Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52686.t1 | XP_003625299.1 | 93.2 | 264 | 10 | 2 | 1 | 261 | 1 | 259 | 1.50E-132 | 482.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52686.t1 | G7KWA7 | 93.2 | 264 | 10 | 2 | 1 | 261 | 1 | 259 | 1.1e-132 | 482.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051525 | MS.gene52686 | 0.816966 | 4.21E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene52686 | 0.824896 | 6.29E-54 | -1.69E-46 |
| MS.gene055971 | MS.gene52686 | 0.958615 | 1.52E-116 | -1.69E-46 |
| MS.gene05811 | MS.gene52686 | 0.801401 | 9.16E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene52686 | 0.805752 | 1.15E-49 | -1.69E-46 |
| MS.gene060557 | MS.gene52686 | 0.80673 | 7.14E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52686.t1 | MTR_7g093640 | 93.182 | 264 | 10 | 2 | 1 | 261 | 1 | 259 | 3.80e-178 | 490 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52686.t1 | AT2G41950 | 53.333 | 195 | 84 | 1 | 73 | 260 | 71 | 265 | 7.41e-70 | 216 |
Find 47 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGAGAATTCAAGGGTTT+TGG | 0.256792 | 7.2:+15835197 | MS.gene52686:CDS |
| AAGAACATCCTCAAGTTTAA+AGG | 0.259636 | 7.2:-15835427 | None:intergenic |
| AGGTCAGAAATTACTACTTC+TGG | 0.282494 | 7.2:-15836930 | None:intergenic |
| TGAGGATGTTCTTGCTTCAT+TGG | 0.285239 | 7.2:+15835437 | MS.gene52686:CDS |
| AGTTCAGGGAAATGGAATTA+AGG | 0.301525 | 7.2:-15834993 | None:intergenic |
| CTTTGATGTGGCTGAATTTG+TGG | 0.337260 | 7.2:+15836995 | MS.gene52686:CDS |
| TTGTGGTTTGTATTGAAAAC+GGG | 0.351189 | 7.2:-15834953 | None:intergenic |
| AAGAATTCATCGACAAAGAT+TGG | 0.377860 | 7.2:+15835118 | MS.gene52686:CDS |
| ATTGACCGTATTATATCATC+TGG | 0.387173 | 7.2:+15835168 | MS.gene52686:CDS |
| TGGTCAGTGCTTGACTATAC+TGG | 0.395973 | 7.2:+15835138 | MS.gene52686:CDS |
| GAGTTTGTGGATTGTTTAGT+TGG | 0.406284 | 7.2:+15835237 | MS.gene52686:CDS |
| AACTAACCAGGTGAACATTT+CGG | 0.410159 | 7.2:-15835462 | None:intergenic |
| TGGTGGAATTTGCATGGTGG+TGG | 0.415264 | 7.2:-15834928 | None:intergenic |
| AAGTGGTTCTGAAGAGTTTG+TGG | 0.419196 | 7.2:+15835224 | MS.gene52686:CDS |
| GGAAAATTGATGAGAATTCA+AGG | 0.435740 | 7.2:+15835190 | MS.gene52686:CDS |
| GATATAATACGGTCAATGTT+TGG | 0.441601 | 7.2:-15835162 | None:intergenic |
| TGCTTTGCCCTTTAAACTTG+AGG | 0.443940 | 7.2:+15835419 | MS.gene52686:CDS |
| AGAACATCCTCAAGTTTAAA+GGG | 0.444786 | 7.2:-15835426 | None:intergenic |
| AGCTAAAGAAGATGAATTCA+TGG | 0.452626 | 7.2:-15834890 | None:intergenic |
| GAGATTTGATGATGATTTGA+GGG | 0.454324 | 7.2:-15835046 | None:intergenic |
| GGGTGGTGGAAAATGGGTTG+TGG | 0.455723 | 7.2:-15834970 | None:intergenic |
| TAAAGAAACACAACATCAAA+AGG | 0.463883 | 7.2:-15835387 | None:intergenic |
| GTTCAGGGAAATGGAATTAA+GGG | 0.464943 | 7.2:-15834992 | None:intergenic |
| TTCAGTATTTCTCTACCTTG+TGG | 0.465559 | 7.2:-15836888 | None:intergenic |
| GGTCAGAAATTACTACTTCT+GGG | 0.473415 | 7.2:-15836929 | None:intergenic |
| GTTGTGGTTTGTATTGAAAA+CGG | 0.477823 | 7.2:-15834954 | None:intergenic |
| TCAAGTTTAAAGGGCAAAGC+AGG | 0.503741 | 7.2:-15835417 | None:intergenic |
| TGAGATTTGATGATGATTTG+AGG | 0.510757 | 7.2:-15835047 | None:intergenic |
| GGGTGGTGGAATTTGCATGG+TGG | 0.512751 | 7.2:-15834931 | None:intergenic |
| AGCTGCTAATTCCTTTGATG+TGG | 0.512960 | 7.2:+15836983 | MS.gene52686:CDS |
| GATAATATTAAGTGTTGGCA+AGG | 0.531345 | 7.2:+15835333 | MS.gene52686:CDS |
| TTTGTGGATTGTTTAGTTGG+TGG | 0.542847 | 7.2:+15835240 | MS.gene52686:CDS |
| TTTGAGGGTTTGAAGTGAAG+TGG | 0.548659 | 7.2:-15835031 | None:intergenic |
| GAAAATTGATGAGAATTCAA+GGG | 0.549018 | 7.2:+15835191 | MS.gene52686:CDS |
| TTTCTTCAGGGATTGAAACT+GGG | 0.564494 | 7.2:-15835074 | None:intergenic |
| CACAAATTCAGCCACATCAA+AGG | 0.572163 | 7.2:-15836994 | None:intergenic |
| AATATGATAATATTAAGTGT+TGG | 0.576851 | 7.2:+15835328 | MS.gene52686:CDS |
| TGGTGGTGGTGTGAGAATGA+AGG | 0.583844 | 7.2:-15834914 | None:intergenic |
| TATTAAGTGTTGGCAAGGAG+AGG | 0.585342 | 7.2:+15835338 | MS.gene52686:CDS |
| TGTGGTTTGTATTGAAAACG+GGG | 0.588079 | 7.2:-15834952 | None:intergenic |
| TTGGCTCCGAAATGTTCACC+TGG | 0.591346 | 7.2:+15835456 | MS.gene52686:CDS |
| GCTGAATTTGTGGATGAACA+TGG | 0.600819 | 7.2:+15837005 | MS.gene52686:CDS |
| TTCAGGGAAATGGAATTAAG+GGG | 0.628365 | 7.2:-15834991 | None:intergenic |
| TTGACCGTATTATATCATCT+GGG | 0.656909 | 7.2:+15835169 | MS.gene52686:CDS |
| TCAGGGAAATGGAATTAAGG+GGG | 0.657147 | 7.2:-15834990 | None:intergenic |
| GTGGTTTGTATTGAAAACGG+GGG | 0.682598 | 7.2:-15834951 | None:intergenic |
| GTGATTATCAGTCATCCACA+AGG | 0.692175 | 7.2:+15836873 | MS.gene52686:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATGATAATATTAAGTGT+TGG | + | chr7.2:15835328-15835347 | MS.gene52686:CDS | 15.0% |
| !! | ATTGAAATTGAACAATATTT+GGG | + | chr7.2:15835733-15835752 | MS.gene52686:intron | 15.0% |
| !! | TATTGAAATTGAACAATATT+TGG | + | chr7.2:15835732-15835751 | MS.gene52686:intron | 15.0% |
| !! | ACAAAAATATTGTAAAACAG+CGG | - | chr7.2:15835898-15835917 | None:intergenic | 20.0% |
| !! | TTACTATTGTTCCTAAAAAA+TGG | + | chr7.2:15835361-15835380 | MS.gene52686:CDS | 20.0% |
| !!! | AATTTGTTCAAATTAAGCTA+TGG | + | chr7.2:15835856-15835875 | MS.gene52686:intron | 20.0% |
| !!! | CGGTTTATTCTTTTTAATTT+TGG | + | chr7.2:15836829-15836848 | MS.gene52686:intron | 20.0% |
| !!! | GATAACATTTTGTACTAAAT+AGG | + | chr7.2:15835657-15835676 | MS.gene52686:intron | 20.0% |
| !!! | TTTTGTTGTTAGTTTAGTAT+TGG | + | chr7.2:15835506-15835525 | MS.gene52686:intron | 20.0% |
| !!! | TTTTTCTAATTTGTGATGAT+AGG | - | chr7.2:15836221-15836240 | None:intergenic | 20.0% |
| ! | AACTGGCATAATATATAAAC+TGG | - | chr7.2:15836013-15836032 | None:intergenic | 25.0% |
| ! | ACCTTATACATTTGATTATG+AGG | + | chr7.2:15836655-15836674 | MS.gene52686:intron | 25.0% |
| ! | AGTTTCAATATGCAATGAAA+TGG | - | chr7.2:15835561-15835580 | None:intergenic | 25.0% |
| ! | GAAAATTGATGAGAATTCAA+GGG | + | chr7.2:15835191-15835210 | MS.gene52686:CDS | 25.0% |
| ! | GTTTATATATTATGCCAGTT+TGG | + | chr7.2:15836013-15836032 | MS.gene52686:intron | 25.0% |
| ! | TAAAGAAACACAACATCAAA+AGG | - | chr7.2:15835390-15835409 | None:intergenic | 25.0% |
| ! | TAAGATCTCATGAAATTAAC+AGG | - | chr7.2:15836128-15836147 | None:intergenic | 25.0% |
| ! | TGAATATATGTGTTGTCAAT+CGG | + | chr7.2:15835816-15835835 | MS.gene52686:intron | 25.0% |
| !! | ATACTTACTACTCAAGTTTT+AGG | - | chr7.2:15836559-15836578 | None:intergenic | 25.0% |
| !! | CTTTGTAAATGTGTTTTATC+AGG | - | chr7.2:15836957-15836976 | None:intergenic | 25.0% |
| !! | TGAAACAAGAAATTGTTGTT+TGG | + | chr7.2:15836588-15836607 | MS.gene52686:intron | 25.0% |
| !! | TTTTCCCAGATGATATAATA+CGG | - | chr7.2:15835176-15835195 | None:intergenic | 25.0% |
| !!! | AAAAATTGGATTTTGAGTTC+AGG | - | chr7.2:15835011-15835030 | None:intergenic | 25.0% |
| !!! | AAAATTGGATTTTGAGTTCA+GGG | - | chr7.2:15835010-15835029 | None:intergenic | 25.0% |
| !!! | TAATTTTGGTTTTGACATGT+AGG | + | chr7.2:15836843-15836862 | MS.gene52686:intron | 25.0% |
| !!! | TTTTAAAACAGAGTCCAAAA+GGG | + | chr7.2:15836401-15836420 | MS.gene52686:intron | 25.0% |
| !!! | TTTTTAAAACAGAGTCCAAA+AGG | + | chr7.2:15836400-15836419 | MS.gene52686:intron | 25.0% |
| AAGAACATCCTCAAGTTTAA+AGG | - | chr7.2:15835430-15835449 | None:intergenic | 30.0% | |
| AAGAATTCATCGACAAAGAT+TGG | + | chr7.2:15835118-15835137 | MS.gene52686:CDS | 30.0% | |
| ACAGATAAGAAAAACTAACC+AGG | - | chr7.2:15835477-15835496 | None:intergenic | 30.0% | |
| AGAACATCCTCAAGTTTAAA+GGG | - | chr7.2:15835429-15835448 | None:intergenic | 30.0% | |
| ATAGCAATACGATAATGTCA+CGG | - | chr7.2:15835715-15835734 | None:intergenic | 30.0% | |
| ATCTAGCAATGAAAAATGCA+TGG | - | chr7.2:15836706-15836725 | None:intergenic | 30.0% | |
| ATCTCATGAAATTAACAGGT+AGG | - | chr7.2:15836124-15836143 | None:intergenic | 30.0% | |
| ATGCTCTCAATAATCAAAGA+CGG | + | chr7.2:15836809-15836828 | MS.gene52686:intron | 30.0% | |
| ATTGACCGTATTATATCATC+TGG | + | chr7.2:15835168-15835187 | MS.gene52686:CDS | 30.0% | |
| ATTGCATAGTGTTTCATGAA+AGG | - | chr7.2:15836509-15836528 | None:intergenic | 30.0% | |
| ATTTGGATGAGCATTTCAAA+TGG | + | chr7.2:15835968-15835987 | MS.gene52686:intron | 30.0% | |
| CACAAGAAAATCCATTAAGT+TGG | - | chr7.2:15836681-15836700 | None:intergenic | 30.0% | |
| GAAATTGAACAATATTTGGG+TGG | + | chr7.2:15835736-15835755 | MS.gene52686:intron | 30.0% | |
| GATATAATACGGTCAATGTT+TGG | - | chr7.2:15835165-15835184 | None:intergenic | 30.0% | |
| GCCTCATAATCAAATGTATA+AGG | - | chr7.2:15836659-15836678 | None:intergenic | 30.0% | |
| GGAAAATTGATGAGAATTCA+AGG | + | chr7.2:15835190-15835209 | MS.gene52686:CDS | 30.0% | |
| TTGAAGTGAAGTGGAAAAAT+TGG | - | chr7.2:15835025-15835044 | None:intergenic | 30.0% | |
| TTGACCGTATTATATCATCT+GGG | + | chr7.2:15835169-15835188 | MS.gene52686:CDS | 30.0% | |
| ! | AAACTGGCCTAATAGTAAAA+AGG | - | chr7.2:15835997-15836016 | None:intergenic | 30.0% |
| ! | GCTAGATTTTCATTGTGTTT+AGG | + | chr7.2:15836719-15836738 | MS.gene52686:intron | 30.0% |
| ! | GTAAATGTGTTTTATCAGGA+AGG | - | chr7.2:15836953-15836972 | None:intergenic | 30.0% |
| ! | GTTGTGGTTTGTATTGAAAA+CGG | - | chr7.2:15834957-15834976 | None:intergenic | 30.0% |
| ! | TTGTGGTTTGTATTGAAAAC+GGG | - | chr7.2:15834956-15834975 | None:intergenic | 30.0% |
| !! | GAGATTTGATGATGATTTGA+GGG | - | chr7.2:15835049-15835068 | None:intergenic | 30.0% |
| !! | GATAATATTAAGTGTTGGCA+AGG | + | chr7.2:15835333-15835352 | MS.gene52686:CDS | 30.0% |
| !! | TCATGACTCACTTTTGATAT+TGG | + | chr7.2:15835290-15835309 | MS.gene52686:CDS | 30.0% |
| !! | TGAGATTTGATGATGATTTG+AGG | - | chr7.2:15835050-15835069 | None:intergenic | 30.0% |
| !!! | ACTCTGTTTTAAAAAGAGGT+CGG | - | chr7.2:15836395-15836414 | None:intergenic | 30.0% |
| !!! | TAGCTGTTTTGATCAAATCT+AGG | + | chr7.2:15837036-15837055 | MS.gene52686:CDS | 30.0% |
| !!! | TCAAAAGGAGACCATTTTTT+AGG | - | chr7.2:15835375-15835394 | None:intergenic | 30.0% |
| !!! | TTGGACTCTGTTTTAAAAAG+AGG | - | chr7.2:15836399-15836418 | None:intergenic | 30.0% |
| AACTAACCAGGTGAACATTT+CGG | - | chr7.2:15835465-15835484 | None:intergenic | 35.0% | |
| AGGTCAGAAATTACTACTTC+TGG | - | chr7.2:15836933-15836952 | None:intergenic | 35.0% | |
| AGTTCAGGGAAATGGAATTA+AGG | - | chr7.2:15834996-15835015 | None:intergenic | 35.0% | |
| CAATTTAGATTGCGACAACA+AGG | - | chr7.2:15836366-15836385 | None:intergenic | 35.0% | |
| GGTCAGAAATTACTACTTCT+GGG | - | chr7.2:15836932-15836951 | None:intergenic | 35.0% | |
| GGTGGTAGAGAAAGTAATAA+AGG | + | chr7.2:15835754-15835773 | MS.gene52686:intron | 35.0% | |
| GTTCAGGGAAATGGAATTAA+GGG | - | chr7.2:15834995-15835014 | None:intergenic | 35.0% | |
| TATGTGTTGTCAATCGGATA+TGG | + | chr7.2:15835822-15835841 | MS.gene52686:intron | 35.0% | |
| TGAAATGCTCATCCAAATGT+TGG | - | chr7.2:15835966-15835985 | None:intergenic | 35.0% | |
| TGATTATGAGGCCAACTTAA+TGG | + | chr7.2:15836667-15836686 | MS.gene52686:intron | 35.0% | |
| TTAGTGCGTGTTTGAAAATG+CGG | - | chr7.2:15836789-15836808 | None:intergenic | 35.0% | |
| TTCAGGGAAATGGAATTAAG+GGG | - | chr7.2:15834994-15835013 | None:intergenic | 35.0% | |
| TTCAGTATTTCTCTACCTTG+TGG | - | chr7.2:15836891-15836910 | None:intergenic | 35.0% | |
| TTTCTTCAGGGATTGAAACT+GGG | - | chr7.2:15835077-15835096 | None:intergenic | 35.0% | |
| ! | ACATAAGATGCGTTTTCTTC+AGG | - | chr7.2:15835090-15835109 | None:intergenic | 35.0% |
| ! | AGAGGTATAGAAGCATATAG+AGG | - | chr7.2:15836623-15836642 | None:intergenic | 35.0% |
| ! | ATGGCCTCCTTTTTACTATT+AGG | + | chr7.2:15835987-15836006 | MS.gene52686:intron | 35.0% |
| ! | CATAAGATGCGTTTTCTTCA+GGG | - | chr7.2:15835089-15835108 | None:intergenic | 35.0% |
| ! | GAGTTTGTGGATTGTTTAGT+TGG | + | chr7.2:15835237-15835256 | MS.gene52686:CDS | 35.0% |
| ! | TGATGAGAATTCAAGGGTTT+TGG | + | chr7.2:15835197-15835216 | MS.gene52686:CDS | 35.0% |
| ! | TGTGGTTTGTATTGAAAACG+GGG | - | chr7.2:15834955-15834974 | None:intergenic | 35.0% |
| ! | TTTGTGGATTGTTTAGTTGG+TGG | + | chr7.2:15835240-15835259 | MS.gene52686:CDS | 35.0% |
| ! | TTTTCTTCAGGGATTGAAAC+TGG | - | chr7.2:15835078-15835097 | None:intergenic | 35.0% |
| !!! | TTTTGGTTTTGACATGTAGG+TGG | + | chr7.2:15836846-15836865 | MS.gene52686:intron | 35.0% |
| AAAGTAGCAGTTCTGCTTAG+CGG | - | chr7.2:15835637-15835656 | None:intergenic | 40.0% | |
| AATGCTCATCCAAATGTTGG+CGG | - | chr7.2:15835963-15835982 | None:intergenic | 40.0% | |
| AGCTGCTAATTCCTTTGATG+TGG | + | chr7.2:15836983-15837002 | MS.gene52686:CDS | 40.0% | |
| CAATTGTGAATCGCAGATTG+CGG | + | chr7.2:15835582-15835601 | MS.gene52686:intron | 40.0% | |
| CACAAATTCAGCCACATCAA+AGG | - | chr7.2:15836997-15837016 | None:intergenic | 40.0% | |
| CTGGCCTAATAGTAAAAAGG+AGG | - | chr7.2:15835994-15836013 | None:intergenic | 40.0% | |
| CTTGATATTGTAGAGAGACG+CGG | + | chr7.2:15836296-15836315 | MS.gene52686:intron | 40.0% | |
| CTTTGATGTGGCTGAATTTG+TGG | + | chr7.2:15836995-15837014 | MS.gene52686:CDS | 40.0% | |
| GCTGAATTTGTGGATGAACA+TGG | + | chr7.2:15837005-15837024 | MS.gene52686:CDS | 40.0% | |
| GTGATTATCAGTCATCCACA+AGG | + | chr7.2:15836873-15836892 | MS.gene52686:CDS | 40.0% | |
| GTTCAAATTCCGCCAACATT+TGG | + | chr7.2:15835951-15835970 | MS.gene52686:intron | 40.0% | |
| GTTGAAATGCTCATCCAAAC+TGG | - | chr7.2:15836030-15836049 | None:intergenic | 40.0% | |
| TAAGGTGCACTTTGTAGAAG+AGG | - | chr7.2:15836641-15836660 | None:intergenic | 40.0% | |
| TCAAGTTTAAAGGGCAAAGC+AGG | - | chr7.2:15835420-15835439 | None:intergenic | 40.0% | |
| TCAGGGAAATGGAATTAAGG+GGG | - | chr7.2:15834993-15835012 | None:intergenic | 40.0% | |
| TCGCAGATTGCGGAAAATAA+TGG | + | chr7.2:15835592-15835611 | MS.gene52686:intron | 40.0% | |
| TGAGGATGTTCTTGCTTCAT+TGG | + | chr7.2:15835437-15835456 | MS.gene52686:CDS | 40.0% | |
| TGCTTTGCCCTTTAAACTTG+AGG | + | chr7.2:15835419-15835438 | MS.gene52686:CDS | 40.0% | |
| ! | CAACTAAGAGTCTAAGACAG+TGG | - | chr7.2:15836266-15836285 | None:intergenic | 40.0% |
| ! | GTGGTTTGTATTGAAAACGG+GGG | - | chr7.2:15834954-15834973 | None:intergenic | 40.0% |
| ! | TCATACACAATGAGCCCTTT+TGG | - | chr7.2:15836418-15836437 | None:intergenic | 40.0% |
| ! | TTTGAGGGTTTGAAGTGAAG+TGG | - | chr7.2:15835034-15835053 | None:intergenic | 40.0% |
| ! | TTTTATTGTCTCCACTCTCC+AGG | - | chr7.2:15836343-15836362 | None:intergenic | 40.0% |
| !! | AAGTGGTTCTGAAGAGTTTG+TGG | + | chr7.2:15835224-15835243 | MS.gene52686:CDS | 40.0% |
| !! | GTTTTGACATGTAGGTGGAA+GGG | + | chr7.2:15836851-15836870 | MS.gene52686:intron | 40.0% |
| !! | TATTAAGTGTTGGCAAGGAG+AGG | + | chr7.2:15835338-15835357 | MS.gene52686:CDS | 40.0% |
| !!! | CTGTTTTAAAAAGAGGTCGG+CGG | - | chr7.2:15836392-15836411 | None:intergenic | 40.0% |
| !!! | GGATTTTGAGTTCAGGGAAA+TGG | - | chr7.2:15835004-15835023 | None:intergenic | 40.0% |
| !!! | TCAAGGGTTTTGGTTTCAAG+TGG | + | chr7.2:15835207-15835226 | MS.gene52686:CDS | 40.0% |
| AAATGGAATTAAGGGGGTGG+TGG | - | chr7.2:15834987-15835006 | None:intergenic | 45.0% | |
| GTGTTGTCAATCGGATATGG+CGG | + | chr7.2:15835825-15835844 | MS.gene52686:intron | 45.0% | |
| GTTTGTATTGAAAACGGGGG+TGG | - | chr7.2:15834951-15834970 | None:intergenic | 45.0% | |
| TGGTCAGTGCTTGACTATAC+TGG | + | chr7.2:15835138-15835157 | MS.gene52686:CDS | 45.0% | |
| !! | ATTAAGGGGGTGGTGGAAAA+TGG | - | chr7.2:15834980-15834999 | None:intergenic | 45.0% |
| !! | GGTTTTGACATGTAGGTGGA+AGG | + | chr7.2:15836850-15836869 | MS.gene52686:intron | 45.0% |
| !! | TTAAGGGGGTGGTGGAAAAT+GGG | - | chr7.2:15834979-15834998 | None:intergenic | 45.0% |
| ACTCTCCAGGATCACTATCG+AGG | - | chr7.2:15836330-15836349 | None:intergenic | 50.0% | |
| ATGTGCCTCGATAGTGATCC+TGG | + | chr7.2:15836322-15836341 | MS.gene52686:intron | 50.0% | |
| GGGAAATGGAATTAAGGGGG+TGG | - | chr7.2:15834990-15835009 | None:intergenic | 50.0% | |
| GTGCGTGTTTGAAAATGCGG+TGG | - | chr7.2:15836786-15836805 | None:intergenic | 50.0% | |
| TCGATAGTGATCCTGGAGAG+TGG | + | chr7.2:15836329-15836348 | MS.gene52686:intron | 50.0% | |
| TGGTGGAATTTGCATGGTGG+TGG | - | chr7.2:15834931-15834950 | None:intergenic | 50.0% | |
| TGTATTGAAAACGGGGGTGG+TGG | - | chr7.2:15834948-15834967 | None:intergenic | 50.0% | |
| TTGGCTCCGAAATGTTCACC+TGG | + | chr7.2:15835456-15835475 | MS.gene52686:CDS | 50.0% | |
| !! | TGGTGGTGGTGTGAGAATGA+AGG | - | chr7.2:15834917-15834936 | None:intergenic | 50.0% |
| !! | GGGTGGTGGAAAATGGGTTG+TGG | - | chr7.2:15834973-15834992 | None:intergenic | 55.0% |
| !! | GGGTGGTGGAATTTGCATGG+TGG | - | chr7.2:15834934-15834953 | None:intergenic | 55.0% |
| !! | CGGGGGTGGTGGAATTTGCA+TGG | - | chr7.2:15834937-15834956 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 15834892 | 15837064 | 15834892 | ID=MS.gene52686 |
| chr7.2 | mRNA | 15834892 | 15837064 | 15834892 | ID=MS.gene52686.t1;Parent=MS.gene52686 |
| chr7.2 | exon | 15834892 | 15835477 | 15834892 | ID=MS.gene52686.t1.exon1;Parent=MS.gene52686.t1 |
| chr7.2 | CDS | 15834892 | 15835477 | 15834892 | ID=cds.MS.gene52686.t1;Parent=MS.gene52686.t1 |
| chr7.2 | exon | 15836865 | 15837064 | 15836865 | ID=MS.gene52686.t1.exon2;Parent=MS.gene52686.t1 |
| chr7.2 | CDS | 15836865 | 15837064 | 15836865 | ID=cds.MS.gene52686.t1;Parent=MS.gene52686.t1 |
| Gene Sequence |
| Protein sequence |
