Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51469.t1 | RHN65285.1 | 96.1 | 640 | 18 | 1 | 1 | 633 | 1 | 640 | 0.00E+00 | 1225.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51469.t1 | O23627 | 84.6 | 624 | 96 | 0 | 10 | 633 | 106 | 729 | 0.0e+00 | 1087.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51469.t1 | A0A396IN48 | 96.1 | 640 | 18 | 1 | 1 | 633 | 1 | 640 | 0.0e+00 | 1225.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05081 | MS.gene51469 | 0.804787 | 1.83E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene51469 | 0.803498 | 3.39E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51469.t1 | MTR_3g006730 | 95.938 | 640 | 19 | 1 | 1 | 633 | 1 | 640 | 0.0 | 1273 |
| MS.gene51469.t1 | MTR_7g406850 | 93.968 | 630 | 37 | 1 | 5 | 633 | 57 | 686 | 0.0 | 1239 |
| MS.gene51469.t1 | MTR_3g006730 | 95.548 | 629 | 21 | 1 | 1 | 622 | 1 | 629 | 0.0 | 1236 |
| MS.gene51469.t1 | MTR_3g006740 | 91.042 | 614 | 55 | 0 | 6 | 619 | 61 | 674 | 0.0 | 1168 |
| MS.gene51469.t1 | MTR_1g112350 | 77.586 | 58 | 10 | 2 | 24 | 81 | 128 | 182 | 1.48e-20 | 92.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51469.t1 | AT1G29880 | 84.951 | 618 | 93 | 0 | 16 | 633 | 112 | 729 | 0.0 | 1108 |
| MS.gene51469.t1 | AT1G29870 | 68.796 | 407 | 123 | 4 | 17 | 421 | 57 | 461 | 0.0 | 554 |
| MS.gene51469.t1 | AT3G44740 | 66.667 | 177 | 58 | 1 | 199 | 374 | 54 | 230 | 5.78e-76 | 243 |
| MS.gene51469.t1 | AT3G44740 | 66.667 | 177 | 58 | 1 | 199 | 374 | 54 | 230 | 5.78e-76 | 243 |
| MS.gene51469.t1 | AT3G44740 | 66.667 | 177 | 58 | 1 | 199 | 374 | 54 | 230 | 5.78e-76 | 243 |
| MS.gene51469.t1 | AT3G44740 | 66.667 | 177 | 58 | 1 | 199 | 374 | 54 | 230 | 5.78e-76 | 243 |
| MS.gene51469.t1 | AT3G44740 | 66.667 | 177 | 58 | 1 | 199 | 374 | 24 | 200 | 1.13e-75 | 241 |
Find 162 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTAATGTTCTCTCTTTC+TGG | 0.121391 | 3.4:-2205800 | MS.gene51469:CDS |
| GTTACTGGTCTTTATGATTA+TGG | 0.199314 | 3.4:-2205843 | MS.gene51469:CDS |
| AATATGCCCTGTGCAGTTTC+TGG | 0.199332 | 3.4:+2203322 | None:intergenic |
| CCCTTTGCTGCTGCACAAAT+TGG | 0.207499 | 3.4:-2203256 | MS.gene51469:CDS |
| GAGAGTGGGTTCTTAGTTTC+AGG | 0.220285 | 3.4:+2204593 | None:intergenic |
| CAACGACTTAGAAATTAATT+TGG | 0.221290 | 3.4:+2201377 | None:intergenic |
| TGGCAACCTCTTCAAACTTC+TGG | 0.255552 | 3.4:+2201397 | None:intergenic |
| AAAATTTACCGCGGTGTTAC+TGG | 0.275670 | 3.4:-2205858 | MS.gene51469:CDS |
| GGTCCCTCCGGCTTAGCTCC+TGG | 0.305161 | 3.4:-2204530 | MS.gene51469:CDS |
| ACAAAGACCGCTTGAGATTT+AGG | 0.321980 | 3.4:-2202754 | MS.gene51469:CDS |
| GAGACTCTTGGTTATTTCAT+TGG | 0.324602 | 3.4:-2202812 | MS.gene51469:CDS |
| AGGCCCAATTCTTTCTTGAT+AGG | 0.327044 | 3.4:+2201884 | None:intergenic |
| TATAGAAAGTGTGCTCAAAT+AGG | 0.333745 | 3.4:+2201517 | None:intergenic |
| AACTCCTATCAAGAAAGAAT+TGG | 0.345942 | 3.4:-2201888 | MS.gene51469:CDS |
| AGAACTTGGTGCTAAGATTA+AGG | 0.349556 | 3.4:-2204633 | MS.gene51469:CDS |
| AGAAAGCTGTCTCTGTTATT+CGG | 0.349574 | 3.4:-2200755 | MS.gene51469:CDS |
| TCGCATAAGATCGACATTAC+AGG | 0.356984 | 3.4:-2201339 | MS.gene51469:intron |
| CCCAACAGTCAGCGGCATAA+TGG | 0.361210 | 3.4:+2202708 | None:intergenic |
| GAATCTCTCCGTTCCGCTTC+CGG | 0.362389 | 3.4:-2205957 | MS.gene51469:CDS |
| AGATTCTTCGTTGGTGGCCA+TGG | 0.375548 | 3.4:+2205974 | None:intergenic |
| TTAGGATGAGACTTATCTTC+AGG | 0.378254 | 3.4:+2203057 | None:intergenic |
| ATCAGCACGGTAACATGTTC+CGG | 0.382854 | 3.4:+2204769 | None:intergenic |
| CTGTGATTGAACCATCCTTT+GGG | 0.388442 | 3.4:-2201560 | MS.gene51469:CDS |
| AGACTCTTGGTTATTTCATT+GGG | 0.390147 | 3.4:-2202811 | MS.gene51469:CDS |
| GAGGTTGTTCTAAAATCTTC+CGG | 0.391644 | 3.4:-2204836 | MS.gene51469:CDS |
| GAAAGCTGTCTCTGTTATTC+GGG | 0.396057 | 3.4:-2200754 | MS.gene51469:CDS |
| CAACAACTTCAGTGACTATC+CGG | 0.397131 | 3.4:-2200815 | MS.gene51469:CDS |
| TTCCCATGTCCTCTGGCCTT+CGG | 0.397578 | 3.4:+2200725 | None:intergenic |
| TCTAAGTCGTTGACTGCTGC+TGG | 0.398837 | 3.4:-2201366 | MS.gene51469:CDS |
| ACGGAATGCTTCACGAGAAT+CGG | 0.402590 | 3.4:+2205932 | None:intergenic |
| CTTTATGATTATGGTCCTCC+TGG | 0.408396 | 3.4:-2205834 | MS.gene51469:CDS |
| TGTTCTCTCTTTCTGGCGTC+AGG | 0.411088 | 3.4:-2205793 | MS.gene51469:intron |
| ATGTTACCAGGTACATCAAT+AGG | 0.411180 | 3.4:-2200894 | MS.gene51469:intron |
| CAAACACGTGCTTGCCATGC+TGG | 0.412864 | 3.4:-2204672 | MS.gene51469:CDS |
| GTCCCTCCGGCTTAGCTCCT+GGG | 0.416555 | 3.4:-2204529 | MS.gene51469:intron |
| GGTGCTAAGATTAAGGAGTA+TGG | 0.424159 | 3.4:-2204626 | MS.gene51469:CDS |
| GACTCTGAGAAGGCCTTGAC+GGG | 0.424255 | 3.4:+2203119 | None:intergenic |
| CCCATTATGCCGCTGACTGT+TGG | 0.424448 | 3.4:-2202709 | MS.gene51469:CDS |
| TGCTGCTGCACAAATTGGAC+AGG | 0.430037 | 3.4:-2203251 | MS.gene51469:CDS |
| AACAGTACCTCCACTTCCTT+AGG | 0.432097 | 3.4:+2202019 | None:intergenic |
| TCCAATTTGTGCAGCAGCAA+AGG | 0.432922 | 3.4:+2203255 | None:intergenic |
| TCTGTGATTGAACCATCCTT+TGG | 0.435349 | 3.4:-2201561 | MS.gene51469:CDS |
| CCATTATGCCGCTGACTGTT+GGG | 0.437763 | 3.4:-2202708 | MS.gene51469:CDS |
| CCAACAGTCAGCGGCATAAT+GGG | 0.440813 | 3.4:+2202709 | None:intergenic |
| GTATGCCGAAGTTGCTGACT+TGG | 0.446925 | 3.4:-2203034 | MS.gene51469:CDS |
| GGCATAATGGGCCATCTCAT+TGG | 0.454040 | 3.4:+2202721 | None:intergenic |
| TATACAAGGCAGAGTAAAGC+TGG | 0.454423 | 3.4:-2201498 | MS.gene51469:CDS |
| ACTCCTATCAAGAAAGAATT+GGG | 0.455882 | 3.4:-2201887 | MS.gene51469:CDS |
| GATTTCTCATCTCAAGAACT+TGG | 0.459671 | 3.4:-2204647 | MS.gene51469:CDS |
| ACACATCTTCCCATGTCCTC+TGG | 0.461152 | 3.4:+2200718 | None:intergenic |
| CCAGACATCTGTTCCTCCCT+CGG | 0.468120 | 3.4:+2202997 | None:intergenic |
| AAAGACTTGTACTATTACAA+TGG | 0.468580 | 3.4:-2203289 | MS.gene51469:CDS |
| TAACCGAAGGCCAGAGGACA+TGG | 0.469386 | 3.4:-2200728 | MS.gene51469:CDS |
| TAGGATGAGACTTATCTTCA+GGG | 0.471111 | 3.4:+2203058 | None:intergenic |
| ATTGAACCATCCTTTGGGAT+TGG | 0.476205 | 3.4:-2201555 | MS.gene51469:CDS |
| CAAACTTCCATCGGTCCCTC+CGG | 0.477214 | 3.4:-2204542 | MS.gene51469:CDS |
| GGACTCTGAGAAGGCCTTGA+CGG | 0.478802 | 3.4:+2203118 | None:intergenic |
| GCTGAGATTGAGTGCTCCTA+TGG | 0.479916 | 3.4:-2202683 | MS.gene51469:CDS |
| AACATCAAATTGAAAGGGTA+AGG | 0.489118 | 3.4:+2204566 | None:intergenic |
| ATTGTCAATAATGAGACTCT+TGG | 0.492145 | 3.4:-2202824 | MS.gene51469:CDS |
| TTGCAATGAGAAGCTTCAAA+AGG | 0.500239 | 3.4:-2204729 | MS.gene51469:CDS |
| GATCCTTGCTGTCCCTCTCC+CGG | 0.504265 | 3.4:+2200796 | None:intergenic |
| GATTCTTCGTTGGTGGCCAT+GGG | 0.505042 | 3.4:+2205975 | None:intergenic |
| GAATCCACAGTGACAGCAAA+GGG | 0.506212 | 3.4:+2200837 | None:intergenic |
| ATTGGATATGAAGGCCGCTC+TGG | 0.506231 | 3.4:-2201703 | MS.gene51469:CDS |
| CCAATTTGTGCAGCAGCAAA+GGG | 0.506328 | 3.4:+2203256 | None:intergenic |
| ATGTGATTTGCGTGCTCACT+CGG | 0.507987 | 3.4:-2202624 | MS.gene51469:intron |
| GTTTGAAACATCAAATTGAA+AGG | 0.508850 | 3.4:+2204560 | None:intergenic |
| AACCATCCTTTGGGATTGGA+CGG | 0.512685 | 3.4:-2201551 | MS.gene51469:CDS |
| TCAGCAACTTCGGCATACTT+AGG | 0.513180 | 3.4:+2203039 | None:intergenic |
| GAAAGAAGCATTGGATATGA+AGG | 0.515600 | 3.4:-2201712 | MS.gene51469:CDS |
| TTTGAAACATCAAATTGAAA+GGG | 0.516401 | 3.4:+2204561 | None:intergenic |
| GTGTATTAACAACGGATTGA+CGG | 0.516456 | 3.4:+2205913 | None:intergenic |
| ACGAGAATCGGAGCCGGAAG+CGG | 0.518339 | 3.4:+2205944 | None:intergenic |
| ACGGAGAGATTCTTCGTTGG+TGG | 0.518469 | 3.4:+2205968 | None:intergenic |
| AGCTAAGCCGGAGGGACCGA+TGG | 0.523634 | 3.4:+2204535 | None:intergenic |
| AAAGGGTAAGGATCAGAGAG+TGG | 0.525813 | 3.4:+2204578 | None:intergenic |
| CCGAGGGAGGAACAGATGTC+TGG | 0.526367 | 3.4:-2202997 | MS.gene51469:CDS |
| GAGTTTGAAGTGTGTACGAT+TGG | 0.527953 | 3.4:-2201663 | MS.gene51469:CDS |
| TTTCTGCCAAGGTGAATTCA+CGG | 0.528880 | 3.4:+2203097 | None:intergenic |
| TACTAACCCAGGAGCTAAGC+CGG | 0.530151 | 3.4:+2204523 | None:intergenic |
| GAATTGGGCCTTGCATTCAA+AGG | 0.532973 | 3.4:-2201872 | MS.gene51469:CDS |
| TTGAGCACACTTTCTATACA+AGG | 0.533146 | 3.4:-2201512 | MS.gene51469:CDS |
| CAGGTACATCAATAGGAAAA+CGG | 0.533471 | 3.4:-2200887 | MS.gene51469:CDS |
| TATCTCTTCTTGACGCATCT+CGG | 0.536398 | 3.4:-2202782 | MS.gene51469:CDS |
| CAGACATCTGTTCCTCCCTC+GGG | 0.540175 | 3.4:+2202998 | None:intergenic |
| TTGATGTTTCAAACTTCCAT+CGG | 0.541674 | 3.4:-2204551 | MS.gene51469:CDS |
| AAACTCCAAGTCAGCAACTT+CGG | 0.543888 | 3.4:+2203029 | None:intergenic |
| AGATTGAGTGCTCCTATGGT+TGG | 0.548494 | 3.4:-2202679 | MS.gene51469:CDS |
| AGTTTGAAGTGTGTACGATT+GGG | 0.552660 | 3.4:-2201662 | MS.gene51469:CDS |
| TCTCAAGGAGGCTGTTTCAA+AGG | 0.552776 | 3.4:-2202953 | MS.gene51469:intron |
| AAGGCCGCTCTGGAATCAAA+AGG | 0.554420 | 3.4:-2201693 | MS.gene51469:CDS |
| TCTGACTACCTTTGAATGCA+AGG | 0.556311 | 3.4:+2201864 | None:intergenic |
| AATCGGAGCCGGAAGCGGAA+CGG | 0.562316 | 3.4:+2205949 | None:intergenic |
| GGATCAAGTGCGTGTTGATG+TGG | 0.564260 | 3.4:-2200778 | MS.gene51469:CDS |
| ATTCACTGATCTCATGGTGA+AGG | 0.564468 | 3.4:-2204801 | MS.gene51469:CDS |
| CCGTGCTGATCACTTGCTCA+AGG | 0.568893 | 3.4:-2204756 | MS.gene51469:CDS |
| ATGGTGAAGGATGAGAAAAC+CGG | 0.570901 | 3.4:-2204788 | MS.gene51469:CDS |
| TTGAAACAGCCTCCTTGAGA+CGG | 0.571311 | 3.4:+2202956 | None:intergenic |
| CATGCGTCCAGAAACTGCAC+AGG | 0.571580 | 3.4:-2203329 | MS.gene51469:CDS |
| TGCAAAGAGAATCCGTCTCA+AGG | 0.578892 | 3.4:-2202968 | MS.gene51469:CDS |
| TGAATTCACGGACTCTGAGA+AGG | 0.579544 | 3.4:+2203109 | None:intergenic |
| TTAATAGGAGCGACAAGTGA+AGG | 0.584099 | 3.4:+2201447 | None:intergenic |
| AACAACCTCTGGTGTCACAC+AGG | 0.585351 | 3.4:+2204850 | None:intergenic |
| TTCAGTGACTATCCGGGAGA+GGG | 0.586490 | 3.4:-2200808 | MS.gene51469:CDS |
| TGCTTCACGAGAATCGGAGC+CGG | 0.587342 | 3.4:+2205938 | None:intergenic |
| TCAAAACCAGAAGTTTGAAG+AGG | 0.587696 | 3.4:-2201403 | MS.gene51469:CDS |
| AAAGTGCTCAATTTCTGCCA+AGG | 0.590317 | 3.4:+2203086 | None:intergenic |
| ATACAAGGCAGAGTAAAGCT+GGG | 0.590667 | 3.4:-2201497 | MS.gene51469:CDS |
| CGCTCTGGAATCAAAAGGTG+AGG | 0.592220 | 3.4:-2201688 | MS.gene51469:CDS |
| ATTCAAAGGTAGTCAGAAGA+TGG | 0.592707 | 3.4:-2201858 | MS.gene51469:CDS |
| AACAACTTCAGTGACTATCC+GGG | 0.594164 | 3.4:-2200814 | MS.gene51469:CDS |
| ATCCGTCCAATCCCAAAGGA+TGG | 0.595925 | 3.4:+2201549 | None:intergenic |
| CTTCAGTGACTATCCGGGAG+AGG | 0.596679 | 3.4:-2200809 | MS.gene51469:CDS |
| TTCAGAACCTAAGGAAGTGG+AGG | 0.597015 | 3.4:-2202026 | MS.gene51469:intron |
| TCTAAAATCTTCCGGCCACG+TGG | 0.597264 | 3.4:-2204828 | MS.gene51469:CDS |
| TACGCTAGAACAGATGAACT+TGG | 0.599522 | 3.4:-2200864 | MS.gene51469:CDS |
| CTCAGCATCCCAACAGTCAG+CGG | 0.603636 | 3.4:+2202700 | None:intergenic |
| TGTAACTATTAATAAGAGCA+TGG | 0.603898 | 3.4:-2201634 | MS.gene51469:CDS |
| AATGCGTGAGAAAGAAGCAT+TGG | 0.605574 | 3.4:-2201721 | MS.gene51469:CDS |
| GATGGTGGTTGAAGCACTTG+AGG | 0.609464 | 3.4:-2201840 | MS.gene51469:intron |
| TTATGGTCCTCCTGGTTGCG+CGG | 0.610715 | 3.4:-2205826 | MS.gene51469:CDS |
| GCAGCATCTTGCCAATGAGA+TGG | 0.611380 | 3.4:-2202732 | MS.gene51469:CDS |
| CTGCAGATATCTCCCCGTCA+AGG | 0.612394 | 3.4:-2203132 | MS.gene51469:intron |
| TATCCGGGAGAGGGACAGCA+AGG | 0.617896 | 3.4:-2200799 | MS.gene51469:CDS |
| AAGGATGGTTCAATCACAGA+TGG | 0.619112 | 3.4:+2201564 | None:intergenic |
| ACAACCTCTGGTGTCACACA+GGG | 0.619578 | 3.4:+2204851 | None:intergenic |
| CAGAGTCCGTGAATTCACCT+TGG | 0.620152 | 3.4:-2203103 | MS.gene51469:CDS |
| CGTGCCCTTTGCTGTCACTG+TGG | 0.621635 | 3.4:-2200841 | MS.gene51469:CDS |
| TGAATCCACAGTGACAGCAA+AGG | 0.622165 | 3.4:+2200836 | None:intergenic |
| GGAACGGAGAGATTCTTCGT+TGG | 0.622339 | 3.4:+2205965 | None:intergenic |
| CATCTGTAGCTGTAGAAGAG+TGG | 0.629091 | 3.4:+2200679 | None:intergenic |
| TTAGATTTAACCGCGCAACC+AGG | 0.632943 | 3.4:+2205816 | None:intergenic |
| AGCTGTCTCTGTTATTCGGG+AGG | 0.636008 | 3.4:-2200751 | MS.gene51469:CDS |
| AACCGAAGGCCAGAGGACAT+GGG | 0.640304 | 3.4:-2200727 | MS.gene51469:CDS |
| GATGCTGCCTAAATCTCAAG+CGG | 0.643670 | 3.4:+2202747 | None:intergenic |
| TTGTCCCTGTGTGACACCAG+AGG | 0.651850 | 3.4:-2204855 | MS.gene51469:CDS |
| AGAGGACATGGGAAGATGTG+TGG | 0.653737 | 3.4:-2200716 | MS.gene51469:CDS |
| AAGGGTAAGGATCAGAGAGT+GGG | 0.653873 | 3.4:+2204579 | None:intergenic |
| TATTATCCGTCCAATCCCAA+AGG | 0.654955 | 3.4:+2201545 | None:intergenic |
| AACACATTCTATCCAACCAT+AGG | 0.656952 | 3.4:+2202667 | None:intergenic |
| AGATGAGAAATCATCCAGCA+TGG | 0.657483 | 3.4:+2204658 | None:intergenic |
| CAAAGGTAGTCAGAAGATGG+TGG | 0.657778 | 3.4:-2201855 | MS.gene51469:CDS |
| GTTATTCGGGAGGTAACCGA+AGG | 0.660208 | 3.4:-2200741 | MS.gene51469:CDS |
| GAGCATGGTGAGCATTCACA+AGG | 0.660779 | 3.4:-2201619 | MS.gene51469:CDS |
| ACTCTGAGAAGGCCTTGACG+GGG | 0.665312 | 3.4:+2203120 | None:intergenic |
| TGGGTTCTTAGTTTCAGGAG+CGG | 0.666414 | 3.4:+2204598 | None:intergenic |
| GAGCGACAAGTGAAGGAAAG+CGG | 0.666721 | 3.4:+2201454 | None:intergenic |
| AACCCAGGAGCTAAGCCGGA+GGG | 0.672835 | 3.4:+2204527 | None:intergenic |
| GATTTAACCGCGCAACCAGG+AGG | 0.676395 | 3.4:+2205819 | None:intergenic |
| TATGGTTGGATAGAATGTGT+TGG | 0.677049 | 3.4:-2202665 | MS.gene51469:CDS |
| GGGAGGTAACCGAAGGCCAG+AGG | 0.679390 | 3.4:-2200734 | MS.gene51469:CDS |
| TACAAGGCAGAGTAAAGCTG+GGG | 0.679775 | 3.4:-2201496 | MS.gene51469:CDS |
| ACGTTCAAGTGTATTAACAA+CGG | 0.687330 | 3.4:+2205905 | None:intergenic |
| CCTTGAGCAAGTGATCAGCA+CGG | 0.703037 | 3.4:+2204756 | None:intergenic |
| CCGTCGTTTAAAATTTACCG+CGG | 0.709442 | 3.4:-2205867 | MS.gene51469:CDS |
| TTTGGAGGAAAACATGCTTG+AGG | 0.710730 | 3.4:-2204882 | MS.gene51469:CDS |
| TAACCCAGGAGCTAAGCCGG+AGG | 0.724527 | 3.4:+2204526 | None:intergenic |
| AAAGAGAATCCGTCTCAAGG+AGG | 0.725034 | 3.4:-2202965 | MS.gene51469:CDS |
| ATGCGTCCAGAAACTGCACA+GGG | 0.734361 | 3.4:-2203328 | MS.gene51469:CDS |
| GTAGCTGTAGAAGAGTGGTG+AGG | 0.735369 | 3.4:+2200684 | None:intergenic |
| CATAAAGACCAGTAACACCG+CGG | 0.784578 | 3.4:+2205850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAATTTAAATATATT+TGG | + | chr3.4:2201677-2201696 | None:intergenic | 0.0% |
| !! | AAAAAACATTTGAATATAAA+GGG | + | chr3.4:2205590-2205609 | None:intergenic | 10.0% |
| !! | ATTTGAAAAAAATAAAACAT+GGG | - | chr3.4:2203049-2203068 | MS.gene51469:CDS | 10.0% |
| !! | TATGTTATAAATAAAATTAG+AGG | - | chr3.4:2205381-2205400 | MS.gene51469:intron | 10.0% |
| !!! | AATAAAAATTTTAATACTTC+AGG | + | chr3.4:2203248-2203267 | None:intergenic | 10.0% |
| !!! | ATTTTTATAACAAAAATGAA+AGG | + | chr3.4:2205734-2205753 | None:intergenic | 10.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr3.4:2204287-2204306 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr3.4:2204286-2204305 | MS.gene51469:intron | 15.0% |
| !! | ATAAATAAAATTAGAGGTTT+AGG | - | chr3.4:2205387-2205406 | MS.gene51469:intron | 15.0% |
| !! | ATTAAAAGTTATTATTGCAT+TGG | + | chr3.4:2204200-2204219 | None:intergenic | 15.0% |
| !! | CATTTGAAAAAAATAAAACA+TGG | - | chr3.4:2203048-2203067 | MS.gene51469:CDS | 15.0% |
| !! | GAAAAAACATTTGAATATAA+AGG | + | chr3.4:2205591-2205610 | None:intergenic | 15.0% |
| !! | TCTTTACATTGAAATATTTA+TGG | - | chr3.4:2200968-2200987 | MS.gene51469:intron | 15.0% |
| !! | TGAATTATTATTTCAGAAAT+TGG | - | chr3.4:2204731-2204750 | MS.gene51469:CDS | 15.0% |
| !! | TTATTTATAACATAATCTAC+AGG | + | chr3.4:2205375-2205394 | None:intergenic | 15.0% |
| !!! | AAATTTTTATTATCATAGCA+AGG | - | chr3.4:2203257-2203276 | MS.gene51469:CDS | 15.0% |
| !!! | ATTATTTTGATTTCTTTTTC+AGG | - | chr3.4:2203797-2203816 | MS.gene51469:intron | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | + | chr3.4:2204160-2204179 | None:intergenic | 15.0% |
| !!! | GCAAAATAAATTTAATCTTT+TGG | + | chr3.4:2201641-2201660 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr3.4:2204263-2204282 | None:intergenic | 15.0% |
| !!! | TATGGTTTAACTTAATTTTA+GGG | - | chr3.4:2200986-2201005 | MS.gene51469:intron | 15.0% |
| !!! | TTATGGTTTAACTTAATTTT+AGG | - | chr3.4:2200985-2201004 | MS.gene51469:intron | 15.0% |
| !!! | TTATTTTGATTTCTTTTTCA+GGG | - | chr3.4:2203798-2203817 | MS.gene51469:intron | 15.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr3.4:2204277-2204296 | MS.gene51469:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+CGG | + | chr3.4:2204320-2204339 | None:intergenic | 20.0% |
| !! | ACAACAACAACAATAAAATT+AGG | + | chr3.4:2201719-2201738 | None:intergenic | 20.0% |
| !! | ATCAAAATAATCATAACATG+TGG | + | chr3.4:2203788-2203807 | None:intergenic | 20.0% |
| !! | GAAATAATAATTCACATAAC+AGG | + | chr3.4:2204725-2204744 | None:intergenic | 20.0% |
| !!! | AAAGAAATTAGTCTTATCAA+TGG | - | chr3.4:2202658-2202677 | MS.gene51469:CDS | 20.0% |
| !!! | AAGAAATTAGTCTTATCAAT+GGG | - | chr3.4:2202659-2202678 | MS.gene51469:CDS | 20.0% |
| !!! | AATTTAATCTTTTGGTATTG+AGG | + | chr3.4:2201633-2201652 | None:intergenic | 20.0% |
| !!! | ATGGTTTAACTTAATTTTAG+GGG | - | chr3.4:2200987-2201006 | MS.gene51469:intron | 20.0% |
| !!! | ATTTCTCATATTTTAATGTG+TGG | - | chr3.4:2204519-2204538 | MS.gene51469:intron | 20.0% |
| !!! | TTCTAAAAACTCAAAATCAA+AGG | - | chr3.4:2202929-2202948 | MS.gene51469:intron | 20.0% |
| !!! | TTTAGAATATATGTCTCAAA+GGG | + | chr3.4:2202864-2202883 | None:intergenic | 20.0% |
| !!! | TTTGAAACATCAAATTGAAA+GGG | + | chr3.4:2202088-2202107 | None:intergenic | 20.0% |
| !!! | TTTGTTATAAAAATGTTACC+AGG | - | chr3.4:2205740-2205759 | MS.gene51469:intron | 20.0% |
| !!! | TTTTAGAATATATGTCTCAA+AGG | + | chr3.4:2202865-2202884 | None:intergenic | 20.0% |
| ! | AAAACAAAATTGCGTATACA+AGG | + | chr3.4:2205672-2205691 | None:intergenic | 25.0% |
| ! | AAAGACTTGTACTATTACAA+TGG | - | chr3.4:2203357-2203376 | MS.gene51469:intron | 25.0% |
| ! | AAGTAAGGTATATGAGTATT+TGG | - | chr3.4:2201376-2201395 | MS.gene51469:CDS | 25.0% |
| ! | ACAACAAAGAAGAAGAAAAA+CGG | + | chr3.4:2202164-2202183 | None:intergenic | 25.0% |
| ! | ACCTTGATGTCAATAATTAA+AGG | - | chr3.4:2204437-2204456 | MS.gene51469:intron | 25.0% |
| ! | AGTAAGGTATATGAGTATTT+GGG | - | chr3.4:2201377-2201396 | MS.gene51469:CDS | 25.0% |
| ! | ATCACTTTATCTTTAACTCA+AGG | + | chr3.4:2201129-2201148 | None:intergenic | 25.0% |
| ! | ATTACAAACCCAAAACAAAA+TGG | - | chr3.4:2202232-2202251 | MS.gene51469:intron | 25.0% |
| ! | CAACGACTTAGAAATTAATT+TGG | + | chr3.4:2205272-2205291 | None:intergenic | 25.0% |
| ! | CATATACCTTACTTAAATGA+GGG | + | chr3.4:2201370-2201389 | None:intergenic | 25.0% |
| ! | CCTTGATGTCAATAATTAAA+GGG | - | chr3.4:2204438-2204457 | MS.gene51469:intron | 25.0% |
| ! | CTTGATGTCAATAATTAAAG+GGG | - | chr3.4:2204439-2204458 | MS.gene51469:intron | 25.0% |
| ! | TCATATACCTTACTTAAATG+AGG | + | chr3.4:2201371-2201390 | None:intergenic | 25.0% |
| ! | TGTAACTATTAATAAGAGCA+TGG | - | chr3.4:2205012-2205031 | MS.gene51469:intron | 25.0% |
| ! | TTGATGTCAATAATTAAAGG+GGG | - | chr3.4:2204440-2204459 | MS.gene51469:intron | 25.0% |
| !! | GTTTGAAACATCAAATTGAA+AGG | + | chr3.4:2202089-2202108 | None:intergenic | 25.0% |
| !! | TTTAGTTTCGAAGATTTACA+AGG | + | chr3.4:2205461-2205480 | None:intergenic | 25.0% |
| !! | TTTGAACTTGCATTTTGTAT+TGG | - | chr3.4:2203449-2203468 | MS.gene51469:intron | 25.0% |
| !!! | GAAGTATTTTTCTTTGAAGT+AGG | - | chr3.4:2205544-2205563 | MS.gene51469:intron | 25.0% |
| !!! | GAATATGATTTTGACATGTT+TGG | - | chr3.4:2200901-2200920 | MS.gene51469:intron | 25.0% |
| !!! | TGTATACGCAATTTTGTTTT+AGG | - | chr3.4:2205672-2205691 | MS.gene51469:intron | 25.0% |
| !!! | TTTTAATTCTTTGTACCATG+TGG | + | chr3.4:2202605-2202624 | None:intergenic | 25.0% |
| !!! | TTTTTCTTCTTCTTTGTTGT+TGG | - | chr3.4:2202164-2202183 | MS.gene51469:intron | 25.0% |
| AACAAAGAAGAAGAAAAACG+GGG | + | chr3.4:2202162-2202181 | None:intergenic | 30.0% | |
| AACATCAAATTGAAAGGGTA+AGG | + | chr3.4:2202083-2202102 | None:intergenic | 30.0% | |
| AACCTCTTGTGTAAAAAACA+AGG | - | chr3.4:2201225-2201244 | MS.gene51469:intron | 30.0% | |
| AACCTGTTTCAGTTGAAAAA+AGG | + | chr3.4:2203297-2203316 | None:intergenic | 30.0% | |
| AACTCCTATCAAGAAAGAAT+TGG | - | chr3.4:2204758-2204777 | MS.gene51469:CDS | 30.0% | |
| AATCCATGATTATTACTCTC+TGG | + | chr3.4:2202984-2203003 | None:intergenic | 30.0% | |
| AATCTAATGTTCTCTCTTTC+TGG | - | chr3.4:2200846-2200865 | MS.gene51469:CDS | 30.0% | |
| ACGTTCAAGTGTATTAACAA+CGG | + | chr3.4:2200744-2200763 | None:intergenic | 30.0% | |
| ACTCCTATCAAGAAAGAATT+GGG | - | chr3.4:2204759-2204778 | MS.gene51469:CDS | 30.0% | |
| ATTGTCAATAATGAGACTCT+TGG | - | chr3.4:2203822-2203841 | MS.gene51469:intron | 30.0% | |
| CAAAAATGAAAGGTTAGTAC+TGG | + | chr3.4:2205724-2205743 | None:intergenic | 30.0% | |
| CAACAAAGAAGAAGAAAAAC+GGG | + | chr3.4:2202163-2202182 | None:intergenic | 30.0% | |
| CAACAATTCTTGCATGAAAA+AGG | + | chr3.4:2203749-2203768 | None:intergenic | 30.0% | |
| CCCTTTAATTATTGACATCA+AGG | + | chr3.4:2204441-2204460 | None:intergenic | 30.0% | |
| CCTTAGGACACTTAAAAAAA+GGG | + | chr3.4:2201331-2201350 | None:intergenic | 30.0% | |
| CTTGTGTAAAAAACAAGGTA+TGG | - | chr3.4:2201230-2201249 | MS.gene51469:intron | 30.0% | |
| GCACTACGTAAAATTGATTA+TGG | - | chr3.4:2201099-2201118 | MS.gene51469:intron | 30.0% | |
| GTAAGGTATATGAGTATTTG+GGG | - | chr3.4:2201378-2201397 | MS.gene51469:CDS | 30.0% | |
| GTGTTGTAAATGATTACATC+AGG | - | chr3.4:2203007-2203026 | MS.gene51469:CDS | 30.0% | |
| TAAGGTATATGAGTATTTGG+GGG | - | chr3.4:2201379-2201398 | MS.gene51469:CDS | 30.0% | |
| TATATACTTGCTTTGCAAAC+AGG | - | chr3.4:2202760-2202779 | MS.gene51469:CDS | 30.0% | |
| TCATTTCCCTCATTTAAGTA+AGG | - | chr3.4:2201361-2201380 | MS.gene51469:CDS | 30.0% | |
| TCTACTGATCAACTCTAATT+TGG | + | chr3.4:2202407-2202426 | None:intergenic | 30.0% | |
| TGCTTAGATACATTATGCAA+CGG | - | chr3.4:2201152-2201171 | MS.gene51469:intron | 30.0% | |
| TTATGCATGATAAAGTTGCA+AGG | + | chr3.4:2202798-2202817 | None:intergenic | 30.0% | |
| TTGATGTTTCAAACTTCCAT+CGG | - | chr3.4:2202095-2202114 | MS.gene51469:intron | 30.0% | |
| TTGCAACTTTATCATGCATA+AGG | - | chr3.4:2202797-2202816 | MS.gene51469:CDS | 30.0% | |
| ! | AAAGTGAGTTGAATGTAAAG+TGG | + | chr3.4:2201022-2201041 | None:intergenic | 30.0% |
| ! | AATTTTACGTAGTGCATGTT+TGG | + | chr3.4:2201094-2201113 | None:intergenic | 30.0% |
| ! | AGAAATTATTCTTCTGAGGA+AGG | - | chr3.4:2201402-2201421 | MS.gene51469:CDS | 30.0% |
| ! | AGACTCTTGGTTATTTCATT+GGG | - | chr3.4:2203835-2203854 | MS.gene51469:intron | 30.0% |
| ! | CGAAAAATTTTCAGAACCTA+AGG | - | chr3.4:2204611-2204630 | MS.gene51469:CDS | 30.0% |
| ! | TATAGAAAGTGTGCTCAAAT+AGG | + | chr3.4:2205132-2205151 | None:intergenic | 30.0% |
| ! | TATTAATTGGAGGGTACAAT+TGG | + | chr3.4:2204225-2204244 | None:intergenic | 30.0% |
| ! | TGTTGTTGTTGTTGTTGTAT+TGG | + | chr3.4:2201582-2201601 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr3.4:2204369-2204388 | MS.gene51469:intron | 30.0% |
| !! | AAGGAATCACCATTTTGTTT+TGG | + | chr3.4:2202244-2202263 | None:intergenic | 30.0% |
| !! | AATTAGTCTTATCAATGGGA+AGG | - | chr3.4:2202663-2202682 | MS.gene51469:CDS | 30.0% |
| !! | ATTTTGTATTGGTGTCTTTG+TGG | - | chr3.4:2203460-2203479 | MS.gene51469:intron | 30.0% |
| !! | CTTTTAGAAATGAGGTTAGT+TGG | - | chr3.4:2203418-2203437 | MS.gene51469:intron | 30.0% |
| !! | GTTACTGGTCTTTATGATTA+TGG | - | chr3.4:2200803-2200822 | MS.gene51469:CDS | 30.0% |
| !! | TTTTGTATTGGTGTCTTTGT+GGG | - | chr3.4:2203461-2203480 | MS.gene51469:intron | 30.0% |
| !!! | AGGAATCACCATTTTGTTTT+GGG | + | chr3.4:2202243-2202262 | None:intergenic | 30.0% |
| !!! | CCTTTTTTTAAGTGTCCTAA+GGG | - | chr3.4:2201329-2201348 | MS.gene51469:intron | 30.0% |
| !!! | TACCTTGTTTTTTACACAAG+AGG | + | chr3.4:2201230-2201249 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr3.4:2204368-2204387 | None:intergenic | 30.0% |
| !!! | TTTGAAGTAGGCTTTGTTTT+TGG | - | chr3.4:2205556-2205575 | MS.gene51469:intron | 30.0% |
| AAATGATAACAAGTGCCCTT+AGG | + | chr3.4:2201347-2201366 | None:intergenic | 35.0% | |
| AACACATTCTATCCAACCAT+AGG | + | chr3.4:2203982-2204001 | None:intergenic | 35.0% | |
| AATCACATGACCAAAAACAC+AGG | + | chr3.4:2203171-2203190 | None:intergenic | 35.0% | |
| ACAAAGAAGAAGAAAAACGG+GGG | + | chr3.4:2202161-2202180 | None:intergenic | 35.0% | |
| AGAAAGCTGTCTCTGTTATT+CGG | - | chr3.4:2205891-2205910 | MS.gene51469:CDS | 35.0% | |
| AGAGCTCATAAGGAATTTCA+TGG | + | chr3.4:2202341-2202360 | None:intergenic | 35.0% | |
| AGGTCAATTAATGACGAACA+AGG | + | chr3.4:2204705-2204724 | None:intergenic | 35.0% | |
| ATGTTACCAGGTACATCAAT+AGG | - | chr3.4:2205752-2205771 | MS.gene51469:intron | 35.0% | |
| ATTCAAAGGTAGTCAGAAGA+TGG | - | chr3.4:2204788-2204807 | MS.gene51469:CDS | 35.0% | |
| ATTGAGGAATCCTACTTAGT+GGG | + | chr3.4:2201617-2201636 | None:intergenic | 35.0% | |
| ATTTACATGTTCTCGAGCTA+AGG | + | chr3.4:2202722-2202741 | None:intergenic | 35.0% | |
| CAGGTACATCAATAGGAAAA+CGG | - | chr3.4:2205759-2205778 | MS.gene51469:intron | 35.0% | |
| CCCTTAGGACACTTAAAAAA+AGG | + | chr3.4:2201332-2201351 | None:intergenic | 35.0% | |
| CTTACAAGCAAATTATCCTC+AGG | + | chr3.4:2205491-2205510 | None:intergenic | 35.0% | |
| GATTTCTCATCTCAAGAACT+TGG | - | chr3.4:2201999-2202018 | MS.gene51469:intron | 35.0% | |
| GGAAAAACTGTGCACTTAAT+AGG | + | chr3.4:2205217-2205236 | None:intergenic | 35.0% | |
| GGAAAAATTCACTGATCTCA+TGG | - | chr3.4:2201839-2201858 | MS.gene51469:intron | 35.0% | |
| GTACAATACACCAAAATGGT+GGG | - | chr3.4:2201257-2201276 | MS.gene51469:intron | 35.0% | |
| TAGGATGAGACTTATCTTCA+GGG | + | chr3.4:2203591-2203610 | None:intergenic | 35.0% | |
| TATCATGCATAAGGACCTTT+AGG | - | chr3.4:2202806-2202825 | MS.gene51469:CDS | 35.0% | |
| TATGGTTGGATAGAATGTGT+TGG | - | chr3.4:2203981-2204000 | MS.gene51469:intron | 35.0% | |
| TATTGAGGAATCCTACTTAG+TGG | + | chr3.4:2201618-2201637 | None:intergenic | 35.0% | |
| TCAAAACCAGAAGTTTGAAG+AGG | - | chr3.4:2205243-2205262 | MS.gene51469:intron | 35.0% | |
| TGTAAGATCACTTCTTGGAT+GGG | - | chr3.4:2205505-2205524 | MS.gene51469:intron | 35.0% | |
| TTAGGATGAGACTTATCTTC+AGG | + | chr3.4:2203592-2203611 | None:intergenic | 35.0% | |
| TTCAATTGCCACAGCAAATA+TGG | + | chr3.4:2202640-2202659 | None:intergenic | 35.0% | |
| TTCATACTGCAGGAAAAAAG+TGG | - | chr3.4:2204570-2204589 | MS.gene51469:CDS | 35.0% | |
| TTGAGCACACTTTCTATACA+AGG | - | chr3.4:2205134-2205153 | MS.gene51469:intron | 35.0% | |
| TTGCAATGAGAAGCTTCAAA+AGG | - | chr3.4:2201917-2201936 | MS.gene51469:intron | 35.0% | |
| TTGCTTGTAAGATCACTTCT+TGG | - | chr3.4:2205500-2205519 | MS.gene51469:intron | 35.0% | |
| TTGTAAGATCACTTCTTGGA+TGG | - | chr3.4:2205504-2205523 | MS.gene51469:intron | 35.0% | |
| TTTGTACCATGTGGATTCTT+TGG | + | chr3.4:2202596-2202615 | None:intergenic | 35.0% | |
| ! | AATTCGTGGTGTAACTGTTT+TGG | - | chr3.4:2204830-2204849 | MS.gene51469:CDS | 35.0% |
| ! | AGTTTGAAGTGTGTACGATT+GGG | - | chr3.4:2204984-2205003 | MS.gene51469:intron | 35.0% |
| ! | ATGCTCTAAACTCTAATCCA+TGG | - | chr3.4:2203214-2203233 | MS.gene51469:intron | 35.0% |
| ! | ATTTTCAGAACCTAAGGAAG+TGG | - | chr3.4:2204617-2204636 | MS.gene51469:CDS | 35.0% |
| ! | CTAAGTGATTCCTGTGTTTT+TGG | - | chr3.4:2203158-2203177 | MS.gene51469:intron | 35.0% |
| ! | GAGACTCTTGGTTATTTCAT+TGG | - | chr3.4:2203834-2203853 | MS.gene51469:intron | 35.0% |
| ! | GAGGGAGTATAATCTCAAAT+TGG | - | chr3.4:2204391-2204410 | MS.gene51469:intron | 35.0% |
| ! | GATCAACTCTAATTTGGTGA+TGG | + | chr3.4:2202401-2202420 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr3.4:2204238-2204257 | None:intergenic | 35.0% |
| ! | TGCTGATGGTCTTGATTTAT+TGG | - | chr3.4:2204653-2204672 | MS.gene51469:CDS | 35.0% |
| ! | TGCTTTTGTATTCATACTGC+AGG | - | chr3.4:2204560-2204579 | MS.gene51469:CDS | 35.0% |
| ! | TGGTCATGTGATTTTTACCT+GGG | - | chr3.4:2203178-2203197 | MS.gene51469:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr3.4:2204234-2204253 | None:intergenic | 35.0% |
| ! | TTGGTCATGTGATTTTTACC+TGG | - | chr3.4:2203177-2203196 | MS.gene51469:intron | 35.0% |
| ! | TTGTTGTTGTATTGGCACAT+AGG | + | chr3.4:2201574-2201593 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr3.4:2204134-2204153 | None:intergenic | 35.0% |
| !! | AGAACTTGGTGCTAAGATTA+AGG | - | chr3.4:2202013-2202032 | MS.gene51469:intron | 35.0% |
| !! | CTGCATGTAGCATTTTGTTT+TGG | - | chr3.4:2201746-2201765 | MS.gene51469:intron | 35.0% |
| !! | GAAAGAAGCATTGGATATGA+AGG | - | chr3.4:2204934-2204953 | MS.gene51469:intron | 35.0% |
| !! | GAGGTTGTTCTAAAATCTTC+CGG | - | chr3.4:2201810-2201829 | MS.gene51469:intron | 35.0% |
| !! | GTGTATTAACAACGGATTGA+CGG | + | chr3.4:2200736-2200755 | None:intergenic | 35.0% |
| !!! | ACACACATTTTAACTCCTTG+TGG | + | chr3.4:2202489-2202508 | None:intergenic | 35.0% |
| !!! | CATGTAGCATTTTGTTTTGG+AGG | - | chr3.4:2201749-2201768 | MS.gene51469:intron | 35.0% |
| !!! | CCCTTTTTTTAAGTGTCCTA+AGG | - | chr3.4:2201328-2201347 | MS.gene51469:intron | 35.0% |
| !!! | CTCCTTTTTTCAACTGAAAC+AGG | - | chr3.4:2203292-2203311 | MS.gene51469:CDS | 35.0% |
| !!! | GAAGATTTTAGAACAACCTC+TGG | + | chr3.4:2201810-2201829 | None:intergenic | 35.0% |
| AAACTCCAAGTCAGCAACTT+CGG | + | chr3.4:2203620-2203639 | None:intergenic | 40.0% | |
| AACAACTTCAGTGACTATCC+GGG | - | chr3.4:2205832-2205851 | MS.gene51469:CDS | 40.0% | |
| AAGGATGGTTCAATCACAGA+TGG | + | chr3.4:2205085-2205104 | None:intergenic | 40.0% | |
| AAGGCTATTTGGCATACGTA+TGG | + | chr3.4:2202703-2202722 | None:intergenic | 40.0% | |
| ACAAAGACCGCTTGAGATTT+AGG | - | chr3.4:2203892-2203911 | MS.gene51469:intron | 40.0% | |
| ACTCAAATACCTTGTGATGC+TGG | + | chr3.4:2202530-2202549 | None:intergenic | 40.0% | |
| AGATGAGAAATCATCCAGCA+TGG | + | chr3.4:2201991-2202010 | None:intergenic | 40.0% | |
| AGGCCCAATTCTTTCTTGAT+AGG | + | chr3.4:2204765-2204784 | None:intergenic | 40.0% | |
| ATACAAGGCAGAGTAAAGCT+GGG | - | chr3.4:2205149-2205168 | MS.gene51469:intron | 40.0% | |
| ATCTACACTGCTGTCAATTG+TGG | + | chr3.4:2201547-2201566 | None:intergenic | 40.0% | |
| ATGGTGAAGGATGAGAAAAC+CGG | - | chr3.4:2201858-2201877 | MS.gene51469:CDS | 40.0% | |
| ATTACTCTCTGGTGGCATAT+GGG | + | chr3.4:2202973-2202992 | None:intergenic | 40.0% | |
| ATTCACTGATCTCATGGTGA+AGG | - | chr3.4:2201845-2201864 | MS.gene51469:CDS | 40.0% | |
| CAACAACTTCAGTGACTATC+CGG | - | chr3.4:2205831-2205850 | MS.gene51469:CDS | 40.0% | |
| CAATGAATCTACATGCCACA+AGG | - | chr3.4:2202471-2202490 | MS.gene51469:intron | 40.0% | |
| CACTTAAAAAAAGGGCAGCT+CGG | + | chr3.4:2201323-2201342 | None:intergenic | 40.0% | |
| CCAATGAGATAGAGCTCATA+AGG | + | chr3.4:2202351-2202370 | None:intergenic | 40.0% | |
| CCACCAGAGAGTAATAATCA+TGG | - | chr3.4:2202978-2202997 | MS.gene51469:CDS | 40.0% | |
| CCATGATTATTACTCTCTGG+TGG | + | chr3.4:2202981-2203000 | None:intergenic | 40.0% | |
| CCTTATGAGCTCTATCTCAT+TGG | - | chr3.4:2202348-2202367 | MS.gene51469:intron | 40.0% | |
| CGTACAATACACCAAAATGG+TGG | - | chr3.4:2201256-2201275 | MS.gene51469:intron | 40.0% | |
| CTCATTGGTGTGAAGATGAT+AGG | - | chr3.4:2202363-2202382 | MS.gene51469:intron | 40.0% | |
| CTGCGTACAATACACCAAAA+TGG | - | chr3.4:2201253-2201272 | MS.gene51469:intron | 40.0% | |
| CTGTGATTGAACCATCCTTT+GGG | - | chr3.4:2205086-2205105 | MS.gene51469:intron | 40.0% | |
| CTTGTGGCATGTAGATTCAT+TGG | + | chr3.4:2202473-2202492 | None:intergenic | 40.0% | |
| CTTTATGATTATGGTCCTCC+TGG | - | chr3.4:2200812-2200831 | MS.gene51469:CDS | 40.0% | |
| GAAACTAAATGCTTCTCCTG+AGG | - | chr3.4:2205472-2205491 | MS.gene51469:intron | 40.0% | |
| GAAAGCTGTCTCTGTTATTC+GGG | - | chr3.4:2205892-2205911 | MS.gene51469:CDS | 40.0% | |
| GAATCCTACTTAGTGGGATA+AGG | + | chr3.4:2201611-2201630 | None:intergenic | 40.0% | |
| GGGGAGAAATTATTCTTCTG+AGG | - | chr3.4:2201398-2201417 | MS.gene51469:CDS | 40.0% | |
| GGTGCTAAGATTAAGGAGTA+TGG | - | chr3.4:2202020-2202039 | MS.gene51469:intron | 40.0% | |
| GTCTTTGTGGGATTGAGATT+TGG | - | chr3.4:2203473-2203492 | MS.gene51469:intron | 40.0% | |
| TACGCTAGAACAGATGAACT+TGG | - | chr3.4:2205782-2205801 | MS.gene51469:intron | 40.0% | |
| TACTTCAGGTGAAATAGCCA+TGG | + | chr3.4:2203234-2203253 | None:intergenic | 40.0% | |
| TAGCTATTTGCAGAGAGTCA+TGG | + | chr3.4:2204865-2204884 | None:intergenic | 40.0% | |
| TATACAAGGCAGAGTAAAGC+TGG | - | chr3.4:2205148-2205167 | MS.gene51469:intron | 40.0% | |
| TATCTCTTCTTGACGCATCT+CGG | - | chr3.4:2203864-2203883 | MS.gene51469:intron | 40.0% | |
| TATTACTCTCTGGTGGCATA+TGG | + | chr3.4:2202974-2202993 | None:intergenic | 40.0% | |
| TATTATCCGTCCAATCCCAA+AGG | + | chr3.4:2205104-2205123 | None:intergenic | 40.0% | |
| TCGCATAAGATCGACATTAC+AGG | - | chr3.4:2205307-2205326 | MS.gene51469:intron | 40.0% | |
| TCTACAGCTACAGATGATTG+AGG | - | chr3.4:2205974-2205993 | MS.gene51469:CDS | 40.0% | |
| TCTGACTACCTTTGAATGCA+AGG | + | chr3.4:2204785-2204804 | None:intergenic | 40.0% | |
| TCTGTGATTGAACCATCCTT+TGG | - | chr3.4:2205085-2205104 | MS.gene51469:intron | 40.0% | |
| TTAATAGGAGCGACAAGTGA+AGG | + | chr3.4:2205202-2205221 | None:intergenic | 40.0% | |
| TTGAGAGATGGAATCTTCTC+TGG | - | chr3.4:2204897-2204916 | MS.gene51469:intron | 40.0% | |
| TTTCTGCCAAGGTGAATTCA+CGG | + | chr3.4:2203552-2203571 | None:intergenic | 40.0% | |
| TTTGGAGGAAAACATGCTTG+AGG | - | chr3.4:2201764-2201783 | MS.gene51469:intron | 40.0% | |
| ! | AAAGTGCTCAATTTCTGCCA+AGG | + | chr3.4:2203563-2203582 | None:intergenic | 40.0% |
| ! | AATGCGTGAGAAAGAAGCAT+TGG | - | chr3.4:2204925-2204944 | MS.gene51469:intron | 40.0% |
| ! | AGCATCACAAGGTATTTGAG+TGG | - | chr3.4:2202529-2202548 | MS.gene51469:intron | 40.0% |
| ! | ATCACAAGGTATTTGAGTGG+GGG | - | chr3.4:2202532-2202551 | MS.gene51469:intron | 40.0% |
| ! | CAAATTGGTTTCCCTACATC+CGG | - | chr3.4:2204406-2204425 | MS.gene51469:intron | 40.0% |
| ! | CATCACAAGGTATTTGAGTG+GGG | - | chr3.4:2202531-2202550 | MS.gene51469:intron | 40.0% |
| ! | CCGCGGTAAATTTTAAACGA+CGG | + | chr3.4:2200782-2200801 | None:intergenic | 40.0% |
| ! | CCGTCGTTTAAAATTTACCG+CGG | - | chr3.4:2200779-2200798 | MS.gene51469:CDS | 40.0% |
| ! | CGTTTTCCTATTGATGTACC+TGG | + | chr3.4:2205761-2205780 | None:intergenic | 40.0% |
| ! | GAGTTTGAAGTGTGTACGAT+TGG | - | chr3.4:2204983-2205002 | MS.gene51469:intron | 40.0% |
| ! | GATCAGTGAATTTTTCCACG+TGG | + | chr3.4:2201836-2201855 | None:intergenic | 40.0% |
| ! | GCATCACAAGGTATTTGAGT+GGG | - | chr3.4:2202530-2202549 | MS.gene51469:intron | 40.0% |
| ! | GGAGTTTTTAATGTTCCCGA+GGG | - | chr3.4:2203633-2203652 | MS.gene51469:intron | 40.0% |
| ! | GGTCATGTGATTTTTACCTG+GGG | - | chr3.4:2203179-2203198 | MS.gene51469:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr3.4:2204235-2204254 | None:intergenic | 40.0% |
| ! | TAAGTGCACAGTTTTTCCTC+TGG | - | chr3.4:2205219-2205238 | MS.gene51469:intron | 40.0% |
| ! | TGGAGTTTTTAATGTTCCCG+AGG | - | chr3.4:2203632-2203651 | MS.gene51469:intron | 40.0% |
| ! | TTTGAAGTGACTACTAACCC+AGG | + | chr3.4:2202137-2202156 | None:intergenic | 40.0% |
| !! | AAAATTTACCGCGGTGTTAC+TGG | - | chr3.4:2200788-2200807 | MS.gene51469:CDS | 40.0% |
| !! | ATTGAACCATCCTTTGGGAT+TGG | - | chr3.4:2205091-2205110 | MS.gene51469:intron | 40.0% |
| !! | GACATCAAGGTTGATGAATC+CGG | + | chr3.4:2204428-2204447 | None:intergenic | 40.0% |
| !! | GAGGTACTGTTTAATGCTGA+TGG | - | chr3.4:2204639-2204658 | MS.gene51469:CDS | 40.0% |
| !! | TGGACAGGCTTTTAGAAATG+AGG | - | chr3.4:2203410-2203429 | MS.gene51469:intron | 40.0% |
| !!! | AACTTCTGGTTTTGAACCAG+AGG | + | chr3.4:2205238-2205257 | None:intergenic | 40.0% |
| !!! | ATACCTTGTGATGCTGGTTT+TGG | + | chr3.4:2202524-2202543 | None:intergenic | 40.0% |
| !!! | CTTGCGTTACTTTTGAGAGA+TGG | - | chr3.4:2204885-2204904 | MS.gene51469:CDS | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr3.4:2204373-2204392 | MS.gene51469:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3.4:2204392-2204373 | None:intergenic | 40.0% |
| AAAGAGAATCCGTCTCAAGG+AGG | - | chr3.4:2203681-2203700 | MS.gene51469:intron | 45.0% | |
| AAAGGGTAAGGATCAGAGAG+TGG | + | chr3.4:2202071-2202090 | None:intergenic | 45.0% | |
| AAAGTTGACAGCTTCAGCAC+AGG | + | chr3.4:2205649-2205668 | None:intergenic | 45.0% | |
| AACAGTACCTCCACTTCCTT+AGG | + | chr3.4:2204630-2204649 | None:intergenic | 45.0% | |
| AAGCCAAAACCAGCATCACA+AGG | - | chr3.4:2202518-2202537 | MS.gene51469:intron | 45.0% | |
| AAGGGTAAGGATCAGAGAGT+GGG | + | chr3.4:2202070-2202089 | None:intergenic | 45.0% | |
| AATATGCCCTGTGCAGTTTC+TGG | + | chr3.4:2203327-2203346 | None:intergenic | 45.0% | |
| AATGCGTGAACTTGCCAATG+AGG | + | chr3.4:2202282-2202301 | None:intergenic | 45.0% | |
| ACAGCAAATATGGCAACTCG+TGG | + | chr3.4:2202630-2202649 | None:intergenic | 45.0% | |
| ACATGCATTGCTGATGACTC+GGG | + | chr3.4:2202836-2202855 | None:intergenic | 45.0% | |
| ACGGAATGCTTCACGAGAAT+CGG | + | chr3.4:2200717-2200736 | None:intergenic | 45.0% | |
| AGATTGAGTGCTCCTATGGT+TGG | - | chr3.4:2203967-2203986 | MS.gene51469:intron | 45.0% | |
| AGCTCACCAAAGAATCCACA+TGG | - | chr3.4:2202587-2202606 | MS.gene51469:intron | 45.0% | |
| ATCAGCACGGTAACATGTTC+CGG | + | chr3.4:2201880-2201899 | None:intergenic | 45.0% | |
| ATGCGTGAACTTGCCAATGA+GGG | + | chr3.4:2202281-2202300 | None:intergenic | 45.0% | |
| CAAAGGTAGTCAGAAGATGG+TGG | - | chr3.4:2204791-2204810 | MS.gene51469:CDS | 45.0% | |
| CAAATGACTGTCAAGCGAAG+TGG | + | chr3.4:2203034-2203053 | None:intergenic | 45.0% | |
| CACATGCATTGCTGATGACT+CGG | + | chr3.4:2202837-2202856 | None:intergenic | 45.0% | |
| CATAAAGACCAGTAACACCG+CGG | + | chr3.4:2200799-2200818 | None:intergenic | 45.0% | |
| CATCTGTAGCTGTAGAAGAG+TGG | + | chr3.4:2205970-2205989 | None:intergenic | 45.0% | |
| CCAATTTGTGCAGCAGCAAA+GGG | + | chr3.4:2203393-2203412 | None:intergenic | 45.0% | |
| CTACTTAGTGGGATAAGGCT+TGG | + | chr3.4:2201606-2201625 | None:intergenic | 45.0% | |
| GAAACACAACCAACCCTCAT+TGG | - | chr3.4:2202265-2202284 | MS.gene51469:intron | 45.0% | |
| GAATCCACAGTGACAGCAAA+GGG | + | chr3.4:2205812-2205831 | None:intergenic | 45.0% | |
| GAATTGGGCCTTGCATTCAA+AGG | - | chr3.4:2204774-2204793 | MS.gene51469:CDS | 45.0% | |
| GATGCTGCCTAAATCTCAAG+CGG | + | chr3.4:2203902-2203921 | None:intergenic | 45.0% | |
| GCTGTTGTCACGTGATTGAA+AGG | - | chr3.4:2201179-2201198 | MS.gene51469:intron | 45.0% | |
| GTCACGTGATTGAAAGGTCA+CGG | - | chr3.4:2201185-2201204 | MS.gene51469:intron | 45.0% | |
| GTGGCATGTAGATTCATTGG+TGG | + | chr3.4:2202470-2202489 | None:intergenic | 45.0% | |
| GTTCTCGAGCTAAGGCTATT+TGG | + | chr3.4:2202714-2202733 | None:intergenic | 45.0% | |
| TACAAGGCAGAGTAAAGCTG+GGG | - | chr3.4:2205150-2205169 | MS.gene51469:intron | 45.0% | |
| TCACGTGATTGAAAGGTCAC+GGG | - | chr3.4:2201186-2201205 | MS.gene51469:intron | 45.0% | |
| TCAGCAACTTCGGCATACTT+AGG | + | chr3.4:2203610-2203629 | None:intergenic | 45.0% | |
| TCCAATTTGTGCAGCAGCAA+AGG | + | chr3.4:2203394-2203413 | None:intergenic | 45.0% | |
| TGAATCCACAGTGACAGCAA+AGG | + | chr3.4:2205813-2205832 | None:intergenic | 45.0% | |
| TGCAAAGAGAATCCGTCTCA+AGG | - | chr3.4:2203678-2203697 | MS.gene51469:intron | 45.0% | |
| TGCTTTGCAAACAGGACAAG+CGG | - | chr3.4:2202768-2202787 | MS.gene51469:CDS | 45.0% | |
| TGGCAACCTCTTCAAACTTC+TGG | + | chr3.4:2205252-2205271 | None:intergenic | 45.0% | |
| TGGGTTCTTAGTTTCAGGAG+CGG | + | chr3.4:2202051-2202070 | None:intergenic | 45.0% | |
| TTAGATTTAACCGCGCAACC+AGG | + | chr3.4:2200833-2200852 | None:intergenic | 45.0% | |
| TTCAGAACCTAAGGAAGTGG+AGG | - | chr3.4:2204620-2204639 | MS.gene51469:CDS | 45.0% | |
| TTGAAACAGCCTCCTTGAGA+CGG | + | chr3.4:2203693-2203712 | None:intergenic | 45.0% | |
| ! | AATTTTTCGTGAGCCACCAG+CGG | + | chr3.4:2204600-2204619 | None:intergenic | 45.0% |
| ! | ACGAGTTGCCATATTTGCTG+TGG | - | chr3.4:2202629-2202648 | MS.gene51469:CDS | 45.0% |
| ! | AGTGAATTTTTCCACGTGGC+CGG | + | chr3.4:2201832-2201851 | None:intergenic | 45.0% |
| ! | ATGTGATTTGCGTGCTCACT+CGG | - | chr3.4:2204022-2204041 | MS.gene51469:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+AGG | - | chr3.4:2201604-2201623 | MS.gene51469:CDS | 45.0% |
| ! | GAAGCACTTGAGGTAATTCG+TGG | - | chr3.4:2204816-2204835 | MS.gene51469:CDS | 45.0% |
| ! | GAGAGTGGGTTCTTAGTTTC+AGG | + | chr3.4:2202056-2202075 | None:intergenic | 45.0% |
| ! | GATGACTCGGGTATACCTAA+AGG | + | chr3.4:2202824-2202843 | None:intergenic | 45.0% |
| ! | GTTTTTAATGTTCCCGAGGG+AGG | - | chr3.4:2203636-2203655 | MS.gene51469:intron | 45.0% |
| ! | TCTCAAGGAGGCTGTTTCAA+AGG | - | chr3.4:2203693-2203712 | MS.gene51469:intron | 45.0% |
| ! | TGAATTCACGGACTCTGAGA+AGG | + | chr3.4:2203540-2203559 | None:intergenic | 45.0% |
| ! | TGTGGGATTGAGATTTGGTC+TGG | - | chr3.4:2203478-2203497 | MS.gene51469:intron | 45.0% |
| !! | AACCATCCTTTGGGATTGGA+CGG | - | chr3.4:2205095-2205114 | MS.gene51469:intron | 45.0% |
| !! | AGGTTGATGAATCCGGATGT+AGG | + | chr3.4:2204421-2204440 | None:intergenic | 45.0% |
| !! | GAGGGTTGGTTGTGTTTCTA+AGG | + | chr3.4:2202263-2202282 | None:intergenic | 45.0% |
| !! | GGTTGATGAATCCGGATGTA+GGG | + | chr3.4:2204420-2204439 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr3.4:2204372-2204391 | MS.gene51469:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3.4:2204391-2204372 | None:intergenic | 45.0% |
| !!! | TGTGATGCTGGTTTTGGCTT+TGG | + | chr3.4:2202518-2202537 | None:intergenic | 45.0% |
| !! | ATATATATATATAGATTAAA+TGG | - | chr3.4:2205617-2205636 | MS.gene51469:intron | 5.0% |
| ACACATCTTCCCATGTCCTC+TGG | + | chr3.4:2205931-2205950 | None:intergenic | 50.0% | |
| ACGGAGAGATTCTTCGTTGG+TGG | + | chr3.4:2200681-2200700 | None:intergenic | 50.0% | |
| ACTAAAACTCCCGCATACGC+AGG | + | chr3.4:2201297-2201316 | None:intergenic | 50.0% | |
| AGAGGACATGGGAAGATGTG+TGG | - | chr3.4:2205930-2205949 | MS.gene51469:CDS | 50.0% | |
| AGATCACTTCTTGGATGGGC+AGG | - | chr3.4:2205509-2205528 | MS.gene51469:intron | 50.0% | |
| AGCTGTCTCTGTTATTCGGG+AGG | - | chr3.4:2205895-2205914 | MS.gene51469:CDS | 50.0% | |
| ATCCGTCCAATCCCAAAGGA+TGG | + | chr3.4:2205100-2205119 | None:intergenic | 50.0% | |
| ATGCGTCCAGAAACTGCACA+GGG | - | chr3.4:2203318-2203337 | MS.gene51469:CDS | 50.0% | |
| ATTGGATATGAAGGCCGCTC+TGG | - | chr3.4:2204943-2204962 | MS.gene51469:intron | 50.0% | |
| CAGAGTCCGTGAATTCACCT+TGG | - | chr3.4:2203543-2203562 | MS.gene51469:intron | 50.0% | |
| CCAACAGTCAGCGGCATAAT+GGG | + | chr3.4:2203940-2203959 | None:intergenic | 50.0% | |
| CCCTTTGCTGCTGCACAAAT+TGG | - | chr3.4:2203390-2203409 | MS.gene51469:intron | 50.0% | |
| CCTTGAGCAAGTGATCAGCA+CGG | + | chr3.4:2201893-2201912 | None:intergenic | 50.0% | |
| CTAAAACTCCCGCATACGCA+GGG | + | chr3.4:2201296-2201315 | None:intergenic | 50.0% | |
| GAGATGGAATCTTCTCTGGC+AGG | - | chr3.4:2204901-2204920 | MS.gene51469:intron | 50.0% | |
| GAGCATGGTGAGCATTCACA+AGG | - | chr3.4:2205027-2205046 | MS.gene51469:intron | 50.0% | |
| GAGCGACAAGTGAAGGAAAG+CGG | + | chr3.4:2205195-2205214 | None:intergenic | 50.0% | |
| GCAGCATCTTGCCAATGAGA+TGG | - | chr3.4:2203914-2203933 | MS.gene51469:intron | 50.0% | |
| GCATTGTAACTGATTGCCCC+AGG | + | chr3.4:2203198-2203217 | None:intergenic | 50.0% | |
| GCTGAGATTGAGTGCTCCTA+TGG | - | chr3.4:2203963-2203982 | MS.gene51469:intron | 50.0% | |
| GGAACGGAGAGATTCTTCGT+TGG | + | chr3.4:2200684-2200703 | None:intergenic | 50.0% | |
| GTAGCTGTAGAAGAGTGGTG+AGG | + | chr3.4:2205965-2205984 | None:intergenic | 50.0% | |
| GTGAACTTGCCAATGAGGGT+TGG | + | chr3.4:2202277-2202296 | None:intergenic | 50.0% | |
| GTTATTCGGGAGGTAACCGA+AGG | - | chr3.4:2205905-2205924 | MS.gene51469:CDS | 50.0% | |
| TACTAACCCAGGAGCTAAGC+CGG | + | chr3.4:2202126-2202145 | None:intergenic | 50.0% | |
| TGCTGCTGCACAAATTGGAC+AGG | - | chr3.4:2203395-2203414 | MS.gene51469:intron | 50.0% | |
| TTCAGTGACTATCCGGGAGA+GGG | - | chr3.4:2205838-2205857 | MS.gene51469:CDS | 50.0% | |
| ! | AAAATGGTGGGACCCCTTTC+CGG | - | chr3.4:2201269-2201288 | MS.gene51469:intron | 50.0% |
| ! | CCATTATGCCGCTGACTGTT+GGG | - | chr3.4:2203938-2203957 | MS.gene51469:intron | 50.0% |
| ! | GATGGTGGTTGAAGCACTTG+AGG | - | chr3.4:2204806-2204825 | MS.gene51469:CDS | 50.0% |
| ! | GGATCAAGTGCGTGTTGATG+TGG | - | chr3.4:2205868-2205887 | MS.gene51469:CDS | 50.0% |
| ! | GTATGCCGAAGTTGCTGACT+TGG | - | chr3.4:2203612-2203631 | MS.gene51469:intron | 50.0% |
| ! | TCTAAAATCTTCCGGCCACG+TGG | - | chr3.4:2201818-2201837 | MS.gene51469:intron | 50.0% |
| ! | TCTAAGTCGTTGACTGCTGC+TGG | - | chr3.4:2205280-2205299 | MS.gene51469:intron | 50.0% |
| ! | TGTTCTCTCTTTCTGGCGTC+AGG | - | chr3.4:2200853-2200872 | MS.gene51469:CDS | 50.0% |
| !! | AACAACCTCTGGTGTCACAC+AGG | + | chr3.4:2201799-2201818 | None:intergenic | 50.0% |
| !! | ACAACCTCTGGTGTCACACA+GGG | + | chr3.4:2201798-2201817 | None:intergenic | 50.0% |
| !! | GGCATAATGGGCCATCTCAT+TGG | + | chr3.4:2203928-2203947 | None:intergenic | 50.0% |
| AAAAAGTGGCGTTCCGCTGG+TGG | - | chr3.4:2204584-2204603 | MS.gene51469:CDS | 55.0% | |
| AACCGAAGGCCAGAGGACAT+GGG | - | chr3.4:2205919-2205938 | MS.gene51469:CDS | 55.0% | |
| CAAACACGTGCTTGCCATGC+TGG | - | chr3.4:2201974-2201993 | MS.gene51469:intron | 55.0% | |
| CAAACTTCCATCGGTCCCTC+CGG | - | chr3.4:2202104-2202123 | MS.gene51469:intron | 55.0% | |
| CAGACATCTGTTCCTCCCTC+GGG | + | chr3.4:2203651-2203670 | None:intergenic | 55.0% | |
| CATGCGTCCAGAAACTGCAC+AGG | - | chr3.4:2203317-2203336 | MS.gene51469:CDS | 55.0% | |
| CCAGACATCTGTTCCTCCCT+CGG | + | chr3.4:2203652-2203671 | None:intergenic | 55.0% | |
| CCCAACAGTCAGCGGCATAA+TGG | + | chr3.4:2203941-2203960 | None:intergenic | 55.0% | |
| CTCAGCATCCCAACAGTCAG+CGG | + | chr3.4:2203949-2203968 | None:intergenic | 55.0% | |
| CTGCAGATATCTCCCCGTCA+AGG | - | chr3.4:2203514-2203533 | MS.gene51469:intron | 55.0% | |
| CTTCAGTGACTATCCGGGAG+AGG | - | chr3.4:2205837-2205856 | MS.gene51469:CDS | 55.0% | |
| GAATCTCTCCGTTCCGCTTC+CGG | - | chr3.4:2200689-2200708 | MS.gene51469:CDS | 55.0% | |
| GATTTAACCGCGCAACCAGG+AGG | + | chr3.4:2200830-2200849 | None:intergenic | 55.0% | |
| GGAAAAAAGTGGCGTTCCGC+TGG | - | chr3.4:2204581-2204600 | MS.gene51469:CDS | 55.0% | |
| TAACCGAAGGCCAGAGGACA+TGG | - | chr3.4:2205918-2205937 | MS.gene51469:CDS | 55.0% | |
| TGCTTCACGAGAATCGGAGC+CGG | + | chr3.4:2200711-2200730 | None:intergenic | 55.0% | |
| TTATGGTCCTCCTGGTTGCG+CGG | - | chr3.4:2200820-2200839 | MS.gene51469:CDS | 55.0% | |
| TTGTCCCTGTGTGACACCAG+AGG | - | chr3.4:2201791-2201810 | MS.gene51469:intron | 55.0% | |
| ! | ACTCTGAGAAGGCCTTGACG+GGG | + | chr3.4:2203529-2203548 | None:intergenic | 55.0% |
| ! | CCCATTATGCCGCTGACTGT+TGG | - | chr3.4:2203937-2203956 | MS.gene51469:intron | 55.0% |
| ! | CCGTGCTGATCACTTGCTCA+AGG | - | chr3.4:2201890-2201909 | MS.gene51469:CDS | 55.0% |
| ! | GACTCTGAGAAGGCCTTGAC+GGG | + | chr3.4:2203530-2203549 | None:intergenic | 55.0% |
| ! | GGAAAGGGGTCCCACCATTT+TGG | + | chr3.4:2201270-2201289 | None:intergenic | 55.0% |
| ! | GGACTCTGAGAAGGCCTTGA+CGG | + | chr3.4:2203531-2203550 | None:intergenic | 55.0% |
| ! | TTCCCATGTCCTCTGGCCTT+CGG | + | chr3.4:2205924-2205943 | None:intergenic | 55.0% |
| AACCCAGGAGCTAAGCCGGA+GGG | + | chr3.4:2202122-2202141 | None:intergenic | 60.0% | |
| AATCGGAGCCGGAAGCGGAA+CGG | + | chr3.4:2200700-2200719 | None:intergenic | 60.0% | |
| ACGAGAATCGGAGCCGGAAG+CGG | + | chr3.4:2200705-2200724 | None:intergenic | 60.0% | |
| CATACGCAGGGTCCGGAAAG+GGG | + | chr3.4:2201284-2201303 | None:intergenic | 60.0% | |
| CCGAGGGAGGAACAGATGTC+TGG | - | chr3.4:2203649-2203668 | MS.gene51469:intron | 60.0% | |
| CTTTCCGGACCCTGCGTATG+CGG | - | chr3.4:2201284-2201303 | MS.gene51469:intron | 60.0% | |
| GCATACGCAGGGTCCGGAAA+GGG | + | chr3.4:2201285-2201304 | None:intergenic | 60.0% | |
| TAACCCAGGAGCTAAGCCGG+AGG | + | chr3.4:2202123-2202142 | None:intergenic | 60.0% | |
| TATCCGGGAGAGGGACAGCA+AGG | - | chr3.4:2205847-2205866 | MS.gene51469:CDS | 60.0% | |
| TTTCCGGACCCTGCGTATGC+GGG | - | chr3.4:2201285-2201304 | MS.gene51469:intron | 60.0% | |
| ! | CGTGCCCTTTGCTGTCACTG+TGG | - | chr3.4:2205805-2205824 | MS.gene51469:CDS | 60.0% |
| ! | GATCCTTGCTGTCCCTCTCC+CGG | + | chr3.4:2205853-2205872 | None:intergenic | 60.0% |
| ACTCCCGCATACGCAGGGTC+CGG | + | chr3.4:2201291-2201310 | None:intergenic | 65.0% | |
| AGCTAAGCCGGAGGGACCGA+TGG | + | chr3.4:2202114-2202133 | None:intergenic | 65.0% | |
| CGCATACGCAGGGTCCGGAA+AGG | + | chr3.4:2201286-2201305 | None:intergenic | 65.0% | |
| GGGAGGTAACCGAAGGCCAG+AGG | - | chr3.4:2205912-2205931 | MS.gene51469:CDS | 65.0% | |
| GTCCCTCCGGCTTAGCTCCT+GGG | - | chr3.4:2202117-2202136 | MS.gene51469:intron | 65.0% | |
| GGTCCCTCCGGCTTAGCTCC+TGG | - | chr3.4:2202116-2202135 | MS.gene51469:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 2200674 | 2205994 | 2200674 | ID=MS.gene51469 |
| chr3.4 | mRNA | 2200674 | 2205994 | 2200674 | ID=MS.gene51469.t1;Parent=MS.gene51469 |
| chr3.4 | exon | 2205794 | 2205994 | 2205794 | ID=MS.gene51469.t1.exon1;Parent=MS.gene51469.t1 |
| chr3.4 | CDS | 2205794 | 2205994 | 2205794 | ID=cds.MS.gene51469.t1;Parent=MS.gene51469.t1 |
| chr3.4 | exon | 2204530 | 2204912 | 2204530 | ID=MS.gene51469.t1.exon2;Parent=MS.gene51469.t1 |
| chr3.4 | CDS | 2204530 | 2204912 | 2204530 | ID=cds.MS.gene51469.t1;Parent=MS.gene51469.t1 |
| chr3.4 | exon | 2203237 | 2203354 | 2203237 | ID=MS.gene51469.t1.exon3;Parent=MS.gene51469.t1 |
| chr3.4 | CDS | 2203237 | 2203354 | 2203237 | ID=cds.MS.gene51469.t1;Parent=MS.gene51469.t1 |
| chr3.4 | exon | 2202954 | 2203148 | 2202954 | ID=MS.gene51469.t1.exon4;Parent=MS.gene51469.t1 |
| chr3.4 | CDS | 2202954 | 2203148 | 2202954 | ID=cds.MS.gene51469.t1;Parent=MS.gene51469.t1 |
| chr3.4 | exon | 2202625 | 2202849 | 2202625 | ID=MS.gene51469.t1.exon5;Parent=MS.gene51469.t1 |
| chr3.4 | CDS | 2202625 | 2202849 | 2202625 | ID=cds.MS.gene51469.t1;Parent=MS.gene51469.t1 |
| chr3.4 | exon | 2202027 | 2202086 | 2202027 | ID=MS.gene51469.t1.exon6;Parent=MS.gene51469.t1 |
| chr3.4 | CDS | 2202027 | 2202086 | 2202027 | ID=cds.MS.gene51469.t1;Parent=MS.gene51469.t1 |
| chr3.4 | exon | 2201841 | 2201921 | 2201841 | ID=MS.gene51469.t1.exon7;Parent=MS.gene51469.t1 |
| chr3.4 | CDS | 2201841 | 2201921 | 2201841 | ID=cds.MS.gene51469.t1;Parent=MS.gene51469.t1 |
| chr3.4 | exon | 2201340 | 2201745 | 2201340 | ID=MS.gene51469.t1.exon8;Parent=MS.gene51469.t1 |
| chr3.4 | CDS | 2201340 | 2201745 | 2201340 | ID=cds.MS.gene51469.t1;Parent=MS.gene51469.t1 |
| chr3.4 | exon | 2200674 | 2200906 | 2200674 | ID=MS.gene51469.t1.exon9;Parent=MS.gene51469.t1 |
| chr3.4 | CDS | 2200674 | 2200906 | 2200674 | ID=cds.MS.gene51469.t1;Parent=MS.gene51469.t1 |
| Gene Sequence |
| Protein sequence |
