Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53103.t1 | XP_003613938.2 | 98.9 | 617 | 7 | 0 | 1 | 617 | 1 | 617 | 0.00E+00 | 1124.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53103.t1 | Q9C533 | 64.0 | 616 | 170 | 13 | 1 | 585 | 1 | 595 | 1.6e-173 | 610.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53103.t1 | G7JWM4 | 98.9 | 617 | 7 | 0 | 1 | 617 | 1 | 617 | 0.0e+00 | 1124.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene88489 | MS.gene53103 | PPI |
| MS.gene53103 | MS.gene056242 | PPI |
| MS.gene016597 | MS.gene53103 | PPI |
| MS.gene53103 | MS.gene60129 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53103.t1 | MTR_5g042870 | 98.865 | 617 | 7 | 0 | 1 | 617 | 1 | 617 | 0.0 | 1261 |
| MS.gene53103.t1 | MTR_4g082560 | 68.790 | 628 | 177 | 6 | 1 | 616 | 1 | 621 | 0.0 | 867 |
| MS.gene53103.t1 | MTR_5g042870 | 98.182 | 385 | 7 | 0 | 233 | 617 | 82 | 466 | 0.0 | 770 |
| MS.gene53103.t1 | MTR_3g115950 | 39.367 | 442 | 219 | 9 | 2 | 429 | 3 | 409 | 1.55e-96 | 309 |
| MS.gene53103.t1 | MTR_4g076120 | 37.856 | 457 | 241 | 8 | 1 | 432 | 2 | 440 | 3.99e-91 | 297 |
| MS.gene53103.t1 | MTR_3g115950 | 39.941 | 338 | 184 | 8 | 106 | 429 | 3 | 335 | 2.44e-70 | 238 |
| MS.gene53103.t1 | MTR_4g076120 | 41.696 | 283 | 141 | 4 | 165 | 432 | 93 | 366 | 1.63e-62 | 219 |
| MS.gene53103.t1 | MTR_1g085980 | 30.603 | 464 | 264 | 11 | 1 | 449 | 1 | 421 | 1.75e-61 | 213 |
| MS.gene53103.t1 | MTR_7g114080 | 30.178 | 169 | 106 | 5 | 181 | 342 | 162 | 325 | 1.76e-14 | 75.9 |
| MS.gene53103.t1 | MTR_6g033315 | 31.298 | 131 | 80 | 2 | 180 | 310 | 151 | 271 | 1.94e-14 | 76.3 |
| MS.gene53103.t1 | MTR_7g088350 | 31.298 | 131 | 74 | 2 | 180 | 310 | 164 | 278 | 8.13e-14 | 74.3 |
| MS.gene53103.t1 | MTR_7g114080 | 51.852 | 54 | 26 | 0 | 181 | 234 | 162 | 215 | 2.53e-13 | 72.0 |
| MS.gene53103.t1 | MTR_7g114080 | 51.852 | 54 | 26 | 0 | 181 | 234 | 162 | 215 | 2.70e-13 | 72.4 |
| MS.gene53103.t1 | MTR_3g098840 | 31.298 | 131 | 80 | 3 | 180 | 310 | 152 | 272 | 4.95e-13 | 72.0 |
| MS.gene53103.t1 | MTR_7g114080 | 51.852 | 54 | 26 | 0 | 181 | 234 | 162 | 215 | 7.71e-13 | 70.5 |
| MS.gene53103.t1 | MTR_6g038020 | 32.824 | 131 | 78 | 3 | 180 | 310 | 138 | 258 | 2.80e-12 | 69.3 |
| MS.gene53103.t1 | MTR_4g021795 | 29.268 | 164 | 101 | 3 | 180 | 340 | 107 | 258 | 3.36e-12 | 68.2 |
| MS.gene53103.t1 | MTR_4g116160 | 27.815 | 151 | 92 | 3 | 181 | 326 | 205 | 343 | 3.41e-12 | 69.3 |
| MS.gene53103.t1 | MTR_6g038020 | 32.824 | 131 | 78 | 3 | 180 | 310 | 141 | 261 | 3.42e-12 | 69.3 |
| MS.gene53103.t1 | MTR_7g083480 | 29.771 | 131 | 82 | 2 | 180 | 310 | 151 | 271 | 3.54e-12 | 69.3 |
| MS.gene53103.t1 | MTR_4g116160 | 27.815 | 151 | 92 | 3 | 181 | 326 | 378 | 516 | 3.58e-12 | 69.7 |
| MS.gene53103.t1 | MTR_4g116160 | 48.980 | 49 | 25 | 0 | 181 | 229 | 378 | 426 | 7.69e-12 | 68.6 |
| MS.gene53103.t1 | MTR_1g112830 | 50.000 | 58 | 26 | 1 | 181 | 235 | 463 | 520 | 9.62e-12 | 68.6 |
| MS.gene53103.t1 | MTR_1g098390 | 45.614 | 57 | 31 | 0 | 180 | 236 | 137 | 193 | 1.29e-11 | 67.4 |
| MS.gene53103.t1 | MTR_5g023230 | 43.750 | 64 | 36 | 0 | 173 | 236 | 162 | 225 | 3.85e-11 | 64.3 |
| MS.gene53103.t1 | MTR_5g023230 | 32.407 | 108 | 63 | 3 | 173 | 280 | 142 | 239 | 5.61e-11 | 64.7 |
| MS.gene53103.t1 | MTR_5g023230 | 32.407 | 108 | 63 | 3 | 173 | 280 | 162 | 259 | 6.05e-11 | 64.7 |
| MS.gene53103.t1 | MTR_1g094610 | 29.630 | 135 | 81 | 2 | 192 | 326 | 108 | 228 | 7.13e-11 | 63.9 |
| MS.gene53103.t1 | MTR_4g092760 | 47.917 | 48 | 25 | 0 | 181 | 228 | 365 | 412 | 9.35e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53103.t1 | AT1G69420 | 64.019 | 617 | 168 | 14 | 1 | 585 | 1 | 595 | 0.0 | 717 |
| MS.gene53103.t1 | AT1G69420 | 64.019 | 617 | 168 | 14 | 1 | 585 | 1 | 595 | 0.0 | 717 |
| MS.gene53103.t1 | AT4G15080 | 39.831 | 472 | 236 | 9 | 1 | 449 | 2 | 448 | 2.10e-105 | 334 |
| MS.gene53103.t1 | AT4G15080 | 39.831 | 472 | 236 | 9 | 1 | 449 | 2 | 448 | 2.10e-105 | 334 |
| MS.gene53103.t1 | AT3G22180 | 39.374 | 447 | 234 | 10 | 1 | 429 | 2 | 429 | 1.62e-94 | 305 |
| MS.gene53103.t1 | AT2G33640 | 38.679 | 424 | 199 | 10 | 2 | 408 | 3 | 382 | 5.55e-85 | 276 |
| MS.gene53103.t1 | AT4G01730 | 34.221 | 263 | 152 | 4 | 174 | 429 | 153 | 401 | 4.47e-38 | 148 |
| MS.gene53103.t1 | AT5G41060 | 31.298 | 131 | 80 | 3 | 180 | 310 | 81 | 201 | 1.01e-14 | 76.3 |
| MS.gene53103.t1 | AT5G41060 | 31.298 | 131 | 80 | 3 | 180 | 310 | 81 | 201 | 1.01e-14 | 76.3 |
| MS.gene53103.t1 | AT5G04270 | 30.263 | 152 | 92 | 3 | 192 | 343 | 105 | 242 | 1.33e-14 | 75.1 |
| MS.gene53103.t1 | AT3G26935 | 30.534 | 131 | 81 | 2 | 180 | 310 | 150 | 270 | 2.57e-14 | 75.9 |
| MS.gene53103.t1 | AT5G41060 | 31.298 | 131 | 80 | 3 | 180 | 310 | 148 | 268 | 2.71e-14 | 75.9 |
| MS.gene53103.t1 | AT5G41060 | 31.298 | 131 | 80 | 3 | 180 | 310 | 133 | 253 | 4.45e-14 | 75.1 |
| MS.gene53103.t1 | AT3G48760 | 31.298 | 131 | 80 | 2 | 180 | 310 | 159 | 279 | 4.75e-14 | 75.5 |
| MS.gene53103.t1 | AT4G24630 | 32.824 | 131 | 78 | 3 | 180 | 310 | 137 | 257 | 2.40e-13 | 72.8 |
| MS.gene53103.t1 | AT3G04970 | 46.429 | 56 | 30 | 0 | 181 | 236 | 75 | 130 | 2.48e-12 | 68.6 |
| MS.gene53103.t1 | AT3G04970 | 48.148 | 54 | 28 | 0 | 181 | 234 | 162 | 215 | 3.26e-12 | 68.6 |
| MS.gene53103.t1 | AT3G04970 | 46.429 | 56 | 30 | 0 | 181 | 236 | 162 | 217 | 5.41e-12 | 68.6 |
| MS.gene53103.t1 | AT5G50020 | 45.614 | 57 | 31 | 0 | 180 | 236 | 137 | 193 | 1.46e-11 | 67.4 |
| MS.gene53103.t1 | AT5G50020 | 45.614 | 57 | 31 | 0 | 180 | 236 | 167 | 223 | 1.73e-11 | 67.0 |
Find 134 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATATTCTTCTCATTAAAA+AGG | 0.200874 | 5.4:-31858878 | MS.gene53103:intron |
| TTCCAGATTACTTGTGTCTT+TGG | 0.226797 | 5.4:-31860954 | MS.gene53103:intron |
| GAACTTACAGACGCTGTTTC+TGG | 0.235998 | 5.4:+31857909 | None:intergenic |
| ACAGGCAGTATGCACGATTT+TGG | 0.237509 | 5.4:-31858941 | MS.gene53103:intron |
| GCAAGGCTAGATGATGATTT+TGG | 0.249277 | 5.4:+31857207 | None:intergenic |
| ATTTATCAGTATATTGTTAC+TGG | 0.274197 | 5.4:-31862665 | MS.gene53103:CDS |
| GGCGAATCTAAACTGCTTTC+CGG | 0.283211 | 5.4:+31857480 | None:intergenic |
| GCTGCAGGTCTTTCTGTTGC+TGG | 0.285427 | 5.4:-31857402 | MS.gene53103:CDS |
| GAAGCCTTTGTCGATATTTC+CGG | 0.288831 | 5.4:+31857590 | None:intergenic |
| GATGGAAATGCTTCAACTAT+TGG | 0.294410 | 5.4:-31860789 | MS.gene53103:CDS |
| CTACTTTCCGTCGCGGTCAA+TGG | 0.301321 | 5.4:-31858211 | MS.gene53103:CDS |
| TTCATAGATCAACAACAAAT+TGG | 0.315417 | 5.4:-31857275 | MS.gene53103:CDS |
| AACTATTGGACCGAAATCTA+TGG | 0.325522 | 5.4:-31860775 | MS.gene53103:CDS |
| TTGAGCTAACAGGCGACATT+TGG | 0.326711 | 5.4:+31858264 | None:intergenic |
| CAGTGGCTTAATAACTGTAT+TGG | 0.328982 | 5.4:-31860219 | MS.gene53103:CDS |
| ACACAAAAGGGGTGGATATC+AGG | 0.340246 | 5.4:+31857459 | None:intergenic |
| TCGCCTGTTAGCTCAATTAC+TGG | 0.344410 | 5.4:-31858257 | MS.gene53103:CDS |
| GCTTCCTTATCCATAGATTT+CGG | 0.345404 | 5.4:+31860765 | None:intergenic |
| TATGGTTGCTGCTCTTCTCT+TGG | 0.365443 | 5.4:-31860166 | MS.gene53103:intron |
| GTTACCTTATCACCCTCTTC+AGG | 0.381077 | 5.4:-31862851 | MS.gene53103:intron |
| GCAGCTGATCCTGCAGATCC+AGG | 0.388352 | 5.4:-31860912 | MS.gene53103:CDS |
| GTCTTAACAAACTATTCTTC+CGG | 0.390193 | 5.4:-31857609 | MS.gene53103:CDS |
| TGAGCTAACAGGCGACATTT+GGG | 0.394251 | 5.4:+31858265 | None:intergenic |
| TACTGGACTCTACACACCTT+TGG | 0.399213 | 5.4:-31862648 | MS.gene53103:intron |
| CTTATTCTTCAATGGTTGAC+TGG | 0.399821 | 5.4:-31859203 | MS.gene53103:CDS |
| GTTGGGCAGCAGTTTCTCTC+TGG | 0.401350 | 5.4:-31859117 | MS.gene53103:CDS |
| GACACAACAACGAGCCATTC+AGG | 0.403847 | 5.4:-31857728 | MS.gene53103:CDS |
| ATCCGTTTACCTGGCCTCCT+AGG | 0.410572 | 5.4:+31857660 | None:intergenic |
| TCCGTTTACCTGGCCTCCTA+GGG | 0.414350 | 5.4:+31857661 | None:intergenic |
| GTGTCTTTGGACTGTACATA+TGG | 0.420645 | 5.4:-31860941 | MS.gene53103:CDS |
| AGAGAAAAGCCATAGAAAAC+AGG | 0.428024 | 5.4:+31860668 | None:intergenic |
| GATTGCAGCTTATTCTTCAA+TGG | 0.428379 | 5.4:-31859211 | MS.gene53103:intron |
| CCCCTAGGAGGCCAGGTAAA+CGG | 0.428786 | 5.4:-31857662 | MS.gene53103:CDS |
| AGAGAAGAGCAGCAACCATA+AGG | 0.430926 | 5.4:+31860169 | None:intergenic |
| ACGCATGTTCGTGGATGATC+AGG | 0.439717 | 5.4:-31858177 | MS.gene53103:intron |
| TTCCGCCGGAGGCACACAAA+AGG | 0.446215 | 5.4:+31857446 | None:intergenic |
| AGAGAAACTGCTGCCCAACT+TGG | 0.452108 | 5.4:+31859121 | None:intergenic |
| TCCGCCGGAGGCACACAAAA+GGG | 0.452283 | 5.4:+31857447 | None:intergenic |
| CGGCATTGTTGCATCTTCTC+CGG | 0.459484 | 5.4:-31857499 | MS.gene53103:CDS |
| GACTTGTCCTTGCTTCAAGC+TGG | 0.460104 | 5.4:+31857541 | None:intergenic |
| AGTCCAGTAATTGAGCTAAC+AGG | 0.464280 | 5.4:+31858254 | None:intergenic |
| TAAATCTTCTTCCCAACAAA+AGG | 0.466512 | 5.4:+31862683 | None:intergenic |
| CTGTAGTTTGTGTGAAGTTG+AGG | 0.468132 | 5.4:-31860565 | MS.gene53103:intron |
| TTCTGAAAGATGAGGAAGAA+TGG | 0.469297 | 5.4:-31862880 | None:intergenic |
| CATCATAGCTTTGAGGGAGC+AGG | 0.470569 | 5.4:-31858318 | MS.gene53103:CDS |
| GGATTTAAAGATTCTAAACT+AGG | 0.480932 | 5.4:-31860837 | MS.gene53103:CDS |
| GAGCAGGATCAGCAAGGAGT+TGG | 0.481404 | 5.4:-31858302 | MS.gene53103:CDS |
| TCCACAAGACGGGTTGCTGC+AGG | 0.484401 | 5.4:-31857417 | MS.gene53103:CDS |
| TCGTTGTTGTGTCTCACTAC+AGG | 0.487102 | 5.4:+31857738 | None:intergenic |
| CTTGCCTGCTGACTTACCTA+TGG | 0.489749 | 5.4:-31857634 | MS.gene53103:CDS |
| CGAATGGCCCCTAGGAGGCC+AGG | 0.491717 | 5.4:-31857669 | MS.gene53103:CDS |
| TGGACCGAAATCTATGGATA+AGG | 0.495333 | 5.4:-31860769 | MS.gene53103:CDS |
| CTGGTGGGGAAGACAGTGAC+AGG | 0.496474 | 5.4:-31857320 | MS.gene53103:CDS |
| GGCAAGCGAATCCGTTTACC+TGG | 0.496811 | 5.4:+31857651 | None:intergenic |
| GAAACTGCTGCCCAACTTGG+AGG | 0.498037 | 5.4:+31859124 | None:intergenic |
| CAGGATCAGCAAGGAGTTGG+AGG | 0.498546 | 5.4:-31858299 | MS.gene53103:CDS |
| TCAAATTCATCAGTGAATGA+TGG | 0.500130 | 5.4:-31860807 | MS.gene53103:CDS |
| TAGTTTGTTAAGACTTCCAT+AGG | 0.502774 | 5.4:+31857618 | None:intergenic |
| TGATCAGCTTCTAGCCTGAA+TGG | 0.503853 | 5.4:+31857714 | None:intergenic |
| CTCACCTGAAGAGGGTGATA+AGG | 0.504425 | 5.4:+31862847 | None:intergenic |
| CAAAATTAGTCCGTGGACAT+TGG | 0.505657 | 5.4:-31857829 | MS.gene53103:CDS |
| TGATTACATCATAGCTTTGA+GGG | 0.506906 | 5.4:-31858324 | MS.gene53103:CDS |
| AAGTCAAGTTGTGTCAAGCT+TGG | 0.507035 | 5.4:-31857523 | MS.gene53103:CDS |
| ACCTGCAGCAACCCGTCTTG+TGG | 0.507888 | 5.4:+31857416 | None:intergenic |
| CTCACCACCACAATAACAAA+AGG | 0.508400 | 5.4:+31859092 | None:intergenic |
| GAGAAGAGCAGCAACCATAA+GGG | 0.510452 | 5.4:+31860170 | None:intergenic |
| TGTGGACGTATCCTCCAAGT+TGG | 0.513619 | 5.4:-31859135 | MS.gene53103:CDS |
| GATCTACAAGCAAGTGAAGA+TGG | 0.514816 | 5.4:-31860597 | MS.gene53103:CDS |
| CTTTACACTCTCACCTGAAG+AGG | 0.516287 | 5.4:+31862838 | None:intergenic |
| TGCTGGTCCCGCGACTCTGA+AGG | 0.520499 | 5.4:-31857385 | MS.gene53103:CDS |
| ATGATTACATCATAGCTTTG+AGG | 0.520504 | 5.4:-31858325 | MS.gene53103:CDS |
| AGTCAAGTTGTGTCAAGCTT+GGG | 0.520648 | 5.4:-31857522 | MS.gene53103:CDS |
| ACAAATTTCTATTATGAGCA+AGG | 0.522295 | 5.4:+31857190 | None:intergenic |
| TTATTCTTCAATGGTTGACT+GGG | 0.523351 | 5.4:-31859202 | MS.gene53103:CDS |
| CTGTCGAGGTCAACTAGTGA+TGG | 0.525942 | 5.4:-31857354 | MS.gene53103:CDS |
| CTTGTGGATTCGCCTTCCGC+CGG | 0.527814 | 5.4:+31857432 | None:intergenic |
| TTAAAGATTCTAAACTAGGA+GGG | 0.528591 | 5.4:-31860833 | MS.gene53103:CDS |
| ACCGCGACGGAAAGTAGAAA+AGG | 0.532238 | 5.4:+31858217 | None:intergenic |
| GTGGACGTATCCTCCAAGTT+GGG | 0.532863 | 5.4:-31859134 | MS.gene53103:CDS |
| CAGCTGATCCTGCAGATCCA+GGG | 0.547096 | 5.4:-31860911 | MS.gene53103:CDS |
| TAAAGATTCTAAACTAGGAG+GGG | 0.549174 | 5.4:-31860832 | MS.gene53103:CDS |
| GTGGATTCGCCTTCCGCCGG+AGG | 0.549298 | 5.4:+31857435 | None:intergenic |
| AGTGATGGGTATGATGCATC+TGG | 0.552086 | 5.4:-31857339 | MS.gene53103:CDS |
| ACAGCGTCTGTAAGTTCGCT+CGG | 0.552246 | 5.4:-31857903 | MS.gene53103:CDS |
| CTAGAAGCTGATCACAACTC+TGG | 0.552850 | 5.4:-31857705 | MS.gene53103:CDS |
| GGAAATTCCTTCAGAGTCGC+GGG | 0.556274 | 5.4:+31857378 | None:intergenic |
| TCTATGGATAAGGAAGCATT+CGG | 0.561155 | 5.4:-31860759 | MS.gene53103:CDS |
| AAAGATTCTAAACTAGGAGG+GGG | 0.562484 | 5.4:-31860831 | MS.gene53103:CDS |
| GGCACGGTTAAATGCAGAAG+AGG | 0.566418 | 5.4:-31857808 | MS.gene53103:CDS |
| AATATCGACAAAGGCTTCAA+CGG | 0.567522 | 5.4:-31857585 | MS.gene53103:CDS |
| TGGAAGCAGTGGACGACGAA+TGG | 0.568017 | 5.4:-31857685 | MS.gene53103:CDS |
| GAAAGATGAGGAAGAATGGA+TGG | 0.569850 | 5.4:-31862876 | None:intergenic |
| TTTAAAGATTCTAAACTAGG+AGG | 0.571859 | 5.4:-31860834 | MS.gene53103:CDS |
| CCGCCGGAGGCACACAAAAG+GGG | 0.572607 | 5.4:+31857448 | None:intergenic |
| GGAAGGCGAATCCACAAGAC+GGG | 0.575515 | 5.4:-31857427 | MS.gene53103:CDS |
| TTTAACCGTGCCAATGTCCA+CGG | 0.582849 | 5.4:+31857819 | None:intergenic |
| CCTTGCTTCAAGCTGGAGAG+AGG | 0.584787 | 5.4:+31857548 | None:intergenic |
| TGAAGGAATTTCCGCTGTCG+AGG | 0.586567 | 5.4:-31857368 | MS.gene53103:CDS |
| GTGGACGACGAATGGCCCCT+AGG | 0.588220 | 5.4:-31857677 | MS.gene53103:CDS |
| CAAGTTGTGTCAAGCTTGGG+CGG | 0.588783 | 5.4:-31857519 | MS.gene53103:CDS |
| TGATCATCCACGAACATGCG+TGG | 0.592232 | 5.4:+31858179 | None:intergenic |
| CGGAAATTCCTTCAGAGTCG+CGG | 0.592788 | 5.4:+31857377 | None:intergenic |
| AGCTGATCCTGCAGATCCAG+GGG | 0.596344 | 5.4:-31860910 | MS.gene53103:CDS |
| TCTTCCGGAAATATCGACAA+AGG | 0.601945 | 5.4:-31857594 | MS.gene53103:CDS |
| ACTTCCATAGGTAAGTCAGC+AGG | 0.602293 | 5.4:+31857630 | None:intergenic |
| GATCATCCACGAACATGCGT+GGG | 0.604806 | 5.4:+31858180 | None:intergenic |
| TGTCGAGGTCAACTAGTGAT+GGG | 0.609256 | 5.4:-31857353 | MS.gene53103:CDS |
| CCGGAGGCACACAAAAGGGG+TGG | 0.611276 | 5.4:+31857451 | None:intergenic |
| ATGGGTATGATGCATCTGGT+GGG | 0.613256 | 5.4:-31857335 | MS.gene53103:CDS |
| CCTCTCTCCAGCTTGAAGCA+AGG | 0.614361 | 5.4:-31857548 | MS.gene53103:CDS |
| GAGCTAACAGGCGACATTTG+GGG | 0.615275 | 5.4:+31858266 | None:intergenic |
| GATGGGTATGATGCATCTGG+TGG | 0.619701 | 5.4:-31857336 | MS.gene53103:CDS |
| GATCACAACTCTGGAAGCAG+TGG | 0.620612 | 5.4:-31857696 | MS.gene53103:CDS |
| ATCATCCACGAACATGCGTG+GGG | 0.626482 | 5.4:+31858181 | None:intergenic |
| TTAGTCCGTGGACATTGGCA+CGG | 0.628005 | 5.4:-31857824 | MS.gene53103:CDS |
| TTTACACTCTCACCTGAAGA+GGG | 0.628719 | 5.4:+31862839 | None:intergenic |
| CTTACAGACGCTGTTTCTGG+TGG | 0.630387 | 5.4:+31857912 | None:intergenic |
| AATGCTGATCATGATGAGAG+AGG | 0.636386 | 5.4:-31857237 | MS.gene53103:CDS |
| CATAGAAAACAGGATGGTGA+AGG | 0.640603 | 5.4:+31860678 | None:intergenic |
| CAGCTACATATATAAGCACA+AGG | 0.640943 | 5.4:+31860645 | None:intergenic |
| TTGAGGGAGCAGGATCAGCA+AGG | 0.643586 | 5.4:-31858308 | MS.gene53103:CDS |
| AGAAAACAGGATGGTGAAGG+CGG | 0.644067 | 5.4:+31860681 | None:intergenic |
| CGGAAGGCGAATCCACAAGA+CGG | 0.644365 | 5.4:-31857428 | MS.gene53103:CDS |
| GTGTGCACCATTGACCGCGA+CGG | 0.654760 | 5.4:+31858204 | None:intergenic |
| TGAACATTCACAATCCTCGT+AGG | 0.663571 | 5.4:+31857294 | None:intergenic |
| GACGACGAATGGCCCCTAGG+AGG | 0.666023 | 5.4:-31857674 | MS.gene53103:CDS |
| AAAAGCCATAGAAAACAGGA+TGG | 0.668287 | 5.4:+31860672 | None:intergenic |
| TGGGTATGATGCATCTGGTG+GGG | 0.670367 | 5.4:-31857334 | MS.gene53103:CDS |
| CCGTTTACCTGGCCTCCTAG+GGG | 0.676361 | 5.4:+31857662 | None:intergenic |
| GAGCAGTCAAAATTAGTCCG+TGG | 0.677655 | 5.4:-31857836 | MS.gene53103:CDS |
| TCACTAGTTGACCTCGACAG+CGG | 0.703975 | 5.4:+31857357 | None:intergenic |
| TCATCCACGAACATGCGTGG+GGG | 0.726713 | 5.4:+31858182 | None:intergenic |
| TGGTGGGGAAGACAGTGACA+GGG | 0.751527 | 5.4:-31857319 | MS.gene53103:CDS |
| ACAGTGACAGGGTTCCTACG+AGG | 0.755771 | 5.4:-31857308 | MS.gene53103:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTTAGTTAATGAAAA+TGG | + | chr5.4:31858044-31858063 | None:intergenic | 10.0% |
| !! | TATATCTTTATATTTAAGTA+TGG | - | chr5.4:31861947-31861966 | MS.gene53103:intron | 10.0% |
| !!! | ACTTTTTTTTTTTTTTTGAA+TGG | - | chr5.4:31857710-31857729 | MS.gene53103:CDS | 10.0% |
| !! | AAAATATTAACAAATGAAAC+AGG | + | chr5.4:31861928-31861947 | None:intergenic | 15.0% |
| !! | ATAAAAAAAGGTTGAAAAAA+GGG | + | chr5.4:31857654-31857673 | None:intergenic | 15.0% |
| !! | CAAAAAAAAAAAAAAAGTCT+TGG | + | chr5.4:31857708-31857727 | None:intergenic | 15.0% |
| !! | TATAAAAAAAGGTTGAAAAA+AGG | + | chr5.4:31857655-31857674 | None:intergenic | 15.0% |
| !! | TATATACTAACAAAATTGAA+AGG | + | chr5.4:31860284-31860303 | None:intergenic | 15.0% |
| !!! | TATAACAATTGTTGTTTTTT+TGG | - | chr5.4:31857289-31857308 | MS.gene53103:CDS | 15.0% |
| !!! | TATCAATTTTTTGATTTGTT+GGG | - | chr5.4:31857254-31857273 | MS.gene53103:CDS | 15.0% |
| !!! | TTATCAATTTTTTGATTTGT+TGG | - | chr5.4:31857253-31857272 | MS.gene53103:CDS | 15.0% |
| !!! | TTTAATACTTTAAAAAAACG+TGG | - | chr5.4:31860140-31860159 | MS.gene53103:intron | 15.0% |
| !! | AAAAAAAAAAAAAAAGCAGC+AGG | + | chr5.4:31858751-31858770 | None:intergenic | 20.0% |
| !! | AATATTAGAGAAGACATTAT+GGG | - | chr5.4:31858063-31858082 | MS.gene53103:intron | 20.0% |
| !! | ATAAATGGAAATTAGACAAA+TGG | - | chr5.4:31857939-31857958 | MS.gene53103:intron | 20.0% |
| !! | ATAGCTACAACTATAAAAAA+AGG | + | chr5.4:31857666-31857685 | None:intergenic | 20.0% |
| !! | ATTTATCAGTATATTGTTAC+TGG | - | chr5.4:31857394-31857413 | MS.gene53103:CDS | 20.0% |
| !! | CATAAATAAACAATGAACAA+AGG | + | chr5.4:31857816-31857835 | None:intergenic | 20.0% |
| !! | CATTATCAAAAACAAGATAA+AGG | + | chr5.4:31857456-31857475 | None:intergenic | 20.0% |
| !! | TAATATTAGAGAAGACATTA+TGG | - | chr5.4:31858062-31858081 | MS.gene53103:intron | 20.0% |
| !! | TATACAAATGAAAAGAAGTA+TGG | + | chr5.4:31861245-31861264 | None:intergenic | 20.0% |
| !! | TATTTGATTATGTAGATCTT+AGG | - | chr5.4:31858671-31858690 | MS.gene53103:intron | 20.0% |
| !! | TCATATTCTTCTCATTAAAA+AGG | - | chr5.4:31861181-31861200 | MS.gene53103:intron | 20.0% |
| !! | TTAATCAAATGAAATTGACT+AGG | + | chr5.4:31860786-31860805 | None:intergenic | 20.0% |
| !! | TTCAAACTTCAAAGTTAAAA+TGG | - | chr5.4:31860504-31860523 | MS.gene53103:intron | 20.0% |
| !! | TTGACATTTCAAAAAGTTAA+AGG | - | chr5.4:31861340-31861359 | MS.gene53103:intron | 20.0% |
| !! | TTTATTAGTATATTCTACTG+AGG | + | chr5.4:31860483-31860502 | None:intergenic | 20.0% |
| !!! | AAATTTAAAATGCCTACTAT+GGG | + | chr5.4:31860763-31860782 | None:intergenic | 20.0% |
| !!! | ATCTTGAAATGATTTTATTC+TGG | - | chr5.4:31859578-31859597 | MS.gene53103:intron | 20.0% |
| !!! | CTTTTCTTTTCTTTACTTAT+TGG | - | chr5.4:31859772-31859791 | MS.gene53103:intron | 20.0% |
| !!! | TTTACGAAAAGTATAGAATT+AGG | - | chr5.4:31858624-31858643 | MS.gene53103:intron | 20.0% |
| !!! | TTTGAACAAATCTCTATTTT+TGG | - | chr5.4:31858959-31858978 | MS.gene53103:intron | 20.0% |
| !!! | TTTTACTAAATACTGTATCA+CGG | + | chr5.4:31858895-31858914 | None:intergenic | 20.0% |
| ! | AAAGAAAAAAAGCTGAACAA+GGG | + | chr5.4:31861162-31861181 | None:intergenic | 25.0% |
| ! | AAAGGAAATTGACATTCATA+TGG | - | chr5.4:31861358-31861377 | MS.gene53103:intron | 25.0% |
| ! | AAGGAAATTGACATTCATAT+GGG | - | chr5.4:31861359-31861378 | MS.gene53103:intron | 25.0% |
| ! | ACAAAAGTAACTAGAAAAGA+AGG | + | chr5.4:31860068-31860087 | None:intergenic | 25.0% |
| ! | ACAAATTTCTATTATGAGCA+AGG | + | chr5.4:31862872-31862891 | None:intergenic | 25.0% |
| ! | ACCAACTGTGTTATAAAATT+GGG | - | chr5.4:31859552-31859571 | MS.gene53103:intron | 25.0% |
| ! | ACCTATACTCGAAAATTAAA+TGG | + | chr5.4:31858439-31858458 | None:intergenic | 25.0% |
| ! | ATCATTTACTGAGAATACTA+TGG | - | chr5.4:31862045-31862064 | MS.gene53103:intron | 25.0% |
| ! | CTTATACAATGATATTGCTA+GGG | + | chr5.4:31859966-31859985 | None:intergenic | 25.0% |
| ! | GATTGTAGTGCTAAATATTA+TGG | - | chr5.4:31861679-31861698 | MS.gene53103:intron | 25.0% |
| ! | GCTAAATATTATGGTTATTG+TGG | - | chr5.4:31861688-31861707 | MS.gene53103:intron | 25.0% |
| ! | GGAAAAATACTAACCAATAA+TGG | + | chr5.4:31860263-31860282 | None:intergenic | 25.0% |
| ! | GGATTTAAAGATTCTAAACT+AGG | - | chr5.4:31859222-31859241 | MS.gene53103:intron | 25.0% |
| ! | GTAAAATCTTGAAACTGAAA+AGG | + | chr5.4:31858609-31858628 | None:intergenic | 25.0% |
| ! | GTATTGGAAAAAAGAACTAT+CGG | - | chr5.4:31859856-31859875 | MS.gene53103:intron | 25.0% |
| ! | TACCAACTGTGTTATAAAAT+TGG | - | chr5.4:31859551-31859570 | MS.gene53103:intron | 25.0% |
| ! | TCATTTGATTAACTATTGAC+AGG | - | chr5.4:31860794-31860813 | MS.gene53103:CDS | 25.0% |
| ! | TCTCATCAATGAACAATAAA+TGG | - | chr5.4:31857924-31857943 | MS.gene53103:CDS | 25.0% |
| ! | TTAAAGATTCTAAACTAGGA+GGG | - | chr5.4:31859226-31859245 | MS.gene53103:intron | 25.0% |
| ! | TTCATAGATCAACAACAAAT+TGG | - | chr5.4:31862784-31862803 | MS.gene53103:intron | 25.0% |
| ! | TTTAAAGATTCTAAACTAGG+AGG | - | chr5.4:31859225-31859244 | MS.gene53103:intron | 25.0% |
| !! | AACTCAAACTAGTTTGAATT+TGG | + | chr5.4:31857979-31857998 | None:intergenic | 25.0% |
| !! | AATTCTGAAAATTAAGAGTC+TGG | - | chr5.4:31857771-31857790 | MS.gene53103:CDS | 25.0% |
| !! | AATTTAAAATGCCTACTATG+GGG | + | chr5.4:31860762-31860781 | None:intergenic | 25.0% |
| !! | ACATATTCCTTTCTTTTTAC+AGG | - | chr5.4:31861100-31861119 | MS.gene53103:intron | 25.0% |
| !! | CTTGTTATATAGATGTATGA+AGG | - | chr5.4:31859044-31859063 | MS.gene53103:intron | 25.0% |
| !! | GAAATTGATTGATTTACCAA+AGG | + | chr5.4:31857430-31857449 | None:intergenic | 25.0% |
| !! | GAAATTTAAAATGCCTACTA+TGG | + | chr5.4:31860764-31860783 | None:intergenic | 25.0% |
| !! | TATCATGAAGTATTAGATCA+TGG | + | chr5.4:31859530-31859549 | None:intergenic | 25.0% |
| !! | TGATTTTCATAAATCATCGA+AGG | + | chr5.4:31862029-31862048 | None:intergenic | 25.0% |
| !! | TTGTTCAATCAATTGTGTTT+TGG | - | chr5.4:31857566-31857585 | MS.gene53103:CDS | 25.0% |
| !!! | AATCAATTGTGTTTTGGAAT+TGG | - | chr5.4:31857572-31857591 | MS.gene53103:CDS | 25.0% |
| !!! | ACCATTTAATTTTCGAGTAT+AGG | - | chr5.4:31858435-31858454 | MS.gene53103:intron | 25.0% |
| !!! | ATGGTAAGATTTGATTTGTA+CGG | + | chr5.4:31859994-31860013 | None:intergenic | 25.0% |
| !!! | ATGTTTTGTTCATTTCATTG+TGG | - | chr5.4:31858700-31858719 | MS.gene53103:intron | 25.0% |
| !!! | ATTTAACTTTCCTCATGTTT+TGG | - | chr5.4:31860204-31860223 | MS.gene53103:CDS | 25.0% |
| !!! | GAATGGTATTTTGAGAAATT+AGG | + | chr5.4:31860042-31860061 | None:intergenic | 25.0% |
| !!! | TTGTTGTTTTTTTGGTTTGA+AGG | - | chr5.4:31857297-31857316 | MS.gene53103:CDS | 25.0% |
| !!! | TTTGAGTTTTTAACATCTGA+GGG | - | chr5.4:31857991-31858010 | MS.gene53103:intron | 25.0% |
| AAAATATAAAGGCCATTGGT+AGG | + | chr5.4:31861427-31861446 | None:intergenic | 30.0% | |
| AAAATCCAAGTAAATCGTTC+AGG | + | chr5.4:31859819-31859838 | None:intergenic | 30.0% | |
| AAATTAGTATGACCCATTAG+TGG | + | chr5.4:31857892-31857911 | None:intergenic | 30.0% | |
| AAGAAAAAAAGCTGAACAAG+GGG | + | chr5.4:31861161-31861180 | None:intergenic | 30.0% | |
| AATTTCTTGAGAGCCATTAT+TGG | - | chr5.4:31860247-31860266 | MS.gene53103:intron | 30.0% | |
| ACAAGATCTTTAGTAAGTAG+TGG | - | chr5.4:31860117-31860136 | MS.gene53103:intron | 30.0% | |
| ACTGTCTCTATATTTGATGA+AGG | - | chr5.4:31857596-31857615 | MS.gene53103:CDS | 30.0% | |
| AGAGAGATAGACATATGTAA+CGG | - | chr5.4:31857836-31857855 | MS.gene53103:CDS | 30.0% | |
| ATAAAGAGTCTACATAAAGC+AGG | + | chr5.4:31858780-31858799 | None:intergenic | 30.0% | |
| ATGAACCTAAACATAAGGAA+AGG | - | chr5.4:31860568-31860587 | MS.gene53103:CDS | 30.0% | |
| ATTAGTATATTCTACTGAGG+TGG | + | chr5.4:31860480-31860499 | None:intergenic | 30.0% | |
| CATCACACTGTAATTTGAAT+AGG | - | chr5.4:31860092-31860111 | MS.gene53103:intron | 30.0% | |
| CCAGTTAAGAAAAAGAATAC+AGG | - | chr5.4:31862201-31862220 | MS.gene53103:intron | 30.0% | |
| CCTCAAAAAGGATATGATAA+GGG | + | chr5.4:31858286-31858305 | None:intergenic | 30.0% | |
| CTATTCAAATTACAGTGTGA+TGG | + | chr5.4:31860094-31860113 | None:intergenic | 30.0% | |
| GAAAGAAAAAAAGCTGAACA+AGG | + | chr5.4:31861163-31861182 | None:intergenic | 30.0% | |
| GATAACGATTATTGGTCAAA+TGG | + | chr5.4:31861988-31862007 | None:intergenic | 30.0% | |
| GCTTATACAATGATATTGCT+AGG | + | chr5.4:31859967-31859986 | None:intergenic | 30.0% | |
| GGTTGAATGTGTAAATGATA+AGG | + | chr5.4:31859945-31859964 | None:intergenic | 30.0% | |
| GTAAATGATAAGGAATGCAT+AGG | + | chr5.4:31859935-31859954 | None:intergenic | 30.0% | |
| GTCTTAACAAACTATTCTTC+CGG | - | chr5.4:31862450-31862469 | MS.gene53103:intron | 30.0% | |
| GTTTACCTTTCCTTATGTTT+AGG | + | chr5.4:31860576-31860595 | None:intergenic | 30.0% | |
| TAAAGATTCTAAACTAGGAG+GGG | - | chr5.4:31859227-31859246 | MS.gene53103:intron | 30.0% | |
| TAAATCTTCTTCCCAACAAA+AGG | + | chr5.4:31857379-31857398 | None:intergenic | 30.0% | |
| TAACACTGACACATAAACTT+TGG | + | chr5.4:31861618-31861637 | None:intergenic | 30.0% | |
| TCAAATTCATCAGTGAATGA+TGG | - | chr5.4:31859252-31859271 | MS.gene53103:intron | 30.0% | |
| TGATTATGTAGATCTTAGGT+TGG | - | chr5.4:31858675-31858694 | MS.gene53103:intron | 30.0% | |
| TGATTCAATATCCCTCAAAA+AGG | + | chr5.4:31858298-31858317 | None:intergenic | 30.0% | |
| TGCTTTATGTAGACTCTTTA+TGG | - | chr5.4:31858779-31858798 | MS.gene53103:intron | 30.0% | |
| TTATTCTTCAATGGTTGACT+GGG | - | chr5.4:31860857-31860876 | MS.gene53103:CDS | 30.0% | |
| TTTGTTAGTATATACTGCTG+AGG | - | chr5.4:31860290-31860309 | MS.gene53103:intron | 30.0% | |
| ! | ACAAGTACAGTTTAAAGTCT+TGG | + | chr5.4:31857745-31857764 | None:intergenic | 30.0% |
| ! | ACGTTAATATTTTGCAGCTA+TGG | - | chr5.4:31860173-31860192 | MS.gene53103:CDS | 30.0% |
| ! | ATGATTACATCATAGCTTTG+AGG | - | chr5.4:31861734-31861753 | MS.gene53103:intron | 30.0% |
| ! | ATTTAAAATGCCTACTATGG+GGG | + | chr5.4:31860761-31860780 | None:intergenic | 30.0% |
| ! | CCTGTATTCTTTTTCTTAAC+TGG | + | chr5.4:31862204-31862223 | None:intergenic | 30.0% |
| ! | CCTTATCATATCCTTTTTGA+GGG | - | chr5.4:31858284-31858303 | MS.gene53103:CDS | 30.0% |
| ! | GCAATATTGATGATATGAGA+AGG | - | chr5.4:31859632-31859651 | MS.gene53103:intron | 30.0% |
| ! | TCCCAATTTTATAACACAGT+TGG | + | chr5.4:31859556-31859575 | None:intergenic | 30.0% |
| !! | AGACATATGTAACGGATTAA+TGG | - | chr5.4:31857844-31857863 | MS.gene53103:CDS | 30.0% |
| !! | ATGGAACTCATTTTAATACG+CGG | - | chr5.4:31857863-31857882 | MS.gene53103:CDS | 30.0% |
| !! | GCTTTCTTGATAACGATTAT+TGG | + | chr5.4:31861996-31862015 | None:intergenic | 30.0% |
| !! | GTTTGAGTTTTTAACATCTG+AGG | - | chr5.4:31857990-31858009 | MS.gene53103:intron | 30.0% |
| !! | TAGTTTGTTAAGACTTCCAT+AGG | + | chr5.4:31862444-31862463 | None:intergenic | 30.0% |
| !! | TGATTACATCATAGCTTTGA+GGG | - | chr5.4:31861735-31861754 | MS.gene53103:intron | 30.0% |
| !!! | ATTGCTGTTTTTTTAGCTCT+TGG | - | chr5.4:31857328-31857347 | MS.gene53103:CDS | 30.0% |
| !!! | GCAGATCAATATTTTTTGTC+TGG | - | chr5.4:31859010-31859029 | MS.gene53103:intron | 30.0% |
| !!! | TTGTTTTTTTGGTTTGAAGG+TGG | - | chr5.4:31857300-31857319 | MS.gene53103:CDS | 30.0% |
| !!! | TTTACACTTTTTCCTACCAA+TGG | - | chr5.4:31861412-31861431 | MS.gene53103:intron | 30.0% |
| !!! | TTTTTTGACTTAAAAACCCC+TGG | + | chr5.4:31859168-31859187 | None:intergenic | 30.0% |
| AAAAGCCATAGAAAACAGGA+TGG | + | chr5.4:31859390-31859409 | None:intergenic | 35.0% | |
| AAAGATTCTAAACTAGGAGG+GGG | - | chr5.4:31859228-31859247 | MS.gene53103:intron | 35.0% | |
| AACTATTGGACCGAAATCTA+TGG | - | chr5.4:31859284-31859303 | MS.gene53103:intron | 35.0% | |
| AATATCGACAAAGGCTTCAA+CGG | - | chr5.4:31862474-31862493 | MS.gene53103:intron | 35.0% | |
| AATGATAAGGAATGCATAGG+TGG | + | chr5.4:31859932-31859951 | None:intergenic | 35.0% | |
| ACTAGCTATAACAGTGCTAT+AGG | - | chr5.4:31858927-31858946 | MS.gene53103:CDS | 35.0% | |
| ACTATTGACAGGTATGTACA+TGG | - | chr5.4:31860805-31860824 | MS.gene53103:CDS | 35.0% | |
| AGAGAAAAGCCATAGAAAAC+AGG | + | chr5.4:31859394-31859413 | None:intergenic | 35.0% | |
| ATAGATGTAACAACATGTGC+CGG | + | chr5.4:31861571-31861590 | None:intergenic | 35.0% | |
| ATAGGTGACAATTCACTACT+AGG | - | chr5.4:31858453-31858472 | MS.gene53103:intron | 35.0% | |
| ATATTCTACTGAGGTGGTAT+GGG | + | chr5.4:31860474-31860493 | None:intergenic | 35.0% | |
| ATTGAGAATGATGTTGATGC+AGG | - | chr5.4:31859662-31859681 | MS.gene53103:intron | 35.0% | |
| CAAATAGCCTCATTTCATTG+AGG | - | chr5.4:31858821-31858840 | MS.gene53103:intron | 35.0% | |
| CACTAGAAAGAATGCATTCT+CGG | + | chr5.4:31858162-31858181 | None:intergenic | 35.0% | |
| CAGAAGTAATCCAAAACATG+AGG | + | chr5.4:31860217-31860236 | None:intergenic | 35.0% | |
| CAGCTACATATATAAGCACA+AGG | + | chr5.4:31859417-31859436 | None:intergenic | 35.0% | |
| CAGTGGCTTAATAACTGTAT+TGG | - | chr5.4:31859840-31859859 | MS.gene53103:intron | 35.0% | |
| CATACTGCCTGTAAAAAGAA+AGG | + | chr5.4:31861110-31861129 | None:intergenic | 35.0% | |
| CCCTCAAAAAGGATATGATA+AGG | + | chr5.4:31858287-31858306 | None:intergenic | 35.0% | |
| CTCTCTCTCTTATGTATTGA+GGG | + | chr5.4:31860417-31860436 | None:intergenic | 35.0% | |
| CTTATTCTTCAATGGTTGAC+TGG | - | chr5.4:31860856-31860875 | MS.gene53103:CDS | 35.0% | |
| CTTCCAACAAGTAGTAAGTT+GGG | + | chr5.4:31860715-31860734 | None:intergenic | 35.0% | |
| GAAGAGAAATGTTCAAGTAC+TGG | + | chr5.4:31860662-31860681 | None:intergenic | 35.0% | |
| GATATCCTGGTTCAAACATT+AGG | + | chr5.4:31858340-31858359 | None:intergenic | 35.0% | |
| GATGGAAATGCTTCAACTAT+TGG | - | chr5.4:31859270-31859289 | MS.gene53103:intron | 35.0% | |
| GATTGCAGCTTATTCTTCAA+TGG | - | chr5.4:31860848-31860867 | MS.gene53103:CDS | 35.0% | |
| GCGAAATGAACCTAAACATA+AGG | - | chr5.4:31860563-31860582 | MS.gene53103:intron | 35.0% | |
| GCTAATGATTTAGTGACAGT+TGG | + | chr5.4:31858576-31858595 | None:intergenic | 35.0% | |
| GCTATATCCTCAATGAAATG+AGG | + | chr5.4:31858831-31858850 | None:intergenic | 35.0% | |
| GCTTCCTTATCCATAGATTT+CGG | + | chr5.4:31859297-31859316 | None:intergenic | 35.0% | |
| GGGAAAAATATAAAGGCCAT+TGG | + | chr5.4:31861431-31861450 | None:intergenic | 35.0% | |
| GTTAAAATGGTGACCAAAAG+CGG | - | chr5.4:31860517-31860536 | MS.gene53103:intron | 35.0% | |
| TAAACACCCTAAAGTAACAC+AGG | - | chr5.4:31858256-31858275 | MS.gene53103:CDS | 35.0% | |
| TATATTCTACTGAGGTGGTA+TGG | + | chr5.4:31860475-31860494 | None:intergenic | 35.0% | |
| TCTCTCTCTCTTATGTATTG+AGG | + | chr5.4:31860418-31860437 | None:intergenic | 35.0% | |
| TCTCTCTCTTATGTATTGAG+GGG | + | chr5.4:31860416-31860435 | None:intergenic | 35.0% | |
| TCTTTACTGTGATAGAGAGA+TGG | + | chr5.4:31858190-31858209 | None:intergenic | 35.0% | |
| TGTCTATGTTAGTGCTTCAT+AGG | - | chr5.4:31861657-31861676 | MS.gene53103:intron | 35.0% | |
| TTCAAATTACAGTGTGATGG+AGG | + | chr5.4:31860091-31860110 | None:intergenic | 35.0% | |
| TTCCAGATTACTTGTGTCTT+TGG | - | chr5.4:31859105-31859124 | MS.gene53103:CDS | 35.0% | |
| TTCTAATCTTGCATCCTTGT+CGG | - | chr5.4:31858520-31858539 | MS.gene53103:intron | 35.0% | |
| ! | AGAAATCATATTTTCCCTCC+AGG | + | chr5.4:31861452-31861471 | None:intergenic | 35.0% |
| ! | ATGAAGCACTAACATAGACA+CGG | + | chr5.4:31861657-31861676 | None:intergenic | 35.0% |
| ! | ATGGCCTTTATATTTTTCCC+TGG | - | chr5.4:31861431-31861450 | MS.gene53103:intron | 35.0% |
| ! | CAAATTTTGCAATGGCTTCT+TGG | - | chr5.4:31858395-31858414 | MS.gene53103:intron | 35.0% |
| ! | CCCTTATCATATCCTTTTTG+AGG | - | chr5.4:31858283-31858302 | MS.gene53103:CDS | 35.0% |
| ! | CCTTTATATTTTTCCCTGGA+GGG | - | chr5.4:31861435-31861454 | MS.gene53103:intron | 35.0% |
| ! | GAAATCATATTTTCCCTCCA+GGG | + | chr5.4:31861451-31861470 | None:intergenic | 35.0% |
| ! | GATTTACTTGGATTTTGCAG+TGG | - | chr5.4:31859823-31859842 | MS.gene53103:intron | 35.0% |
| ! | GGTAGCATCAAATTTTGCAA+TGG | - | chr5.4:31858387-31858406 | MS.gene53103:intron | 35.0% |
| ! | TGTTCTTTGCTCCTTTTGTT+GGG | - | chr5.4:31857365-31857384 | MS.gene53103:CDS | 35.0% |
| !! | AAATGTTCAAGTACTGGACA+AGG | + | chr5.4:31860656-31860675 | None:intergenic | 35.0% |
| !! | GCAAAAAAAGTGCTATATGC+TGG | - | chr5.4:31858542-31858561 | MS.gene53103:intron | 35.0% |
| !! | TCTATGGATAAGGAAGCATT+CGG | - | chr5.4:31859300-31859319 | MS.gene53103:intron | 35.0% |
| !!! | TCGGAATTTTTTCACCCTTA+TGG | - | chr5.4:31859875-31859894 | MS.gene53103:intron | 35.0% |
| !!! | TCTGGTTCCTTTTGTTATTG+TGG | - | chr5.4:31860960-31860979 | MS.gene53103:intron | 35.0% |
| !!! | TTATCTGCTGTTTTCTCAAG+AGG | - | chr5.4:31860890-31860909 | MS.gene53103:CDS | 35.0% |
| !!! | TTTTTTTCTTGCTTCTGCAG+CGG | + | chr5.4:31862286-31862305 | None:intergenic | 35.0% |
| !!! | TTTTTTTGGTTTGAAGGTGG+TGG | - | chr5.4:31857303-31857322 | MS.gene53103:CDS | 35.0% |
| AAAAAGCTGAACAAGGGGTA+AGG | + | chr5.4:31861156-31861175 | None:intergenic | 40.0% | |
| AAATTAGGTACCCACAATGC+TGG | + | chr5.4:31860027-31860046 | None:intergenic | 40.0% | |
| AAGCCCAACTTACTACTTGT+TGG | - | chr5.4:31860709-31860728 | MS.gene53103:CDS | 40.0% | |
| AATGCTGATCATGATGAGAG+AGG | - | chr5.4:31862822-31862841 | MS.gene53103:intron | 40.0% | |
| ACATTCAAGGCAAGATATCC+TGG | + | chr5.4:31858353-31858372 | None:intergenic | 40.0% | |
| ACCAAGCGATGTTTGATGTT+TGG | - | chr5.4:31860594-31860613 | MS.gene53103:CDS | 40.0% | |
| ACTAGAAAAGAAGGCGAGAA+TGG | + | chr5.4:31860059-31860078 | None:intergenic | 40.0% | |
| AGGATATCTTGCCTTGAATG+TGG | - | chr5.4:31858352-31858371 | MS.gene53103:intron | 40.0% | |
| AGTCCAGTAATTGAGCTAAC+AGG | + | chr5.4:31861808-31861827 | None:intergenic | 40.0% | |
| ATGAGGCTATTTGACAACAC+TGG | + | chr5.4:31858814-31858833 | None:intergenic | 40.0% | |
| CAAAATTAGTCCGTGGACAT+TGG | - | chr5.4:31862230-31862249 | MS.gene53103:intron | 40.0% | |
| CATAGAAAACAGGATGGTGA+AGG | + | chr5.4:31859384-31859403 | None:intergenic | 40.0% | |
| CCCTCCAGGGAAAAATATAA+AGG | + | chr5.4:31861438-31861457 | None:intergenic | 40.0% | |
| CTCACCACCACAATAACAAA+AGG | + | chr5.4:31860970-31860989 | None:intergenic | 40.0% | |
| GAAGCCTTTGTCGATATTTC+CGG | + | chr5.4:31862472-31862491 | None:intergenic | 40.0% | |
| GACACAAGTAATCTGGAAAG+AGG | + | chr5.4:31859103-31859122 | None:intergenic | 40.0% | |
| GATCTACAAGCAAGTGAAGA+TGG | - | chr5.4:31859462-31859481 | MS.gene53103:intron | 40.0% | |
| GCTTCCAACAAGTAGTAAGT+TGG | + | chr5.4:31860716-31860735 | None:intergenic | 40.0% | |
| GTCAGTGTTAGTGTTGTGTA+TGG | - | chr5.4:31861628-31861647 | MS.gene53103:intron | 40.0% | |
| GTCCAAAGACACAAGTAATC+TGG | + | chr5.4:31859110-31859129 | None:intergenic | 40.0% | |
| GTGTCTTTGGACTGTACATA+TGG | - | chr5.4:31859118-31859137 | MS.gene53103:CDS | 40.0% | |
| GTGTTTACTTTGTACGTGAG+TGG | + | chr5.4:31858243-31858262 | None:intergenic | 40.0% | |
| GTTAGTATATACTGCTGAGG+TGG | - | chr5.4:31860293-31860312 | MS.gene53103:intron | 40.0% | |
| TCTAAGCTCTGTCTTCAATC+TGG | - | chr5.4:31857529-31857548 | MS.gene53103:CDS | 40.0% | |
| TCTCAAAGTAGCCACATTCA+AGG | + | chr5.4:31858366-31858385 | None:intergenic | 40.0% | |
| TCTTCCGGAAATATCGACAA+AGG | - | chr5.4:31862465-31862484 | MS.gene53103:intron | 40.0% | |
| TCTTTCCTGATTGTATGCGA+TGG | - | chr5.4:31862098-31862117 | MS.gene53103:intron | 40.0% | |
| TGAACATTCACAATCCTCGT+AGG | + | chr5.4:31862768-31862787 | None:intergenic | 40.0% | |
| TGACAATACCTCTTTGACTG+AGG | - | chr5.4:31860371-31860390 | MS.gene53103:CDS | 40.0% | |
| TGGACCGAAATCTATGGATA+AGG | - | chr5.4:31859290-31859309 | MS.gene53103:intron | 40.0% | |
| TTTACACTCTCACCTGAAGA+GGG | + | chr5.4:31857223-31857242 | None:intergenic | 40.0% | |
| ! | AAGTCAAGTTGTGTCAAGCT+TGG | - | chr5.4:31862536-31862555 | MS.gene53103:intron | 40.0% |
| ! | AATATCCTGAGAACCGCTTT+TGG | + | chr5.4:31860533-31860552 | None:intergenic | 40.0% |
| ! | ACAAGTAGTAAGTTGGGCTT+AGG | + | chr5.4:31860709-31860728 | None:intergenic | 40.0% |
| ! | AGTCAAGTTGTGTCAAGCTT+GGG | - | chr5.4:31862537-31862556 | MS.gene53103:intron | 40.0% |
| ! | ATGTCTTCAATCTGGAGTGT+AGG | + | chr5.4:31861516-31861535 | None:intergenic | 40.0% |
| ! | CAAGAGGAAGGAATTTTCTG+TGG | - | chr5.4:31860906-31860925 | MS.gene53103:CDS | 40.0% |
| ! | CTGTAGTTTGTGTGAAGTTG+AGG | - | chr5.4:31859494-31859513 | MS.gene53103:intron | 40.0% |
| ! | CTTCACCATCCTGTTTTCTA+TGG | - | chr5.4:31859382-31859401 | MS.gene53103:intron | 40.0% |
| ! | GCAAGGCTAGATGATGATTT+TGG | + | chr5.4:31862855-31862874 | None:intergenic | 40.0% |
| ! | GCCTTTATATTTTTCCCTGG+AGG | - | chr5.4:31861434-31861453 | MS.gene53103:intron | 40.0% |
| ! | GGTTGAAAAAAGGGCATAAC+AGG | + | chr5.4:31857645-31857664 | None:intergenic | 40.0% |
| ! | GTACATGGTTTGTGCACATT+GGG | - | chr5.4:31860820-31860839 | MS.gene53103:CDS | 40.0% |
| ! | GTGTTCTTTGCTCCTTTTGT+TGG | - | chr5.4:31857364-31857383 | MS.gene53103:CDS | 40.0% |
| ! | TACATGGTTTGTGCACATTG+GGG | - | chr5.4:31860821-31860840 | MS.gene53103:CDS | 40.0% |
| ! | TGAAGCACTAACATAGACAC+GGG | + | chr5.4:31861656-31861675 | None:intergenic | 40.0% |
| ! | TGAATGTGGCTACTTTGAGA+CGG | - | chr5.4:31858366-31858385 | MS.gene53103:intron | 40.0% |
| ! | TGTACATGGTTTGTGCACAT+TGG | - | chr5.4:31860819-31860838 | MS.gene53103:CDS | 40.0% |
| !! | GGCAATCCTGTGTTACTTTA+GGG | + | chr5.4:31858265-31858284 | None:intergenic | 40.0% |
| !! | TTGAGGGGTATTAAGTTAGC+CGG | + | chr5.4:31860401-31860420 | None:intergenic | 40.0% |
| !!! | GGTTCCTTTTGTTATTGTGG+TGG | - | chr5.4:31860963-31860982 | MS.gene53103:intron | 40.0% |
| !!! | TAGCACTTTTTTTGCCGACA+AGG | + | chr5.4:31858537-31858556 | None:intergenic | 40.0% |
| AATACGCGGACTCCACTAAT+GGG | - | chr5.4:31857877-31857896 | MS.gene53103:CDS | 45.0% | |
| ACACAAAAGGGGTGGATATC+AGG | + | chr5.4:31862603-31862622 | None:intergenic | 45.0% | |
| ACTTCCATAGGTAAGTCAGC+AGG | + | chr5.4:31862432-31862451 | None:intergenic | 45.0% | |
| AGAAAACAGGATGGTGAAGG+CGG | + | chr5.4:31859381-31859400 | None:intergenic | 45.0% | |
| AGAGAAGAGCAGCAACCATA+AGG | + | chr5.4:31859893-31859912 | None:intergenic | 45.0% | |
| ATGGGTATGATGCATCTGGT+GGG | - | chr5.4:31862724-31862743 | MS.gene53103:CDS | 45.0% | |
| CAATGCTGGTGATCTAGAGA+TGG | + | chr5.4:31860013-31860032 | None:intergenic | 45.0% | |
| CACCTGACATGTCTTCAATC+TGG | + | chr5.4:31861524-31861543 | None:intergenic | 45.0% | |
| CCAAGTAAATCGTTCAGGTC+AGG | + | chr5.4:31859814-31859833 | None:intergenic | 45.0% | |
| CCAGACAGCAAAAAGCTTAG+TGG | - | chr5.4:31859201-31859220 | MS.gene53103:CDS | 45.0% | |
| CCTAAAGAAACCCCCATAGT+AGG | - | chr5.4:31860748-31860767 | MS.gene53103:CDS | 45.0% | |
| CCTACTATGGGGGTTTCTTT+AGG | + | chr5.4:31860751-31860770 | None:intergenic | 45.0% | |
| CCTGACCTGAACGATTTACT+TGG | - | chr5.4:31859811-31859830 | MS.gene53103:intron | 45.0% | |
| CTACATAGCAACCATCGTCA+TGG | + | chr5.4:31861491-31861510 | None:intergenic | 45.0% | |
| CTAGAAGCTGATCACAACTC+TGG | - | chr5.4:31862354-31862373 | MS.gene53103:intron | 45.0% | |
| CTCCAGATTGAAGACATGTC+AGG | - | chr5.4:31861519-31861538 | MS.gene53103:intron | 45.0% | |
| CTCTAGATCACCAGCATTGT+GGG | - | chr5.4:31860014-31860033 | MS.gene53103:intron | 45.0% | |
| CTTTACACTCTCACCTGAAG+AGG | + | chr5.4:31857224-31857243 | None:intergenic | 45.0% | |
| GAGAAGAGCAGCAACCATAA+GGG | + | chr5.4:31859892-31859911 | None:intergenic | 45.0% | |
| GAGCAGTCAAAATTAGTCCG+TGG | - | chr5.4:31862223-31862242 | MS.gene53103:intron | 45.0% | |
| GCAAACCATCGCATACAATC+AGG | + | chr5.4:31862106-31862125 | None:intergenic | 45.0% | |
| GCCAAACATCAAACATCGCT+TGG | + | chr5.4:31860598-31860617 | None:intergenic | 45.0% | |
| GCTGGAATGACAGTTGGTTA+TGG | + | chr5.4:31858221-31858240 | None:intergenic | 45.0% | |
| GGCGAATCTAAACTGCTTTC+CGG | + | chr5.4:31862582-31862601 | None:intergenic | 45.0% | |
| GTGAGCCTAATGTTTGAACC+AGG | - | chr5.4:31858332-31858351 | MS.gene53103:CDS | 45.0% | |
| GTTACCTTATCACCCTCTTC+AGG | - | chr5.4:31857208-31857227 | MS.gene53103:CDS | 45.0% | |
| TAATACGCGGACTCCACTAA+TGG | - | chr5.4:31857876-31857895 | MS.gene53103:CDS | 45.0% | |
| TACTGGACTCTACACACCTT+TGG | - | chr5.4:31857411-31857430 | MS.gene53103:CDS | 45.0% | |
| TATGGTTGCTGCTCTTCTCT+TGG | - | chr5.4:31859893-31859912 | MS.gene53103:intron | 45.0% | |
| TCACTTCATTGCGTCTTCGA+TGG | - | chr5.4:31858477-31858496 | MS.gene53103:intron | 45.0% | |
| TCGCCTGTTAGCTCAATTAC+TGG | - | chr5.4:31861802-31861821 | MS.gene53103:intron | 45.0% | |
| TCGTTGTTGTGTCTCACTAC+AGG | + | chr5.4:31862324-31862343 | None:intergenic | 45.0% | |
| TCTCTAGATCACCAGCATTG+TGG | - | chr5.4:31860013-31860032 | MS.gene53103:intron | 45.0% | |
| TGAGCTAACAGGCGACATTT+GGG | + | chr5.4:31861797-31861816 | None:intergenic | 45.0% | |
| TGATCAGCTTCTAGCCTGAA+TGG | + | chr5.4:31862348-31862367 | None:intergenic | 45.0% | |
| TGTCGAGGTCAACTAGTGAT+GGG | - | chr5.4:31862706-31862725 | MS.gene53103:CDS | 45.0% | |
| TTAAAAACCCCTGGATCTGC+AGG | + | chr5.4:31859159-31859178 | None:intergenic | 45.0% | |
| TTACTTTGTACGTGAGTGGC+TGG | + | chr5.4:31858239-31858258 | None:intergenic | 45.0% | |
| TTGAGCTAACAGGCGACATT+TGG | + | chr5.4:31861798-31861817 | None:intergenic | 45.0% | |
| TTTAACCGTGCCAATGTCCA+CGG | + | chr5.4:31862243-31862262 | None:intergenic | 45.0% | |
| ! | ACAGGCAGTATGCACGATTT+TGG | - | chr5.4:31861118-31861137 | MS.gene53103:intron | 45.0% |
| ! | GAACTTACAGACGCTGTTTC+TGG | + | chr5.4:31862153-31862172 | None:intergenic | 45.0% |
| ! | GGGTAGTGTTGTTCGATAGA+AGG | + | chr5.4:31860454-31860473 | None:intergenic | 45.0% |
| ! | GGTTATTGTGGAGTACCTCA+GGG | - | chr5.4:31861700-31861719 | MS.gene53103:intron | 45.0% |
| ! | GTAGTAAGTTGGGCTTAGGA+AGG | + | chr5.4:31860705-31860724 | None:intergenic | 45.0% |
| ! | TCCTTTTCTACTTTCCGTCG+CGG | - | chr5.4:31861841-31861860 | MS.gene53103:intron | 45.0% |
| ! | TGGTTATTGTGGAGTACCTC+AGG | - | chr5.4:31861699-31861718 | MS.gene53103:intron | 45.0% |
| !! | AGTGATGGGTATGATGCATC+TGG | - | chr5.4:31862720-31862739 | MS.gene53103:CDS | 45.0% |
| !! | CCACTAAGCTTTTTGCTGTC+TGG | + | chr5.4:31859204-31859223 | None:intergenic | 45.0% |
| !! | GGGCAATCCTGTGTTACTTT+AGG | + | chr5.4:31858266-31858285 | None:intergenic | 45.0% |
| !! | TCATATGTGCTGATTCCCTG+AGG | + | chr5.4:31861718-31861737 | None:intergenic | 45.0% |
| !! | TGAGGGGTATTAAGTTAGCC+GGG | + | chr5.4:31860400-31860419 | None:intergenic | 45.0% |
| !!! | CTGCTGTTTTCTCAAGAGGA+AGG | - | chr5.4:31860894-31860913 | MS.gene53103:CDS | 45.0% |
| ACAGCGTCTGTAAGTTCGCT+CGG | - | chr5.4:31862156-31862175 | MS.gene53103:intron | 50.0% | |
| ACCGCGACGGAAAGTAGAAA+AGG | + | chr5.4:31861845-31861864 | None:intergenic | 50.0% | |
| ACGCATGTTCGTGGATGATC+AGG | - | chr5.4:31861882-31861901 | MS.gene53103:intron | 50.0% | |
| AGAGAAACTGCTGCCCAACT+TGG | + | chr5.4:31860941-31860960 | None:intergenic | 50.0% | |
| ATACTGCTGAGGTGGCATAG+TGG | - | chr5.4:31860301-31860320 | MS.gene53103:intron | 50.0% | |
| ATCATCCACGAACATGCGTG+GGG | + | chr5.4:31861881-31861900 | None:intergenic | 50.0% | |
| CAAGTTGTGTCAAGCTTGGG+CGG | - | chr5.4:31862540-31862559 | MS.gene53103:intron | 50.0% | |
| CGATCAATGATTGACAGCGC+TGG | - | chr5.4:31858982-31859001 | MS.gene53103:intron | 50.0% | |
| CGGAAATTCCTTCAGAGTCG+CGG | + | chr5.4:31862685-31862704 | None:intergenic | 50.0% | |
| CGGCATTGTTGCATCTTCTC+CGG | - | chr5.4:31862560-31862579 | MS.gene53103:intron | 50.0% | |
| CTCACCTGAAGAGGGTGATA+AGG | + | chr5.4:31857215-31857234 | None:intergenic | 50.0% | |
| CTGTCGAGGTCAACTAGTGA+TGG | - | chr5.4:31862705-31862724 | MS.gene53103:CDS | 50.0% | |
| GACACAACAACGAGCCATTC+AGG | - | chr5.4:31862331-31862350 | MS.gene53103:intron | 50.0% | |
| GACTTGTCCTTGCTTCAAGC+TGG | + | chr5.4:31862521-31862540 | None:intergenic | 50.0% | |
| GAGCTAACAGGCGACATTTG+GGG | + | chr5.4:31861796-31861815 | None:intergenic | 50.0% | |
| GATCATCCACGAACATGCGT+GGG | + | chr5.4:31861882-31861901 | None:intergenic | 50.0% | |
| GATGGGTATGATGCATCTGG+TGG | - | chr5.4:31862723-31862742 | MS.gene53103:CDS | 50.0% | |
| GGAAATTCCTTCAGAGTCGC+GGG | + | chr5.4:31862684-31862703 | None:intergenic | 50.0% | |
| GGCACGGTTAAATGCAGAAG+AGG | - | chr5.4:31862251-31862270 | MS.gene53103:intron | 50.0% | |
| GTGGACGTATCCTCCAAGTT+GGG | - | chr5.4:31860925-31860944 | MS.gene53103:CDS | 50.0% | |
| TCACTAGTTGACCTCGACAG+CGG | + | chr5.4:31862705-31862724 | None:intergenic | 50.0% | |
| TGAAGGAATTTCCGCTGTCG+AGG | - | chr5.4:31862691-31862710 | MS.gene53103:CDS | 50.0% | |
| TGAGTGGCTGGAATGACAGT+TGG | + | chr5.4:31858227-31858246 | None:intergenic | 50.0% | |
| TGATCATCCACGAACATGCG+TGG | + | chr5.4:31861883-31861902 | None:intergenic | 50.0% | |
| TGGGTATGATGCATCTGGTG+GGG | - | chr5.4:31862725-31862744 | MS.gene53103:CDS | 50.0% | |
| TGTGGACGTATCCTCCAAGT+TGG | - | chr5.4:31860924-31860943 | MS.gene53103:CDS | 50.0% | |
| TTAGTCCGTGGACATTGGCA+CGG | - | chr5.4:31862235-31862254 | MS.gene53103:intron | 50.0% | |
| ! | GATCACAACTCTGGAAGCAG+TGG | - | chr5.4:31862363-31862382 | MS.gene53103:intron | 50.0% |
| !! | CATCATAGCTTTGAGGGAGC+AGG | - | chr5.4:31861741-31861760 | MS.gene53103:intron | 50.0% |
| !! | CTTACAGACGCTGTTTCTGG+TGG | + | chr5.4:31862150-31862169 | None:intergenic | 50.0% |
| !! | CTTGCCTGCTGACTTACCTA+TGG | - | chr5.4:31862425-31862444 | MS.gene53103:intron | 50.0% |
| !! | GAGGGGTATTAAGTTAGCCG+GGG | + | chr5.4:31860399-31860418 | None:intergenic | 50.0% |
| ACAGTGACAGGGTTCCTACG+AGG | - | chr5.4:31862751-31862770 | MS.gene53103:intron | 55.0% | |
| AGCTGATCCTGCAGATCCAG+GGG | - | chr5.4:31859149-31859168 | MS.gene53103:CDS | 55.0% | |
| ATCCGTTTACCTGGCCTCCT+AGG | + | chr5.4:31862402-31862421 | None:intergenic | 55.0% | |
| CAGCTGATCCTGCAGATCCA+GGG | - | chr5.4:31859148-31859167 | MS.gene53103:CDS | 55.0% | |
| CAGGATCAGCAAGGAGTTGG+AGG | - | chr5.4:31861760-31861779 | MS.gene53103:intron | 55.0% | |
| CCTCTCTCCAGCTTGAAGCA+AGG | - | chr5.4:31862511-31862530 | MS.gene53103:intron | 55.0% | |
| CCTTGCTTCAAGCTGGAGAG+AGG | + | chr5.4:31862514-31862533 | None:intergenic | 55.0% | |
| CGGAAGGCGAATCCACAAGA+CGG | - | chr5.4:31862631-31862650 | MS.gene53103:intron | 55.0% | |
| CTACTTTCCGTCGCGGTCAA+TGG | - | chr5.4:31861848-31861867 | MS.gene53103:intron | 55.0% | |
| GAAACTGCTGCCCAACTTGG+AGG | + | chr5.4:31860938-31860957 | None:intergenic | 55.0% | |
| GAGCAGGATCAGCAAGGAGT+TGG | - | chr5.4:31861757-31861776 | MS.gene53103:intron | 55.0% | |
| GCTGCAGGTCTTTCTGTTGC+TGG | - | chr5.4:31862657-31862676 | MS.gene53103:CDS | 55.0% | |
| GGAAGGCGAATCCACAAGAC+GGG | - | chr5.4:31862632-31862651 | MS.gene53103:intron | 55.0% | |
| GGCAAGCGAATCCGTTTACC+TGG | + | chr5.4:31862411-31862430 | None:intergenic | 55.0% | |
| GGTGACCAAAAGCGGTTCTC+AGG | - | chr5.4:31860525-31860544 | MS.gene53103:intron | 55.0% | |
| GTCAGGTGTCTGACACGTGT+CGG | - | chr5.4:31861536-31861555 | MS.gene53103:intron | 55.0% | |
| GTTGGGCAGCAGTTTCTCTC+TGG | - | chr5.4:31860942-31860961 | MS.gene53103:CDS | 55.0% | |
| TCATCCACGAACATGCGTGG+GGG | + | chr5.4:31861880-31861899 | None:intergenic | 55.0% | |
| TCCGTTTACCTGGCCTCCTA+GGG | + | chr5.4:31862401-31862420 | None:intergenic | 55.0% | |
| TGGAAGCAGTGGACGACGAA+TGG | - | chr5.4:31862374-31862393 | MS.gene53103:intron | 55.0% | |
| TGGTGGGGAAGACAGTGACA+GGG | - | chr5.4:31862740-31862759 | MS.gene53103:CDS | 55.0% | |
| TTGAGGGAGCAGGATCAGCA+AGG | - | chr5.4:31861751-31861770 | MS.gene53103:intron | 55.0% | |
| ACCTGCAGCAACCCGTCTTG+TGG | + | chr5.4:31862646-31862665 | None:intergenic | 60.0% | |
| CCCCTAGGAGGCCAGGTAAA+CGG | - | chr5.4:31862397-31862416 | MS.gene53103:intron | 60.0% | |
| CCGTTTACCTGGCCTCCTAG+GGG | + | chr5.4:31862400-31862419 | None:intergenic | 60.0% | |
| CTGGTGGGGAAGACAGTGAC+AGG | - | chr5.4:31862739-31862758 | MS.gene53103:CDS | 60.0% | |
| CTTGTGGATTCGCCTTCCGC+CGG | + | chr5.4:31862630-31862649 | None:intergenic | 60.0% | |
| GCAGCTGATCCTGCAGATCC+AGG | - | chr5.4:31859147-31859166 | MS.gene53103:CDS | 60.0% | |
| GTGTGCACCATTGACCGCGA+CGG | + | chr5.4:31861858-31861877 | None:intergenic | 60.0% | |
| ! | CCACCCCTTTTGTGTGCCTC+CGG | - | chr5.4:31862608-31862627 | MS.gene53103:intron | 60.0% |
| ! | CCTCTTTGACTGAGGTGCCC+CGG | - | chr5.4:31860379-31860398 | MS.gene53103:intron | 60.0% |
| ! | TCCGCCGGAGGCACACAAAA+GGG | + | chr5.4:31862615-31862634 | None:intergenic | 60.0% |
| ! | TTCCGCCGGAGGCACACAAA+AGG | + | chr5.4:31862616-31862635 | None:intergenic | 60.0% |
| ! | TTTTGTGTGCCTCCGGCGGA+AGG | - | chr5.4:31862615-31862634 | MS.gene53103:intron | 60.0% |
| !! | CACGTGTCGGTGTTGCACAC+CGG | - | chr5.4:31861549-31861568 | MS.gene53103:intron | 60.0% |
| !! | TCCACAAGACGGGTTGCTGC+AGG | - | chr5.4:31862642-31862661 | MS.gene53103:intron | 60.0% |
| CACACCCCCACGCATGTTCG+TGG | - | chr5.4:31861873-31861892 | MS.gene53103:intron | 65.0% | |
| GACGACGAATGGCCCCTAGG+AGG | - | chr5.4:31862385-31862404 | MS.gene53103:intron | 65.0% | |
| GTGGACGACGAATGGCCCCT+AGG | - | chr5.4:31862382-31862401 | MS.gene53103:intron | 65.0% | |
| TGCTGGTCCCGCGACTCTGA+AGG | - | chr5.4:31862674-31862693 | MS.gene53103:CDS | 65.0% | |
| ! | CCCCTTTTGTGTGCCTCCGG+CGG | - | chr5.4:31862611-31862630 | MS.gene53103:intron | 65.0% |
| ! | CCGCCGGAGGCACACAAAAG+GGG | + | chr5.4:31862614-31862633 | None:intergenic | 65.0% |
| ! | CCGGAGGCACACAAAAGGGG+TGG | + | chr5.4:31862611-31862630 | None:intergenic | 65.0% |
| ! | CCGGGGCACCTCAGTCAAAG+AGG | + | chr5.4:31860382-31860401 | None:intergenic | 65.0% |
| CGAATGGCCCCTAGGAGGCC+AGG | - | chr5.4:31862390-31862409 | MS.gene53103:intron | 70.0% | |
| GTGGATTCGCCTTCCGCCGG+AGG | + | chr5.4:31862627-31862646 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 31857188 | 31862893 | 31857188 | ID=MS.gene53103 |
| chr5.4 | mRNA | 31857188 | 31862893 | 31857188 | ID=MS.gene53103.t1;Parent=MS.gene53103 |
| chr5.4 | exon | 31862852 | 31862893 | 31862852 | ID=MS.gene53103.t1.exon1;Parent=MS.gene53103.t1 |
| chr5.4 | CDS | 31862852 | 31862893 | 31862852 | ID=cds.MS.gene53103.t1;Parent=MS.gene53103.t1 |
| chr5.4 | exon | 31862649 | 31862762 | 31862649 | ID=MS.gene53103.t1.exon2;Parent=MS.gene53103.t1 |
| chr5.4 | CDS | 31862649 | 31862762 | 31862649 | ID=cds.MS.gene53103.t1;Parent=MS.gene53103.t1 |
| chr5.4 | exon | 31860566 | 31860970 | 31860566 | ID=MS.gene53103.t1.exon3;Parent=MS.gene53103.t1 |
| chr5.4 | CDS | 31860566 | 31860970 | 31860566 | ID=cds.MS.gene53103.t1;Parent=MS.gene53103.t1 |
| chr5.4 | exon | 31860329 | 31860397 | 31860329 | ID=MS.gene53103.t1.exon4;Parent=MS.gene53103.t1 |
| chr5.4 | CDS | 31860329 | 31860397 | 31860329 | ID=cds.MS.gene53103.t1;Parent=MS.gene53103.t1 |
| chr5.4 | exon | 31860167 | 31860238 | 31860167 | ID=MS.gene53103.t1.exon5;Parent=MS.gene53103.t1 |
| chr5.4 | CDS | 31860167 | 31860238 | 31860167 | ID=cds.MS.gene53103.t1;Parent=MS.gene53103.t1 |
| chr5.4 | exon | 31859097 | 31859225 | 31859097 | ID=MS.gene53103.t1.exon6;Parent=MS.gene53103.t1 |
| chr5.4 | CDS | 31859097 | 31859225 | 31859097 | ID=cds.MS.gene53103.t1;Parent=MS.gene53103.t1 |
| chr5.4 | exon | 31858879 | 31858959 | 31858879 | ID=MS.gene53103.t1.exon7;Parent=MS.gene53103.t1 |
| chr5.4 | CDS | 31858879 | 31858959 | 31858879 | ID=cds.MS.gene53103.t1;Parent=MS.gene53103.t1 |
| chr5.4 | exon | 31858178 | 31858360 | 31858178 | ID=MS.gene53103.t1.exon8;Parent=MS.gene53103.t1 |
| chr5.4 | CDS | 31858178 | 31858360 | 31858178 | ID=cds.MS.gene53103.t1;Parent=MS.gene53103.t1 |
| chr5.4 | exon | 31857188 | 31857946 | 31857188 | ID=MS.gene53103.t1.exon9;Parent=MS.gene53103.t1 |
| chr5.4 | CDS | 31857188 | 31857946 | 31857188 | ID=cds.MS.gene53103.t1;Parent=MS.gene53103.t1 |
| Gene Sequence |
| Protein sequence |
