3:+77048481 | MS.gene51267:CDS |
| GGATGCACTGGTGTGTCAGA+CGG | 0.673844 | 6.3:-77049961 | None:intergenic |
| GTATTGCATACAGAGTCAAG+AGG | 0.682691 | 6.3:+77048317 | MS.gene51267:CDS |
| TAGGCCATATGAGTGAAAAG+GGG | 0.691407 | 6.3:+77048978 | MS.gene51267:CDS |
| TGATGAAGCATGTCAGACCA+CGG | 0.691661 | 6.3:+77050086 | MS.gene51267:CDS |
| AAGAGCCTTCATAAGACCAG+CGG | 0.707222 | 6.3:-77047964 | None:intergenic |
| GGTGCAATGACCATAGCTCG+CGG | 0.728572 | 6.3:+77048863 | MS.gene51267:CDS |
| AAATCTTCCAGTCATCACCG+TGG | 0.733529 | 6.3:-77048835 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTAAGATTAAGTTGAAT+GGG | + | chr6.3:77048714-77048733 | MS.gene51267:intron | 20.0% |
| ! | AATTCTTGAAGAATTCTTTC+TGG | - | chr6.3:77048625-77048644 | None:intergenic | 25.0% |
| ! | ACTGGTTATATATTTACTGT+TGG | + | chr6.3:77051218-77051237 | MS.gene51267:intron | 25.0% |
| ! | ATAGCAAAACTTCTTGAATT+TGG | - | chr6.3:77049371-77049390 | None:intergenic | 25.0% |
| ! | ATTCTTGAAGAATTCTTTCT+GGG | - | chr6.3:77048624-77048643 | None:intergenic | 25.0% |
| ! | CAAATAAAGTTCATTTGATG+AGG | + | chr6.3:77048015-77048034 | MS.gene51267:CDS | 25.0% |
| ! | CAAATGAAAATCCTAATCTA+TGG | + | chr6.3:77048945-77048964 | MS.gene51267:CDS | 25.0% |
| ! | CTAACATTGATCAAAATTCA+AGG | + | chr6.3:77051516-77051535 | MS.gene51267:CDS | 25.0% |
| ! | TATATATTTACTGTTGGTAC+TGG | + | chr6.3:77051224-77051243 | MS.gene51267:intron | 25.0% |
| !!! | GAAGTTAAGATTAAGTTGAA+TGG | + | chr6.3:77048713-77048732 | MS.gene51267:intron | 25.0% |
| AAAGAATTGATATGGCTTCA+AGG | + | chr6.3:77051332-77051351 | MS.gene51267:intron | 30.0% | |
| AAATGTTTGTACTTCAGCAA+AGG | + | chr6.3:77051128-77051147 | MS.gene51267:intron | 30.0% | |
| AACTACATGTTGTTAACTGA+TGG | + | chr6.3:77050045-77050064 | MS.gene51267:CDS | 30.0% | |
| AAGCTAGCAAAGAATTGATA+TGG | + | chr6.3:77051324-77051343 | MS.gene51267:intron | 30.0% | |
| AGAAAAAGGGAAAGAGAATA+TGG | + | chr6.3:77050476-77050495 | MS.gene51267:intron | 30.0% | |
| ATAAAATACCAGAAGAGGTA+TGG | + | chr6.3:77049587-77049606 | MS.gene51267:intron | 30.0% | |
| ATAAAGTTCATTTGATGAGG+CGG | + | chr6.3:77048018-77048037 | MS.gene51267:CDS | 30.0% | |
| ATATGTGAAGACTGTATACT+TGG | + | chr6.3:77049058-77049077 | MS.gene51267:CDS | 30.0% | |
| GATACCAACTGAACTTAATT+GGG | - | chr6.3:77048114-77048133 | None:intergenic | 30.0% | |
| GGATGATGAAAACAAAAAGA+TGG | + | chr6.3:77049762-77049781 | MS.gene51267:intron | 30.0% | |
| GTGAAAATTGAAAAGTTCGA+TGG | + | chr6.3:77047747-77047766 | MS.gene51267:CDS | 30.0% | |
| TACAAGATTGTTCATTTCCA+AGG | - | chr6.3:77048676-77048695 | None:intergenic | 30.0% | |
| TAGTTTATGTATCTGCTGTT+TGG | - | chr6.3:77050030-77050049 | None:intergenic | 30.0% | |
| TATAACCAGTTGTACTTCTT+CGG | - | chr6.3:77051208-77051227 | None:intergenic | 30.0% | |
| TATGTGCATATTAGTGATCA+AGG | + | chr6.3:77049661-77049680 | MS.gene51267:intron | 30.0% | |
| TGATACCAACTGAACTTAAT+TGG | - | chr6.3:77048115-77048134 | None:intergenic | 30.0% | |
| TGGAAATGAACAATCTTGTA+AGG | + | chr6.3:77048676-77048695 | MS.gene51267:intron | 30.0% | |
| ! | GTTTTGCAAAGATTCAACAT+GGG | + | chr6.3:77050843-77050862 | MS.gene51267:intron | 30.0% |
| ! | TATTTGAAGCTTTCAAGAGA+TGG | + | chr6.3:77049269-77049288 | MS.gene51267:intron | 30.0% |
| ! | TGAACTTTATTTGATGCTGA+AGG | - | chr6.3:77048008-77048027 | None:intergenic | 30.0% |
| ! | TGTTTTGCAAAGATTCAACA+TGG | + | chr6.3:77050842-77050861 | MS.gene51267:intron | 30.0% |
| AAAAAGCTTAGAACCGACAA+TGG | + | chr6.3:77049328-77049347 | MS.gene51267:intron | 35.0% | |
| AAAGAAACCAGAATCGATGA+AGG | + | chr6.3:77047845-77047864 | MS.gene51267:CDS | 35.0% | |
| AAAGAGTGATGTACAAAGAC+AGG | + | chr6.3:77049812-77049831 | MS.gene51267:intron | 35.0% | |
| AAAGTGCACTTCTTGGATTT+GGG | - | chr6.3:77049703-77049722 | None:intergenic | 35.0% | |
| AAATCCAGGTAAAGCTCATT+GGG | + | chr6.3:77051061-77051080 | MS.gene51267:intron | 35.0% | |
| AAATGGACGTGGTAAATCAA+AGG | + | chr6.3:77048358-77048377 | MS.gene51267:CDS | 35.0% | |
| AACCTTGGTAAAGTTTACCT+TGG | + | chr6.3:77048656-77048675 | MS.gene51267:intron | 35.0% | |
| AAGGAAAACTACCAAGTCTT+CGG | + | chr6.3:77049020-77049039 | MS.gene51267:CDS | 35.0% | |
| AATCTATGGCACAAGAGATT+AGG | + | chr6.3:77048959-77048978 | MS.gene51267:CDS | 35.0% | |
| AATCTCTTGTGCCATAGATT+AGG | - | chr6.3:77048959-77048978 | None:intergenic | 35.0% | |
| AATTGAAAAGTTCGATGGTG+CGG | + | chr6.3:77047752-77047771 | MS.gene51267:CDS | 35.0% | |
| ACAACCCAATTAAGTTCAGT+TGG | + | chr6.3:77048107-77048126 | MS.gene51267:CDS | 35.0% | |
| ACCTTTGTTAACATATCTGC+GGG | - | chr6.3:77051552-77051571 | None:intergenic | 35.0% | |
| AGAAATTCAACCAGAGGAAA+TGG | + | chr6.3:77048341-77048360 | MS.gene51267:CDS | 35.0% | |
| AGACTTCATTTCGTCTTTCA+TGG | - | chr6.3:77050133-77050152 | None:intergenic | 35.0% | |
| AGGTTAAAGAAGAGCTTGTA+TGG | + | chr6.3:77050504-77050523 | MS.gene51267:intron | 35.0% | |
| ATCACGAGAGATAAGCAAAA+AGG | + | chr6.3:77050783-77050802 | MS.gene51267:intron | 35.0% | |
| ATCTCTTGAAGAAGCAACAA+TGG | - | chr6.3:77050611-77050630 | None:intergenic | 35.0% | |
| ATGAAGGTTATGCACTCAAA+AGG | + | chr6.3:77049001-77049020 | MS.gene51267:CDS | 35.0% | |
| ATTAGGCCATATGAGTGAAA+AGG | + | chr6.3:77048976-77048995 | MS.gene51267:CDS | 35.0% | |
| ATTCCATATGCTTCAGCAAT+TGG | + | chr6.3:77050963-77050982 | MS.gene51267:intron | 35.0% | |
| ATTTCTATTGACCGAAGACT+TGG | - | chr6.3:77049034-77049053 | None:intergenic | 35.0% | |
| CAAGGATTGTTAACAGAGTT+AGG | + | chr6.3:77051350-77051369 | MS.gene51267:intron | 35.0% | |
| CACCTTTGTTAACATATCTG+CGG | - | chr6.3:77051553-77051572 | None:intergenic | 35.0% | |
| CAGAAGGATTCTCAGAAAAA+GGG | + | chr6.3:77050463-77050482 | MS.gene51267:intron | 35.0% | |
| CATGCTTCATCATAATCTTC+AGG | - | chr6.3:77050078-77050097 | None:intergenic | 35.0% | |
| CGAGAACAAAGCACATATAT+AGG | + | chr6.3:77051450-77051469 | MS.gene51267:intron | 35.0% | |
| CTAGAAGACCTTCTTAATTC+AGG | - | chr6.3:77049997-77050016 | None:intergenic | 35.0% | |
| GAACAATCTTGTAAGGTTGT+GGG | + | chr6.3:77048683-77048702 | MS.gene51267:intron | 35.0% | |
| GAAGTACAAACATTTCTCTG+TGG | - | chr6.3:77051123-77051142 | None:intergenic | 35.0% | |
| GACACTTCAAAAATCAGTGT+AGG | + | chr6.3:77048459-77048478 | MS.gene51267:CDS | 35.0% | |
| GAGTTTGACATGAAGGATTT+AGG | + | chr6.3:77050732-77050751 | MS.gene51267:intron | 35.0% | |
| GATGACTGGAAGATTTCAAA+AGG | + | chr6.3:77048842-77048861 | MS.gene51267:CDS | 35.0% | |
| GTAAACTTTACCAAGGTTAC+CGG | - | chr6.3:77048654-77048673 | None:intergenic | 35.0% | |
| GTCAAAAGAGTTTGACATGA+AGG | + | chr6.3:77050725-77050744 | MS.gene51267:intron | 35.0% | |
| TAAACTTTACCAAGGTTACC+GGG | - | chr6.3:77048653-77048672 | None:intergenic | 35.0% | |
| TACATGTTGTTAACTGATGG+AGG | + | chr6.3:77050048-77050067 | MS.gene51267:CDS | 35.0% | |
| TCATCCATCTCTACATAAAC+AGG | - | chr6.3:77049874-77049893 | None:intergenic | 35.0% | |
| TCTTCATGGAGACTTAAATG+AGG | + | chr6.3:77050422-77050441 | MS.gene51267:intron | 35.0% | |
| TGAACAATCTTGTAAGGTTG+TGG | + | chr6.3:77048682-77048701 | MS.gene51267:intron | 35.0% | |
| TGGTATCAAATTTGACGATG+AGG | + | chr6.3:77048127-77048146 | MS.gene51267:CDS | 35.0% | |
| TTAGGCCATATGAGTGAAAA+GGG | + | chr6.3:77048977-77048996 | MS.gene51267:CDS | 35.0% | |
| TTCATATTCACCACCATTGT+CGG | - | chr6.3:77049344-77049363 | None:intergenic | 35.0% | |
| TTCCAAGGTAAACTTTACCA+AGG | - | chr6.3:77048661-77048680 | None:intergenic | 35.0% | |
| TTCTTCAAGAATTATGTCCC+CGG | + | chr6.3:77048632-77048651 | MS.gene51267:intron | 35.0% | |
| TTGTTGCAACTGCAATCAAA+TGG | - | chr6.3:77048928-77048947 | None:intergenic | 35.0% | |
| TTTGATCTCCAATCAGACAT+GGG | + | chr6.3:77050152-77050171 | MS.gene51267:intron | 35.0% | |
| ! | ACTACGATGATTTCTGGATT+TGG | - | chr6.3:77048393-77048412 | None:intergenic | 35.0% |
| ! | ATTTCTGGATTTGGATTGTC+TGG | - | chr6.3:77048384-77048403 | None:intergenic | 35.0% |
| ! | CTCTCACATCTTAGAGTTTT+CGG | + | chr6.3:77049628-77049647 | MS.gene51267:intron | 35.0% |
| ! | CTTTTATCGATGATCACTCT+AGG | + | chr6.3:77049209-77049228 | MS.gene51267:intron | 35.0% |
| ! | TAAGTTGAATGGGTCTGTAT+GGG | + | chr6.3:77048724-77048743 | MS.gene51267:intron | 35.0% |
| ! | TCTGGTATTTTATGCTCCAA+TGG | - | chr6.3:77049580-77049599 | None:intergenic | 35.0% |
| !! | AAGAAGTTTTGCTATGAGCA+CGG | + | chr6.3:77049376-77049395 | MS.gene51267:intron | 35.0% |
| !! | AAGCGGTTAAATGGATTTTG+AGG | + | chr6.3:77051084-77051103 | MS.gene51267:intron | 35.0% |
| !! | ATTTGATGATGTTCGTGATC+TGG | + | chr6.3:77048241-77048260 | MS.gene51267:CDS | 35.0% |
| !! | GTTGATGATATGTTAGTAGC+AGG | + | chr6.3:77050663-77050682 | MS.gene51267:intron | 35.0% |
| !! | TTAAGTTGAATGGGTCTGTA+TGG | + | chr6.3:77048723-77048742 | MS.gene51267:intron | 35.0% |
| !!! | TGGATTTTGAGGTATCTAAG+AGG | + | chr6.3:77051095-77051114 | MS.gene51267:intron | 35.0% |
| !!! | TTTTGTTTTCATCATCCCAG+AGG | - | chr6.3:77049759-77049778 | None:intergenic | 35.0% |
| AAACTTTACCAAGGTTACCG+GGG | - | chr6.3:77048652-77048671 | None:intergenic | 40.0% | |
| AAAGGATTCCAGCAGAAAGA+AGG | + | chr6.3:77050282-77050301 | MS.gene51267:intron | 40.0% | |
| AACAGAGTTAGGATTCATGC+AGG | + | chr6.3:77051361-77051380 | MS.gene51267:intron | 40.0% | |
| AACTTCATATACCACTGCCT+TGG | - | chr6.3:77050543-77050562 | None:intergenic | 40.0% | |
| AAGAAAAAGAACTCATGGCC+AGG | + | chr6.3:77050940-77050959 | MS.gene51267:intron | 40.0% | |
| AAGTTGTGCTCAACTTCAGT+TGG | + | chr6.3:77051591-77051610 | MS.gene51267:CDS | 40.0% | |
| AATCGATGAAGGATGATGAG+TGG | + | chr6.3:77047856-77047875 | MS.gene51267:CDS | 40.0% | |
| ACTCGAAATCTATCGAGTGT+TGG | + | chr6.3:77048420-77048439 | MS.gene51267:CDS | 40.0% | |
| AGAGGAAGAAATTCAACCAG+AGG | + | chr6.3:77048335-77048354 | MS.gene51267:CDS | 40.0% | |
| AGCAGGTTTATGTCAAATCC+AGG | + | chr6.3:77051047-77051066 | MS.gene51267:intron | 40.0% | |
| AGCTCAAGTTTCTCCTTCTT+TGG | - | chr6.3:77049124-77049143 | None:intergenic | 40.0% | |
| AGGCTTACCAAAGAACTTCT+GGG | + | chr6.3:77049504-77049523 | MS.gene51267:intron | 40.0% | |
| AGTCAATTCCTTCTTTCTGC+TGG | - | chr6.3:77050293-77050312 | None:intergenic | 40.0% | |
| ATATACATGCACCAACCAGA+AGG | + | chr6.3:77050447-77050466 | MS.gene51267:intron | 40.0% | |
| ATTCTGCCAATTCCTCTGAT+TGG | - | chr6.3:77049927-77049946 | None:intergenic | 40.0% | |
| CAAATCCAGGTAAAGCTCAT+TGG | + | chr6.3:77051060-77051079 | MS.gene51267:intron | 40.0% | |
| CAAATGGGTGTATCGAGTAA+AGG | + | chr6.3:77050215-77050234 | MS.gene51267:intron | 40.0% | |
| CCAGAAGGATTCTCAGAAAA+AGG | + | chr6.3:77050462-77050481 | MS.gene51267:intron | 40.0% | |
| CGCAGATATGTTAACAAAGG+TGG | + | chr6.3:77051551-77051570 | MS.gene51267:CDS | 40.0% | |
| CTCAAGTTTCTCCTTCTTTG+GGG | - | chr6.3:77049122-77049141 | None:intergenic | 40.0% | |
| CTCAGCTACACCATTATGTT+GGG | - | chr6.3:77049434-77049453 | None:intergenic | 40.0% | |
| CTCCAGTTCCTGAATTAAGA+AGG | + | chr6.3:77049986-77050005 | MS.gene51267:CDS | 40.0% | |
| CTCTGTATGCAATACTGAAG+AGG | - | chr6.3:77048312-77048331 | None:intergenic | 40.0% | |
| CTGAGAACTACGATGATTTC+TGG | - | chr6.3:77048399-77048418 | None:intergenic | 40.0% | |
| CTTAATCAACCGAGGTTCAT+CGG | + | chr6.3:77049552-77049571 | MS.gene51267:intron | 40.0% | |
| CTTAATTCAGGAACTGGAGT+AGG | - | chr6.3:77049985-77050004 | None:intergenic | 40.0% | |
| CTTCATCAGATCTCTTCTTG+AGG | + | chr6.3:77051485-77051504 | MS.gene51267:CDS | 40.0% | |
| CTTCCAATTGCTGAAGCATA+TGG | - | chr6.3:77050969-77050988 | None:intergenic | 40.0% | |
| CTTGAAGAAGCAACAATGGT+CGG | - | chr6.3:77050607-77050626 | None:intergenic | 40.0% | |
| CTTGTTCACTCTGATGTTTG+GGG | + | chr6.3:77049142-77049161 | MS.gene51267:intron | 40.0% | |
| CTTTGATCTCCAATCAGACA+TGG | + | chr6.3:77050151-77050170 | MS.gene51267:intron | 40.0% | |
| GAACTAGCTAAGTTACCCAA+GGG | + | chr6.3:77050174-77050193 | MS.gene51267:intron | 40.0% | |
| GACCTTCTTAATTCAGGAAC+TGG | - | chr6.3:77049991-77050010 | None:intergenic | 40.0% | |
| GAGGTGATTGTTCTTGAGAT+AGG | - | chr6.3:77050911-77050930 | None:intergenic | 40.0% | |
| GCGAAAAACTTAATCTCCGT+AGG | + | chr6.3:77048779-77048798 | MS.gene51267:intron | 40.0% | |
| GCTCAAGTTTCTCCTTCTTT+GGG | - | chr6.3:77049123-77049142 | None:intergenic | 40.0% | |
| GCTTGTTCACTCTGATGTTT+GGG | + | chr6.3:77049141-77049160 | MS.gene51267:intron | 40.0% | |
| GGAGCATAAAATACCAGAAG+AGG | + | chr6.3:77049582-77049601 | MS.gene51267:intron | 40.0% | |
| GGAGGAAGAAAAAGAACTCA+TGG | + | chr6.3:77050935-77050954 | MS.gene51267:intron | 40.0% | |
| GGTCAGGCAAAGAAAATTCT+TGG | + | chr6.3:77050753-77050772 | MS.gene51267:intron | 40.0% | |
| GGTTATGGTGAAGATGAGTT+TGG | + | chr6.3:77049727-77049746 | MS.gene51267:intron | 40.0% | |
| GTATTGCATACAGAGTCAAG+AGG | + | chr6.3:77048317-77048336 | MS.gene51267:CDS | 40.0% | |
| GTGAAGACTGCATTTCTTCA+TGG | + | chr6.3:77050408-77050427 | MS.gene51267:intron | 40.0% | |
| GTGTTGGAATTGTGGAAAGA+CGG | + | chr6.3:77048436-77048455 | MS.gene51267:CDS | 40.0% | |
| GTTTGAAAGCTTCATGCACA+AGG | + | chr6.3:77050560-77050579 | MS.gene51267:intron | 40.0% | |
| TAAGTTACCCAAGGGAAAGA+AGG | + | chr6.3:77050182-77050201 | MS.gene51267:intron | 40.0% | |
| TAGGCCATATGAGTGAAAAG+GGG | + | chr6.3:77048978-77048997 | MS.gene51267:CDS | 40.0% | |
| TATGAGTGAAAAGGGGATGA+AGG | + | chr6.3:77048985-77049004 | MS.gene51267:CDS | 40.0% | |
| TCAAGAACAATCACCTCAGA+CGG | + | chr6.3:77050914-77050933 | MS.gene51267:intron | 40.0% | |
| TCAGCTACACCATTATGTTG+GGG | - | chr6.3:77049433-77049452 | None:intergenic | 40.0% | |
| TCAGCTTACTTAATCAACCG+AGG | + | chr6.3:77049544-77049563 | MS.gene51267:intron | 40.0% | |
| TCCCGCAGATATGTTAACAA+AGG | + | chr6.3:77051548-77051567 | MS.gene51267:CDS | 40.0% | |
| TGACATGAAGGATTTAGGTC+AGG | + | chr6.3:77050737-77050756 | MS.gene51267:intron | 40.0% | |
| TGGAAGTTTGATGTACGCAA+TGG | + | chr6.3:77050983-77051002 | MS.gene51267:intron | 40.0% | |
| TGGTGAAGCTCAATACTATC+AGG | + | chr6.3:77050334-77050353 | MS.gene51267:intron | 40.0% | |
| TGTATCTCTTAGAGCCATCA+TGG | - | chr6.3:77050245-77050264 | None:intergenic | 40.0% | |
| TGTTGGAATTGTGGAAAGAC+GGG | + | chr6.3:77048437-77048456 | MS.gene51267:CDS | 40.0% | |
| TTCTGCCAATTCCTCTGATT+GGG | - | chr6.3:77049926-77049945 | None:intergenic | 40.0% | |
| TTTACACTTCGGATGACAGA+AGG | + | chr6.3:77048044-77048063 | MS.gene51267:CDS | 40.0% | |
| TTTCAAGAGATGGAAAGCCA+TGG | + | chr6.3:77049279-77049298 | MS.gene51267:intron | 40.0% | |
| ! | AAGTGCACTTTCATCGGTTA+TGG | + | chr6.3:77049712-77049731 | MS.gene51267:intron | 40.0% |
| ! | ACTTGTCTCATTTTCCACCA+TGG | - | chr6.3:77049299-77049318 | None:intergenic | 40.0% |
| ! | AGCTTGTTCACTCTGATGTT+TGG | + | chr6.3:77049140-77049159 | MS.gene51267:intron | 40.0% |
| ! | ATAGTATTGAGCTTCACCAC+TGG | - | chr6.3:77050333-77050352 | None:intergenic | 40.0% |
| ! | ATGATCACTCTAGGAAGGTA+TGG | + | chr6.3:77049218-77049237 | MS.gene51267:intron | 40.0% |
| ! | ATTAAGTTTTTCGCGAGGTC+GGG | - | chr6.3:77048773-77048792 | None:intergenic | 40.0% |
| ! | CTCAAGATAGAGATTTTCGC+TGG | - | chr6.3:77050379-77050398 | None:intergenic | 40.0% |
| ! | GAAAGTGCACTTCTTGGATT+TGG | - | chr6.3:77049704-77049723 | None:intergenic | 40.0% |
| ! | GATATGTTCTTTGGAGAGCA+CGG | + | chr6.3:77048553-77048572 | MS.gene51267:intron | 40.0% |
| ! | GATTAAGTTTTTCGCGAGGT+CGG | - | chr6.3:77048774-77048793 | None:intergenic | 40.0% |
| ! | TATCGATGATCACTCTAGGA+AGG | + | chr6.3:77049213-77049232 | MS.gene51267:intron | 40.0% |
| ! | TCATCCCCTTTTCACTCATA+TGG | - | chr6.3:77048985-77049004 | None:intergenic | 40.0% |
| ! | TCCAAGAAGTGCACTTTCAT+CGG | + | chr6.3:77049706-77049725 | MS.gene51267:intron | 40.0% |
| ! | TGACGCGTTGATATGTTCTT+TGG | + | chr6.3:77048544-77048563 | MS.gene51267:intron | 40.0% |
| ! | TGATCACTCTAGGAAGGTAT+GGG | + | chr6.3:77049219-77049238 | MS.gene51267:intron | 40.0% |
| ! | TTTCATCTTTTTGCTTCCCG+AGG | - | chr6.3:77048222-77048241 | None:intergenic | 40.0% |
| ! | TTTCTGAGAATCCTTCTGGT+TGG | - | chr6.3:77050461-77050480 | None:intergenic | 40.0% |
| !! | AGAAGGCACTTCACAACAAA+TGG | + | chr6.3:77050199-77050218 | MS.gene51267:intron | 40.0% |
| !! | AGAAGTTTTGCTATGAGCAC+GGG | + | chr6.3:77049377-77049396 | MS.gene51267:intron | 40.0% |
| !! | CCTTTTTCTGAGAATCCTTC+TGG | - | chr6.3:77050465-77050484 | None:intergenic | 40.0% |
| !! | GAAGGCACTTCACAACAAAT+GGG | + | chr6.3:77050200-77050219 | MS.gene51267:intron | 40.0% |
| !! | TCATCATCCTTCATCGATTC+TGG | - | chr6.3:77047855-77047874 | None:intergenic | 40.0% |
| !! | TCTATCGAGTGTTGGAATTG+TGG | + | chr6.3:77048428-77048447 | MS.gene51267:CDS | 40.0% |
| !! | TCTGGTTTCTTTTCTGTGAG+AGG | - | chr6.3:77047837-77047856 | None:intergenic | 40.0% |
| AAATCTTCCAGTCATCACCG+TGG | - | chr6.3:77048838-77048857 | None:intergenic | 45.0% | |
| AAGAGCCTTCATAAGACCAG+CGG | - | chr6.3:77047967-77047986 | None:intergenic | 45.0% | |
| AAGCTTAGAACCGACAATGG+TGG | + | chr6.3:77049331-77049350 | MS.gene51267:intron | 45.0% | |
| AAGTGGAAGAACCCCAAAGA+AGG | + | chr6.3:77049108-77049127 | MS.gene51267:intron | 45.0% | |
| AATGCTTCCCACCAATGGAT+GGG | - | chr6.3:77049180-77049199 | None:intergenic | 45.0% | |
| AATTATGTCCCCGGTAACCT+TGG | + | chr6.3:77048641-77048660 | MS.gene51267:intron | 45.0% | |
| ACAGTAGCACTCCAACTATC+TGG | - | chr6.3:77048182-77048201 | None:intergenic | 45.0% | |
| AGAATGGAAAGAACTGTGCC+AGG | + | chr6.3:77049403-77049422 | MS.gene51267:intron | 45.0% | |
| AGAGTCAGCTTTCAGACAAG+TGG | + | chr6.3:77049091-77049110 | MS.gene51267:intron | 45.0% | |
| AGATGAGATTCCCCAATCAG+AGG | + | chr6.3:77049912-77049931 | MS.gene51267:CDS | 45.0% | |
| AGCACTCCAACTATCTGGTA+GGG | - | chr6.3:77048177-77048196 | None:intergenic | 45.0% | |
| AGCTAGTTCCCATGTCTGAT+TGG | - | chr6.3:77050163-77050182 | None:intergenic | 45.0% | |
| AGGTAAAGCTCATTGGGAAG+CGG | + | chr6.3:77051067-77051086 | MS.gene51267:intron | 45.0% | |
| ATGCAGTGGGAGTTATTAGC+AGG | + | chr6.3:77051030-77051049 | MS.gene51267:intron | 45.0% | |
| ATGGGTGTATCGAGTAAAGG+AGG | + | chr6.3:77050218-77050237 | MS.gene51267:intron | 45.0% | |
| CAAATCAGTTAGCACACCGT+TGG | + | chr6.3:77050872-77050891 | MS.gene51267:intron | 45.0% | |
| CAACGGTGTGCTAACTGATT+TGG | - | chr6.3:77050874-77050893 | None:intergenic | 45.0% | |
| CAAGTGCTTGTCTATCGAGA+AGG | - | chr6.3:77047884-77047903 | None:intergenic | 45.0% | |
| CACCACTGGAGCAAAAATCT+CGG | - | chr6.3:77050319-77050338 | None:intergenic | 45.0% | |
| CAGATCTCTTCTTGAGGATG+AGG | + | chr6.3:77051491-77051510 | MS.gene51267:CDS | 45.0% | |
| CAGGCTTACCAAAGAACTTC+TGG | + | chr6.3:77049503-77049522 | MS.gene51267:intron | 45.0% | |
| CGAGCCTGTTTATGTAGAGA+TGG | + | chr6.3:77049867-77049886 | MS.gene51267:CDS | 45.0% | |
| CTCATTGGGAAGCGGTTAAA+TGG | + | chr6.3:77051075-77051094 | MS.gene51267:intron | 45.0% | |
| CTTCTCGATAGACAAGCACT+TGG | + | chr6.3:77047882-77047901 | MS.gene51267:CDS | 45.0% | |
| GAAAGCTTCATGCACAAGGA+AGG | + | chr6.3:77050564-77050583 | MS.gene51267:intron | 45.0% | |
| GAAGTAATGCTTCCCACCAA+TGG | - | chr6.3:77049185-77049204 | None:intergenic | 45.0% | |
| GAATCAAGAGGCGAAAGATG+AGG | + | chr6.3:77048493-77048512 | MS.gene51267:CDS | 45.0% | |
| GAATCCTTTGACCACTAGTC+GGG | - | chr6.3:77050271-77050290 | None:intergenic | 45.0% | |
| GATTCCCCAATCAGAGGAAT+TGG | + | chr6.3:77049918-77049937 | MS.gene51267:CDS | 45.0% | |
| GATTGGGGAATCTCATCTGT+GGG | - | chr6.3:77049910-77049929 | None:intergenic | 45.0% | |
| GCTCAGCTACACCATTATGT+TGG | - | chr6.3:77049435-77049454 | None:intergenic | 45.0% | |
| GGAAAGAGAATATGGTGTGC+AGG | + | chr6.3:77050484-77050503 | MS.gene51267:intron | 45.0% | |
| GGAACTAGCTAAGTTACCCA+AGG | + | chr6.3:77050173-77050192 | MS.gene51267:intron | 45.0% | |
| GGAATCCTTTGACCACTAGT+CGG | - | chr6.3:77050272-77050291 | None:intergenic | 45.0% | |
| GGTACTCTTTACAAGACAGC+TGG | + | chr6.3:77048896-77048915 | MS.gene51267:CDS | 45.0% | |
| GTAGAGATGGATGATGTTCC+AGG | + | chr6.3:77049880-77049899 | MS.gene51267:CDS | 45.0% | |
| TAATGCTTCCCACCAATGGA+TGG | - | chr6.3:77049181-77049200 | None:intergenic | 45.0% | |
| TACATACTCAGCCTCTGTAG+TGG | - | chr6.3:77051294-77051313 | None:intergenic | 45.0% | |
| TACGTAGATGCAGACTTTGC+TGG | + | chr6.3:77051170-77051189 | MS.gene51267:intron | 45.0% | |
| TACTCAGTGAAGAGATCCGA+CGG | + | chr6.3:77048264-77048283 | MS.gene51267:CDS | 45.0% | |
| TAGCACTCCAACTATCTGGT+AGG | - | chr6.3:77048178-77048197 | None:intergenic | 45.0% | |
| TAGCAGGCTCAGACATTGAT+GGG | + | chr6.3:77050679-77050698 | MS.gene51267:intron | 45.0% | |
| TAGTCAGAGTGCGATACATC+TGG | + | chr6.3:77051406-77051425 | MS.gene51267:intron | 45.0% | |
| TCGCCTCTTGATTCTTTGCT+GGG | - | chr6.3:77048487-77048506 | None:intergenic | 45.0% | |
| TCTGCCAATTCCTCTGATTG+GGG | - | chr6.3:77049925-77049944 | None:intergenic | 45.0% | |
| TCTTGTAAGGTTGTGGGCAA+AGG | + | chr6.3:77048689-77048708 | MS.gene51267:intron | 45.0% | |
| TGAGGCGGTTGTTTACACTT+CGG | + | chr6.3:77048033-77048052 | MS.gene51267:CDS | 45.0% | |
| TGATGAAGCATGTCAGACCA+CGG | + | chr6.3:77050086-77050105 | MS.gene51267:CDS | 45.0% | |
| TGATTGGGGAATCTCATCTG+TGG | - | chr6.3:77049911-77049930 | None:intergenic | 45.0% | |
| TGCTGAAGCATATGGAATCC+TGG | - | chr6.3:77050961-77050980 | None:intergenic | 45.0% | |
| TGTCTTCCCTACCAGATAGT+TGG | + | chr6.3:77048168-77048187 | MS.gene51267:CDS | 45.0% | |
| TTCGCCTCTTGATTCTTTGC+TGG | - | chr6.3:77048488-77048507 | None:intergenic | 45.0% | |
| TTTACCACGTCCATTTCCTC+TGG | - | chr6.3:77048354-77048373 | None:intergenic | 45.0% | |
| TTTCCACTCCATACCTCTTC+TGG | - | chr6.3:77049598-77049617 | None:intergenic | 45.0% | |
| ! | ACCGATGAAAGTGCACTTCT+TGG | - | chr6.3:77049710-77049729 | None:intergenic | 45.0% |
| ! | AGAGGTATGGAGTGGAAAAG+AGG | + | chr6.3:77049600-77049619 | MS.gene51267:intron | 45.0% |
| ! | AGGCGAAAATGACTTGCCAA+CGG | - | chr6.3:77050891-77050910 | None:intergenic | 45.0% |
| ! | ATACCAGAAGAGGTATGGAG+TGG | + | chr6.3:77049592-77049611 | MS.gene51267:intron | 45.0% |
| ! | CGGAGATTAAGTTTTTCGCG+AGG | - | chr6.3:77048778-77048797 | None:intergenic | 45.0% |
| ! | GATCACCGAAGAAGTACAAC+TGG | + | chr6.3:77051200-77051219 | MS.gene51267:intron | 45.0% |
| ! | TCTTTTTCTTCCTCCGTCTG+AGG | - | chr6.3:77050930-77050949 | None:intergenic | 45.0% |
| ! | TGAAGTGCCTTCTTTCCCTT+GGG | - | chr6.3:77050192-77050211 | None:intergenic | 45.0% |
| ! | TGTTTTCATCATCCCAGAGG+CGG | - | chr6.3:77049756-77049775 | None:intergenic | 45.0% |
| ! | TTGGTACTGGAGCAGTTAGT+TGG | + | chr6.3:77051237-77051256 | MS.gene51267:intron | 45.0% |
| !! | TGTCGCTTTATCCACTACAG+AGG | + | chr6.3:77051280-77051299 | MS.gene51267:intron | 45.0% |
| AAAGCCCGACTAGTGGTCAA+AGG | + | chr6.3:77050264-77050283 | MS.gene51267:intron | 50.0% | |
| AACACAACCACCAACGACTC+AGG | + | chr6.3:77049838-77049857 | MS.gene51267:intron | 50.0% | |
| AAGTTCGATGGTGCGGACTT+TGG | + | chr6.3:77047759-77047778 | MS.gene51267:CDS | 50.0% | |
| AATGGTCGGCATTGCACTTC+TGG | - | chr6.3:77050593-77050612 | None:intergenic | 50.0% | |
| ACAACTGTCCCATCCATTGG+TGG | + | chr6.3:77049169-77049188 | MS.gene51267:intron | 50.0% | |
| ACTCTTTCTACCGCGAGCTA+TGG | - | chr6.3:77048876-77048895 | None:intergenic | 50.0% | |
| AGAACAATCACCTCAGACGG+AGG | + | chr6.3:77050917-77050936 | MS.gene51267:intron | 50.0% | |
| AGACCACGGATGCTAGTAAG+TGG | + | chr6.3:77050100-77050119 | MS.gene51267:intron | 50.0% | |
| AGAGTGCGATACATCTGGCA+AGG | + | chr6.3:77051411-77051430 | MS.gene51267:intron | 50.0% | |
| ATAGCTCGCGGTAGAAAGAG+TGG | + | chr6.3:77048875-77048894 | MS.gene51267:CDS | 50.0% | |
| ATCTCATCTGTGGGACTTCC+TGG | - | chr6.3:77049901-77049920 | None:intergenic | 50.0% | |
| ATGGCCTGAAACAAGCTCCA+AGG | + | chr6.3:77050523-77050542 | MS.gene51267:intron | 50.0% | |
| ATTCACCCAACTCTCTCCGT+CGG | - | chr6.3:77048283-77048302 | None:intergenic | 50.0% | |
| CAACTGTCCCATCCATTGGT+GGG | + | chr6.3:77049170-77049189 | MS.gene51267:intron | 50.0% | |
| CAAGAGATGGAAAGCCATGG+TGG | + | chr6.3:77049282-77049301 | MS.gene51267:intron | 50.0% | |
| CCAACAACTGTCCCATCCAT+TGG | + | chr6.3:77049166-77049185 | MS.gene51267:intron | 50.0% | |
| CCAATGGATGGGACAGTTGT+TGG | - | chr6.3:77049169-77049188 | None:intergenic | 50.0% | |
| CCAGACATTGGTCATGCAGT+GGG | + | chr6.3:77051017-77051036 | MS.gene51267:intron | 50.0% | |
| CGAGTAAAGGAGGACCATGA+TGG | + | chr6.3:77050228-77050247 | MS.gene51267:intron | 50.0% | |
| CTATGAGCACGGGATCAGAA+TGG | + | chr6.3:77049387-77049406 | MS.gene51267:intron | 50.0% | |
| CTTAATCTCCGTAGGCCAGT+TGG | + | chr6.3:77048787-77048806 | MS.gene51267:intron | 50.0% | |
| GACCACGGATGCTAGTAAGT+GGG | + | chr6.3:77050101-77050120 | MS.gene51267:intron | 50.0% | |
| GAGATACAAAGCCCGACTAG+TGG | + | chr6.3:77050257-77050276 | MS.gene51267:intron | 50.0% | |
| GAGTCTTGGGTGTTAGACTC+TGG | + | chr6.3:77048578-77048597 | MS.gene51267:intron | 50.0% | |
| GCAAAAGAGAAAACCACCGC+TGG | + | chr6.3:77047948-77047967 | MS.gene51267:CDS | 50.0% | |
| GCTCCCAGCAAAGAATCAAG+AGG | + | chr6.3:77048481-77048500 | MS.gene51267:CDS | 50.0% | |
| GCTTCCCAATGAGCTTTACC+TGG | - | chr6.3:77051068-77051087 | None:intergenic | 50.0% | |
| GCTTCTGCCCAGAAGTTCTT+TGG | - | chr6.3:77049514-77049533 | None:intergenic | 50.0% | |
| GGCTACACAACAGTCTTCCA+CGG | + | chr6.3:77048818-77048837 | MS.gene51267:CDS | 50.0% | |
| GTAGCAGGCTCAGACATTGA+TGG | + | chr6.3:77050678-77050697 | MS.gene51267:intron | 50.0% | |
| TCAACCAGAGGAAATGGACG+TGG | + | chr6.3:77048347-77048366 | MS.gene51267:CDS | 50.0% | |
| TGAAACAAGCTCCAAGGCAG+TGG | + | chr6.3:77050529-77050548 | MS.gene51267:intron | 50.0% | |
| TGTACGCAATGGTCTGTACG+AGG | + | chr6.3:77050994-77051013 | MS.gene51267:intron | 50.0% | |
| ! | AATGTTGCTTCCACCTCAGG+AGG | + | chr6.3:77048518-77048537 | MS.gene51267:CDS | 50.0% |
| ! | ACTGCCTTGGAGCTTGTTTC+AGG | - | chr6.3:77050530-77050549 | None:intergenic | 50.0% |
| ! | CACCGAGATTTTTGCTCCAG+TGG | + | chr6.3:77050314-77050333 | MS.gene51267:intron | 50.0% |
| ! | GCAAATGTTGCTTCCACCTC+AGG | + | chr6.3:77048515-77048534 | MS.gene51267:CDS | 50.0% |
| ! | GTGAAGTGCCTTCTTTCCCT+TGG | - | chr6.3:77050193-77050212 | None:intergenic | 50.0% |
| !! | AACCACCGCTGGTCTTATGA+AGG | + | chr6.3:77047959-77047978 | MS.gene51267:CDS | 50.0% |
| !!! | ATGGTGCGGACTTTGGCTTT+TGG | + | chr6.3:77047766-77047785 | MS.gene51267:CDS | 50.0% |
| ACAGCTGTGAGTAGCTCCTC+GGG | + | chr6.3:77048203-77048222 | MS.gene51267:CDS | 55.0% | |
| AGAAGCTTGCGTGTGCAGTC+AGG | + | chr6.3:77049484-77049503 | MS.gene51267:intron | 55.0% | |
| AGAGATCCGACGGAGAGAGT+TGG | + | chr6.3:77048274-77048293 | MS.gene51267:CDS | 55.0% | |
| AGCCTTCATAAGACCAGCGG+TGG | - | chr6.3:77047964-77047983 | None:intergenic | 55.0% | |
| ATGAGTTTGGCTACCGCCTC+TGG | + | chr6.3:77049740-77049759 | MS.gene51267:intron | 55.0% | |
| CACAGCTGTGAGTAGCTCCT+CGG | + | chr6.3:77048202-77048221 | MS.gene51267:CDS | 55.0% | |
| CAGTCTTCCACGGTGATGAC+TGG | + | chr6.3:77048828-77048847 | MS.gene51267:CDS | 55.0% | |
| CCAGGCACTCCCCAACATAA+TGG | + | chr6.3:77049421-77049440 | MS.gene51267:intron | 55.0% | |
| CCCACTGCATGACCAATGTC+TGG | - | chr6.3:77051020-77051039 | None:intergenic | 55.0% | |
| CTCCCACTTACTAGCATCCG+TGG | - | chr6.3:77050106-77050125 | None:intergenic | 55.0% | |
| CTCGCTCAATCCTGAGTCGT+TGG | - | chr6.3:77049851-77049870 | None:intergenic | 55.0% | |
| GAGATCCGACGGAGAGAGTT+GGG | + | chr6.3:77048275-77048294 | MS.gene51267:CDS | 55.0% | |
| GCCAGACATTGGTCATGCAG+TGG | + | chr6.3:77051016-77051035 | MS.gene51267:intron | 55.0% | |
| GCTCAATCCTGAGTCGTTGG+TGG | - | chr6.3:77049848-77049867 | None:intergenic | 55.0% | |
| GGAACTGGAGTAGGATGCAC+TGG | - | chr6.3:77049976-77049995 | None:intergenic | 55.0% | |
| GGTGCAATGACCATAGCTCG+CGG | + | chr6.3:77048863-77048882 | MS.gene51267:CDS | 55.0% | |
| GTCTGTACGAGGCCAGACAT+TGG | + | chr6.3:77051005-77051024 | MS.gene51267:intron | 55.0% | |
| TGACTGCACACGCAAGCTTC+TGG | - | chr6.3:77049485-77049504 | None:intergenic | 55.0% | |
| TGAGTTTGGCTACCGCCTCT+GGG | + | chr6.3:77049741-77049760 | MS.gene51267:intron | 55.0% | |
| TGTAGCCTTCGTCAGCCAAC+TGG | - | chr6.3:77048805-77048824 | None:intergenic | 55.0% | |
| ! | GATGACAGAAGGCGCATCAG+TGG | + | chr6.3:77048055-77048074 | MS.gene51267:CDS | 55.0% |
| ! | GGAGAGCACGGAAGAGTCTT+GGG | + | chr6.3:77048565-77048584 | MS.gene51267:intron | 55.0% |
| ! | GGATGCACTGGTGTGTCAGA+CGG | - | chr6.3:77049964-77049983 | None:intergenic | 55.0% |
| ! | TGGAGAGCACGGAAGAGTCT+TGG | + | chr6.3:77048564-77048583 | MS.gene51267:intron | 55.0% |
| ! | TTCGTCAGCCAACTGGCCTA+CGG | - | chr6.3:77048798-77048817 | None:intergenic | 55.0% |
| !! | CCAATGGCACCGATGAACCT+CGG | - | chr6.3:77049564-77049583 | None:intergenic | 55.0% |
| !! | CCATTATGTTGGGGAGTGCC+TGG | - | chr6.3:77049424-77049443 | None:intergenic | 55.0% |
| GTAGGCCAGTTGGCTGACGA+AGG | + | chr6.3:77048797-77048816 | MS.gene51267:intron | 60.0% | |
| GTTGCTTCCACCTCAGGAGG+AGG | + | chr6.3:77048521-77048540 | MS.gene51267:CDS | 60.0% | |
| !! | CCGAGGTTCATCGGTGCCAT+TGG | + | chr6.3:77049561-77049580 | MS.gene51267:intron | 60.0% |
| CAACGCGTCACCTCCTCCTG+AGG | - | chr6.3:77048534-77048553 | None:intergenic | 65.0% | |
| CGCGTCACCTCCTCCTGAGG+TGG | - | chr6.3:77048531-77048550 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 77047726 | 77051626 | 77047726 | ID=MS.gene51267 |
| chr6.3 | mRNA | 77047726 | 77051626 | 77047726 | ID=MS.gene51267.t1;Parent=MS.gene51267 |
| chr6.3 | exon | 77047726 | 77048542 | 77047726 | ID=MS.gene51267.t1.exon1;Parent=MS.gene51267.t1 |
| chr6.3 | CDS | 77047726 | 77048542 | 77047726 | ID=cds.MS.gene51267.t1;Parent=MS.gene51267.t1 |
| chr6.3 | exon | 77048801 | 77049109 | 77048801 | ID=MS.gene51267.t1.exon2;Parent=MS.gene51267.t1 |
| chr6.3 | CDS | 77048801 | 77049109 | 77048801 | ID=cds.MS.gene51267.t1;Parent=MS.gene51267.t1 |
| chr6.3 | exon | 77049860 | 77050114 | 77049860 | ID=MS.gene51267.t1.exon3;Parent=MS.gene51267.t1 |
| chr6.3 | CDS | 77049860 | 77050114 | 77049860 | ID=cds.MS.gene51267.t1;Parent=MS.gene51267.t1 |
| chr6.3 | exon | 77051472 | 77051626 | 77051472 | ID=MS.gene51267.t1.exon4;Parent=MS.gene51267.t1 |
| chr6.3 | CDS | 77051472 | 77051626 | 77051472 | ID=cds.MS.gene51267.t1;Parent=MS.gene51267.t1 |
| Gene Sequence |
| Protein sequence |
