Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059946.t1 | RHN63440.1 | 96.1 | 684 | 26 | 1 | 7 | 690 | 58 | 740 | 0.00E+00 | 1301.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059946.t1 | Q9FGS4 | 72.9 | 638 | 165 | 5 | 54 | 688 | 80 | 712 | 2.1e-272 | 939.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059946.t1 | A0A072UQY1 | 96.1 | 684 | 26 | 1 | 7 | 690 | 4 | 686 | 0.0e+00 | 1301.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049757 | MS.gene059946 | 0.800031 | 1.74E-48 | -1.69E-46 |
| MS.gene050553 | MS.gene059946 | 0.802041 | 6.77E-49 | -1.69E-46 |
| MS.gene051360 | MS.gene059946 | 0.804618 | 1.98E-49 | -1.69E-46 |
| MS.gene051521 | MS.gene059946 | 0.823438 | 1.39E-53 | -1.69E-46 |
| MS.gene052469 | MS.gene059946 | 0.814633 | 1.39E-51 | -1.69E-46 |
| MS.gene053169 | MS.gene059946 | 0.813734 | 2.20E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene059946 | 0.825422 | 4.73E-54 | -1.69E-46 |
| MS.gene055539 | MS.gene059946 | 0.832302 | 1.02E-55 | -1.69E-46 |
| MS.gene055892 | MS.gene059946 | 0.830815 | 2.37E-55 | -1.69E-46 |
| MS.gene055893 | MS.gene059946 | 0.810861 | 9.34E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene059946 | 0.808404 | 3.15E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene059946 | 0.817024 | 4.09E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene06260 | 0.853341 | 2.55E-61 | -1.69E-46 |
| MS.gene059946 | MS.gene064519 | 0.802093 | 6.61E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene064837 | 0.824277 | 8.81E-54 | -1.69E-46 |
| MS.gene059946 | MS.gene066406 | 0.818888 | 1.55E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene070790 | 0.819869 | 9.26E-53 | -1.69E-46 |
| MS.gene059946 | MS.gene07137 | 0.806231 | 9.09E-50 | -1.69E-46 |
| MS.gene059946 | MS.gene072070 | 0.818369 | 2.03E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene073486 | 0.828658 | 7.95E-55 | -1.69E-46 |
| MS.gene059946 | MS.gene074163 | 0.841157 | 5.63E-58 | -1.69E-46 |
| MS.gene059946 | MS.gene07615 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene07617 | 0.803741 | 3.02E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene07621 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene07861 | 0.801261 | 9.79E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene07871 | 0.84757 | 1.06E-59 | -1.69E-46 |
| MS.gene059946 | MS.gene08779 | 0.801387 | 9.22E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene09137 | 0.801054 | 1.08E-48 | -1.69E-46 |
| MS.gene059946 | MS.gene09570 | 0.812128 | 4.95E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene09765 | 0.849914 | 2.38E-60 | -1.69E-46 |
| MS.gene059946 | MS.gene09777 | 0.841164 | 5.61E-58 | -1.69E-46 |
| MS.gene059946 | MS.gene20096 | 0.849759 | 2.63E-60 | -1.69E-46 |
| MS.gene059946 | MS.gene20812 | 0.812556 | 3.99E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene21880 | 0.80104 | 1.09E-48 | -1.69E-46 |
| MS.gene059946 | MS.gene22898 | 0.802525 | 5.38E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene28507 | 0.800722 | 1.26E-48 | -1.69E-46 |
| MS.gene059946 | MS.gene30427 | 0.845298 | 4.43E-59 | -1.69E-46 |
| MS.gene059946 | MS.gene32713 | 0.826137 | 3.20E-54 | -1.69E-46 |
| MS.gene059946 | MS.gene35020 | 0.806011 | 1.01E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene36260 | 0.825365 | 4.88E-54 | -1.69E-46 |
| MS.gene059946 | MS.gene36507 | 0.816346 | 5.80E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene37408 | 0.81582 | 7.60E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene39277 | 0.804527 | 2.07E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene41649 | 0.837293 | 5.66E-57 | -1.69E-46 |
| MS.gene059946 | MS.gene42899 | 0.805332 | 1.40E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene42900 | 0.809826 | 1.56E-50 | -1.69E-46 |
| MS.gene059946 | MS.gene44996 | 0.816507 | 5.34E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene47071 | 0.82192 | 3.12E-53 | -1.69E-46 |
| MS.gene059946 | MS.gene48312 | 0.967413 | 3.04E-127 | -1.69E-46 |
| MS.gene059946 | MS.gene49436 | 0.821764 | 3.39E-53 | -1.69E-46 |
| MS.gene059946 | MS.gene52770 | 0.81582 | 7.60E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene55433 | 0.814695 | 1.35E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene56177 | 0.810601 | 1.06E-50 | -1.69E-46 |
| MS.gene059946 | MS.gene57720 | 0.823337 | 1.46E-53 | -1.69E-46 |
| MS.gene059946 | MS.gene60394 | 0.817474 | 3.24E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene61544 | 0.827674 | 1.37E-54 | -1.69E-46 |
| MS.gene059946 | MS.gene63983 | 0.812061 | 5.13E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene64825 | 0.803927 | 2.76E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene65435 | 0.8236 | 1.27E-53 | -1.69E-46 |
| MS.gene059946 | MS.gene69326 | 0.81475 | 1.31E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene70368 | 0.804547 | 2.05E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene75660 | 0.826437 | 2.71E-54 | -1.69E-46 |
| MS.gene059946 | MS.gene77541 | 0.800461 | 1.43E-48 | -1.69E-46 |
| MS.gene059946 | MS.gene78643 | 0.817411 | 3.34E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene79903 | 0.832779 | 7.78E-56 | -1.69E-46 |
| MS.gene059946 | MS.gene80172 | 0.813721 | 2.22E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene81254 | 0.815162 | 1.06E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene86339 | 0.822129 | 2.79E-53 | -1.69E-46 |
| MS.gene059946 | MS.gene88860 | 0.811445 | 6.98E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene89074 | 0.823655 | 1.23E-53 | -1.69E-46 |
| MS.gene059946 | MS.gene90462 | 0.823789 | 1.15E-53 | -1.69E-46 |
| MS.gene059946 | MS.gene94217 | 0.805149 | 1.53E-49 | -1.69E-46 |
| MS.gene059946 | MS.gene94682 | 0.81183 | 5.75E-51 | -1.69E-46 |
| MS.gene059946 | MS.gene98065 | 0.821694 | 3.52E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059946.t1 | MTR_4g104680 | 96.053 | 684 | 26 | 1 | 7 | 690 | 4 | 686 | 0.0 | 1361 |
| MS.gene059946.t1 | MTR_3g086590 | 57.895 | 133 | 55 | 1 | 63 | 194 | 62 | 194 | 4.85e-48 | 167 |
| MS.gene059946.t1 | MTR_1g047990 | 37.226 | 137 | 83 | 3 | 63 | 198 | 79 | 213 | 1.42e-16 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059946.t1 | AT5G50210 | 72.884 | 638 | 165 | 5 | 54 | 688 | 80 | 712 | 0.0 | 979 |
| MS.gene059946.t1 | AT1G67810 | 49.730 | 185 | 74 | 2 | 29 | 195 | 27 | 210 | 2.01e-53 | 185 |
| MS.gene059946.t1 | AT4G26500 | 35.338 | 133 | 81 | 2 | 63 | 193 | 87 | 216 | 5.60e-14 | 74.7 |
Find 163 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCTCCACCTCGAATATTT+TGG | 0.208556 | 8.1:-19817937 | MS.gene059946:CDS |
| TTTGCACATGAGGAACTTTC+AGG | 0.232940 | 8.1:-19817061 | MS.gene059946:intron |
| GTTAAAATGCCTTGGACTTC+AGG | 0.242578 | 8.1:+19819254 | None:intergenic |
| AGACAGGGTTCAAGAATCTT+TGG | 0.276598 | 8.1:-19817904 | MS.gene059946:CDS |
| AAGTTCCTCATGTGCAAAAT+TGG | 0.290006 | 8.1:+19817066 | None:intergenic |
| ATTCTGTTCCTAAAACAAAT+TGG | 0.292543 | 8.1:+19817859 | None:intergenic |
| CCTTGAGAAGAGGACTTTGC+AGG | 0.303264 | 8.1:+19817789 | None:intergenic |
| GGAGCAGGAAATGAAGGTTT+TGG | 0.306958 | 8.1:+19821664 | None:intergenic |
| TGGGCTGTACAGCGAGAGTA+TGG | 0.309210 | 8.1:-19821466 | MS.gene059946:CDS |
| GGGGAGGGTTGTTCCATTCA+TGG | 0.314609 | 8.1:-19817642 | MS.gene059946:CDS |
| TACCAGGAACTGGTCGTTCT+AGG | 0.329579 | 8.1:-19821277 | MS.gene059946:CDS |
| TGACTAGTGAATCAGATATA+TGG | 0.338796 | 8.1:+19819204 | None:intergenic |
| CTCACTTTCACAACCTCTTC+CGG | 0.342370 | 8.1:+19821332 | None:intergenic |
| TTAATCTCACCTTCCCTTCA+CGG | 0.345527 | 8.1:+19821426 | None:intergenic |
| GAAATTGACTCTGACGAAAC+TGG | 0.354905 | 8.1:+19817738 | None:intergenic |
| GGTTTGGGTGCTTGATGGGT+TGG | 0.356345 | 8.1:-19821357 | MS.gene059946:CDS |
| AGCCGCTTCATTCGGTCTGC+TGG | 0.362125 | 8.1:+19821554 | None:intergenic |
| GTGCTGAAGGAGAAGAAAAT+TGG | 0.363638 | 8.1:-19819302 | MS.gene059946:CDS |
| GATTTGAATAGAGGCTGGTT+TGG | 0.370823 | 8.1:+19821695 | None:intergenic |
| GGCAGATTCAGCAGTCAAAA+TGG | 0.377543 | 8.1:-19819180 | MS.gene059946:CDS |
| ATCTGATCAACCAGCTTCTC+AGG | 0.383048 | 8.1:+19816943 | None:intergenic |
| TGCAGCTACCTCTACTTATA+TGG | 0.385223 | 8.1:-19818805 | MS.gene059946:CDS |
| GGTTGAAGAATGAAACGTTT+TGG | 0.385253 | 8.1:+19821716 | None:intergenic |
| TGTTTGGTTTGGGTGCTTGA+TGG | 0.386625 | 8.1:-19821362 | MS.gene059946:CDS |
| TTTGGTTTAAGAACATGGTT+TGG | 0.397764 | 8.1:+19821734 | None:intergenic |
| TCCGCCACGGATTGACCATT+TGG | 0.409638 | 8.1:+19817102 | None:intergenic |
| TCTTTGATTGTTACTGATGA+TGG | 0.410818 | 8.1:-19821158 | MS.gene059946:CDS |
| ACAAAACCTACCTTCATGTA+TGG | 0.422091 | 8.1:+19817603 | None:intergenic |
| ACCCTAGAACGACCAGTTCC+TGG | 0.425445 | 8.1:+19821275 | None:intergenic |
| AATGTTGGTTTACCAGGAAC+TGG | 0.427576 | 8.1:-19821287 | MS.gene059946:CDS |
| GATTTGAGAGATTTGAATAG+AGG | 0.428384 | 8.1:+19821686 | None:intergenic |
| GAAAGTGAGTACTGAGGATT+TGG | 0.429586 | 8.1:-19821318 | MS.gene059946:CDS |
| TTGGTTTAAGAACATGGTTT+GGG | 0.435668 | 8.1:+19821735 | None:intergenic |
| GTAGGTGACGGCAAACTGTT+AGG | 0.438073 | 8.1:+19817181 | None:intergenic |
| GGTCTTAATGTTGGTTTACC+AGG | 0.445477 | 8.1:-19821293 | MS.gene059946:CDS |
| GATGAAGTACAGGTTATTGT+TGG | 0.446010 | 8.1:+19818690 | None:intergenic |
| CCATACCATATGCTCAAATC+AGG | 0.448452 | 8.1:+19818492 | None:intergenic |
| TGGAAAAGCTACGGTGGAGC+AGG | 0.460720 | 8.1:+19821649 | None:intergenic |
| GAGCAGCTGTTAAAATGCCT+TGG | 0.460865 | 8.1:+19819246 | None:intergenic |
| GTTTGGTTTGGGTGCTTGAT+GGG | 0.461263 | 8.1:-19821361 | MS.gene059946:CDS |
| TGAGAGATTTGAATAGAGGC+TGG | 0.462920 | 8.1:+19821690 | None:intergenic |
| AGGAGTTTCAAAGGAGCGAC+AGG | 0.462977 | 8.1:+19821614 | None:intergenic |
| AGAAGCACAGCCACCATGAA+TGG | 0.464643 | 8.1:+19817629 | None:intergenic |
| AAGTGCCTGATTTGAGCATA+TGG | 0.464968 | 8.1:-19818497 | MS.gene059946:CDS |
| AACCGACCTGTAGAATAGTC+TGG | 0.472457 | 8.1:+19818658 | None:intergenic |
| GGTGCTTGATGGGTTGGAAC+CGG | 0.473099 | 8.1:-19821351 | MS.gene059946:CDS |
| CAAAGGAGCGACAGGGTTGG+TGG | 0.480530 | 8.1:+19821622 | None:intergenic |
| GTAGCTACTCCTGGTACAAC+AGG | 0.481220 | 8.1:+19817666 | None:intergenic |
| TGATGATGGTGTTGTTCCTA+AGG | 0.482163 | 8.1:-19821144 | MS.gene059946:CDS |
| AGTGTAGCAGCCGCTTCATT+CGG | 0.484630 | 8.1:+19821546 | None:intergenic |
| TGGTTTGGGTTGATAGAGAG+TGG | 0.488000 | 8.1:+19821749 | None:intergenic |
| CGTTAAAACCAGCTTGATCA+AGG | 0.488925 | 8.1:+19819090 | None:intergenic |
| CGCGCCATCCTTGATCAAGC+TGG | 0.492245 | 8.1:-19819098 | MS.gene059946:CDS |
| TCTCTCCAGGTACCTCAAGA+TGG | 0.493069 | 8.1:+19818006 | None:intergenic |
| TGAGCATATTGGATGTTCTC+TGG | 0.494907 | 8.1:-19818835 | MS.gene059946:CDS |
| TTCAAGTTGCAGACTCCAAA+TGG | 0.497154 | 8.1:-19817117 | MS.gene059946:CDS |
| GATAACATTTGATGAAGTAC+AGG | 0.497912 | 8.1:+19818680 | None:intergenic |
| TTCCCCAATGAGCTAAAAGT+TGG | 0.498614 | 8.1:-19819338 | MS.gene059946:CDS |
| TTTCTTCGTCGGGTAGGTGA+CGG | 0.499826 | 8.1:+19817169 | None:intergenic |
| ACCAGGAACTGGTCGTTCTA+GGG | 0.500442 | 8.1:-19821276 | MS.gene059946:CDS |
| TATAAAGTCCAAAATATTCG+AGG | 0.501825 | 8.1:+19817929 | None:intergenic |
| AGAATGTCGGATGAGCATAT+TGG | 0.504121 | 8.1:-19818846 | MS.gene059946:CDS |
| GATTTGGTAGGTCTTAATGT+TGG | 0.504922 | 8.1:-19821302 | MS.gene059946:CDS |
| GTAACAATCAAAGACGGAAA+AGG | 0.507347 | 8.1:+19821167 | None:intergenic |
| GCAGTCAAAATGGCAAAAGC+TGG | 0.511039 | 8.1:-19819170 | MS.gene059946:CDS |
| TGATGGGTTGGAACCGGAAG+AGG | 0.512717 | 8.1:-19821345 | MS.gene059946:CDS |
| TGAAGGGAAGGTGAGATTAA+CGG | 0.517092 | 8.1:-19821423 | MS.gene059946:CDS |
| GCCAATGAAAACATCTCTCC+AGG | 0.517924 | 8.1:+19817993 | None:intergenic |
| ATCATGCTTCCTGTTGTACC+AGG | 0.518289 | 8.1:-19817675 | MS.gene059946:CDS |
| GAATCAGATATATGGATATG+AGG | 0.520531 | 8.1:+19819212 | None:intergenic |
| CGGTCATTACTGTCATCTGT+TGG | 0.522020 | 8.1:+19818430 | None:intergenic |
| CGCAGGGCTAACACCACCTA+TGG | 0.523956 | 8.1:-19821522 | MS.gene059946:CDS |
| TTGTACCAGGAGTAGCTACC+GGG | 0.525696 | 8.1:-19817662 | MS.gene059946:CDS |
| CTCTCCAGGTACCTCAAGAT+GGG | 0.525738 | 8.1:+19818007 | None:intergenic |
| ATGCAAATTCATAACAGTGC+TGG | 0.527687 | 8.1:-19819147 | MS.gene059946:CDS |
| CCCTCCCCGGTAGCTACTCC+TGG | 0.528250 | 8.1:+19817657 | None:intergenic |
| TACGGTGGAGCAGGAAATGA+AGG | 0.530277 | 8.1:+19821658 | None:intergenic |
| GTATGGGCCTGATTCTTACA+TGG | 0.530520 | 8.1:-19818475 | MS.gene059946:CDS |
| TGTTATCCAGACTATTCTAC+AGG | 0.531044 | 8.1:-19818664 | MS.gene059946:intron |
| TGTTGACACGAACCGAGTCA+TGG | 0.538158 | 8.1:-19821486 | MS.gene059946:CDS |
| ATTAACGGCGGATAGTGATT+CGG | 0.540324 | 8.1:-19821408 | MS.gene059946:CDS |
| GCTTCAGCATAACTACCCTT+AGG | 0.540381 | 8.1:+19821128 | None:intergenic |
| CTGATTTGAGCATATGGTAT+GGG | 0.543849 | 8.1:-19818491 | MS.gene059946:CDS |
| GTACCTCAAGATGGGCAGTA+AGG | 0.545529 | 8.1:+19818015 | None:intergenic |
| GGTTGCTGAGAGAGAAGGGA+AGG | 0.547309 | 8.1:-19821201 | MS.gene059946:CDS |
| TATGGGCCTGATTCTTACAT+GGG | 0.548581 | 8.1:-19818474 | MS.gene059946:CDS |
| TATATCTGATTCACTAGTCA+TGG | 0.550454 | 8.1:-19819201 | MS.gene059946:CDS |
| GACAGTAATGACCGATGAAG+AGG | 0.550512 | 8.1:-19818421 | MS.gene059946:CDS |
| ATTCATAACAGTGCTGGGTG+TGG | 0.552603 | 8.1:-19819141 | MS.gene059946:CDS |
| GGTCAATCCGTGGCGGACGT+AGG | 0.555795 | 8.1:-19817096 | MS.gene059946:CDS |
| AAGCGGCTGCTACACTACGC+AGG | 0.556144 | 8.1:-19821539 | MS.gene059946:CDS |
| ACTGCCCATCTTGAGGTACC+TGG | 0.558961 | 8.1:-19818011 | MS.gene059946:CDS |
| GGTTATAGTAGTTGCAGCCA+TGG | 0.559904 | 8.1:+19821781 | None:intergenic |
| ACAGAGTCTACATTGTGCGC+AGG | 0.562187 | 8.1:+19818384 | None:intergenic |
| GTTGACACGAACCGAGTCAT+GGG | 0.562213 | 8.1:-19821485 | MS.gene059946:CDS |
| AATTGGTTGCTGAGAGAGAA+GGG | 0.566535 | 8.1:-19821205 | MS.gene059946:CDS |
| TGCAAATTCATAACAGTGCT+GGG | 0.566616 | 8.1:-19819146 | MS.gene059946:CDS |
| GAAACTCCTCCGTCGTCTCG+CGG | 0.567242 | 8.1:-19821600 | MS.gene059946:CDS |
| ACACGCGATGTCTCCTCCAT+AGG | 0.569627 | 8.1:+19821506 | None:intergenic |
| GGCAATGGAAGCAAAGAGAA+GGG | 0.571709 | 8.1:-19817973 | MS.gene059946:CDS |
| ATGAATGGAACAACCCTCCC+CGG | 0.571761 | 8.1:+19817644 | None:intergenic |
| GATAGAGAGTGGAAACAGAG+AGG | 0.572449 | 8.1:+19821760 | None:intergenic |
| TATCGCAGCAACCTCTTCAT+CGG | 0.572717 | 8.1:+19818410 | None:intergenic |
| CGCGATGTCTCCTCCATAGG+TGG | 0.574176 | 8.1:+19821509 | None:intergenic |
| ACTTCAACTGAATTTAGACT+CGG | 0.574550 | 8.1:+19817705 | None:intergenic |
| GGGTAGTTATGCTGAAGCCC+AGG | 0.575484 | 8.1:-19821123 | MS.gene059946:intron |
| ATTCCTTACTGCCCATCTTG+AGG | 0.578346 | 8.1:-19818018 | MS.gene059946:CDS |
| GTTGTACCAGGAGTAGCTAC+CGG | 0.579533 | 8.1:-19817663 | MS.gene059946:CDS |
| GAAGATCGACCGTGAAGGGA+AGG | 0.579807 | 8.1:-19821435 | MS.gene059946:CDS |
| AGGTGAAGATCGACCGTGAA+GGG | 0.584569 | 8.1:-19821439 | MS.gene059946:CDS |
| TAACAGCTGCTCAGAAGCAG+TGG | 0.584641 | 8.1:-19819235 | MS.gene059946:CDS |
| AGCCAGCAGACCGAATGAAG+CGG | 0.585883 | 8.1:-19821556 | MS.gene059946:CDS |
| CCTGCAAAGTCCTCTTCTCA+AGG | 0.587449 | 8.1:-19817789 | MS.gene059946:CDS |
| CAATTGGTTGCTGAGAGAGA+AGG | 0.587629 | 8.1:-19821206 | MS.gene059946:CDS |
| TGCTTCTTGTCCATACATGA+AGG | 0.588521 | 8.1:-19817613 | MS.gene059946:intron |
| AAAACCAGCTTGATCAAGGA+TGG | 0.589043 | 8.1:+19819094 | None:intergenic |
| CTTCAACTGAATTTAGACTC+GGG | 0.590743 | 8.1:+19817706 | None:intergenic |
| ATGGGCCTGATTCTTACATG+GGG | 0.593015 | 8.1:-19818473 | MS.gene059946:CDS |
| TTCACATCCTACGTCCGCCA+CGG | 0.594227 | 8.1:+19817089 | None:intergenic |
| AGACGACGGAGGAGTTTCAA+AGG | 0.595580 | 8.1:+19821605 | None:intergenic |
| CAACACTAAATTAGAAACAA+AGG | 0.597753 | 8.1:-19818733 | MS.gene059946:CDS |
| AAGATACTCCATATAAGTAG+AGG | 0.599338 | 8.1:+19818797 | None:intergenic |
| AAAGAAGTAGACTTAGAAGC+TGG | 0.599596 | 8.1:+19818771 | None:intergenic |
| TGGCAATGGAAGCAAAGAGA+AGG | 0.600814 | 8.1:-19817974 | MS.gene059946:CDS |
| CCTGATTTGAGCATATGGTA+TGG | 0.601263 | 8.1:-19818492 | MS.gene059946:CDS |
| ACCTTAAAATAGTGAAGTCG+TGG | 0.606778 | 8.1:+19818348 | None:intergenic |
| GATGATGGTGTTGTTCCTAA+GGG | 0.610414 | 8.1:-19821143 | MS.gene059946:CDS |
| GTGAGTACTGAGGATTTGGT+AGG | 0.611581 | 8.1:-19821314 | MS.gene059946:CDS |
| AGTGATTCGGAGATAACGAA+AGG | 0.615615 | 8.1:-19821395 | MS.gene059946:CDS |
| TCGCTGTACAGCCCATGACT+CGG | 0.618275 | 8.1:+19821474 | None:intergenic |
| GAAACTCCTCCGCGAGACGA+CGG | 0.619101 | 8.1:+19821591 | None:intergenic |
| AGTCTAAATTCAGTTGAAGT+CGG | 0.620202 | 8.1:-19817702 | MS.gene059946:CDS |
| TGAACTAGTCAATGTGCTGA+AGG | 0.626645 | 8.1:-19819315 | MS.gene059946:CDS |
| GACTCCAAATGGTCAATCCG+TGG | 0.626715 | 8.1:-19817106 | MS.gene059946:CDS |
| TTTCAAAGGAGCGACAGGGT+TGG | 0.627010 | 8.1:+19821619 | None:intergenic |
| TTCAACTGAATTTAGACTCG+GGG | 0.629858 | 8.1:+19817707 | None:intergenic |
| AAAGTCCAAAATATTCGAGG+TGG | 0.631656 | 8.1:+19817932 | None:intergenic |
| CCAGGAGTAGCTACCGGGGA+GGG | 0.632115 | 8.1:-19817657 | MS.gene059946:CDS |
| CTGTACAGCGAGAGTATGGG+TGG | 0.635356 | 8.1:-19821462 | MS.gene059946:CDS |
| GGGCTGTACAGCGAGAGTAT+GGG | 0.637385 | 8.1:-19821465 | MS.gene059946:CDS |
| TACAGCGAGAGTATGGGTGG+AGG | 0.640194 | 8.1:-19821459 | MS.gene059946:CDS |
| AGGGCTAACACCACCTATGG+AGG | 0.642582 | 8.1:-19821519 | MS.gene059946:CDS |
| AGCGGCTGCTACACTACGCA+GGG | 0.644427 | 8.1:-19821538 | MS.gene059946:CDS |
| GGAGTTTCAAAGGAGCGACA+GGG | 0.646874 | 8.1:+19821615 | None:intergenic |
| CAATGGAAGCAAAGAGAAGG+GGG | 0.651997 | 8.1:-19817971 | MS.gene059946:CDS |
| ACTCCTCCGTCGTCTCGCGG+AGG | 0.652861 | 8.1:-19821597 | MS.gene059946:CDS |
| TCATCAGTAACAATCAAAGA+CGG | 0.655468 | 8.1:+19821161 | None:intergenic |
| GAGGTGAAGATCGACCGTGA+AGG | 0.655638 | 8.1:-19821440 | MS.gene059946:CDS |
| GGTTGACGTGTATAGAATGT+CGG | 0.656142 | 8.1:-19818859 | MS.gene059946:CDS |
| GGTTGTGAAAGTGAGTACTG+AGG | 0.656975 | 8.1:-19821324 | MS.gene059946:CDS |
| GCAATGGAAGCAAAGAGAAG+GGG | 0.657387 | 8.1:-19817972 | MS.gene059946:CDS |
| TACATGGATCCTGAAGTCCA+AGG | 0.660452 | 8.1:-19819263 | MS.gene059946:CDS |
| TTTGGACTTTATAAAAGACA+GGG | 0.664157 | 8.1:-19817919 | MS.gene059946:CDS |
| ACTCCTCCGCGAGACGACGG+AGG | 0.664739 | 8.1:+19821594 | None:intergenic |
| GTCGTTCTAGGGTGAATACG+TGG | 0.666480 | 8.1:-19821265 | MS.gene059946:CDS |
| GATTACTGCAATTGTCGCAG+CGG | 0.667769 | 8.1:-19817829 | MS.gene059946:CDS |
| GCTGGGTGTGGATTTCATGT+CGG | 0.668987 | 8.1:-19819129 | MS.gene059946:CDS |
| TCCAAATGGTCAATCCGTGG+CGG | 0.714010 | 8.1:-19817103 | MS.gene059946:CDS |
| GAGGGTTGTTCCATTCATGG+TGG | 0.715274 | 8.1:-19817639 | MS.gene059946:CDS |
| ACCAGGAGTAGCTACCGGGG+AGG | 0.721609 | 8.1:-19817658 | MS.gene059946:CDS |
| AGGGAAGGTGAGATTAACGG+CGG | 0.747863 | 8.1:-19821420 | MS.gene059946:CDS |
| TGGGCCTGATTCTTACATGG+GGG | 0.757861 | 8.1:-19818472 | MS.gene059946:CDS |
| TGTACCAGGAGTAGCTACCG+GGG | 0.783130 | 8.1:-19817661 | MS.gene059946:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAATACAGAAAAA+TGG | + | chr8.1:19819146-19819165 | None:intergenic | 10.0% |
| !! | AATATTAAATAATTGGATAT+TGG | - | chr8.1:19817922-19817941 | MS.gene059946:CDS | 10.0% |
| !! | ATATTAAATAATTGGATATT+GGG | - | chr8.1:19817923-19817942 | MS.gene059946:CDS | 10.0% |
| !!! | ATTTTTCTGTATTTATATTT+TGG | - | chr8.1:19819145-19819164 | MS.gene059946:CDS | 10.0% |
| !! | AAAAACTTTATTGAATAGAA+TGG | + | chr8.1:19820542-19820561 | None:intergenic | 15.0% |
| !! | AACTTGAAAAATGTATTTAT+AGG | - | chr8.1:19818873-19818892 | MS.gene059946:intron | 15.0% |
| !! | ATAAAAATATTTGTGTTTCA+TGG | - | chr8.1:19819182-19819201 | MS.gene059946:CDS | 15.0% |
| !! | GGAAAAAAAATATGAAAAAA+TGG | + | chr8.1:19820509-19820528 | None:intergenic | 15.0% |
| !! | TTTAAATTTATTATCGACAT+CGG | + | chr8.1:19817697-19817716 | None:intergenic | 15.0% |
| !! | AAAGGTTAATTAAAACTACA+TGG | + | chr8.1:19821717-19821736 | None:intergenic | 20.0% |
| !! | AAGGTTAATTAAAACTACAT+GGG | + | chr8.1:19821716-19821735 | None:intergenic | 20.0% |
| !! | ATGTTTGTTTATATTGTTGT+TGG | - | chr8.1:19818059-19818078 | MS.gene059946:CDS | 20.0% |
| !! | ATTAGAAGTTTAATACTTTC+AGG | + | chr8.1:19819318-19819337 | None:intergenic | 20.0% |
| !! | CATATAAGTGTTTAAACATA+AGG | + | chr8.1:19821365-19821384 | None:intergenic | 20.0% |
| !! | CATTTATTTACAAGTTAAAC+CGG | - | chr8.1:19817838-19817857 | MS.gene059946:CDS | 20.0% |
| !! | CTTATGTTTAAACACTTATA+TGG | - | chr8.1:19821363-19821382 | MS.gene059946:CDS | 20.0% |
| !! | GCTAAATTTATAATCAACTT+AGG | - | chr8.1:19821150-19821169 | MS.gene059946:CDS | 20.0% |
| !! | TATAATTGTTTATCCAAACA+GGG | - | chr8.1:19821399-19821418 | MS.gene059946:CDS | 20.0% |
| !! | TTATCATCCTTGATTAATAT+GGG | + | chr8.1:19819022-19819041 | None:intergenic | 20.0% |
| !! | TTCTATTACTGTTATCATTA+GGG | - | chr8.1:19817988-19818007 | MS.gene059946:CDS | 20.0% |
| !! | TTGAAAAATGTATTTATAGG+TGG | - | chr8.1:19818876-19818895 | MS.gene059946:intron | 20.0% |
| !! | TTTATCATCCTTGATTAATA+TGG | + | chr8.1:19819023-19819042 | None:intergenic | 20.0% |
| !!! | GTATTTTTAACAATACTTTC+CGG | - | chr8.1:19818453-19818472 | MS.gene059946:CDS | 20.0% |
| !!! | TCAAATTCTAAGATAGTTTA+AGG | - | chr8.1:19818958-19818977 | MS.gene059946:intron | 20.0% |
| !!! | TGTAGTTTTAATTAACCTTT+TGG | - | chr8.1:19821717-19821736 | MS.gene059946:CDS | 20.0% |
| ! | AAAAATGTATTTATAGGTGG+TGG | - | chr8.1:19818879-19818898 | MS.gene059946:intron | 25.0% |
| ! | AATATGCTGAAAACATTGTA+TGG | + | chr8.1:19821253-19821272 | None:intergenic | 25.0% |
| ! | AATCAAGGATGATAAAGAAA+TGG | - | chr8.1:19819027-19819046 | MS.gene059946:intron | 25.0% |
| ! | AGGTTAATTAAAACTACATG+GGG | + | chr8.1:19821715-19821734 | None:intergenic | 25.0% |
| ! | ATATAGAATCTCTCCAAAAA+AGG | - | chr8.1:19818342-19818361 | MS.gene059946:intron | 25.0% |
| ! | ATCAAGGATGATAAAGAAAT+GGG | - | chr8.1:19819028-19819047 | MS.gene059946:intron | 25.0% |
| ! | ATTCTGTTCCTAAAACAAAT+TGG | + | chr8.1:19820853-19820872 | None:intergenic | 25.0% |
| ! | CAACACTAAATTAGAAACAA+AGG | - | chr8.1:19819976-19819995 | MS.gene059946:intron | 25.0% |
| ! | CTATAATTGTTTATCCAAAC+AGG | - | chr8.1:19821398-19821417 | MS.gene059946:CDS | 25.0% |
| ! | GATAAATATATGTGCTTCAT+TGG | - | chr8.1:19817796-19817815 | MS.gene059946:CDS | 25.0% |
| ! | GCACATATATTTATCAGATT+AGG | + | chr8.1:19817791-19817810 | None:intergenic | 25.0% |
| ! | GTGCAAAATATTGAAGTAAA+AGG | + | chr8.1:19818596-19818615 | None:intergenic | 25.0% |
| ! | GTTATTTGAGTCTATCTATT+GGG | - | chr8.1:19818772-19818791 | MS.gene059946:CDS | 25.0% |
| ! | GTTCTATTACTGTTATCATT+AGG | - | chr8.1:19817987-19818006 | MS.gene059946:CDS | 25.0% |
| ! | TATAAAGTCCAAAATATTCG+AGG | + | chr8.1:19820783-19820802 | None:intergenic | 25.0% |
| ! | TATAGAATCTCTCCAAAAAA+GGG | - | chr8.1:19818343-19818362 | MS.gene059946:intron | 25.0% |
| ! | TCATTTATCTCTACTATAAC+AGG | + | chr8.1:19818503-19818522 | None:intergenic | 25.0% |
| ! | TTACTTCACATTATGATGAA+TGG | - | chr8.1:19819248-19819267 | MS.gene059946:CDS | 25.0% |
| ! | TTGTTATCTTAGGATATTAG+TGG | - | chr8.1:19818287-19818306 | MS.gene059946:intron | 25.0% |
| ! | TTTGGACTTTATAAAAGACA+GGG | - | chr8.1:19820790-19820809 | MS.gene059946:intron | 25.0% |
| !! | ACTTTCCTATTCAATTTTGT+AGG | - | chr8.1:19818716-19818735 | MS.gene059946:CDS | 25.0% |
| !! | ATATTTATCTCCTTTTATGC+AGG | - | chr8.1:19820180-19820199 | MS.gene059946:intron | 25.0% |
| !! | CTTTCCTATTCAATTTTGTA+GGG | - | chr8.1:19818717-19818736 | MS.gene059946:CDS | 25.0% |
| !! | TCGTACAAAATTGACTTATA+AGG | + | chr8.1:19818922-19818941 | None:intergenic | 25.0% |
| !! | TGATACTTGTTAATCTTTAG+CGG | - | chr8.1:19819802-19819821 | MS.gene059946:intron | 25.0% |
| !! | TGTTATTTGAGTCTATCTAT+TGG | - | chr8.1:19818771-19818790 | MS.gene059946:CDS | 25.0% |
| !! | TTTCTTGTATTCACCATTTT+AGG | - | chr8.1:19820464-19820483 | MS.gene059946:intron | 25.0% |
| !! | TTTTGGACTTTATAAAAGAC+AGG | - | chr8.1:19820789-19820808 | MS.gene059946:intron | 25.0% |
| !!! | GAGGTTTTAAGTATTTCTTT+TGG | - | chr8.1:19819116-19819135 | MS.gene059946:CDS | 25.0% |
| !!! | GTCTTAATTTGTTAAAACAC+CGG | + | chr8.1:19818475-19818494 | None:intergenic | 25.0% |
| !!! | TGAATTTTGAGTTTGATCTT+GGG | + | chr8.1:19818123-19818142 | None:intergenic | 25.0% |
| !!! | TTCTGTTTTTATCTTGATTG+TGG | - | chr8.1:19818526-19818545 | MS.gene059946:intron | 25.0% |
| !!! | TTGAATTTTGAGTTTGATCT+TGG | + | chr8.1:19818124-19818143 | None:intergenic | 25.0% |
| AAAACCTCAATTCCTGTATA+GGG | + | chr8.1:19819104-19819123 | None:intergenic | 30.0% | |
| AAATAAAGACAGTACTAACC+TGG | + | chr8.1:19817607-19817626 | None:intergenic | 30.0% | |
| AAGATACTCCATATAAGTAG+AGG | + | chr8.1:19819915-19819934 | None:intergenic | 30.0% | |
| AATAAAGACAGTACTAACCT+GGG | + | chr8.1:19817606-19817625 | None:intergenic | 30.0% | |
| ACATTATGATGAATGGATCA+TGG | - | chr8.1:19819255-19819274 | MS.gene059946:CDS | 30.0% | |
| ACTTCAACTGAATTTAGACT+CGG | + | chr8.1:19821007-19821026 | None:intergenic | 30.0% | |
| AGTCTAAATTCAGTTGAAGT+CGG | - | chr8.1:19821007-19821026 | MS.gene059946:intron | 30.0% | |
| AGTGATTAACACATACATCA+GGG | - | chr8.1:19818085-19818104 | MS.gene059946:CDS | 30.0% | |
| ATAAGCATCAAATTCTTGCA+AGG | + | chr8.1:19818398-19818417 | None:intergenic | 30.0% | |
| ATAATCAACTTAGGTCTGTT+TGG | - | chr8.1:19821159-19821178 | MS.gene059946:CDS | 30.0% | |
| ATTACTGTTATCATTAGGGA+GGG | - | chr8.1:19817992-19818011 | MS.gene059946:CDS | 30.0% | |
| ATTGAAGTAAAAGGACCATT+AGG | + | chr8.1:19818587-19818606 | None:intergenic | 30.0% | |
| CAAAATTGAATAGGAAAGTG+AGG | + | chr8.1:19818715-19818734 | None:intergenic | 30.0% | |
| CAATGATCCCATATTAATCA+AGG | - | chr8.1:19819012-19819031 | MS.gene059946:intron | 30.0% | |
| CTCTATTACTGAGCAAATTA+AGG | + | chr8.1:19821425-19821444 | None:intergenic | 30.0% | |
| GAATCAGATATATGGATATG+AGG | + | chr8.1:19819500-19819519 | None:intergenic | 30.0% | |
| GATAACATTTGATGAAGTAC+AGG | + | chr8.1:19820032-19820051 | None:intergenic | 30.0% | |
| GATTTGAGAGATTTGAATAG+AGG | + | chr8.1:19817026-19817045 | None:intergenic | 30.0% | |
| GCAAAAAAAGACGAAACAAT+TGG | - | chr8.1:19817487-19817506 | MS.gene059946:intron | 30.0% | |
| GCTAAAAGAATTCATCTGAA+AGG | + | chr8.1:19821503-19821522 | None:intergenic | 30.0% | |
| TAAAACCTCAATTCCTGTAT+AGG | + | chr8.1:19819105-19819124 | None:intergenic | 30.0% | |
| TACACTAGATTAGCAGAATT+TGG | - | chr8.1:19819773-19819792 | MS.gene059946:intron | 30.0% | |
| TAGTGATTAACACATACATC+AGG | - | chr8.1:19818084-19818103 | MS.gene059946:CDS | 30.0% | |
| TATATCTGATTCACTAGTCA+TGG | - | chr8.1:19819508-19819527 | MS.gene059946:intron | 30.0% | |
| TATCTTAGGATATTAGTGGT+GGG | - | chr8.1:19818291-19818310 | MS.gene059946:intron | 30.0% | |
| TATTACTGTTATCATTAGGG+AGG | - | chr8.1:19817991-19818010 | MS.gene059946:CDS | 30.0% | |
| TCAACCCTACAAAATTGAAT+AGG | + | chr8.1:19818724-19818743 | None:intergenic | 30.0% | |
| TCAACTTAAAATGCACTCAA+GGG | - | chr8.1:19818140-19818159 | MS.gene059946:intron | 30.0% | |
| TCATCAGTAACAATCAAAGA+CGG | + | chr8.1:19817551-19817570 | None:intergenic | 30.0% | |
| TCTTTGATTGTTACTGATGA+TGG | - | chr8.1:19817551-19817570 | MS.gene059946:intron | 30.0% | |
| TGACTAGTGAATCAGATATA+TGG | + | chr8.1:19819508-19819527 | None:intergenic | 30.0% | |
| TTATCTTAGGATATTAGTGG+TGG | - | chr8.1:19818290-19818309 | MS.gene059946:intron | 30.0% | |
| TTCAACTTAAAATGCACTCA+AGG | - | chr8.1:19818139-19818158 | MS.gene059946:intron | 30.0% | |
| TTCAGCATACTTATATGTGT+CGG | - | chr8.1:19817730-19817749 | MS.gene059946:CDS | 30.0% | |
| TTGGTTTAAGAACATGGTTT+GGG | + | chr8.1:19816977-19816996 | None:intergenic | 30.0% | |
| TTTCTCTGATGATTATTTGC+AGG | - | chr8.1:19819829-19819848 | MS.gene059946:intron | 30.0% | |
| ! | TGCATTGTTCATCATCTTTT+TGG | - | chr8.1:19820626-19820645 | MS.gene059946:intron | 30.0% |
| ! | TTGTCTTTTGTGTGTAAGTA+TGG | + | chr8.1:19818995-19819014 | None:intergenic | 30.0% |
| ! | TTTGGTTTAAGAACATGGTT+TGG | + | chr8.1:19816978-19816997 | None:intergenic | 30.0% |
| !! | ATGAGGACATTTGTTATCTT+AGG | - | chr8.1:19818277-19818296 | MS.gene059946:intron | 30.0% |
| !! | CAGTAAAACTAGCTTTATTG+TGG | + | chr8.1:19820142-19820161 | None:intergenic | 30.0% |
| !! | GATCATCTCCAATTTGTTTT+AGG | - | chr8.1:19820842-19820861 | MS.gene059946:intron | 30.0% |
| !! | TAATACTTTTTGCATAGCGA+TGG | + | chr8.1:19819689-19819708 | None:intergenic | 30.0% |
| !! | TAATTTGCTCAGTAATAGAG+CGG | - | chr8.1:19821425-19821444 | MS.gene059946:CDS | 30.0% |
| !! | TCGCTATGCAAAAAGTATTA+TGG | - | chr8.1:19819689-19819708 | MS.gene059946:intron | 30.0% |
| !!! | AACGTTTTGGTTTAAGAACA+TGG | + | chr8.1:19816983-19817002 | None:intergenic | 30.0% |
| !!! | GACTTCACTATTTTAAGGTA+AGG | - | chr8.1:19820365-19820384 | MS.gene059946:intron | 30.0% |
| !!! | TTGTTTTAGGAACAGAATCT+GGG | - | chr8.1:19820855-19820874 | MS.gene059946:intron | 30.0% |
| !!! | TTTGTTTTAGGAACAGAATC+TGG | - | chr8.1:19820854-19820873 | MS.gene059946:intron | 30.0% |
| !!! | TTTTTGTCTAGCTTTCTTGT+AGG | - | chr8.1:19819337-19819356 | MS.gene059946:CDS | 30.0% |
| AAAGAAGTAGACTTAGAAGC+TGG | + | chr8.1:19819941-19819960 | None:intergenic | 35.0% | |
| AAAGTCCAAAATATTCGAGG+TGG | + | chr8.1:19820780-19820799 | None:intergenic | 35.0% | |
| AACAAATGTCCTCATAGCAT+AGG | + | chr8.1:19818272-19818291 | None:intergenic | 35.0% | |
| AAGTTCCTCATGTGCAAAAT+TGG | + | chr8.1:19821646-19821665 | None:intergenic | 35.0% | |
| ACAAAACCTACCTTCATGTA+TGG | + | chr8.1:19821109-19821128 | None:intergenic | 35.0% | |
| ACCAAACTAGCATCCTAAAA+TGG | + | chr8.1:19820480-19820499 | None:intergenic | 35.0% | |
| ACCTTAAAATAGTGAAGTCG+TGG | + | chr8.1:19820364-19820383 | None:intergenic | 35.0% | |
| ATGCAAATTCATAACAGTGC+TGG | - | chr8.1:19819562-19819581 | MS.gene059946:intron | 35.0% | |
| ATTCTTTAGCCTATGCTATG+AGG | - | chr8.1:19818260-19818279 | MS.gene059946:intron | 35.0% | |
| CAAATTCTTGCAAGGTGTAA+CGG | + | chr8.1:19818390-19818409 | None:intergenic | 35.0% | |
| CAATCTGTGCTACATTTATG+TGG | - | chr8.1:19820440-19820459 | MS.gene059946:intron | 35.0% | |
| CCAAAAAAGGGAAATAGTAG+TGG | - | chr8.1:19818355-19818374 | MS.gene059946:CDS | 35.0% | |
| CCATAATATGTATCCGACAT+CGG | - | chr8.1:19817759-19817778 | MS.gene059946:CDS | 35.0% | |
| CTACTAGTAATTCACTTGTG+AGG | - | chr8.1:19821202-19821221 | MS.gene059946:CDS | 35.0% | |
| CTTCAACTGAATTTAGACTC+GGG | + | chr8.1:19821006-19821025 | None:intergenic | 35.0% | |
| GAATAGAATGGTCTTCATGT+AGG | + | chr8.1:19820530-19820549 | None:intergenic | 35.0% | |
| GACCAAACTCAAACTTTCTA+AGG | - | chr8.1:19818748-19818767 | MS.gene059946:CDS | 35.0% | |
| GATGAAGTACAGGTTATTGT+TGG | + | chr8.1:19820022-19820041 | None:intergenic | 35.0% | |
| GTAACAATCAAAGACGGAAA+AGG | + | chr8.1:19817545-19817564 | None:intergenic | 35.0% | |
| TATACTTGGCACATTCCTAA+TGG | - | chr8.1:19818569-19818588 | MS.gene059946:intron | 35.0% | |
| TCAACAAAACTGCAAACTCT+AGG | - | chr8.1:19817946-19817965 | MS.gene059946:CDS | 35.0% | |
| TGCAAATTCATAACAGTGCT+GGG | - | chr8.1:19819563-19819582 | MS.gene059946:intron | 35.0% | |
| TGTTATCCAGACTATTCTAC+AGG | - | chr8.1:19820045-19820064 | MS.gene059946:intron | 35.0% | |
| TTCAACTGAATTTAGACTCG+GGG | + | chr8.1:19821005-19821024 | None:intergenic | 35.0% | |
| ! | ACCACGACTTCACTATTTTA+AGG | - | chr8.1:19820360-19820379 | MS.gene059946:intron | 35.0% |
| ! | ACTGATTTCATAAGCTATCC+AGG | + | chr8.1:19821288-19821307 | None:intergenic | 35.0% |
| ! | AGACAGCATATTTTCTTCGT+CGG | + | chr8.1:19821554-19821573 | None:intergenic | 35.0% |
| ! | AGAGATGTTTTCATTGGCAA+TGG | - | chr8.1:19820721-19820740 | MS.gene059946:intron | 35.0% |
| ! | ATCTAAAGCGAAGGCATATT+TGG | - | chr8.1:19818646-19818665 | MS.gene059946:intron | 35.0% |
| ! | CACCTTAGAAAGTTTGAGTT+TGG | + | chr8.1:19818753-19818772 | None:intergenic | 35.0% |
| ! | CTGATTTGAGCATATGGTAT+GGG | - | chr8.1:19820218-19820237 | MS.gene059946:intron | 35.0% |
| ! | CTTTTCTGTATTCCTCTTTG+TGG | - | chr8.1:19820083-19820102 | MS.gene059946:intron | 35.0% |
| ! | GATTTGGTAGGTCTTAATGT+TGG | - | chr8.1:19817407-19817426 | MS.gene059946:intron | 35.0% |
| ! | GGTTGAAGAATGAAACGTTT+TGG | + | chr8.1:19816996-19817015 | None:intergenic | 35.0% |
| ! | TTCCACTATATCTAAAGCGA+AGG | - | chr8.1:19818637-19818656 | MS.gene059946:intron | 35.0% |
| ! | TTTTGCCAATAGAGACTCTA+AGG | + | chr8.1:19817894-19817913 | None:intergenic | 35.0% |
| !! | AAACTGCAAACTCTAGGATT+CGG | - | chr8.1:19817952-19817971 | MS.gene059946:CDS | 35.0% |
| !! | GAACTTTCAGGTTACTTTCT+TGG | - | chr8.1:19821660-19821679 | MS.gene059946:CDS | 35.0% |
| !! | TCTTTTTGGCAATGAAGTTG+TGG | - | chr8.1:19820640-19820659 | MS.gene059946:intron | 35.0% |
| !! | TGAAGGTAGGTTTTGTCATT+CGG | - | chr8.1:19821113-19821132 | MS.gene059946:intron | 35.0% |
| !! | TTTTTGTGCGTGTTTGGTTT+GGG | - | chr8.1:19817337-19817356 | MS.gene059946:intron | 35.0% |
| !!! | ACCATTTTAGGATGCTAGTT+TGG | - | chr8.1:19820476-19820495 | MS.gene059946:intron | 35.0% |
| !!! | CCACTACTATTTCCCTTTTT+TGG | + | chr8.1:19818358-19818377 | None:intergenic | 35.0% |
| !!! | TCACCAACTTTTAGCTCATT+GGG | + | chr8.1:19819377-19819396 | None:intergenic | 35.0% |
| !!! | TTCACCAACTTTTAGCTCAT+TGG | + | chr8.1:19819378-19819397 | None:intergenic | 35.0% |
| AAAACCAGCTTGATCAAGGA+TGG | + | chr8.1:19819618-19819637 | None:intergenic | 40.0% | |
| AACACCCTATACAGGAATTG+AGG | - | chr8.1:19819097-19819116 | MS.gene059946:CDS | 40.0% | |
| AAGGATTCTCCTAGTCGATT+AGG | + | chr8.1:19817865-19817884 | None:intergenic | 40.0% | |
| AATTGGTTGCTGAGAGAGAA+GGG | - | chr8.1:19817504-19817523 | MS.gene059946:intron | 40.0% | |
| AGAATGTCGGATGAGCATAT+TGG | - | chr8.1:19819863-19819882 | MS.gene059946:intron | 40.0% | |
| AGACAGGGTTCAAGAATCTT+TGG | - | chr8.1:19820805-19820824 | MS.gene059946:intron | 40.0% | |
| ATCCAGACTATTCTACAGGT+CGG | - | chr8.1:19820049-19820068 | MS.gene059946:intron | 40.0% | |
| ATTAACGGCGGATAGTGATT+CGG | - | chr8.1:19817301-19817320 | MS.gene059946:intron | 40.0% | |
| CCATACCATATGCTCAAATC+AGG | + | chr8.1:19820220-19820239 | None:intergenic | 40.0% | |
| CCGATGTCGGATACATATTA+TGG | + | chr8.1:19817762-19817781 | None:intergenic | 40.0% | |
| CGTTAAAACCAGCTTGATCA+AGG | + | chr8.1:19819622-19819641 | None:intergenic | 40.0% | |
| GCAAGATCTTGATCTACTGT+TGG | - | chr8.1:19821447-19821466 | MS.gene059946:CDS | 40.0% | |
| GGTTGACGTGTATAGAATGT+CGG | - | chr8.1:19819850-19819869 | MS.gene059946:intron | 40.0% | |
| GTAACACTAACACCCTATAC+AGG | - | chr8.1:19819089-19819108 | MS.gene059946:CDS | 40.0% | |
| GTAGTCTTCAGTCTTCACAA+TGG | + | chr8.1:19818225-19818244 | None:intergenic | 40.0% | |
| GTCCAGATTCAACAAAACTG+AGG | + | chr8.1:19819296-19819315 | None:intergenic | 40.0% | |
| GTGCTGAAGGAGAAGAAAAT+TGG | - | chr8.1:19819407-19819426 | MS.gene059946:intron | 40.0% | |
| GTTAAAATGCCTTGGACTTC+AGG | + | chr8.1:19819458-19819477 | None:intergenic | 40.0% | |
| TAAAAAGCTTCCTGAGAAGC+TGG | - | chr8.1:19821756-19821775 | MS.gene059946:CDS | 40.0% | |
| TATGGGCCTGATTCTTACAT+GGG | - | chr8.1:19820235-19820254 | MS.gene059946:intron | 40.0% | |
| TCTATTGGGTCAACTGCTAT+CGG | - | chr8.1:19818786-19818805 | MS.gene059946:CDS | 40.0% | |
| TCTTGTCCATACATGAAGGT+AGG | - | chr8.1:19821100-19821119 | MS.gene059946:intron | 40.0% | |
| TGAACTAGTCAATGTGCTGA+AGG | - | chr8.1:19819394-19819413 | MS.gene059946:intron | 40.0% | |
| TGAAGGGAAGGTGAGATTAA+CGG | - | chr8.1:19817286-19817305 | MS.gene059946:intron | 40.0% | |
| TGAGAGATTTGAATAGAGGC+TGG | + | chr8.1:19817022-19817041 | None:intergenic | 40.0% | |
| TGAGCAAATGCCTGCATAAA+AGG | + | chr8.1:19820193-19820212 | None:intergenic | 40.0% | |
| TGAGCATATTGGATGTTCTC+TGG | - | chr8.1:19819874-19819893 | MS.gene059946:intron | 40.0% | |
| TGATCCATCCTGGCAAAAAA+AGG | + | chr8.1:19820606-19820625 | None:intergenic | 40.0% | |
| TGCAGCTACCTCTACTTATA+TGG | - | chr8.1:19819904-19819923 | MS.gene059946:intron | 40.0% | |
| TGCTTCTTGTCCATACATGA+AGG | - | chr8.1:19821096-19821115 | MS.gene059946:intron | 40.0% | |
| TGGTACCTTAGAGTCTCTAT+TGG | - | chr8.1:19817886-19817905 | MS.gene059946:CDS | 40.0% | |
| TGTGGATGCTTACTTTGTAG+AGG | - | chr8.1:19818544-19818563 | MS.gene059946:intron | 40.0% | |
| TGTTGTGTGTCGTGTTTCAT+AGG | + | chr8.1:19817666-19817685 | None:intergenic | 40.0% | |
| TTAATCTCACCTTCCCTTCA+CGG | + | chr8.1:19817286-19817305 | None:intergenic | 40.0% | |
| TTAGCATGTGTCTTCAAGAC+AGG | + | chr8.1:19819724-19819743 | None:intergenic | 40.0% | |
| TTCCCCAATGAGCTAAAAGT+TGG | - | chr8.1:19819371-19819390 | MS.gene059946:intron | 40.0% | |
| TTTGCACATGAGGAACTTTC+AGG | - | chr8.1:19821648-19821667 | MS.gene059946:CDS | 40.0% | |
| ! | AACTTTTGCTCCTTGAGAAG+AGG | + | chr8.1:19820933-19820952 | None:intergenic | 40.0% |
| ! | AAGTGCCTGATTTGAGCATA+TGG | - | chr8.1:19820212-19820231 | MS.gene059946:intron | 40.0% |
| ! | ACCTGGAGAGATGTTTTCAT+TGG | - | chr8.1:19820715-19820734 | MS.gene059946:intron | 40.0% |
| ! | ACTTTGTAGAGGCGTATACT+TGG | - | chr8.1:19818555-19818574 | MS.gene059946:intron | 40.0% |
| ! | AGTGATTCGGAGATAACGAA+AGG | - | chr8.1:19817314-19817333 | MS.gene059946:intron | 40.0% |
| ! | ATCGACTAGGAGAATCCTTT+TGG | - | chr8.1:19817866-19817885 | MS.gene059946:CDS | 40.0% |
| ! | CCTGATTTGAGCATATGGTA+TGG | - | chr8.1:19820217-19820236 | MS.gene059946:intron | 40.0% |
| ! | CGTTGTTGCACACTTTTACA+TGG | - | chr8.1:19819430-19819449 | MS.gene059946:intron | 40.0% |
| ! | GAAAGGTTTTTGTGCGTGTT+TGG | - | chr8.1:19817331-19817350 | MS.gene059946:intron | 40.0% |
| ! | GAAATTGACTCTGACGAAAC+TGG | + | chr8.1:19820974-19820993 | None:intergenic | 40.0% |
| ! | GACAGCATATTTTCTTCGTC+GGG | + | chr8.1:19821553-19821572 | None:intergenic | 40.0% |
| ! | GATTTGAATAGAGGCTGGTT+TGG | + | chr8.1:19817017-19817036 | None:intergenic | 40.0% |
| ! | GTGAACCAATTTTGCACATG+AGG | - | chr8.1:19821638-19821657 | MS.gene059946:CDS | 40.0% |
| ! | GTTTTTGTGCGTGTTTGGTT+TGG | - | chr8.1:19817336-19817355 | MS.gene059946:intron | 40.0% |
| ! | TAAAGCGAAGGCATATTTGG+CGG | - | chr8.1:19818649-19818668 | MS.gene059946:intron | 40.0% |
| ! | TAACCTTTTGGTACTTGCAC+AGG | - | chr8.1:19821729-19821748 | MS.gene059946:CDS | 40.0% |
| ! | TGCCTTCGCTTTAGATATAG+TGG | + | chr8.1:19818642-19818661 | None:intergenic | 40.0% |
| !! | AACTCTAGGATTCGGAAGTT+TGG | - | chr8.1:19817960-19817979 | MS.gene059946:CDS | 40.0% |
| !! | AATGTTGGTTTACCAGGAAC+TGG | - | chr8.1:19817422-19817441 | MS.gene059946:intron | 40.0% |
| !! | AGAGACTCTAAGGTACCAAA+AGG | + | chr8.1:19817884-19817903 | None:intergenic | 40.0% |
| !! | GAAAGTGAGTACTGAGGATT+TGG | - | chr8.1:19817391-19817410 | MS.gene059946:intron | 40.0% |
| !! | GATGATGGTGTTGTTCCTAA+GGG | - | chr8.1:19817566-19817585 | MS.gene059946:intron | 40.0% |
| !! | GGTCTTAATGTTGGTTTACC+AGG | - | chr8.1:19817416-19817435 | MS.gene059946:intron | 40.0% |
| !! | GGTGGTTTTTGGAAAAGCTA+CGG | + | chr8.1:19817072-19817091 | None:intergenic | 40.0% |
| !! | GTAGGTTTTGTCATTCGGTT+CGG | - | chr8.1:19821118-19821137 | MS.gene059946:intron | 40.0% |
| !! | TGATGATGGTGTTGTTCCTA+AGG | - | chr8.1:19817565-19817584 | MS.gene059946:intron | 40.0% |
| !! | TTCAAGTTGCAGACTCCAAA+TGG | - | chr8.1:19821592-19821611 | MS.gene059946:CDS | 40.0% |
| !!! | CACCAACTTTTAGCTCATTG+GGG | + | chr8.1:19819376-19819395 | None:intergenic | 40.0% |
| !!! | GGATATTAGTGGTGGGTTTT+TGG | - | chr8.1:19818298-19818317 | MS.gene059946:intron | 40.0% |
| !!! | TGATCAAGCTGGTTTTAACG+AGG | - | chr8.1:19819622-19819641 | MS.gene059946:intron | 40.0% |
| !!! | TGCCTCAGTTTTGTTGAATC+TGG | - | chr8.1:19819291-19819310 | MS.gene059946:CDS | 40.0% |
| AACCGACCTGTAGAATAGTC+TGG | + | chr8.1:19820054-19820073 | None:intergenic | 45.0% | |
| ATCATGCTTCCTGTTGTACC+AGG | - | chr8.1:19821034-19821053 | MS.gene059946:intron | 45.0% | |
| ATCTGATCAACCAGCTTCTC+AGG | + | chr8.1:19821769-19821788 | None:intergenic | 45.0% | |
| ATGGGCCTGATTCTTACATG+GGG | - | chr8.1:19820236-19820255 | MS.gene059946:intron | 45.0% | |
| ATTCCTTACTGCCCATCTTG+AGG | - | chr8.1:19820691-19820710 | MS.gene059946:intron | 45.0% | |
| CAACGAACACAACCACAAAG+AGG | + | chr8.1:19820098-19820117 | None:intergenic | 45.0% | |
| CAATGGAAGCAAAGAGAAGG+GGG | - | chr8.1:19820738-19820757 | MS.gene059946:intron | 45.0% | |
| CAATTGGTTGCTGAGAGAGA+AGG | - | chr8.1:19817503-19817522 | MS.gene059946:intron | 45.0% | |
| CATATTTCCACAAGCTCTCC+TGG | - | chr8.1:19821267-19821286 | MS.gene059946:CDS | 45.0% | |
| CGGTCATTACTGTCATCTGT+TGG | + | chr8.1:19820282-19820301 | None:intergenic | 45.0% | |
| CTCACTTTCACAACCTCTTC+CGG | + | chr8.1:19817380-19817399 | None:intergenic | 45.0% | |
| GAACAATGCATGATCCATCC+TGG | + | chr8.1:19820616-19820635 | None:intergenic | 45.0% | |
| GAAGTCGCATATTGCATGAG+TGG | - | chr8.1:19818688-19818707 | MS.gene059946:CDS | 45.0% | |
| GACAGTAATGACCGATGAAG+AGG | - | chr8.1:19820288-19820307 | MS.gene059946:intron | 45.0% | |
| GAGCAAATTAAGGCCCTGTT+TGG | + | chr8.1:19821415-19821434 | None:intergenic | 45.0% | |
| GAGCAGCTGTTAAAATGCCT+TGG | + | chr8.1:19819466-19819485 | None:intergenic | 45.0% | |
| GATAGAGAGTGGAAACAGAG+AGG | + | chr8.1:19816952-19816971 | None:intergenic | 45.0% | |
| GATTACTGCAATTGTCGCAG+CGG | - | chr8.1:19820880-19820899 | MS.gene059946:intron | 45.0% | |
| GATTAGGCATGTTCCGATGT+CGG | + | chr8.1:19817775-19817794 | None:intergenic | 45.0% | |
| GCAATGGAAGCAAAGAGAAG+GGG | - | chr8.1:19820737-19820756 | MS.gene059946:intron | 45.0% | |
| GCAGTCAAAATGGCAAAAGC+TGG | - | chr8.1:19819539-19819558 | MS.gene059946:intron | 45.0% | |
| GCCAATGAAAACATCTCTCC+AGG | + | chr8.1:19820719-19820738 | None:intergenic | 45.0% | |
| GCTTCAGCATAACTACCCTT+AGG | + | chr8.1:19817584-19817603 | None:intergenic | 45.0% | |
| GGCAATGGAAGCAAAGAGAA+GGG | - | chr8.1:19820736-19820755 | MS.gene059946:intron | 45.0% | |
| GGCAGATTCAGCAGTCAAAA+TGG | - | chr8.1:19819529-19819548 | MS.gene059946:intron | 45.0% | |
| GTATGGGCCTGATTCTTACA+TGG | - | chr8.1:19820234-19820253 | MS.gene059946:intron | 45.0% | |
| TAAACCGGACCTAATCGACT+AGG | - | chr8.1:19817853-19817872 | MS.gene059946:CDS | 45.0% | |
| TACATGGATCCTGAAGTCCA+AGG | - | chr8.1:19819446-19819465 | MS.gene059946:intron | 45.0% | |
| TAGCCTGTGCAAGTACCAAA+AGG | + | chr8.1:19821735-19821754 | None:intergenic | 45.0% | |
| TATCGCAGCAACCTCTTCAT+CGG | + | chr8.1:19820302-19820321 | None:intergenic | 45.0% | |
| TGCACTCAAGGGACAAATAC+AGG | - | chr8.1:19818151-19818170 | MS.gene059946:intron | 45.0% | |
| TGGCAATGGAAGCAAAGAGA+AGG | - | chr8.1:19820735-19820754 | MS.gene059946:intron | 45.0% | |
| TTCTCCTAGTCGATTAGGTC+CGG | + | chr8.1:19817860-19817879 | None:intergenic | 45.0% | |
| TTTGCCCCCATGTAAGAATC+AGG | + | chr8.1:19820244-19820263 | None:intergenic | 45.0% | |
| ! | AAAGCGAAGGCATATTTGGC+GGG | - | chr8.1:19818650-19818669 | MS.gene059946:intron | 45.0% |
| ! | AGGCTCCACCTCGAATATTT+TGG | - | chr8.1:19820772-19820791 | MS.gene059946:intron | 45.0% |
| ! | ATTCATAACAGTGCTGGGTG+TGG | - | chr8.1:19819568-19819587 | MS.gene059946:intron | 45.0% |
| ! | CTTGCAAGGTGTAACGGAAA+GGG | + | chr8.1:19818384-19818403 | None:intergenic | 45.0% |
| ! | GCATATTTTCTTCGTCGGGT+AGG | + | chr8.1:19821549-19821568 | None:intergenic | 45.0% |
| ! | GGAGCAGGAAATGAAGGTTT+TGG | + | chr8.1:19817048-19817067 | None:intergenic | 45.0% |
| ! | GGTTGTGAAAGTGAGTACTG+AGG | - | chr8.1:19817385-19817404 | MS.gene059946:intron | 45.0% |
| ! | TCTTGCAAGGTGTAACGGAA+AGG | + | chr8.1:19818385-19818404 | None:intergenic | 45.0% |
| !! | GGTTTTTGGAAAAGCTACGG+TGG | + | chr8.1:19817069-19817088 | None:intergenic | 45.0% |
| !! | GTGAGTACTGAGGATTTGGT+AGG | - | chr8.1:19817395-19817414 | MS.gene059946:intron | 45.0% |
| !! | GTTTGGTTTGGGTGCTTGAT+GGG | - | chr8.1:19817348-19817367 | MS.gene059946:intron | 45.0% |
| !! | TGGTTTGGGTTGATAGAGAG+TGG | + | chr8.1:19816963-19816982 | None:intergenic | 45.0% |
| !! | TGTTTGGTTTGGGTGCTTGA+TGG | - | chr8.1:19817347-19817366 | MS.gene059946:intron | 45.0% |
| !!! | CTTGCCTTTTTTTGCCAGGA+TGG | - | chr8.1:19820599-19820618 | MS.gene059946:intron | 45.0% |
| !!! | TGCTCTTGCCTTTTTTTGCC+AGG | - | chr8.1:19820595-19820614 | MS.gene059946:intron | 45.0% |
| !! | TAAACATAATATTAAATAAT+TGG | - | chr8.1:19817915-19817934 | MS.gene059946:CDS | 5.0% |
| AAGCTATCCAGGAGAGCTTG+TGG | + | chr8.1:19821277-19821296 | None:intergenic | 50.0% | |
| ACAGAGTCTACATTGTGCGC+AGG | + | chr8.1:19820328-19820347 | None:intergenic | 50.0% | |
| ACCAGGAACTGGTCGTTCTA+GGG | - | chr8.1:19817433-19817452 | MS.gene059946:intron | 50.0% | |
| AGACGACGGAGGAGTTTCAA+AGG | + | chr8.1:19817107-19817126 | None:intergenic | 50.0% | |
| AGGAGTTTCAAAGGAGCGAC+AGG | + | chr8.1:19817098-19817117 | None:intergenic | 50.0% | |
| AGGGAAGGTGAGATTAACGG+CGG | - | chr8.1:19817289-19817308 | MS.gene059946:intron | 50.0% | |
| AGGTGAAGATCGACCGTGAA+GGG | - | chr8.1:19817270-19817289 | MS.gene059946:intron | 50.0% | |
| AGTGTAGCAGCCGCTTCATT+CGG | + | chr8.1:19817166-19817185 | None:intergenic | 50.0% | |
| ATGAATGGAACAACCCTCCC+CGG | + | chr8.1:19821068-19821087 | None:intergenic | 50.0% | |
| CACACTCCTCACAAATTGCG+CGG | + | chr8.1:19818827-19818846 | None:intergenic | 50.0% | |
| CACATACATCAGGGAGAGTG+TGG | - | chr8.1:19818094-19818113 | MS.gene059946:CDS | 50.0% | |
| CTCTCCAGGTACCTCAAGAT+GGG | + | chr8.1:19820705-19820724 | None:intergenic | 50.0% | |
| GAAGCAAAGAGAAGGGGGAT+GGG | - | chr8.1:19820743-19820762 | MS.gene059946:intron | 50.0% | |
| GACTCCAAATGGTCAATCCG+TGG | - | chr8.1:19821603-19821622 | MS.gene059946:CDS | 50.0% | |
| GAGGGTTGTTCCATTCATGG+TGG | - | chr8.1:19821070-19821089 | MS.gene059946:intron | 50.0% | |
| GCTGGGTGTGGATTTCATGT+CGG | - | chr8.1:19819580-19819599 | MS.gene059946:intron | 50.0% | |
| GGAGTTTCAAAGGAGCGACA+GGG | + | chr8.1:19817097-19817116 | None:intergenic | 50.0% | |
| GGCTCTGCTTGGAAACTGAA+AGG | + | chr8.1:19819668-19819687 | None:intergenic | 50.0% | |
| GTACCTCAAGATGGGCAGTA+AGG | + | chr8.1:19820697-19820716 | None:intergenic | 50.0% | |
| GTAGCTACTCCTGGTACAAC+AGG | + | chr8.1:19821046-19821065 | None:intergenic | 50.0% | |
| GTTGACACGAACCGAGTCAT+GGG | - | chr8.1:19817224-19817243 | MS.gene059946:intron | 50.0% | |
| GTTGTACCAGGAGTAGCTAC+CGG | - | chr8.1:19821046-19821065 | MS.gene059946:intron | 50.0% | |
| TAACAGCTGCTCAGAAGCAG+TGG | - | chr8.1:19819474-19819493 | MS.gene059946:intron | 50.0% | |
| TACCAGGAACTGGTCGTTCT+AGG | - | chr8.1:19817432-19817451 | MS.gene059946:intron | 50.0% | |
| TACGGTGGAGCAGGAAATGA+AGG | + | chr8.1:19817054-19817073 | None:intergenic | 50.0% | |
| TCCAAATGGTCAATCCGTGG+CGG | - | chr8.1:19821606-19821625 | MS.gene059946:CDS | 50.0% | |
| TCTCTCCAGGTACCTCAAGA+TGG | + | chr8.1:19820706-19820725 | None:intergenic | 50.0% | |
| TGGGCCTGATTCTTACATGG+GGG | - | chr8.1:19820237-19820256 | MS.gene059946:intron | 50.0% | |
| TGTTGACACGAACCGAGTCA+TGG | - | chr8.1:19817223-19817242 | MS.gene059946:intron | 50.0% | |
| TTGTACCAGGAGTAGCTACC+GGG | - | chr8.1:19821047-19821066 | MS.gene059946:intron | 50.0% | |
| TTTCAAAGGAGCGACAGGGT+TGG | + | chr8.1:19817093-19817112 | None:intergenic | 50.0% | |
| TTTCTTCGTCGGGTAGGTGA+CGG | + | chr8.1:19821543-19821562 | None:intergenic | 50.0% | |
| ! | ACTGCTATCGGTTACGCTCA+AGG | - | chr8.1:19818798-19818817 | MS.gene059946:CDS | 50.0% |
| ! | AGAAGCACAGCCACCATGAA+TGG | + | chr8.1:19821083-19821102 | None:intergenic | 50.0% |
| ! | ATACATCAGGGAGAGTGTGG+AGG | - | chr8.1:19818097-19818116 | MS.gene059946:intron | 50.0% |
| ! | GTAGGTGACGGCAAACTGTT+AGG | + | chr8.1:19821531-19821550 | None:intergenic | 50.0% |
| !! | GTCGTTCTAGGGTGAATACG+TGG | - | chr8.1:19817444-19817463 | MS.gene059946:intron | 50.0% |
| !!! | AGTGGTGGGTTTTTGGTCAG+TGG | - | chr8.1:19818305-19818324 | MS.gene059946:intron | 50.0% |
| ACACGCGATGTCTCCTCCAT+AGG | + | chr8.1:19817206-19817225 | None:intergenic | 55.0% | |
| ACCCTAGAACGACCAGTTCC+TGG | + | chr8.1:19817437-19817456 | None:intergenic | 55.0% | |
| AGAAGGGGGATGGGAGTAGT+AGG | - | chr8.1:19820752-19820771 | MS.gene059946:intron | 55.0% | |
| AGCCAGCAGACCGAATGAAG+CGG | - | chr8.1:19817153-19817172 | MS.gene059946:CDS | 55.0% | |
| AGGGCTAACACCACCTATGG+AGG | - | chr8.1:19817190-19817209 | MS.gene059946:CDS | 55.0% | |
| AGGTGTCCGCGCAATTTGTG+AGG | - | chr8.1:19818818-19818837 | MS.gene059946:CDS | 55.0% | |
| GAAGATCGACCGTGAAGGGA+AGG | - | chr8.1:19817274-19817293 | MS.gene059946:intron | 55.0% | |
| GAGGTGAAGATCGACCGTGA+AGG | - | chr8.1:19817269-19817288 | MS.gene059946:intron | 55.0% | |
| GGAAGCAAAGAGAAGGGGGA+TGG | - | chr8.1:19820742-19820761 | MS.gene059946:intron | 55.0% | |
| GGGGAGGGTTGTTCCATTCA+TGG | - | chr8.1:19821067-19821086 | MS.gene059946:intron | 55.0% | |
| GGGTAGTTATGCTGAAGCCC+AGG | - | chr8.1:19817586-19817605 | MS.gene059946:intron | 55.0% | |
| GGTTGCTGAGAGAGAAGGGA+AGG | - | chr8.1:19817508-19817527 | MS.gene059946:intron | 55.0% | |
| TCGCTGTACAGCCCATGACT+CGG | + | chr8.1:19817238-19817257 | None:intergenic | 55.0% | |
| TGGAAAAGCTACGGTGGAGC+AGG | + | chr8.1:19817063-19817082 | None:intergenic | 55.0% | |
| TGGGCTGTACAGCGAGAGTA+TGG | - | chr8.1:19817243-19817262 | MS.gene059946:intron | 55.0% | |
| TGTACCAGGAGTAGCTACCG+GGG | - | chr8.1:19821048-19821067 | MS.gene059946:intron | 55.0% | |
| TTCACATCCTACGTCCGCCA+CGG | + | chr8.1:19821623-19821642 | None:intergenic | 55.0% | |
| ! | ACTGCCCATCTTGAGGTACC+TGG | - | chr8.1:19820698-19820717 | MS.gene059946:intron | 55.0% |
| ! | CTGTACAGCGAGAGTATGGG+TGG | - | chr8.1:19817247-19817266 | MS.gene059946:intron | 55.0% |
| ! | GGGCTGTACAGCGAGAGTAT+GGG | - | chr8.1:19817244-19817263 | MS.gene059946:intron | 55.0% |
| ! | GGTTTGGGTGCTTGATGGGT+TGG | - | chr8.1:19817352-19817371 | MS.gene059946:intron | 55.0% |
| ! | TACAGCGAGAGTATGGGTGG+AGG | - | chr8.1:19817250-19817269 | MS.gene059946:intron | 55.0% |
| ! | TCCGCCACGGATTGACCATT+TGG | + | chr8.1:19821610-19821629 | None:intergenic | 55.0% |
| ! | TGCATAGCGATGGCTCTGCT+TGG | + | chr8.1:19819679-19819698 | None:intergenic | 55.0% |
| !! | GGTGCTTGATGGGTTGGAAC+CGG | - | chr8.1:19817358-19817377 | MS.gene059946:intron | 55.0% |
| !! | TGATGGGTTGGAACCGGAAG+AGG | - | chr8.1:19817364-19817383 | MS.gene059946:intron | 55.0% |
| !!! | GCGACAGGGTTGGTGGTTTT+TGG | + | chr8.1:19817083-19817102 | None:intergenic | 55.0% |
| AAGCGGCTGCTACACTACGC+AGG | - | chr8.1:19817170-19817189 | MS.gene059946:CDS | 60.0% | |
| AGCCGCTTCATTCGGTCTGC+TGG | + | chr8.1:19817158-19817177 | None:intergenic | 60.0% | |
| AGCGGCTGCTACACTACGCA+GGG | - | chr8.1:19817171-19817190 | MS.gene059946:CDS | 60.0% | |
| CAAAGGAGCGACAGGGTTGG+TGG | + | chr8.1:19817090-19817109 | None:intergenic | 60.0% | |
| CGCAGGGCTAACACCACCTA+TGG | - | chr8.1:19817187-19817206 | MS.gene059946:CDS | 60.0% | |
| CGCGATGTCTCCTCCATAGG+TGG | + | chr8.1:19817203-19817222 | None:intergenic | 60.0% | |
| CGCGCCATCCTTGATCAAGC+TGG | - | chr8.1:19819611-19819630 | MS.gene059946:intron | 60.0% | |
| GAAACTCCTCCGCGAGACGA+CGG | + | chr8.1:19817121-19817140 | None:intergenic | 60.0% | |
| GAAACTCCTCCGTCGTCTCG+CGG | - | chr8.1:19817109-19817128 | MS.gene059946:CDS | 60.0% | |
| ACCAGGAGTAGCTACCGGGG+AGG | - | chr8.1:19821051-19821070 | MS.gene059946:intron | 65.0% | |
| CCAGGAGTAGCTACCGGGGA+GGG | - | chr8.1:19821052-19821071 | MS.gene059946:intron | 65.0% | |
| !! | GGTCAATCCGTGGCGGACGT+AGG | - | chr8.1:19821613-19821632 | MS.gene059946:CDS | 65.0% |
| ACTCCTCCGCGAGACGACGG+AGG | + | chr8.1:19817118-19817137 | None:intergenic | 70.0% | |
| ACTCCTCCGTCGTCTCGCGG+AGG | - | chr8.1:19817112-19817131 | MS.gene059946:CDS | 70.0% | |
| CCCTCCCCGGTAGCTACTCC+TGG | + | chr8.1:19821055-19821074 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 19816930 | 19821801 | 19816930 | ID=MS.gene059946 |
| chr8.1 | mRNA | 19816930 | 19821801 | 19816930 | ID=MS.gene059946.t1;Parent=MS.gene059946 |
| chr8.1 | exon | 19821124 | 19821801 | 19821124 | ID=MS.gene059946.t1.exon1;Parent=MS.gene059946.t1 |
| chr8.1 | CDS | 19821124 | 19821801 | 19821124 | ID=cds.MS.gene059946.t1;Parent=MS.gene059946.t1 |
| chr8.1 | exon | 19819088 | 19819372 | 19819088 | ID=MS.gene059946.t1.exon2;Parent=MS.gene059946.t1 |
| chr8.1 | CDS | 19819088 | 19819372 | 19819088 | ID=cds.MS.gene059946.t1;Parent=MS.gene059946.t1 |
| chr8.1 | exon | 19818665 | 19818880 | 19818665 | ID=MS.gene059946.t1.exon3;Parent=MS.gene059946.t1 |
| chr8.1 | CDS | 19818665 | 19818880 | 19818665 | ID=cds.MS.gene059946.t1;Parent=MS.gene059946.t1 |
| chr8.1 | exon | 19818350 | 19818529 | 19818350 | ID=MS.gene059946.t1.exon4;Parent=MS.gene059946.t1 |
| chr8.1 | CDS | 19818350 | 19818529 | 19818350 | ID=cds.MS.gene059946.t1;Parent=MS.gene059946.t1 |
| chr8.1 | exon | 19817614 | 19818114 | 19817614 | ID=MS.gene059946.t1.exon5;Parent=MS.gene059946.t1 |
| chr8.1 | CDS | 19817614 | 19818114 | 19817614 | ID=cds.MS.gene059946.t1;Parent=MS.gene059946.t1 |
| chr8.1 | exon | 19817062 | 19817223 | 19817062 | ID=MS.gene059946.t1.exon6;Parent=MS.gene059946.t1 |
| chr8.1 | CDS | 19817062 | 19817223 | 19817062 | ID=cds.MS.gene059946.t1;Parent=MS.gene059946.t1 |
| chr8.1 | exon | 19816930 | 19816980 | 19816930 | ID=MS.gene059946.t1.exon7;Parent=MS.gene059946.t1 |
| chr8.1 | CDS | 19816930 | 19816980 | 19816930 | ID=cds.MS.gene059946.t1;Parent=MS.gene059946.t1 |
| Gene Sequence |
| Protein sequence |
