Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51268.t1 | BBH05442.1 | 66.9 | 468 | 62 | 3 | 1 | 375 | 1 | 468 | 1.20E-146 | 530 |
| MS.gene51268.t1 | BBH05442.1 | 50.8 | 120 | 51 | 2 | 367 | 482 | 710 | 825 | 3.10E-17 | 100.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51268.t1 | P10978 | 26.5 | 475 | 236 | 10 | 7 | 375 | 5 | 472 | 6.4e-40 | 166.8 |
| MS.gene51268.t1 | P10978 | 48.1 | 54 | 28 | 0 | 456 | 509 | 1272 | 1325 | 5.5e-07 | 57.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51268.t1 | A0A4Y1RM46 | 66.9 | 468 | 62 | 3 | 1 | 375 | 1 | 468 | 8.6e-147 | 530.0 |
| MS.gene51268.t1 | A0A4Y1RM46 | 50.8 | 120 | 51 | 2 | 367 | 482 | 710 | 825 | 2.2e-17 | 100.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052735 | MS.gene51268 | 0.811347 | 7.33E-51 | -1.69E-46 |
| MS.gene052736 | MS.gene51268 | 0.825918 | 3.61E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51268.t1 | MTR_2g039140 | 40.217 | 184 | 77 | 2 | 1 | 183 | 120 | 271 | 2.31e-31 | 122 |
| MS.gene51268.t1 | MTR_4g036430 | 89.744 | 39 | 4 | 0 | 1 | 39 | 31 | 69 | 3.16e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51268.t1 | AT3G29785 | 57.778 | 90 | 37 | 1 | 11 | 100 | 7 | 95 | 1.20e-29 | 112 |
Find 113 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATACCAACTGAACTTAAT+TGG | 0.122345 | 6.3:-77052839 | None:intergenic |
| CTGAGAACTACGATGATTTC+TGG | 0.189947 | 6.3:-77053123 | None:intergenic |
| ATCTCATCTGTGGGACTTCC+TGG | 0.243179 | 6.3:-77054625 | None:intergenic |
| TCATCATCCTTCATCGATTC+TGG | 0.247368 | 6.3:-77052579 | None:intergenic |
| CTAGAAGACCTTCTTAATTC+AGG | 0.247761 | 6.3:-77054721 | None:intergenic |
| TTCGCCTCTTGATTCTTTGC+TGG | 0.253882 | 6.3:-77053212 | None:intergenic |
| CTCTGGTCTCTTATTCTAAC+AGG | 0.293382 | 6.3:-77056341 | None:intergenic |
| ACTACGATGATTTCTGGATT+TGG | 0.314338 | 6.3:-77053117 | None:intergenic |
| TTCTGCCAATTCCTCTGATT+GGG | 0.327914 | 6.3:-77054650 | None:intergenic |
| ATTTCTGGATTTGGATTGTC+TGG | 0.336440 | 6.3:-77053108 | None:intergenic |
| ATTCTGCCAATTCCTCTGAT+TGG | 0.336830 | 6.3:-77054651 | None:intergenic |
| GATACCAACTGAACTTAATT+GGG | 0.373662 | 6.3:-77052838 | None:intergenic |
| TCGCCTCTTGATTCTTTGCT+GGG | 0.374564 | 6.3:-77053211 | None:intergenic |
| ATGGTGCGGACTTTGGCTTT+TGG | 0.377376 | 6.3:+77052493 | MS.gene51268:CDS |
| CAAATGAAAATCCTAATCTA+TGG | 0.386419 | 6.3:+77053672 | MS.gene51268:CDS |
| AATCTCTTGTGCCATAGATT+AGG | 0.388549 | 6.3:-77053683 | None:intergenic |
| CATGCTTCATCATAATCTTC+AGG | 0.392057 | 6.3:-77054802 | None:intergenic |
| GTAGAGATGGATGATGTTCC+AGG | 0.394130 | 6.3:+77054607 | MS.gene51268:CDS |
| GATTCCCCAATCAGAGGAAT+TGG | 0.403290 | 6.3:+77054645 | MS.gene51268:CDS |
| GACCTTCTTAATTCAGGAAC+TGG | 0.408428 | 6.3:-77054715 | None:intergenic |
| ACAGTAGCACTCCAACTATC+TGG | 0.413891 | 6.3:-77052906 | None:intergenic |
| TCATCCATCTCTACATAAAC+AGG | 0.414467 | 6.3:-77054598 | None:intergenic |
| AGAAATTCAACCAGAGGAAA+TGG | 0.417568 | 6.3:+77053068 | MS.gene51268:CDS |
| TGTCTTCCCTACCAGATAGT+TGG | 0.424640 | 6.3:+77052895 | MS.gene51268:CDS |
| TAGTTTATGTATCTGCTGTT+TGG | 0.431465 | 6.3:-77054754 | None:intergenic |
| TGTAGCCTTCGTCAGCCAAC+TGG | 0.439978 | 6.3:-77053529 | None:intergenic |
| GAGATCCGACGGAGAGAGTT+GGG | 0.442215 | 6.3:+77053002 | MS.gene51268:CDS |
| GCAAATGTTGCTTCCACCTC+AGG | 0.445655 | 6.3:+77053242 | MS.gene51268:CDS |
| CAGTCTTCCACGGTGATGAC+TGG | 0.446820 | 6.3:+77053555 | MS.gene51268:CDS |
| AAGTTCGATGGTGCGGACTT+TGG | 0.452497 | 6.3:+77052486 | MS.gene51268:CDS |
| CAGATCTCTTCTTGAGGATG+AGG | 0.452949 | 6.3:+77056218 | MS.gene51268:CDS |
| AATCTATGGCACAAGAGATT+AGG | 0.468903 | 6.3:+77053686 | MS.gene51268:CDS |
| TTAGGCCATATGAGTGAAAA+GGG | 0.472747 | 6.3:+77053704 | MS.gene51268:CDS |
| TGAACTTTATTTGATGCTGA+AGG | 0.474628 | 6.3:-77052732 | None:intergenic |
| ATTTGATGATGTTCGTGATC+TGG | 0.482957 | 6.3:+77052968 | MS.gene51268:CDS |
| AAGGAAAACTACCAAGTCTT+CGG | 0.487272 | 6.3:+77053747 | MS.gene51268:CDS |
| TTTACCACGTCCATTTCCTC+TGG | 0.487326 | 6.3:-77053078 | None:intergenic |
| ACCTTTGTTAACATATCTGC+GGG | 0.491781 | 6.3:-77056276 | None:intergenic |
| TTGTTGCAACTGCAATCAAA+TGG | 0.491822 | 6.3:-77053652 | None:intergenic |
| ATTAGGCCATATGAGTGAAA+AGG | 0.493480 | 6.3:+77053703 | MS.gene51268:CDS |
| CTTAATTCAGGAACTGGAGT+AGG | 0.496648 | 6.3:-77054709 | None:intergenic |
| ATGAAGGTTATGCACTCAAA+AGG | 0.501665 | 6.3:+77053728 | MS.gene51268:CDS |
| CTAACATTGATCAAAATTCA+AGG | 0.505718 | 6.3:+77056243 | MS.gene51268:CDS |
| ATATGTGAAGACTGTATACT+TGG | 0.507653 | 6.3:+77053785 | MS.gene51268:CDS |
| TCTATCGAGTGTTGGAATTG+TGG | 0.512167 | 6.3:+77053155 | MS.gene51268:CDS |
| AACTACATGTTGTTAACTGA+TGG | 0.513907 | 6.3:+77054772 | MS.gene51268:CDS |
| CGCGTCACCTTCTCCTGAGG+TGG | 0.515668 | 6.3:-77053255 | None:intergenic |
| ACTCTTTCTACCGCGAGCTA+TGG | 0.525718 | 6.3:-77053600 | None:intergenic |
| CACAGCTGTGAGTAGCTCCT+CGG | 0.527844 | 6.3:+77052929 | MS.gene51268:CDS |
| CTCCAGTTCCTGAATTAAGA+AGG | 0.530952 | 6.3:+77054713 | MS.gene51268:CDS |
| ATTTCTATTGACCGAAGACT+TGG | 0.531290 | 6.3:-77053758 | None:intergenic |
| TATGAGTGAAAAGGGGATGA+AGG | 0.531430 | 6.3:+77053712 | MS.gene51268:CDS |
| GATGACTGGAAGATTTCAAA+AGG | 0.532022 | 6.3:+77053569 | MS.gene51268:CDS |
| ACAGCTGTGAGTAGCTCCTC+GGG | 0.532462 | 6.3:+77052930 | MS.gene51268:CDS |
| CTTAATCTCCGTAGGCCAGT+TGG | 0.533019 | 6.3:+77053514 | MS.gene51268:intron |
| AAAGAAACCAGAATCGATGA+AGG | 0.539324 | 6.3:+77052572 | MS.gene51268:CDS |
| TGTTGGAATTGTGGAAAGAC+GGG | 0.540082 | 6.3:+77053164 | MS.gene51268:CDS |
| GATTGGGGAATCTCATCTGT+GGG | 0.541163 | 6.3:-77054634 | None:intergenic |
| TGATTGGGGAATCTCATCTG+TGG | 0.543207 | 6.3:-77054635 | None:intergenic |
| CGCAGATATGTTAACAAAGG+TGG | 0.548479 | 6.3:+77056278 | MS.gene51268:CDS |
| AGAGATCCGACGGAGAGAGT+TGG | 0.549236 | 6.3:+77053001 | MS.gene51268:CDS |
| GGTACTCTTTACAAGACAGC+TGG | 0.550162 | 6.3:+77053623 | MS.gene51268:CDS |
| CAAATAAAGTTCATTTGATG+AGG | 0.550433 | 6.3:+77052742 | MS.gene51268:CDS |
| GGAACTGGAGTAGGATGCAC+TGG | 0.552002 | 6.3:-77054700 | None:intergenic |
| AACCACCGCTGGTCTTATGA+AGG | 0.557775 | 6.3:+77052686 | MS.gene51268:CDS |
| TAGCACTCCAACTATCTGGT+AGG | 0.558134 | 6.3:-77052902 | None:intergenic |
| ACTCGAAATCTATCGAGTGT+TGG | 0.561027 | 6.3:+77053147 | MS.gene51268:CDS |
| GTGAAAATTGAAAAGTTCGA+TGG | 0.563926 | 6.3:+77052474 | MS.gene51268:CDS |
| GTGTTGGAATTGTGGAAAGA+CGG | 0.567490 | 6.3:+77053163 | MS.gene51268:CDS |
| CTCTGTATGCAATACTGAAG+AGG | 0.567853 | 6.3:-77053036 | None:intergenic |
| ACAACCCAATTAAGTTCAGT+TGG | 0.568124 | 6.3:+77052834 | MS.gene51268:CDS |
| AAGTTGTGCTCAACTTCAGT+TGG | 0.568559 | 6.3:+77056318 | MS.gene51268:CDS |
| GTTGCTTCCACCTCAGGAGA+AGG | 0.571072 | 6.3:+77053248 | MS.gene51268:CDS |
| TCTGCCAATTCCTCTGATTG+GGG | 0.571085 | 6.3:-77054649 | None:intergenic |
| CTTCATCAGATCTCTTCTTG+AGG | 0.574417 | 6.3:+77056212 | MS.gene51268:CDS |
| TTTACACTTCGGATGACAGA+AGG | 0.576141 | 6.3:+77052771 | MS.gene51268:CDS |
| CTCCCACTTACTAGCATCCG+TGG | 0.588137 | 6.3:-77054830 | None:intergenic |
| GATGACAGAAGGCGCATCAG+TGG | 0.593273 | 6.3:+77052782 | MS.gene51268:CDS |
| CACCTTTGTTAACATATCTG+CGG | 0.595625 | 6.3:-77056277 | None:intergenic |
| AAATGGACGTGGTAAATCAA+AGG | 0.596335 | 6.3:+77053085 | MS.gene51268:CDS |
| AGCACTCCAACTATCTGGTA+GGG | 0.597976 | 6.3:-77052901 | None:intergenic |
| TGAGGCGGTTGTTTACACTT+CGG | 0.598027 | 6.3:+77052760 | MS.gene51268:CDS |
| ATAAAGTTCATTTGATGAGG+CGG | 0.598437 | 6.3:+77052745 | MS.gene51268:CDS |
| CTTCTCGATAGACAAGCACT+TGG | 0.601850 | 6.3:+77052609 | MS.gene51268:CDS |
| CGAGCCTGTTTATGTAGAGA+TGG | 0.602356 | 6.3:+77054594 | MS.gene51268:CDS |
| AATCGATGAAGGATGATGAG+TGG | 0.606445 | 6.3:+77052583 | MS.gene51268:CDS |
| AATTGAAAAGTTCGATGGTG+CGG | 0.608192 | 6.3:+77052479 | MS.gene51268:CDS |
| GGCTACACAACAGTCTTCCA+CGG | 0.609498 | 6.3:+77053545 | MS.gene51268:CDS |
| CAAGTGCTTGTCTATCGAGA+AGG | 0.612004 | 6.3:-77052608 | None:intergenic |
| TATGGCTGCAGACGAAGGAA+AGG | 0.614378 | 6.3:+77052452 | None:intergenic |
| TACATGTTGTTAACTGATGG+AGG | 0.616383 | 6.3:+77054775 | MS.gene51268:CDS |
| GGAGTTATGGCTGCAGACGA+AGG | 0.617375 | 6.3:+77052447 | None:intergenic |
| ATTCACCCAACTCTCTCCGT+CGG | 0.618585 | 6.3:-77053007 | None:intergenic |
| AGCCTTCATAAGACCAGCGG+TGG | 0.620835 | 6.3:-77052688 | None:intergenic |
| GAATCAAGAGGCGAAAGATG+AGG | 0.623736 | 6.3:+77053220 | MS.gene51268:CDS |
| GCAAAAGAGAAAACCACCGC+TGG | 0.626545 | 6.3:+77052675 | MS.gene51268:CDS |
| AGATGAGATTCCCCAATCAG+AGG | 0.627217 | 6.3:+77054639 | MS.gene51268:CDS |
| TGGTATCAAATTTGACGATG+AGG | 0.628760 | 6.3:+77052854 | MS.gene51268:CDS |
| TACTCAGTGAAGAGATCCGA+CGG | 0.629113 | 6.3:+77052991 | MS.gene51268:CDS |
| AGAGGAAGAAATTCAACCAG+AGG | 0.643795 | 6.3:+77053062 | MS.gene51268:CDS |
| CAACGCGTCACCTTCTCCTG+AGG | 0.650082 | 6.3:-77053258 | None:intergenic |
| ATAGCTCGCGGTAGAAAGAG+TGG | 0.650828 | 6.3:+77053602 | MS.gene51268:CDS |
| GTAGGCCAGTTGGCTGACGA+AGG | 0.651906 | 6.3:+77053524 | MS.gene51268:intron |
| TCCCGCAGATATGTTAACAA+AGG | 0.657588 | 6.3:+77056275 | MS.gene51268:CDS |
| TCAACCAGAGGAAATGGACG+TGG | 0.665050 | 6.3:+77053074 | MS.gene51268:CDS |
| GCTCCCAGCAAAGAATCAAG+AGG | 0.671318 | 6.3:+77053208 | MS.gene51268:CDS |
| GGATGCACTGGTGTGTCAGA+CGG | 0.673844 | 6.3:-77054688 | None:intergenic |
| GTATTGCATACAGAGTCAAG+AGG | 0.682691 | 6.3:+77053044 | MS.gene51268:CDS |
| TAGGCCATATGAGTGAAAAG+GGG | 0.691407 | 6.3:+77053705 | MS.gene51268:CDS |
| TGATGAAGCATGTCAGACCA+CGG | 0.691661 | 6.3:+77054813 | MS.gene51268:CDS |
| AAGAGCCTTCATAAGACCAG+CGG | 0.707222 | 6.3:-77052691 | None:intergenic |
| GGTGCAATGACCATAGCTCG+CGG | 0.728572 | 6.3:+77053590 | MS.gene51268:CDS |
| AAATCTTCCAGTCATCACCG+TGG | 0.733529 | 6.3:-77053562 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTAAGATTAAGTTGAAT+GGG | + | chr6.3:77053441-77053460 | MS.gene51268:intron | 20.0% |
| ! | AATTCTTGAAGAATTCTTTC+TGG | - | chr6.3:77053352-77053371 | None:intergenic | 25.0% |
| ! | ACTGGTTATATATTTACTGT+TGG | + | chr6.3:77055945-77055964 | MS.gene51268:intron | 25.0% |
| ! | ATAGCAAAACTTCTTGAATT+TGG | - | chr6.3:77054098-77054117 | None:intergenic | 25.0% |
| ! | ATTCTTGAAGAATTCTTTCT+GGG | - | chr6.3:77053351-77053370 | None:intergenic | 25.0% |
| ! | CAAATAAAGTTCATTTGATG+AGG | + | chr6.3:77052742-77052761 | MS.gene51268:CDS | 25.0% |
| ! | CAAATGAAAATCCTAATCTA+TGG | + | chr6.3:77053672-77053691 | MS.gene51268:CDS | 25.0% |
| ! | CTAACATTGATCAAAATTCA+AGG | + | chr6.3:77056243-77056262 | MS.gene51268:CDS | 25.0% |
| ! | TATATATTTACTGTTGGTAC+TGG | + | chr6.3:77055951-77055970 | MS.gene51268:intron | 25.0% |
| !!! | GAAGTTAAGATTAAGTTGAA+TGG | + | chr6.3:77053440-77053459 | MS.gene51268:intron | 25.0% |
| AAAGAATTGATATGGCTTCA+AGG | + | chr6.3:77056059-77056078 | MS.gene51268:intron | 30.0% | |
| AAATGTTTGTACTTCAGCAA+AGG | + | chr6.3:77055855-77055874 | MS.gene51268:intron | 30.0% | |
| AACTACATGTTGTTAACTGA+TGG | + | chr6.3:77054772-77054791 | MS.gene51268:CDS | 30.0% | |
| AAGCTAGCAAAGAATTGATA+TGG | + | chr6.3:77056051-77056070 | MS.gene51268:intron | 30.0% | |
| AGAAAAAGGGAAAGAGAATA+TGG | + | chr6.3:77055203-77055222 | MS.gene51268:intron | 30.0% | |
| ATAAAATACCAGAAGAGGTA+TGG | + | chr6.3:77054314-77054333 | MS.gene51268:intron | 30.0% | |
| ATAAAGTTCATTTGATGAGG+CGG | + | chr6.3:77052745-77052764 | MS.gene51268:CDS | 30.0% | |
| ATATGTGAAGACTGTATACT+TGG | + | chr6.3:77053785-77053804 | MS.gene51268:CDS | 30.0% | |
| ATCATGAGAGATAAGCAAAA+AGG | + | chr6.3:77055510-77055529 | MS.gene51268:intron | 30.0% | |
| GATACCAACTGAACTTAATT+GGG | - | chr6.3:77052841-77052860 | None:intergenic | 30.0% | |
| GGATGATGAAAACAAAAAGA+TGG | + | chr6.3:77054489-77054508 | MS.gene51268:intron | 30.0% | |
| GTGAAAATTGAAAAGTTCGA+TGG | + | chr6.3:77052474-77052493 | MS.gene51268:CDS | 30.0% | |
| TACAAGATTGTTCATTTCCA+AGG | - | chr6.3:77053403-77053422 | None:intergenic | 30.0% | |
| TAGTTTATGTATCTGCTGTT+TGG | - | chr6.3:77054757-77054776 | None:intergenic | 30.0% | |
| TATAACCAGTTGTACTTCTT+CGG | - | chr6.3:77055935-77055954 | None:intergenic | 30.0% | |
| TATGTGCATATTAGTGATCA+AGG | + | chr6.3:77054388-77054407 | MS.gene51268:intron | 30.0% | |
| TGATACCAACTGAACTTAAT+TGG | - | chr6.3:77052842-77052861 | None:intergenic | 30.0% | |
| TGGAAATGAACAATCTTGTA+AGG | + | chr6.3:77053403-77053422 | MS.gene51268:intron | 30.0% | |
| ! | GTTTTGCAAAGATTCAACAT+GGG | + | chr6.3:77055570-77055589 | MS.gene51268:intron | 30.0% |
| ! | TATTTGAAGCTTTCAAGAGA+TGG | + | chr6.3:77053996-77054015 | MS.gene51268:intron | 30.0% |
| ! | TGAACTTTATTTGATGCTGA+AGG | - | chr6.3:77052735-77052754 | None:intergenic | 30.0% |
| ! | TGTTTTGCAAAGATTCAACA+TGG | + | chr6.3:77055569-77055588 | MS.gene51268:intron | 30.0% |
| AAAAAGCTTAGAACCGACAA+TGG | + | chr6.3:77054055-77054074 | MS.gene51268:intron | 35.0% | |
| AAAGAAACCAGAATCGATGA+AGG | + | chr6.3:77052572-77052591 | MS.gene51268:CDS | 35.0% | |
| AAAGAGTGATGTACAAAGAC+AGG | + | chr6.3:77054539-77054558 | MS.gene51268:intron | 35.0% | |
| AAAGTGCACTTCTTGGATTT+GGG | - | chr6.3:77054430-77054449 | None:intergenic | 35.0% | |
| AAATCCAGGTAAAGCTCATT+GGG | + | chr6.3:77055788-77055807 | MS.gene51268:intron | 35.0% | |
| AAATGGACGTGGTAAATCAA+AGG | + | chr6.3:77053085-77053104 | MS.gene51268:CDS | 35.0% | |
| AACCTTGGTAAAGTTTACCT+TGG | + | chr6.3:77053383-77053402 | MS.gene51268:intron | 35.0% | |
| AAGGAAAACTACCAAGTCTT+CGG | + | chr6.3:77053747-77053766 | MS.gene51268:CDS | 35.0% | |
| AATCAATTCCTTCTTTCTGC+TGG | - | chr6.3:77055020-77055039 | None:intergenic | 35.0% | |
| AATCTATGGCACAAGAGATT+AGG | + | chr6.3:77053686-77053705 | MS.gene51268:CDS | 35.0% | |
| AATCTCTTGTGCCATAGATT+AGG | - | chr6.3:77053686-77053705 | None:intergenic | 35.0% | |
| AATTGAAAAGTTCGATGGTG+CGG | + | chr6.3:77052479-77052498 | MS.gene51268:CDS | 35.0% | |
| ACAACCCAATTAAGTTCAGT+TGG | + | chr6.3:77052834-77052853 | MS.gene51268:CDS | 35.0% | |
| ACCTTTGTTAACATATCTGC+GGG | - | chr6.3:77056279-77056298 | None:intergenic | 35.0% | |
| AGAAATTCAACCAGAGGAAA+TGG | + | chr6.3:77053068-77053087 | MS.gene51268:CDS | 35.0% | |
| AGACTTCATTTCGTCTTTCA+TGG | - | chr6.3:77054860-77054879 | None:intergenic | 35.0% | |
| AGGTTAAAGAAGAGCTTGTA+TGG | + | chr6.3:77055231-77055250 | MS.gene51268:intron | 35.0% | |
| ATCTCTTGAAGAAGCAACAA+TGG | - | chr6.3:77055338-77055357 | None:intergenic | 35.0% | |
| ATGAAGGTTATGCACTCAAA+AGG | + | chr6.3:77053728-77053747 | MS.gene51268:CDS | 35.0% | |
| ATTAGGCCATATGAGTGAAA+AGG | + | chr6.3:77053703-77053722 | MS.gene51268:CDS | 35.0% | |
| ATTCCATATGCTTCAGCAAT+TGG | + | chr6.3:77055690-77055709 | MS.gene51268:intron | 35.0% | |
| ATTTCTATTGACCGAAGACT+TGG | - | chr6.3:77053761-77053780 | None:intergenic | 35.0% | |
| CAAGGATTGTTAACAGAGTT+AGG | + | chr6.3:77056077-77056096 | MS.gene51268:intron | 35.0% | |
| CACCTTTGTTAACATATCTG+CGG | - | chr6.3:77056280-77056299 | None:intergenic | 35.0% | |
| CAGAAGGATTCTCAGAAAAA+GGG | + | chr6.3:77055190-77055209 | MS.gene51268:intron | 35.0% | |
| CATGCTTCATCATAATCTTC+AGG | - | chr6.3:77054805-77054824 | None:intergenic | 35.0% | |
| CGAGAACAAAGCACATATAT+AGG | + | chr6.3:77056177-77056196 | MS.gene51268:intron | 35.0% | |
| CTAGAAGACCTTCTTAATTC+AGG | - | chr6.3:77054724-77054743 | None:intergenic | 35.0% | |
| GAACAATCTTGTAAGGTTGT+GGG | + | chr6.3:77053410-77053429 | MS.gene51268:intron | 35.0% | |
| GAAGTACAAACATTTCTCTG+TGG | - | chr6.3:77055850-77055869 | None:intergenic | 35.0% | |
| GACACTTCAAAAATCAGTGT+AGG | + | chr6.3:77053186-77053205 | MS.gene51268:CDS | 35.0% | |
| GAGTTTGACATGAAGGATTT+AGG | + | chr6.3:77055459-77055478 | MS.gene51268:intron | 35.0% | |
| GATGACTGGAAGATTTCAAA+AGG | + | chr6.3:77053569-77053588 | MS.gene51268:CDS | 35.0% | |
| GTAAACTTTACCAAGGTTAC+CGG | - | chr6.3:77053381-77053400 | None:intergenic | 35.0% | |
| GTCAAAAGAGTTTGACATGA+AGG | + | chr6.3:77055452-77055471 | MS.gene51268:intron | 35.0% | |
| TAAACTTTACCAAGGTTACC+GGG | - | chr6.3:77053380-77053399 | None:intergenic | 35.0% | |
| TACATGTTGTTAACTGATGG+AGG | + | chr6.3:77054775-77054794 | MS.gene51268:CDS | 35.0% | |
| TCATCCATCTCTACATAAAC+AGG | - | chr6.3:77054601-77054620 | None:intergenic | 35.0% | |
| TCTTCATGGAGACTTAAATG+AGG | + | chr6.3:77055149-77055168 | MS.gene51268:intron | 35.0% | |
| TGAACAATCTTGTAAGGTTG+TGG | + | chr6.3:77053409-77053428 | MS.gene51268:intron | 35.0% | |
| TGGTATCAAATTTGACGATG+AGG | + | chr6.3:77052854-77052873 | MS.gene51268:CDS | 35.0% | |
| TTAGGCCATATGAGTGAAAA+GGG | + | chr6.3:77053704-77053723 | MS.gene51268:CDS | 35.0% | |
| TTCATATTCACCACCATTGT+CGG | - | chr6.3:77054071-77054090 | None:intergenic | 35.0% | |
| TTCCAAGGTAAACTTTACCA+AGG | - | chr6.3:77053388-77053407 | None:intergenic | 35.0% | |
| TTCTTCAAGAATTATGTCCC+CGG | + | chr6.3:77053359-77053378 | MS.gene51268:intron | 35.0% | |
| TTGTTGCAACTGCAATCAAA+TGG | - | chr6.3:77053655-77053674 | None:intergenic | 35.0% | |
| TTTGATCTCCAATCAGACAT+GGG | + | chr6.3:77054879-77054898 | MS.gene51268:intron | 35.0% | |
| ! | ACTACGATGATTTCTGGATT+TGG | - | chr6.3:77053120-77053139 | None:intergenic | 35.0% |
| ! | ATTTCTGGATTTGGATTGTC+TGG | - | chr6.3:77053111-77053130 | None:intergenic | 35.0% |
| ! | CTCTCACATCTTAGAGTTTT+CGG | + | chr6.3:77054355-77054374 | MS.gene51268:intron | 35.0% |
| ! | CTTTTATCGATGATCACTCT+AGG | + | chr6.3:77053936-77053955 | MS.gene51268:intron | 35.0% |
| ! | TAAGTTGAATGGGTCTGTAT+GGG | + | chr6.3:77053451-77053470 | MS.gene51268:intron | 35.0% |
| ! | TCTGGTATTTTATGCTCCAA+TGG | - | chr6.3:77054307-77054326 | None:intergenic | 35.0% |
| !! | AAGAAGTTTTGCTATGAGCA+CGG | + | chr6.3:77054103-77054122 | MS.gene51268:intron | 35.0% |
| !! | AAGCGGTTAAATGGATTTTG+AGG | + | chr6.3:77055811-77055830 | MS.gene51268:intron | 35.0% |
| !! | AGAAGGCATTTCACAACAAA+TGG | + | chr6.3:77054926-77054945 | MS.gene51268:intron | 35.0% |
| !! | ATTTGATGATGTTCGTGATC+TGG | + | chr6.3:77052968-77052987 | MS.gene51268:CDS | 35.0% |
| !! | GAAGGCATTTCACAACAAAT+GGG | + | chr6.3:77054927-77054946 | MS.gene51268:intron | 35.0% |
| !! | GTTGATGATATGTTAGTAGC+AGG | + | chr6.3:77055390-77055409 | MS.gene51268:intron | 35.0% |
| !! | TTAAGTTGAATGGGTCTGTA+TGG | + | chr6.3:77053450-77053469 | MS.gene51268:intron | 35.0% |
| !!! | TGGATTTTGAGGTATCTAAG+AGG | + | chr6.3:77055822-77055841 | MS.gene51268:intron | 35.0% |
| !!! | TTTTGTTTTCATCATCCCAG+AGG | - | chr6.3:77054486-77054505 | None:intergenic | 35.0% |
| AAACTTTACCAAGGTTACCG+GGG | - | chr6.3:77053379-77053398 | None:intergenic | 40.0% | |
| AAAGGATTCCAGCAGAAAGA+AGG | + | chr6.3:77055009-77055028 | MS.gene51268:intron | 40.0% | |
| AACAGAGTTAGGATTCATGC+AGG | + | chr6.3:77056088-77056107 | MS.gene51268:intron | 40.0% | |
| AACTTCATATACCACTGCCT+TGG | - | chr6.3:77055270-77055289 | None:intergenic | 40.0% | |
| AAGAAAAAGAACTCATGGCC+AGG | + | chr6.3:77055667-77055686 | MS.gene51268:intron | 40.0% | |
| AAGTTGTGCTCAACTTCAGT+TGG | + | chr6.3:77056318-77056337 | MS.gene51268:CDS | 40.0% | |
| AATCGATGAAGGATGATGAG+TGG | + | chr6.3:77052583-77052602 | MS.gene51268:CDS | 40.0% | |
| ACTCGAAATCTATCGAGTGT+TGG | + | chr6.3:77053147-77053166 | MS.gene51268:CDS | 40.0% | |
| AGAGGAAGAAATTCAACCAG+AGG | + | chr6.3:77053062-77053081 | MS.gene51268:CDS | 40.0% | |
| AGCAGGTTTATGTCAAATCC+AGG | + | chr6.3:77055774-77055793 | MS.gene51268:intron | 40.0% | |
| AGCTCAAGTTTCTCCTTCTT+TGG | - | chr6.3:77053851-77053870 | None:intergenic | 40.0% | |
| AGGCTTACCAAAGAACTTCT+GGG | + | chr6.3:77054231-77054250 | MS.gene51268:intron | 40.0% | |
| ATATACATGCACCAACCAGA+AGG | + | chr6.3:77055174-77055193 | MS.gene51268:intron | 40.0% | |
| ATTCTGCCAATTCCTCTGAT+TGG | - | chr6.3:77054654-77054673 | None:intergenic | 40.0% | |
| CAAATCCAGGTAAAGCTCAT+TGG | + | chr6.3:77055787-77055806 | MS.gene51268:intron | 40.0% | |
| CAAATGGGTGTATCGAGTAA+AGG | + | chr6.3:77054942-77054961 | MS.gene51268:intron | 40.0% | |
| CCAGAAGGATTCTCAGAAAA+AGG | + | chr6.3:77055189-77055208 | MS.gene51268:intron | 40.0% | |
| CGCAGATATGTTAACAAAGG+TGG | + | chr6.3:77056278-77056297 | MS.gene51268:CDS | 40.0% | |
| CTCAAGTTTCTCCTTCTTTG+GGG | - | chr6.3:77053849-77053868 | None:intergenic | 40.0% | |
| CTCAGCTACACCATTATGTT+GGG | - | chr6.3:77054161-77054180 | None:intergenic | 40.0% | |
| CTCCAGTTCCTGAATTAAGA+AGG | + | chr6.3:77054713-77054732 | MS.gene51268:CDS | 40.0% | |
| CTCTGTATGCAATACTGAAG+AGG | - | chr6.3:77053039-77053058 | None:intergenic | 40.0% | |
| CTGAGAACTACGATGATTTC+TGG | - | chr6.3:77053126-77053145 | None:intergenic | 40.0% | |
| CTTAATCAACCGAGGTTCAT+CGG | + | chr6.3:77054279-77054298 | MS.gene51268:intron | 40.0% | |
| CTTAATTCAGGAACTGGAGT+AGG | - | chr6.3:77054712-77054731 | None:intergenic | 40.0% | |
| CTTCATCAGATCTCTTCTTG+AGG | + | chr6.3:77056212-77056231 | MS.gene51268:CDS | 40.0% | |
| CTTCCAATTGCTGAAGCATA+TGG | - | chr6.3:77055696-77055715 | None:intergenic | 40.0% | |
| CTTGAAGAAGCAACAATGGT+CGG | - | chr6.3:77055334-77055353 | None:intergenic | 40.0% | |
| CTTGTTCACTCTGATGTTTG+GGG | + | chr6.3:77053869-77053888 | MS.gene51268:intron | 40.0% | |
| CTTTGATCTCCAATCAGACA+TGG | + | chr6.3:77054878-77054897 | MS.gene51268:intron | 40.0% | |
| GAACTAGCTAAGTTACCCAA+GGG | + | chr6.3:77054901-77054920 | MS.gene51268:intron | 40.0% | |
| GACCTTCTTAATTCAGGAAC+TGG | - | chr6.3:77054718-77054737 | None:intergenic | 40.0% | |
| GAGGTGATTGTTCTTGAGAT+AGG | - | chr6.3:77055638-77055657 | None:intergenic | 40.0% | |
| GCGAAAAACTTAATCTCCGT+AGG | + | chr6.3:77053506-77053525 | MS.gene51268:intron | 40.0% | |
| GCTCAAGTTTCTCCTTCTTT+GGG | - | chr6.3:77053850-77053869 | None:intergenic | 40.0% | |
| GCTTGTTCACTCTGATGTTT+GGG | + | chr6.3:77053868-77053887 | MS.gene51268:intron | 40.0% | |
| GGAGCATAAAATACCAGAAG+AGG | + | chr6.3:77054309-77054328 | MS.gene51268:intron | 40.0% | |
| GGAGGAAGAAAAAGAACTCA+TGG | + | chr6.3:77055662-77055681 | MS.gene51268:intron | 40.0% | |
| GGTCAGGCAAAGAAAATTCT+TGG | + | chr6.3:77055480-77055499 | MS.gene51268:intron | 40.0% | |
| GGTTATGGTGAAGATGAGTT+TGG | + | chr6.3:77054454-77054473 | MS.gene51268:intron | 40.0% | |
| GTATTGCATACAGAGTCAAG+AGG | + | chr6.3:77053044-77053063 | MS.gene51268:CDS | 40.0% | |
| GTGAAGACTGCATTTCTTCA+TGG | + | chr6.3:77055135-77055154 | MS.gene51268:intron | 40.0% | |
| GTGTTGGAATTGTGGAAAGA+CGG | + | chr6.3:77053163-77053182 | MS.gene51268:CDS | 40.0% | |
| GTTTGAAAGCTTCATGCACA+AGG | + | chr6.3:77055287-77055306 | MS.gene51268:intron | 40.0% | |
| TAAGTTACCCAAGGGAAAGA+AGG | + | chr6.3:77054909-77054928 | MS.gene51268:intron | 40.0% | |
| TAGGCCATATGAGTGAAAAG+GGG | + | chr6.3:77053705-77053724 | MS.gene51268:CDS | 40.0% | |
| TATGAGTGAAAAGGGGATGA+AGG | + | chr6.3:77053712-77053731 | MS.gene51268:CDS | 40.0% | |
| TCAAGAACAATCACCTCAGA+CGG | + | chr6.3:77055641-77055660 | MS.gene51268:intron | 40.0% | |
| TCAGCTACACCATTATGTTG+GGG | - | chr6.3:77054160-77054179 | None:intergenic | 40.0% | |
| TCAGCTTACTTAATCAACCG+AGG | + | chr6.3:77054271-77054290 | MS.gene51268:intron | 40.0% | |
| TCCCGCAGATATGTTAACAA+AGG | + | chr6.3:77056275-77056294 | MS.gene51268:CDS | 40.0% | |
| TGAAATGCCTTCTTTCCCTT+GGG | - | chr6.3:77054919-77054938 | None:intergenic | 40.0% | |
| TGACATGAAGGATTTAGGTC+AGG | + | chr6.3:77055464-77055483 | MS.gene51268:intron | 40.0% | |
| TGGAAGTTTGATGTACGCAA+TGG | + | chr6.3:77055710-77055729 | MS.gene51268:intron | 40.0% | |
| TGGTGAAGCTCAATACTATC+AGG | + | chr6.3:77055061-77055080 | MS.gene51268:intron | 40.0% | |
| TGTATCTCTTAGAGCCATCA+TGG | - | chr6.3:77054972-77054991 | None:intergenic | 40.0% | |
| TGTTGGAATTGTGGAAAGAC+GGG | + | chr6.3:77053164-77053183 | MS.gene51268:CDS | 40.0% | |
| TTCTGCCAATTCCTCTGATT+GGG | - | chr6.3:77054653-77054672 | None:intergenic | 40.0% | |
| TTTACACTTCGGATGACAGA+AGG | + | chr6.3:77052771-77052790 | MS.gene51268:CDS | 40.0% | |
| TTTCAAGAGATGGAAAGCCA+TGG | + | chr6.3:77054006-77054025 | MS.gene51268:intron | 40.0% | |
| ! | AAGTGCACTTTCATCGGTTA+TGG | + | chr6.3:77054439-77054458 | MS.gene51268:intron | 40.0% |
| ! | ACTTGTCTCATTTTCCACCA+TGG | - | chr6.3:77054026-77054045 | None:intergenic | 40.0% |
| ! | AGCTTGTTCACTCTGATGTT+TGG | + | chr6.3:77053867-77053886 | MS.gene51268:intron | 40.0% |
| ! | ATAGTATTGAGCTTCACCAC+TGG | - | chr6.3:77055060-77055079 | None:intergenic | 40.0% |
| ! | ATGATCACTCTAGGAAGGTA+TGG | + | chr6.3:77053945-77053964 | MS.gene51268:intron | 40.0% |
| ! | ATTAAGTTTTTCGCGAGGTC+GGG | - | chr6.3:77053500-77053519 | None:intergenic | 40.0% |
| ! | CTCAAGATAGAGATTTTCGC+TGG | - | chr6.3:77055106-77055125 | None:intergenic | 40.0% |
| ! | GAAAGTGCACTTCTTGGATT+TGG | - | chr6.3:77054431-77054450 | None:intergenic | 40.0% |
| ! | GATATGTTCTTTGGAGAGCA+CGG | + | chr6.3:77053280-77053299 | MS.gene51268:intron | 40.0% |
| ! | GATTAAGTTTTTCGCGAGGT+CGG | - | chr6.3:77053501-77053520 | None:intergenic | 40.0% |
| ! | TATCGATGATCACTCTAGGA+AGG | + | chr6.3:77053940-77053959 | MS.gene51268:intron | 40.0% |
| ! | TCATCCCCTTTTCACTCATA+TGG | - | chr6.3:77053712-77053731 | None:intergenic | 40.0% |
| ! | TCCAAGAAGTGCACTTTCAT+CGG | + | chr6.3:77054433-77054452 | MS.gene51268:intron | 40.0% |
| ! | TGACGCGTTGATATGTTCTT+TGG | + | chr6.3:77053271-77053290 | MS.gene51268:intron | 40.0% |
| ! | TGATCACTCTAGGAAGGTAT+GGG | + | chr6.3:77053946-77053965 | MS.gene51268:intron | 40.0% |
| ! | TTTCATCTTTTTGCTTCCCG+AGG | - | chr6.3:77052949-77052968 | None:intergenic | 40.0% |
| ! | TTTCTGAGAATCCTTCTGGT+TGG | - | chr6.3:77055188-77055207 | None:intergenic | 40.0% |
| !! | AGAAGTTTTGCTATGAGCAC+GGG | + | chr6.3:77054104-77054123 | MS.gene51268:intron | 40.0% |
| !! | CCTTTTTCTGAGAATCCTTC+TGG | - | chr6.3:77055192-77055211 | None:intergenic | 40.0% |
| !! | TCATCATCCTTCATCGATTC+TGG | - | chr6.3:77052582-77052601 | None:intergenic | 40.0% |
| !! | TCTATCGAGTGTTGGAATTG+TGG | + | chr6.3:77053155-77053174 | MS.gene51268:CDS | 40.0% |
| !! | TCTGGTTTCTTTTCTGTGAG+AGG | - | chr6.3:77052564-77052583 | None:intergenic | 40.0% |
| AAATCTTCCAGTCATCACCG+TGG | - | chr6.3:77053565-77053584 | None:intergenic | 45.0% | |
| AAGAGCCTTCATAAGACCAG+CGG | - | chr6.3:77052694-77052713 | None:intergenic | 45.0% | |
| AAGCTTAGAACCGACAATGG+TGG | + | chr6.3:77054058-77054077 | MS.gene51268:intron | 45.0% | |
| AAGTGGAAGAACCCCAAAGA+AGG | + | chr6.3:77053835-77053854 | MS.gene51268:intron | 45.0% | |
| AATGCTTCCCACCAATGGAT+GGG | - | chr6.3:77053907-77053926 | None:intergenic | 45.0% | |
| AATTATGTCCCCGGTAACCT+TGG | + | chr6.3:77053368-77053387 | MS.gene51268:intron | 45.0% | |
| ACAGTAGCACTCCAACTATC+TGG | - | chr6.3:77052909-77052928 | None:intergenic | 45.0% | |
| AGAATGGAATGAACTGTGCC+AGG | + | chr6.3:77054130-77054149 | MS.gene51268:intron | 45.0% | |
| AGAGTCAGCTTTCAGACAAG+TGG | + | chr6.3:77053818-77053837 | MS.gene51268:intron | 45.0% | |
| AGATGAGATTCCCCAATCAG+AGG | + | chr6.3:77054639-77054658 | MS.gene51268:CDS | 45.0% | |
| AGCACTCCAACTATCTGGTA+GGG | - | chr6.3:77052904-77052923 | None:intergenic | 45.0% | |
| AGCTAGTTCCCATGTCTGAT+TGG | - | chr6.3:77054890-77054909 | None:intergenic | 45.0% | |
| AGGTAAAGCTCATTGGGAAG+CGG | + | chr6.3:77055794-77055813 | MS.gene51268:intron | 45.0% | |
| ATGCAGTGGGAGTTATTAGC+AGG | + | chr6.3:77055757-77055776 | MS.gene51268:intron | 45.0% | |
| ATGGGTGTATCGAGTAAAGG+AGG | + | chr6.3:77054945-77054964 | MS.gene51268:intron | 45.0% | |
| CAAATCAGTTAGCACACCGT+TGG | + | chr6.3:77055599-77055618 | MS.gene51268:intron | 45.0% | |
| CAACGGTGTGCTAACTGATT+TGG | - | chr6.3:77055601-77055620 | None:intergenic | 45.0% | |
| CAAGTGCTTGTCTATCGAGA+AGG | - | chr6.3:77052611-77052630 | None:intergenic | 45.0% | |
| CACCACTGGAGCAAAAATCT+CGG | - | chr6.3:77055046-77055065 | None:intergenic | 45.0% | |
| CAGATCTCTTCTTGAGGATG+AGG | + | chr6.3:77056218-77056237 | MS.gene51268:CDS | 45.0% | |
| CAGGCTTACCAAAGAACTTC+TGG | + | chr6.3:77054230-77054249 | MS.gene51268:intron | 45.0% | |
| CGAGCCTGTTTATGTAGAGA+TGG | + | chr6.3:77054594-77054613 | MS.gene51268:CDS | 45.0% | |
| CTCATTGGGAAGCGGTTAAA+TGG | + | chr6.3:77055802-77055821 | MS.gene51268:intron | 45.0% | |
| CTTCTCGATAGACAAGCACT+TGG | + | chr6.3:77052609-77052628 | MS.gene51268:CDS | 45.0% | |
| GAAAGCTTCATGCACAAGGA+AGG | + | chr6.3:77055291-77055310 | MS.gene51268:intron | 45.0% | |
| GAAGTAATGCTTCCCACCAA+TGG | - | chr6.3:77053912-77053931 | None:intergenic | 45.0% | |
| GAATCAAGAGGCGAAAGATG+AGG | + | chr6.3:77053220-77053239 | MS.gene51268:CDS | 45.0% | |
| GAATCCTTTGACCACTAGTC+GGG | - | chr6.3:77054998-77055017 | None:intergenic | 45.0% | |
| GATTCCCCAATCAGAGGAAT+TGG | + | chr6.3:77054645-77054664 | MS.gene51268:CDS | 45.0% | |
| GATTGGGGAATCTCATCTGT+GGG | - | chr6.3:77054637-77054656 | None:intergenic | 45.0% | |
| GCTCAGCTACACCATTATGT+TGG | - | chr6.3:77054162-77054181 | None:intergenic | 45.0% | |
| GGAAAGAGAATATGGTGTGC+AGG | + | chr6.3:77055211-77055230 | MS.gene51268:intron | 45.0% | |
| GGAACTAGCTAAGTTACCCA+AGG | + | chr6.3:77054900-77054919 | MS.gene51268:intron | 45.0% | |
| GGAATCCTTTGACCACTAGT+CGG | - | chr6.3:77054999-77055018 | None:intergenic | 45.0% | |
| GGTACTCTTTACAAGACAGC+TGG | + | chr6.3:77053623-77053642 | MS.gene51268:CDS | 45.0% | |
| GTAGAGATGGATGATGTTCC+AGG | + | chr6.3:77054607-77054626 | MS.gene51268:CDS | 45.0% | |
| GTGAAATGCCTTCTTTCCCT+TGG | - | chr6.3:77054920-77054939 | None:intergenic | 45.0% | |
| TAATGCTTCCCACCAATGGA+TGG | - | chr6.3:77053908-77053927 | None:intergenic | 45.0% | |
| TACATACTCAGCCTCTGTAG+TGG | - | chr6.3:77056021-77056040 | None:intergenic | 45.0% | |
| TACGTAGATGCAGACTTTGC+TGG | + | chr6.3:77055897-77055916 | MS.gene51268:intron | 45.0% | |
| TACTCAGTGAAGAGATCCGA+CGG | + | chr6.3:77052991-77053010 | MS.gene51268:CDS | 45.0% | |
| TAGCACTCCAACTATCTGGT+AGG | - | chr6.3:77052905-77052924 | None:intergenic | 45.0% | |
| TAGCAGGCTCAGACATTGAT+GGG | + | chr6.3:77055406-77055425 | MS.gene51268:intron | 45.0% | |
| TAGTCAGAGTGCGATACATC+TGG | + | chr6.3:77056133-77056152 | MS.gene51268:intron | 45.0% | |
| TCGCCTCTTGATTCTTTGCT+GGG | - | chr6.3:77053214-77053233 | None:intergenic | 45.0% | |
| TCTGCCAATTCCTCTGATTG+GGG | - | chr6.3:77054652-77054671 | None:intergenic | 45.0% | |
| TCTTGTAAGGTTGTGGGCAA+AGG | + | chr6.3:77053416-77053435 | MS.gene51268:intron | 45.0% | |
| TGAGGCGGTTGTTTACACTT+CGG | + | chr6.3:77052760-77052779 | MS.gene51268:CDS | 45.0% | |
| TGATGAAGCATGTCAGACCA+CGG | + | chr6.3:77054813-77054832 | MS.gene51268:CDS | 45.0% | |
| TGATTGGGGAATCTCATCTG+TGG | - | chr6.3:77054638-77054657 | None:intergenic | 45.0% | |
| TGCTGAAGCATATGGAATCC+TGG | - | chr6.3:77055688-77055707 | None:intergenic | 45.0% | |
| TGTCTTCCCTACCAGATAGT+TGG | + | chr6.3:77052895-77052914 | MS.gene51268:CDS | 45.0% | |
| TTCGCCTCTTGATTCTTTGC+TGG | - | chr6.3:77053215-77053234 | None:intergenic | 45.0% | |
| TTTACCACGTCCATTTCCTC+TGG | - | chr6.3:77053081-77053100 | None:intergenic | 45.0% | |
| TTTCCACTCCATACCTCTTC+TGG | - | chr6.3:77054325-77054344 | None:intergenic | 45.0% | |
| ! | ACCGATGAAAGTGCACTTCT+TGG | - | chr6.3:77054437-77054456 | None:intergenic | 45.0% |
| ! | AGAGGTATGGAGTGGAAAAG+AGG | + | chr6.3:77054327-77054346 | MS.gene51268:intron | 45.0% |
| ! | AGGCGAAAATGACTTGCCAA+CGG | - | chr6.3:77055618-77055637 | None:intergenic | 45.0% |
| ! | ATACCAGAAGAGGTATGGAG+TGG | + | chr6.3:77054319-77054338 | MS.gene51268:intron | 45.0% |
| ! | CGGAGATTAAGTTTTTCGCG+AGG | - | chr6.3:77053505-77053524 | None:intergenic | 45.0% |
| ! | GATCACCGAAGAAGTACAAC+TGG | + | chr6.3:77055927-77055946 | MS.gene51268:intron | 45.0% |
| ! | TCTTTTTCTTCCTCCGTCTG+AGG | - | chr6.3:77055657-77055676 | None:intergenic | 45.0% |
| ! | TGTTTTCATCATCCCAGAGG+CGG | - | chr6.3:77054483-77054502 | None:intergenic | 45.0% |
| ! | TTGGTACTGGAGCAGTTAGT+TGG | + | chr6.3:77055964-77055983 | MS.gene51268:intron | 45.0% |
| !! | TGTCGCTTTATCCACTACAG+AGG | + | chr6.3:77056007-77056026 | MS.gene51268:intron | 45.0% |
| AAAGCCCGACTAGTGGTCAA+AGG | + | chr6.3:77054991-77055010 | MS.gene51268:intron | 50.0% | |
| AACACAACCACCAACGACTC+AGG | + | chr6.3:77054565-77054584 | MS.gene51268:intron | 50.0% | |
| AAGTTCGATGGTGCGGACTT+TGG | + | chr6.3:77052486-77052505 | MS.gene51268:CDS | 50.0% | |
| AATGGTCGGCATTGCACTTC+TGG | - | chr6.3:77055320-77055339 | None:intergenic | 50.0% | |
| ACAACTGTCCCATCCATTGG+TGG | + | chr6.3:77053896-77053915 | MS.gene51268:intron | 50.0% | |
| ACTCTTTCTACCGCGAGCTA+TGG | - | chr6.3:77053603-77053622 | None:intergenic | 50.0% | |
| AGAACAATCACCTCAGACGG+AGG | + | chr6.3:77055644-77055663 | MS.gene51268:intron | 50.0% | |
| AGACCACGGATGCTAGTAAG+TGG | + | chr6.3:77054827-77054846 | MS.gene51268:intron | 50.0% | |
| AGAGTGCGATACATCTGGCA+AGG | + | chr6.3:77056138-77056157 | MS.gene51268:intron | 50.0% | |
| ATAGCTCGCGGTAGAAAGAG+TGG | + | chr6.3:77053602-77053621 | MS.gene51268:CDS | 50.0% | |
| ATCTCATCTGTGGGACTTCC+TGG | - | chr6.3:77054628-77054647 | None:intergenic | 50.0% | |
| ATGGCCTGAAACAAGCTCCA+AGG | + | chr6.3:77055250-77055269 | MS.gene51268:intron | 50.0% | |
| ATTCACCCAACTCTCTCCGT+CGG | - | chr6.3:77053010-77053029 | None:intergenic | 50.0% | |
| CAACTGTCCCATCCATTGGT+GGG | + | chr6.3:77053897-77053916 | MS.gene51268:intron | 50.0% | |
| CAAGAGATGGAAAGCCATGG+TGG | + | chr6.3:77054009-77054028 | MS.gene51268:intron | 50.0% | |
| CCAACAACTGTCCCATCCAT+TGG | + | chr6.3:77053893-77053912 | MS.gene51268:intron | 50.0% | |
| CCAATGGATGGGACAGTTGT+TGG | - | chr6.3:77053896-77053915 | None:intergenic | 50.0% | |
| CCAGACATTGGTCATGCAGT+GGG | + | chr6.3:77055744-77055763 | MS.gene51268:intron | 50.0% | |
| CGAGTAAAGGAGGACCATGA+TGG | + | chr6.3:77054955-77054974 | MS.gene51268:intron | 50.0% | |
| CTATGAGCACGGGATCAGAA+TGG | + | chr6.3:77054114-77054133 | MS.gene51268:intron | 50.0% | |
| CTTAATCTCCGTAGGCCAGT+TGG | + | chr6.3:77053514-77053533 | MS.gene51268:intron | 50.0% | |
| GACCACGGATGCTAGTAAGT+GGG | + | chr6.3:77054828-77054847 | MS.gene51268:intron | 50.0% | |
| GAGATACAAAGCCCGACTAG+TGG | + | chr6.3:77054984-77055003 | MS.gene51268:intron | 50.0% | |
| GAGTCTTGGGTGTTAGACTC+TGG | + | chr6.3:77053305-77053324 | MS.gene51268:intron | 50.0% | |
| GCAAAAGAGAAAACCACCGC+TGG | + | chr6.3:77052675-77052694 | MS.gene51268:CDS | 50.0% | |
| GCTCCCAGCAAAGAATCAAG+AGG | + | chr6.3:77053208-77053227 | MS.gene51268:CDS | 50.0% | |
| GCTTCCCAATGAGCTTTACC+TGG | - | chr6.3:77055795-77055814 | None:intergenic | 50.0% | |
| GCTTCTGCCCAGAAGTTCTT+TGG | - | chr6.3:77054241-77054260 | None:intergenic | 50.0% | |
| GGCTACACAACAGTCTTCCA+CGG | + | chr6.3:77053545-77053564 | MS.gene51268:CDS | 50.0% | |
| GTAGCAGGCTCAGACATTGA+TGG | + | chr6.3:77055405-77055424 | MS.gene51268:intron | 50.0% | |
| TCAACCAGAGGAAATGGACG+TGG | + | chr6.3:77053074-77053093 | MS.gene51268:CDS | 50.0% | |
| TGAAACAAGCTCCAAGGCAG+TGG | + | chr6.3:77055256-77055275 | MS.gene51268:intron | 50.0% | |
| TGTACGCAATGGTCTGTACG+AGG | + | chr6.3:77055721-77055740 | MS.gene51268:intron | 50.0% | |
| ! | ACTGCCTTGGAGCTTGTTTC+AGG | - | chr6.3:77055257-77055276 | None:intergenic | 50.0% |
| ! | CACCGAGATTTTTGCTCCAG+TGG | + | chr6.3:77055041-77055060 | MS.gene51268:intron | 50.0% |
| ! | GCAAATGTTGCTTCCACCTC+AGG | + | chr6.3:77053242-77053261 | MS.gene51268:CDS | 50.0% |
| !! | AACCACCGCTGGTCTTATGA+AGG | + | chr6.3:77052686-77052705 | MS.gene51268:CDS | 50.0% |
| !!! | ATGGTGCGGACTTTGGCTTT+TGG | + | chr6.3:77052493-77052512 | MS.gene51268:CDS | 50.0% |
| ACAGCTGTGAGTAGCTCCTC+GGG | + | chr6.3:77052930-77052949 | MS.gene51268:CDS | 55.0% | |
| AGAAGCTTGCGTGTGCAGTC+AGG | + | chr6.3:77054211-77054230 | MS.gene51268:intron | 55.0% | |
| AGAGATCCGACGGAGAGAGT+TGG | + | chr6.3:77053001-77053020 | MS.gene51268:CDS | 55.0% | |
| AGCCTTCATAAGACCAGCGG+TGG | - | chr6.3:77052691-77052710 | None:intergenic | 55.0% | |
| ATGAGTTTGGCTACCGCCTC+TGG | + | chr6.3:77054467-77054486 | MS.gene51268:intron | 55.0% | |
| CACAGCTGTGAGTAGCTCCT+CGG | + | chr6.3:77052929-77052948 | MS.gene51268:CDS | 55.0% | |
| CAGTCTTCCACGGTGATGAC+TGG | + | chr6.3:77053555-77053574 | MS.gene51268:CDS | 55.0% | |
| CCAGGCACTCCCCAACATAA+TGG | + | chr6.3:77054148-77054167 | MS.gene51268:intron | 55.0% | |
| CCCACTGCATGACCAATGTC+TGG | - | chr6.3:77055747-77055766 | None:intergenic | 55.0% | |
| CTCCCACTTACTAGCATCCG+TGG | - | chr6.3:77054833-77054852 | None:intergenic | 55.0% | |
| CTCGCTCAATCCTGAGTCGT+TGG | - | chr6.3:77054578-77054597 | None:intergenic | 55.0% | |
| GAGATCCGACGGAGAGAGTT+GGG | + | chr6.3:77053002-77053021 | MS.gene51268:CDS | 55.0% | |
| GCCAGACATTGGTCATGCAG+TGG | + | chr6.3:77055743-77055762 | MS.gene51268:intron | 55.0% | |
| GCTCAATCCTGAGTCGTTGG+TGG | - | chr6.3:77054575-77054594 | None:intergenic | 55.0% | |
| GGAACTGGAGTAGGATGCAC+TGG | - | chr6.3:77054703-77054722 | None:intergenic | 55.0% | |
| GGTGCAATGACCATAGCTCG+CGG | + | chr6.3:77053590-77053609 | MS.gene51268:CDS | 55.0% | |
| GTCTGTACGAGGCCAGACAT+TGG | + | chr6.3:77055732-77055751 | MS.gene51268:intron | 55.0% | |
| GTTGCTTCCACCTCAGGAGA+AGG | + | chr6.3:77053248-77053267 | MS.gene51268:CDS | 55.0% | |
| TGACTGCACACGCAAGCTTC+TGG | - | chr6.3:77054212-77054231 | None:intergenic | 55.0% | |
| TGAGTTTGGCTACCGCCTCT+GGG | + | chr6.3:77054468-77054487 | MS.gene51268:intron | 55.0% | |
| TGTAGCCTTCGTCAGCCAAC+TGG | - | chr6.3:77053532-77053551 | None:intergenic | 55.0% | |
| ! | GATGACAGAAGGCGCATCAG+TGG | + | chr6.3:77052782-77052801 | MS.gene51268:CDS | 55.0% |
| ! | GGAGAGCACGGAAGAGTCTT+GGG | + | chr6.3:77053292-77053311 | MS.gene51268:intron | 55.0% |
| ! | GGATGCACTGGTGTGTCAGA+CGG | - | chr6.3:77054691-77054710 | None:intergenic | 55.0% |
| ! | TGGAGAGCACGGAAGAGTCT+TGG | + | chr6.3:77053291-77053310 | MS.gene51268:intron | 55.0% |
| ! | TTCGTCAGCCAACTGGCCTA+CGG | - | chr6.3:77053525-77053544 | None:intergenic | 55.0% |
| !! | CCAATGGCACCGATGAACCT+CGG | - | chr6.3:77054291-77054310 | None:intergenic | 55.0% |
| !! | CCATTATGTTGGGGAGTGCC+TGG | - | chr6.3:77054151-77054170 | None:intergenic | 55.0% |
| CAACGCGTCACCTTCTCCTG+AGG | - | chr6.3:77053261-77053280 | None:intergenic | 60.0% | |
| GTAGGCCAGTTGGCTGACGA+AGG | + | chr6.3:77053524-77053543 | MS.gene51268:intron | 60.0% | |
| !! | CCGAGGTTCATCGGTGCCAT+TGG | + | chr6.3:77054288-77054307 | MS.gene51268:intron | 60.0% |
| CGCGTCACCTTCTCCTGAGG+TGG | - | chr6.3:77053258-77053277 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 77052453 | 77056353 | 77052453 | ID=MS.gene51268 |
| chr6.3 | mRNA | 77052453 | 77056353 | 77052453 | ID=MS.gene51268.t1;Parent=MS.gene51268 |
| chr6.3 | exon | 77052453 | 77053269 | 77052453 | ID=MS.gene51268.t1.exon1;Parent=MS.gene51268.t1 |
| chr6.3 | CDS | 77052453 | 77053269 | 77052453 | ID=cds.MS.gene51268.t1;Parent=MS.gene51268.t1 |
| chr6.3 | exon | 77053528 | 77053836 | 77053528 | ID=MS.gene51268.t1.exon2;Parent=MS.gene51268.t1 |
| chr6.3 | CDS | 77053528 | 77053836 | 77053528 | ID=cds.MS.gene51268.t1;Parent=MS.gene51268.t1 |
| chr6.3 | exon | 77054587 | 77054841 | 77054587 | ID=MS.gene51268.t1.exon3;Parent=MS.gene51268.t1 |
| chr6.3 | CDS | 77054587 | 77054841 | 77054587 | ID=cds.MS.gene51268.t1;Parent=MS.gene51268.t1 |
| chr6.3 | exon | 77056199 | 77056353 | 77056199 | ID=MS.gene51268.t1.exon4;Parent=MS.gene51268.t1 |
| chr6.3 | CDS | 77056199 | 77056353 | 77056199 | ID=cds.MS.gene51268.t1;Parent=MS.gene51268.t1 |
| Gene Sequence |
| Protein sequence |
