Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53694.t1 | XP_013467232.1 | 95.5 | 67 | 3 | 0 | 1 | 67 | 1 | 67 | 1.20E-25 | 127.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53694.t1 | G8A2F4 | 95.5 | 67 | 3 | 0 | 1 | 67 | 1 | 67 | 8.7e-26 | 127.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050584 | MS.gene53694 | 0.845373 | 4.23E-59 | -1.69E-46 |
| MS.gene050585 | MS.gene53694 | 0.837029 | 6.61E-57 | -1.69E-46 |
| MS.gene050587 | MS.gene53694 | 0.87363 | 1.27E-67 | -1.69E-46 |
| MS.gene052142 | MS.gene53694 | 0.828183 | 1.04E-54 | -1.69E-46 |
| MS.gene053383 | MS.gene53694 | 0.818525 | 1.87E-52 | -1.69E-46 |
| MS.gene05456 | MS.gene53694 | 0.859666 | 3.53E-63 | -1.69E-46 |
| MS.gene059768 | MS.gene53694 | 0.803653 | 3.15E-49 | -1.69E-46 |
| MS.gene060691 | MS.gene53694 | 0.805103 | 1.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 226 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGTGGGGTTGGAGTTCT+TGG | 0.129183 | 1.3:+29449434 | MS.gene53694:CDS |
| GGTGGTGTTGGTGGATTTGC+AGG | 0.176885 | 1.3:+29448960 | MS.gene53694:CDS |
| TTAGGTGGGGTTGGTGGTTT+GGG | 0.184657 | 1.3:+29449497 | MS.gene53694:CDS |
| GCTGGAGGAGTGGGAGGTTT+GGG | 0.202878 | 1.3:+29449524 | MS.gene53694:CDS |
| TTTAGGTGGGGTTGGTGGTT+TGG | 0.203122 | 1.3:+29449496 | MS.gene53694:CDS |
| GGATTTGCAGGTGGCTTTGC+TGG | 0.204412 | 1.3:+29448972 | MS.gene53694:CDS |
| GGTGGGGTTGGTGGTGGTAT+TGG | 0.207458 | 1.3:+29448999 | MS.gene53694:CDS |
| GGTGGTGGTGGTGGAGGTTT+AGG | 0.223281 | 1.3:+29449602 | MS.gene53694:CDS |
| GGCTGGAGGAGTGGGAGGTT+TGG | 0.227487 | 1.3:+29449523 | MS.gene53694:CDS |
| GTGGGGTTGGTGGTGGTATT+GGG | 0.249095 | 1.3:+29449000 | MS.gene53694:CDS |
| GCAGCTGGAGTTGGTGGGCT+TGG | 0.252292 | 1.3:+29449377 | MS.gene53694:CDS |
| GTTGGTGGTTTGGGTGGGGC+TGG | 0.254762 | 1.3:+29449506 | MS.gene53694:CDS |
| TTTGGGTGGGGCTGGAGGAG+TGG | 0.256810 | 1.3:+29449514 | MS.gene53694:CDS |
| GGTAGTGGGGTTGGAGGCTT+GGG | 0.258571 | 1.3:+29449629 | MS.gene53694:CDS |
| TGGTAGTGGGGTTGGAGGCT+TGG | 0.259684 | 1.3:+29449628 | MS.gene53694:CDS |
| TAGGAAAGTTTGGTGGGATT+GGG | 0.263582 | 1.3:+29449144 | MS.gene53694:CDS |
| GCTGGGATTGGTGGGGTTGG+TGG | 0.263999 | 1.3:+29448990 | MS.gene53694:CDS |
| GGAGGTTTAGGTGGTGGTAG+TGG | 0.265335 | 1.3:+29449614 | MS.gene53694:CDS |
| ATTGGGAAGGTTGGTGGAAT+TGG | 0.267218 | 1.3:+29449017 | MS.gene53694:CDS |
| AGGTGGTGGAAGTGGTGGTT+TGG | 0.267847 | 1.3:+29449730 | MS.gene53694:CDS |
| GGCTTCCATGGGATTGGTGG+TGG | 0.269672 | 1.3:+29449419 | MS.gene53694:CDS |
| CTTGGTGGTGCAGCTGGAAT+TGG | 0.283128 | 1.3:+29449395 | MS.gene53694:CDS |
| ATTGGGAAGGTTGGTGGAAT+TGG | 0.285495 | 1.3:+29449059 | MS.gene53694:CDS |
| TTGGAGGGTTAGGCGGTGTT+GGG | 0.287484 | 1.3:+29449471 | MS.gene53694:CDS |
| GGTGGTTTGGGTGGGGCTGG+AGG | 0.288664 | 1.3:+29449509 | MS.gene53694:CDS |
| TCATGGCCACCTTCTCCATT+TGG | 0.289239 | 1.3:-29448846 | None:intergenic |
| GTGGGAGGTTTGGGTGGAGC+AGG | 0.301955 | 1.3:+29449533 | MS.gene53694:CDS |
| GGTGGCATTGGAGGTGGAAT+TGG | 0.302529 | 1.3:+29449041 | MS.gene53694:CDS |
| GGTGGTGGAGCTGGAATTAT+TGG | 0.306918 | 1.3:+29449296 | MS.gene53694:CDS |
| GGTGGTGGAAGTGGTGGTTT+GGG | 0.307838 | 1.3:+29449731 | MS.gene53694:CDS |
| GAGGTTTAGGTGGTGGTAGT+GGG | 0.308037 | 1.3:+29449615 | MS.gene53694:CDS |
| GGTGGCATTGGAGGTGGAAT+TGG | 0.311822 | 1.3:+29449083 | MS.gene53694:CDS |
| GGTGGGGCTGGAGGAGTGGG+AGG | 0.311905 | 1.3:+29449518 | MS.gene53694:CDS |
| GTGGGGTTGGTGGTTTGGGT+GGG | 0.312334 | 1.3:+29449501 | MS.gene53694:CDS |
| GGTGGTGGTATTGGGAAGTT+TGG | 0.312497 | 1.3:+29449200 | MS.gene53694:CDS |
| GGTGGCCTTGGTGGTGGTGC+TGG | 0.313519 | 1.3:+29449251 | MS.gene53694:CDS |
| GCCGGTGGTGCCGGAGGCTT+AGG | 0.314575 | 1.3:+29449710 | MS.gene53694:CDS |
| TTGGGTGGGGCTGGAGGAGT+GGG | 0.319480 | 1.3:+29449515 | MS.gene53694:CDS |
| GGTGGGGTTGGTGGTTTGGG+TGG | 0.319860 | 1.3:+29449500 | MS.gene53694:CDS |
| TGGGGTTGGTGGTTTGGGTG+GGG | 0.324739 | 1.3:+29449502 | MS.gene53694:CDS |
| GGTGGAATTGGTGGTGGCAT+TGG | 0.324844 | 1.3:+29449029 | MS.gene53694:CDS |
| GGTGGAATTGGTGGTGGCAT+TGG | 0.324844 | 1.3:+29449071 | MS.gene53694:CDS |
| GTGGGTGGGGCCGGTGGTGC+CGG | 0.330516 | 1.3:+29449701 | MS.gene53694:CDS |
| GGGATTGGTGGGGTTGGTGG+TGG | 0.331712 | 1.3:+29448993 | MS.gene53694:CDS |
| GCTTCCATGGGATTGGTGGT+GGG | 0.337075 | 1.3:+29449420 | MS.gene53694:CDS |
| GCAGGTGGCTTTGCTGGGAT+TGG | 0.337143 | 1.3:+29448978 | MS.gene53694:CDS |
| GGCGGCTTGGGTGGTGGTGG+TGG | 0.339019 | 1.3:+29449593 | MS.gene53694:CDS |
| CATGGTATTGGTGGTGGTAT+TGG | 0.339569 | 1.3:+29449191 | MS.gene53694:CDS |
| TGGAGGGTTAGGCGGTGTTG+GGG | 0.340507 | 1.3:+29449472 | MS.gene53694:CDS |
| GGTGGTGGTGTTGGCGGCTT+GGG | 0.342027 | 1.3:+29449581 | MS.gene53694:CDS |
| TTTGCTGGGATTGGTGGGGT+TGG | 0.343646 | 1.3:+29448987 | MS.gene53694:CDS |
| CGGTGGTGGTGTTGGCGGCT+TGG | 0.343648 | 1.3:+29449580 | MS.gene53694:CDS |
| CATGGGATTGGTGGTGGGGT+TGG | 0.346244 | 1.3:+29449425 | MS.gene53694:CDS |
| GTGGCTTTGCTGGGATTGGT+GGG | 0.347829 | 1.3:+29448982 | MS.gene53694:CDS |
| GGTGTTGGCGGCTTGGGTGG+TGG | 0.348729 | 1.3:+29449587 | MS.gene53694:CDS |
| TTAGGTGGTGGTAGTGGGGT+TGG | 0.352728 | 1.3:+29449620 | MS.gene53694:CDS |
| GCCGGAGGAGTTGGAGGCTT+GGG | 0.353377 | 1.3:+29449656 | MS.gene53694:CDS |
| GGTTTGGGTGGTGGTACTAC+TGG | 0.353555 | 1.3:+29449746 | MS.gene53694:CDS |
| GGGATTGGTGGTGGGATAGG+TGG | 0.359347 | 1.3:+29449116 | MS.gene53694:CDS |
| GGCTTGGGTGGTGGTGGTGG+AGG | 0.360489 | 1.3:+29449596 | MS.gene53694:CDS |
| GGAAGTGGTGGTTTGGGTGG+TGG | 0.360517 | 1.3:+29449737 | MS.gene53694:CDS |
| GGTGGGCTTGGTGGTGCAGC+TGG | 0.361747 | 1.3:+29449389 | MS.gene53694:CDS |
| ATTGGGAAGTTTGGTGGGAT+AGG | 0.363099 | 1.3:+29449209 | MS.gene53694:CDS |
| ATAGGAAAGTTTGGTGGGAT+TGG | 0.368310 | 1.3:+29449143 | MS.gene53694:CDS |
| CTTGGTGGTGGTGCTGGAAT+CGG | 0.369713 | 1.3:+29449257 | MS.gene53694:CDS |
| ATTGGAGGGTTAGGCGGTGT+TGG | 0.370472 | 1.3:+29449470 | MS.gene53694:CDS |
| GTGGCATTGGAGGTGGAATT+GGG | 0.370510 | 1.3:+29449042 | MS.gene53694:CDS |
| GGTGGGATTGGTGGTGGGAT+AGG | 0.373397 | 1.3:+29449113 | MS.gene53694:CDS |
| TGCCGGAGGAGTTGGAGGCT+TGG | 0.373711 | 1.3:+29449655 | MS.gene53694:CDS |
| ATGGTATTGGTGGTGGTATT+GGG | 0.375750 | 1.3:+29449192 | MS.gene53694:CDS |
| GGAGGAGTTGGAGGTGTGGG+TGG | 0.375769 | 1.3:+29449686 | MS.gene53694:CDS |
| CTTGGTGGTCACCATGGAAT+TGG | 0.376342 | 1.3:+29449452 | MS.gene53694:CDS |
| GGTGGCTTTGCTGGGATTGG+TGG | 0.377697 | 1.3:+29448981 | MS.gene53694:CDS |
| CATGGGATTGGTGGTGGAGC+TGG | 0.380407 | 1.3:+29449287 | MS.gene53694:CDS |
| GGAATTGGTGGTGGCATTGG+AGG | 0.382098 | 1.3:+29449032 | MS.gene53694:CDS |
| GGAATTGGTGGTGGCATTGG+AGG | 0.382098 | 1.3:+29449074 | MS.gene53694:CDS |
| GGCTTAGGTGGCGCCGGTGG+TGG | 0.382350 | 1.3:+29449566 | MS.gene53694:CDS |
| TTCTTGGTTGGTGGTGTTGG+TGG | 0.385548 | 1.3:+29448951 | MS.gene53694:CDS |
| GGGAAGGTTGGTGGAATTGG+TGG | 0.386069 | 1.3:+29449020 | MS.gene53694:CDS |
| GGTGGTGGTATTGGGAAGGT+TGG | 0.388209 | 1.3:+29449008 | MS.gene53694:CDS |
| GGTGGGATAGGTGGTGGAAT+AGG | 0.390049 | 1.3:+29449221 | MS.gene53694:CDS |
| GATTTGCAGGTGGCTTTGCT+GGG | 0.391049 | 1.3:+29448973 | MS.gene53694:CDS |
| GGTGGTGGTAGTGGGGTTGG+AGG | 0.391544 | 1.3:+29449623 | MS.gene53694:CDS |
| ATAGGAAAGTTTGGTGGCCT+TGG | 0.394229 | 1.3:+29449239 | MS.gene53694:CDS |
| GGTGGTGGAATAGGAAAGTT+TGG | 0.395891 | 1.3:+29449134 | MS.gene53694:CDS |
| GGTGGTGGAATAGGAAAGTT+TGG | 0.395891 | 1.3:+29449230 | MS.gene53694:CDS |
| TGATGACAAGAAGAATTTCT+TGG | 0.396964 | 1.3:+29448935 | MS.gene53694:CDS |
| GTTGGAGGTGTGGGTGGGGC+CGG | 0.399161 | 1.3:+29449692 | MS.gene53694:CDS |
| ATTGGAAAACTTGGTGGGAT+TGG | 0.400061 | 1.3:+29449101 | MS.gene53694:CDS |
| GGAGGTGTGGGTGGGGCCGG+TGG | 0.400449 | 1.3:+29449695 | MS.gene53694:CDS |
| GGTGGGATAGGTGGTGGAAT+AGG | 0.401260 | 1.3:+29449125 | MS.gene53694:CDS |
| GTTGGCGGCTTGGGTGGTGG+TGG | 0.405952 | 1.3:+29449590 | MS.gene53694:CDS |
| AAACTTGGTGGGATTGGTGG+TGG | 0.406180 | 1.3:+29449107 | MS.gene53694:CDS |
| GCTGGTATCGGTGGCGTCCA+TGG | 0.406482 | 1.3:+29449344 | MS.gene53694:CDS |
| GTGGTATTGGGAAGTTTGGT+GGG | 0.407738 | 1.3:+29449204 | MS.gene53694:CDS |
| GTTGGAGGCTTGGGTGGTGC+CGG | 0.408092 | 1.3:+29449638 | MS.gene53694:CDS |
| AATTTCTTGGTTGGTGGTGT+TGG | 0.408561 | 1.3:+29448948 | MS.gene53694:CDS |
| GGTGGTATTGGGAAGGTTGG+TGG | 0.408880 | 1.3:+29449011 | MS.gene53694:CDS |
| GGTGGTGGTGGAGGTTTAGG+TGG | 0.410971 | 1.3:+29449605 | MS.gene53694:CDS |
| GGAGGAGTGGGAGGTTTGGG+TGG | 0.412789 | 1.3:+29449527 | MS.gene53694:CDS |
| GGGTGGTGGTACTACTGGTT+TGG | 0.413718 | 1.3:+29449751 | MS.gene53694:CDS |
| TTGGGTGGAGCAGGAGGAGT+AGG | 0.414097 | 1.3:+29449542 | MS.gene53694:CDS |
| AGGAAAGTTTGGTGGGATTG+GGG | 0.414624 | 1.3:+29449145 | MS.gene53694:CDS |
| CTTCCATGGGATTGGTGGTG+GGG | 0.414869 | 1.3:+29449421 | MS.gene53694:CDS |
| GGTGGTGCAGCTGGAGTTGG+TGG | 0.415448 | 1.3:+29449371 | MS.gene53694:CDS |
| ATTGGTGGCTTCCATGGGAT+TGG | 0.417384 | 1.3:+29449413 | MS.gene53694:CDS |
| ATTGGTGGTGGCATTGGAGG+TGG | 0.420008 | 1.3:+29449035 | MS.gene53694:CDS |
| ATTGGTGGTGGCATTGGAGG+TGG | 0.420008 | 1.3:+29449077 | MS.gene53694:CDS |
| GGTGGAAGTGGTGGTTTGGG+TGG | 0.420514 | 1.3:+29449734 | MS.gene53694:CDS |
| ATTGGTGGTTACCATGGTAT+TGG | 0.422329 | 1.3:+29449179 | MS.gene53694:CDS |
| GCAGGAGGAGTAGGAGGCTT+AGG | 0.424864 | 1.3:+29449551 | MS.gene53694:CDS |
| GGTGGGGCCGGTGGTGCCGG+AGG | 0.425610 | 1.3:+29449704 | MS.gene53694:CDS |
| CATGGCATTGTTGGTGGAGC+TGG | 0.428539 | 1.3:+29449326 | MS.gene53694:CDS |
| GCTGGAATCGGTGGCTTCCA+TGG | 0.430411 | 1.3:+29449269 | MS.gene53694:CDS |
| GGTGGTGCCGGAGGAGTTGG+AGG | 0.431071 | 1.3:+29449650 | MS.gene53694:CDS |
| ATAGGTGGTGCAGCTGGAGT+TGG | 0.431411 | 1.3:+29449368 | MS.gene53694:CDS |
| GGGAAGGTTGGTGGAATTGG+TGG | 0.432196 | 1.3:+29449062 | MS.gene53694:CDS |
| ATTGGTGGTGGGATAGGTGG+TGG | 0.435123 | 1.3:+29449119 | MS.gene53694:CDS |
| GCTGGAGTTGGTGGGCTTGG+TGG | 0.436385 | 1.3:+29449380 | MS.gene53694:CDS |
| GGTGGCTTCCATGGGATTGG+TGG | 0.437145 | 1.3:+29449416 | MS.gene53694:CDS |
| GGTGGTGTTGGCGGCTTGGG+TGG | 0.437466 | 1.3:+29449584 | MS.gene53694:CDS |
| TTGGGTGGTGCCGGAGGAGT+TGG | 0.438627 | 1.3:+29449647 | MS.gene53694:CDS |
| ACCTAAGCCTCCGGCACCAC+CGG | 0.440267 | 1.3:-29449711 | None:intergenic |
| GGCTTCCATGGGATTGGTGG+TGG | 0.440354 | 1.3:+29449281 | MS.gene53694:CDS |
| AAGTTTGGTGGCCTTGGTGG+TGG | 0.441407 | 1.3:+29449245 | MS.gene53694:CDS |
| AGTGGGGTTGGAGGCTTGGG+TGG | 0.441510 | 1.3:+29449632 | MS.gene53694:CDS |
| GGTGGTGCAGCTGGAATTGG+TGG | 0.444957 | 1.3:+29449398 | MS.gene53694:CDS |
| AGGAGTTGGAGGTGTGGGTG+GGG | 0.445304 | 1.3:+29449688 | MS.gene53694:CDS |
| GCTGGAATTGGTGGCTTCCA+TGG | 0.448077 | 1.3:+29449407 | MS.gene53694:CDS |
| GGAAAGTTTGGTGGGATTGG+GGG | 0.448186 | 1.3:+29449146 | MS.gene53694:CDS |
| GTTGGAGGCTTGGGTGGTAC+CGG | 0.449457 | 1.3:+29449665 | MS.gene53694:CDS |
| GGAGGTTTGGGTGGAGCAGG+AGG | 0.450166 | 1.3:+29449536 | MS.gene53694:CDS |
| TGCAGTAAGTTCAACTGGTA+AGG | 0.450318 | 1.3:+29448908 | MS.gene53694:CDS |
| GGAAAACTTGGTGGGATTGG+TGG | 0.450428 | 1.3:+29449104 | MS.gene53694:CDS |
| GGTGCTCACCATGGCATTGT+TGG | 0.451895 | 1.3:+29449317 | MS.gene53694:CDS |
| CAAGCCGCCAACACCACCAC+CGG | 0.452302 | 1.3:-29449579 | None:intergenic |
| GCACATGCAGTAAGTTCAAC+TGG | 0.457739 | 1.3:+29448903 | MS.gene53694:CDS |
| GGTGGCGCCGGTGGTGGTGT+TGG | 0.460977 | 1.3:+29449572 | MS.gene53694:CDS |
| GGGAAGTTTGGTGGGATAGG+TGG | 0.464501 | 1.3:+29449212 | MS.gene53694:CDS |
| ATCGGTGGCTTCCATGGGAT+TGG | 0.465079 | 1.3:+29449275 | MS.gene53694:CDS |
| GAGGAGTTGGAGGTGTGGGT+GGG | 0.467037 | 1.3:+29449687 | MS.gene53694:CDS |
| CTGGAATTGGTGGCTTCCAT+GGG | 0.467583 | 1.3:+29449408 | MS.gene53694:CDS |
| GGTGGTCACCATGGAATTGG+AGG | 0.470758 | 1.3:+29449455 | MS.gene53694:CDS |
| GGTGGAATTGGGAAGGTTGG+TGG | 0.472565 | 1.3:+29449053 | MS.gene53694:CDS |
| GGAGGTGGAATTGGGAAGGT+TGG | 0.474913 | 1.3:+29449050 | MS.gene53694:CDS |
| GGTGCCGGAGGCTTAGGTGG+TGG | 0.475394 | 1.3:+29449716 | MS.gene53694:CDS |
| ACCGGAGGAGTTGGAGGTGT+GGG | 0.477697 | 1.3:+29449683 | MS.gene53694:CDS |
| GGTGGTATTGGGAAGTTTGG+TGG | 0.479796 | 1.3:+29449203 | MS.gene53694:CDS |
| GGAGGGTTAGGCGGTGTTGG+GGG | 0.482961 | 1.3:+29449473 | MS.gene53694:CDS |
| AAGGTTGGTGGAATTGGTGG+TGG | 0.484418 | 1.3:+29449023 | MS.gene53694:CDS |
| AAGGTTGGTGGAATTGGTGG+TGG | 0.484418 | 1.3:+29449065 | MS.gene53694:CDS |
| GGTGGGGTTGGAGTTCTTGG+TGG | 0.488242 | 1.3:+29449437 | MS.gene53694:CDS |
| AGGTTTAGGTGGTGGTAGTG+GGG | 0.488964 | 1.3:+29449616 | MS.gene53694:CDS |
| GGTGGTTACCATGGTATTGG+TGG | 0.489244 | 1.3:+29449182 | MS.gene53694:CDS |
| AACTTGGTGGGATTGGTGGT+GGG | 0.490196 | 1.3:+29449108 | MS.gene53694:CDS |
| GGAAAGTTTGGTGGCCTTGG+TGG | 0.490323 | 1.3:+29449242 | MS.gene53694:CDS |
| GGAGGTGGAATTGGAAAACT+TGG | 0.492669 | 1.3:+29449092 | MS.gene53694:CDS |
| GGTGGAGCAGGAGGAGTAGG+AGG | 0.493447 | 1.3:+29449545 | MS.gene53694:CDS |
| AGGTGGCCATGAAGAAAAGA+TGG | 0.495712 | 1.3:+29448857 | MS.gene53694:CDS |
| GGCGCCGGTGGTGGTGTTGG+CGG | 0.495889 | 1.3:+29449575 | MS.gene53694:CDS |
| CACCATGGAATTGGAGGGTT+AGG | 0.495922 | 1.3:+29449461 | MS.gene53694:CDS |
| AAAGGTAAGTAAGATGGAAA+AGG | 0.495969 | 1.3:+29448761 | None:intergenic |
| ATTGTTGGTGGAGCTGGTAT+CGG | 0.496731 | 1.3:+29449332 | MS.gene53694:CDS |
| GGTGGTACCGGAGGAGTTGG+AGG | 0.499396 | 1.3:+29449677 | MS.gene53694:CDS |
| TTGGGTGGTACCGGAGGAGT+TGG | 0.500351 | 1.3:+29449674 | MS.gene53694:CDS |
| GGTTGGTGGTGGTATTGGGA+AGG | 0.500744 | 1.3:+29449004 | MS.gene53694:CDS |
| CTGGTATCGGTGGCGTCCAT+GGG | 0.504159 | 1.3:+29449345 | MS.gene53694:CDS |
| CATGGGATAGGTGGTGCAGC+TGG | 0.506817 | 1.3:+29449362 | MS.gene53694:CDS |
| GGAGGCTTAGGTGGTGGAAG+TGG | 0.507347 | 1.3:+29449722 | MS.gene53694:CDS |
| CTGGAATCGGTGGCTTCCAT+GGG | 0.510480 | 1.3:+29449270 | MS.gene53694:CDS |
| GGCTTAGGTGGTGGAAGTGG+TGG | 0.512828 | 1.3:+29449725 | MS.gene53694:CDS |
| ATCGGTGGCGTCCATGGGAT+AGG | 0.513088 | 1.3:+29449350 | MS.gene53694:CDS |
| ACCCACACCTCCAACTCCTC+CGG | 0.514740 | 1.3:-29449684 | None:intergenic |
| GGAGGCTTGGGTGGTGCCGG+AGG | 0.515019 | 1.3:+29449641 | MS.gene53694:CDS |
| GGTGGCTTCCATGGGATTGG+TGG | 0.515447 | 1.3:+29449278 | MS.gene53694:CDS |
| GGTTACCATGGTATTGGTGG+TGG | 0.517718 | 1.3:+29449185 | MS.gene53694:CDS |
| GGTACTACTGGTTTGGATTG+CGG | 0.519624 | 1.3:+29449758 | MS.gene53694:CDS |
| GCAGCACGTACCATTCCAAA+TGG | 0.523273 | 1.3:+29448831 | MS.gene53694:CDS |
| ACCCAAGCCTCCAACTCCTC+CGG | 0.532920 | 1.3:-29449657 | None:intergenic |
| GTAGGAGGCTTAGGTGGCGC+CGG | 0.536757 | 1.3:+29449560 | MS.gene53694:CDS |
| GGTGGTGGAGGTTTAGGTGG+TGG | 0.538799 | 1.3:+29449608 | MS.gene53694:CDS |
| GGTGTTGGTGGATTTGCAGG+TGG | 0.541249 | 1.3:+29448963 | MS.gene53694:CDS |
| TGGCTTTGCTGGGATTGGTG+GGG | 0.541879 | 1.3:+29448983 | MS.gene53694:CDS |
| TACCGGAGGAGTTGGAGGTG+TGG | 0.543422 | 1.3:+29449682 | MS.gene53694:CDS |
| GCTCACCATGGCATTGTTGG+TGG | 0.545728 | 1.3:+29449320 | MS.gene53694:CDS |
| AAGTTTGGTGGGATAGGTGG+TGG | 0.548027 | 1.3:+29449215 | MS.gene53694:CDS |
| GGAGTTCTTGGTGGTCACCA+TGG | 0.551210 | 1.3:+29449446 | MS.gene53694:CDS |
| GACAAGAAGAATTTCTTGGT+TGG | 0.551568 | 1.3:+29448939 | MS.gene53694:CDS |
| GCCACCTTCTCCATTTGGAA+TGG | 0.552894 | 1.3:-29448841 | None:intergenic |
| ACTTCCACCACCTAAGCCTC+CGG | 0.553303 | 1.3:-29449720 | None:intergenic |
| GGAGGAGTTGGAGGCTTGGG+TGG | 0.560126 | 1.3:+29449659 | MS.gene53694:CDS |
| CGCCTAACCCTCCAATTCCA+TGG | 0.563759 | 1.3:-29449463 | None:intergenic |
| CATTGGAGGTGGAATTGGGA+AGG | 0.567127 | 1.3:+29449046 | MS.gene53694:CDS |
| GGAGGCTTAGGTGGCGCCGG+TGG | 0.569120 | 1.3:+29449563 | MS.gene53694:CDS |
| GGAGGCTTGGGTGGTACCGG+AGG | 0.569244 | 1.3:+29449668 | MS.gene53694:CDS |
| GGTGGTGGTGCTGGAATCGG+TGG | 0.569897 | 1.3:+29449260 | MS.gene53694:CDS |
| AAGAAGAATTTCTTGGTTGG+TGG | 0.570148 | 1.3:+29448942 | MS.gene53694:CDS |
| CAACCCCACCACCAATCCCA+TGG | 0.574869 | 1.3:-29449424 | None:intergenic |
| GGTGGAATTGGAAAACTTGG+TGG | 0.579758 | 1.3:+29449095 | MS.gene53694:CDS |
| CAGCTCCACCACCAATCCCA+TGG | 0.580722 | 1.3:-29449286 | None:intergenic |
| GTTGAACTTACTGCATGTGC+TGG | 0.581369 | 1.3:-29448900 | None:intergenic |
| GTGGTGCAGCTGGAGTTGGT+GGG | 0.585613 | 1.3:+29449372 | MS.gene53694:CDS |
| GTGGAATAGGAAAGTTTGGT+GGG | 0.588570 | 1.3:+29449138 | MS.gene53694:CDS |
| GCAGTAAGTTCAACTGGTAA+GGG | 0.589337 | 1.3:+29448909 | MS.gene53694:CDS |
| GTGGAATTGGAAAACTTGGT+GGG | 0.591343 | 1.3:+29449096 | MS.gene53694:CDS |
| GTGGTCACCATGGAATTGGA+GGG | 0.592772 | 1.3:+29449456 | MS.gene53694:CDS |
| CATGGAATTGGAGGGTTAGG+CGG | 0.593063 | 1.3:+29449464 | MS.gene53694:CDS |
| GGTGGTGCCGGAGGCTTAGG+TGG | 0.593234 | 1.3:+29449713 | MS.gene53694:CDS |
| GGAGGAGTAGGAGGCTTAGG+TGG | 0.594277 | 1.3:+29449554 | MS.gene53694:CDS |
| CAGCTGCACCACCTATCCCA+TGG | 0.604444 | 1.3:-29449361 | None:intergenic |
| GGAATTATTGGTGCTCACCA+TGG | 0.605537 | 1.3:+29449308 | MS.gene53694:CDS |
| CGTACCATTCCAAATGGAGA+AGG | 0.611129 | 1.3:+29448837 | MS.gene53694:CDS |
| GGTGGCGTCCATGGGATAGG+TGG | 0.614620 | 1.3:+29449353 | MS.gene53694:CDS |
| ACCATTCCAAATGGAGAAGG+TGG | 0.617074 | 1.3:+29448840 | MS.gene53694:CDS |
| ATTAGATATAATCAAGGACA+AGG | 0.617310 | 1.3:-29449791 | None:intergenic |
| GATATAATCAAGGACAAGGG+TGG | 0.634913 | 1.3:-29449787 | None:intergenic |
| GGTGGAATAGGAAAGTTTGG+TGG | 0.636376 | 1.3:+29449137 | MS.gene53694:CDS |
| CAATACCACCACCAATACCA+TGG | 0.639486 | 1.3:-29449190 | None:intergenic |
| GGTGGCCATGAAGAAAAGAT+GGG | 0.642076 | 1.3:+29448858 | MS.gene53694:CDS |
| GCTGGAATTGGTGGTTACCA+TGG | 0.648141 | 1.3:+29449173 | MS.gene53694:CDS |
| CAGCTCCACCAACAATGCCA+TGG | 0.650639 | 1.3:-29449325 | None:intergenic |
| CGATTCCAGCACCACCACCA+AGG | 0.651177 | 1.3:-29449256 | None:intergenic |
| GTTGGTGGAGCTGGTATCGG+TGG | 0.654316 | 1.3:+29449335 | MS.gene53694:CDS |
| GGTGGAATAGGAAAGTTTGG+TGG | 0.669023 | 1.3:+29449233 | MS.gene53694:CDS |
| ACTACTGGTTTGGATTGCGG+TGG | 0.683232 | 1.3:+29449761 | MS.gene53694:CDS |
| TTAGATATAATCAAGGACAA+GGG | 0.687675 | 1.3:-29449790 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TGATGACAAGAAGAATTTCT+TGG | + | chr1.3:29448935-29448954 | MS.gene53694:CDS | 30.0% | |
| AAGAAGAATTTCTTGGTTGG+TGG | + | chr1.3:29448942-29448961 | MS.gene53694:CDS | 35.0% | |
| GACAAGAAGAATTTCTTGGT+TGG | + | chr1.3:29448939-29448958 | MS.gene53694:CDS | 35.0% | |
| GCAGTAAGTTCAACTGGTAA+GGG | + | chr1.3:29448909-29448928 | MS.gene53694:CDS | 40.0% | |
| GTGGAATAGGAAAGTTTGGT+GGG | + | chr1.3:29449138-29449157 | MS.gene53694:CDS | 40.0% | |
| GTGGAATTGGAAAACTTGGT+GGG | + | chr1.3:29449096-29449115 | MS.gene53694:CDS | 40.0% | |
| TGCAGTAAGTTCAACTGGTA+AGG | + | chr1.3:29448908-29448927 | MS.gene53694:CDS | 40.0% | |
| ! | ATAGGAAAGTTTGGTGGGAT+TGG | + | chr1.3:29449143-29449162 | MS.gene53694:CDS | 40.0% |
| ! | ATTGGAAAACTTGGTGGGAT+TGG | + | chr1.3:29449101-29449120 | MS.gene53694:CDS | 40.0% |
| ! | ATTGGTGGTTACCATGGTAT+TGG | + | chr1.3:29449179-29449198 | MS.gene53694:CDS | 40.0% |
| ! | TAGGAAAGTTTGGTGGGATT+GGG | + | chr1.3:29449144-29449163 | MS.gene53694:CDS | 40.0% |
| !! | AATTTCTTGGTTGGTGGTGT+TGG | + | chr1.3:29448948-29448967 | MS.gene53694:CDS | 40.0% |
| !! | ATGGTATTGGTGGTGGTATT+GGG | + | chr1.3:29449192-29449211 | MS.gene53694:CDS | 40.0% |
| ACCATTCCAAATGGAGAAGG+TGG | + | chr1.3:29448840-29448859 | MS.gene53694:CDS | 45.0% | |
| AGGTGGCCATGAAGAAAAGA+TGG | + | chr1.3:29448857-29448876 | MS.gene53694:CDS | 45.0% | |
| CAATACCACCACCAATACCA+TGG | - | chr1.3:29449193-29449212 | None:intergenic | 45.0% | |
| CGTACCATTCCAAATGGAGA+AGG | + | chr1.3:29448837-29448856 | MS.gene53694:CDS | 45.0% | |
| GCACATGCAGTAAGTTCAAC+TGG | + | chr1.3:29448903-29448922 | MS.gene53694:CDS | 45.0% | |
| GGAGGTGGAATTGGAAAACT+TGG | + | chr1.3:29449092-29449111 | MS.gene53694:CDS | 45.0% | |
| GGTGGAATAGGAAAGTTTGG+TGG | + | chr1.3:29449137-29449156 | MS.gene53694:CDS | 45.0% | |
| GGTGGAATTGGAAAACTTGG+TGG | + | chr1.3:29449095-29449114 | MS.gene53694:CDS | 45.0% | |
| GGTGGCCATGAAGAAAAGAT+GGG | + | chr1.3:29448858-29448877 | MS.gene53694:CDS | 45.0% | |
| GTTGAACTTACTGCATGTGC+TGG | - | chr1.3:29448903-29448922 | None:intergenic | 45.0% | |
| ! | AGGAAAGTTTGGTGGGATTG+GGG | + | chr1.3:29449145-29449164 | MS.gene53694:CDS | 45.0% |
| ! | ATAGGAAAGTTTGGTGGCCT+TGG | + | chr1.3:29449239-29449258 | MS.gene53694:CDS | 45.0% |
| ! | ATTGGGAAGTTTGGTGGGAT+AGG | + | chr1.3:29449209-29449228 | MS.gene53694:CDS | 45.0% |
| ! | ATTGTTGGTGGAGCTGGTAT+CGG | + | chr1.3:29449332-29449351 | MS.gene53694:CDS | 45.0% |
| ! | GCTCACCCATCTTTTCTTCA+TGG | - | chr1.3:29448866-29448885 | None:intergenic | 45.0% |
| ! | GGAATTATTGGTGCTCACCA+TGG | + | chr1.3:29449308-29449327 | MS.gene53694:CDS | 45.0% |
| ! | GTGGTATTGGGAAGTTTGGT+GGG | + | chr1.3:29449204-29449223 | MS.gene53694:CDS | 45.0% |
| !! | ATTGGGAAGGTTGGTGGAAT+TGG | + | chr1.3:29449017-29449036 | MS.gene53694:CDS | 45.0% |
| !! | CATGGTATTGGTGGTGGTAT+TGG | + | chr1.3:29449191-29449210 | MS.gene53694:CDS | 45.0% |
| !! | GGTACTACTGGTTTGGATTG+CGG | + | chr1.3:29449758-29449777 | MS.gene53694:CDS | 45.0% |
| !! | GGTGGTGGAATAGGAAAGTT+TGG | + | chr1.3:29449134-29449153 | MS.gene53694:CDS | 45.0% |
| CACCATGGAATTGGAGGGTT+AGG | + | chr1.3:29449461-29449480 | MS.gene53694:CDS | 50.0% | |
| CATGGAATTGGAGGGTTAGG+CGG | + | chr1.3:29449464-29449483 | MS.gene53694:CDS | 50.0% | |
| CATTGGAGGTGGAATTGGGA+AGG | + | chr1.3:29449046-29449065 | MS.gene53694:CDS | 50.0% | |
| GCAGCACGTACCATTCCAAA+TGG | + | chr1.3:29448831-29448850 | MS.gene53694:CDS | 50.0% | |
| GCCACCTTCTCCATTTGGAA+TGG | - | chr1.3:29448844-29448863 | None:intergenic | 50.0% | |
| GTGGTCACCATGGAATTGGA+GGG | + | chr1.3:29449456-29449475 | MS.gene53694:CDS | 50.0% | |
| TCATGGCCACCTTCTCCATT+TGG | - | chr1.3:29448849-29448868 | None:intergenic | 50.0% | |
| ! | AAACTTGGTGGGATTGGTGG+TGG | + | chr1.3:29449107-29449126 | MS.gene53694:CDS | 50.0% |
| ! | AACTTGGTGGGATTGGTGGT+GGG | + | chr1.3:29449108-29449127 | MS.gene53694:CDS | 50.0% |
| ! | AAGTTTGGTGGGATAGGTGG+TGG | + | chr1.3:29449215-29449234 | MS.gene53694:CDS | 50.0% |
| ! | AGGTTTAGGTGGTGGTAGTG+GGG | + | chr1.3:29449616-29449635 | MS.gene53694:CDS | 50.0% |
| ! | ATTGGTGGCTTCCATGGGAT+TGG | + | chr1.3:29449413-29449432 | MS.gene53694:CDS | 50.0% |
| ! | CTGGAATTGGTGGCTTCCAT+GGG | + | chr1.3:29449408-29449427 | MS.gene53694:CDS | 50.0% |
| ! | CTTGGTGGTCACCATGGAAT+TGG | + | chr1.3:29449452-29449471 | MS.gene53694:CDS | 50.0% |
| ! | GAGGTTTAGGTGGTGGTAGT+GGG | + | chr1.3:29449615-29449634 | MS.gene53694:CDS | 50.0% |
| ! | GATTTGCAGGTGGCTTTGCT+GGG | + | chr1.3:29448973-29448992 | MS.gene53694:CDS | 50.0% |
| ! | GCTGGAATTGGTGGTTACCA+TGG | + | chr1.3:29449173-29449192 | MS.gene53694:CDS | 50.0% |
| ! | GGAAAACTTGGTGGGATTGG+TGG | + | chr1.3:29449104-29449123 | MS.gene53694:CDS | 50.0% |
| ! | GGAAAGTTTGGTGGGATTGG+GGG | + | chr1.3:29449146-29449165 | MS.gene53694:CDS | 50.0% |
| ! | GGTGGTATTGGGAAGTTTGG+TGG | + | chr1.3:29449203-29449222 | MS.gene53694:CDS | 50.0% |
| ! | GGTGGTGGTATTGGGAAGTT+TGG | + | chr1.3:29449200-29449219 | MS.gene53694:CDS | 50.0% |
| ! | GGTGGTTACCATGGTATTGG+TGG | + | chr1.3:29449182-29449201 | MS.gene53694:CDS | 50.0% |
| ! | GTGGCATTGGAGGTGGAATT+GGG | + | chr1.3:29449042-29449061 | MS.gene53694:CDS | 50.0% |
| !! | AAGGTTGGTGGAATTGGTGG+TGG | + | chr1.3:29449023-29449042 | MS.gene53694:CDS | 50.0% |
| !! | ACTACTGGTTTGGATTGCGG+TGG | + | chr1.3:29449761-29449780 | MS.gene53694:CDS | 50.0% |
| !! | GGTGGTGGAGCTGGAATTAT+TGG | + | chr1.3:29449296-29449315 | MS.gene53694:CDS | 50.0% |
| !! | GGTTACCATGGTATTGGTGG+TGG | + | chr1.3:29449185-29449204 | MS.gene53694:CDS | 50.0% |
| !! | TTAGGTGGGGTTGGTGGTTT+GGG | + | chr1.3:29449497-29449516 | MS.gene53694:CDS | 50.0% |
| !! | TTCTTGGTTGGTGGTGTTGG+TGG | + | chr1.3:29448951-29448970 | MS.gene53694:CDS | 50.0% |
| !! | TTTAGGTGGGGTTGGTGGTT+TGG | + | chr1.3:29449496-29449515 | MS.gene53694:CDS | 50.0% |
| ACTTCCACCACCTAAGCCTC+CGG | - | chr1.3:29449723-29449742 | None:intergenic | 55.0% | |
| ATAGGTGGTGCAGCTGGAGT+TGG | + | chr1.3:29449368-29449387 | MS.gene53694:CDS | 55.0% | |
| ATCGGTGGCTTCCATGGGAT+TGG | + | chr1.3:29449275-29449294 | MS.gene53694:CDS | 55.0% | |
| ATTGGAGGGTTAGGCGGTGT+TGG | + | chr1.3:29449470-29449489 | MS.gene53694:CDS | 55.0% | |
| ATTGGGGGTGGAGCTGGAAT+TGG | + | chr1.3:29449161-29449180 | MS.gene53694:CDS | 55.0% | |
| CAGCTCCACCAACAATGCCA+TGG | - | chr1.3:29449328-29449347 | None:intergenic | 55.0% | |
| CGCCTAACCCTCCAATTCCA+TGG | - | chr1.3:29449466-29449485 | None:intergenic | 55.0% | |
| CTGGAATCGGTGGCTTCCAT+GGG | + | chr1.3:29449270-29449289 | MS.gene53694:CDS | 55.0% | |
| GCTCACCATGGCATTGTTGG+TGG | + | chr1.3:29449320-29449339 | MS.gene53694:CDS | 55.0% | |
| GGAGGTGGAATTGGGAAGGT+TGG | + | chr1.3:29449050-29449069 | MS.gene53694:CDS | 55.0% | |
| GGTGCTCACCATGGCATTGT+TGG | + | chr1.3:29449317-29449336 | MS.gene53694:CDS | 55.0% | |
| GGTGGAATTGGGAAGGTTGG+TGG | + | chr1.3:29449053-29449072 | MS.gene53694:CDS | 55.0% | |
| GGTGGTCACCATGGAATTGG+AGG | + | chr1.3:29449455-29449474 | MS.gene53694:CDS | 55.0% | |
| TTGGAGGGTTAGGCGGTGTT+GGG | + | chr1.3:29449471-29449490 | MS.gene53694:CDS | 55.0% | |
| ! | AAGTTTGGTGGCCTTGGTGG+TGG | + | chr1.3:29449245-29449264 | MS.gene53694:CDS | 55.0% |
| ! | AAGTTTGGTGGGATTGGGGG+TGG | + | chr1.3:29449149-29449168 | MS.gene53694:CDS | 55.0% |
| ! | CATGGCATTGTTGGTGGAGC+TGG | + | chr1.3:29449326-29449345 | MS.gene53694:CDS | 55.0% |
| ! | GCTGGAATTGGTGGCTTCCA+TGG | + | chr1.3:29449407-29449426 | MS.gene53694:CDS | 55.0% |
| ! | GCTTCCATGGGATTGGTGGT+GGG | + | chr1.3:29449282-29449301 | MS.gene53694:CDS | 55.0% |
| ! | GGAAAGTTTGGTGGCCTTGG+TGG | + | chr1.3:29449242-29449261 | MS.gene53694:CDS | 55.0% |
| ! | GGAGGTTTAGGTGGTGGTAG+TGG | + | chr1.3:29449614-29449633 | MS.gene53694:CDS | 55.0% |
| ! | GGAGTTCTTGGTGGTCACCA+TGG | + | chr1.3:29449446-29449465 | MS.gene53694:CDS | 55.0% |
| ! | GGATTTGCAGGTGGCTTTGC+TGG | + | chr1.3:29448972-29448991 | MS.gene53694:CDS | 55.0% |
| ! | GGGAAGTTTGGTGGGATAGG+TGG | + | chr1.3:29449212-29449231 | MS.gene53694:CDS | 55.0% |
| ! | GGGTGGTGGTACTACTGGTT+TGG | + | chr1.3:29449751-29449770 | MS.gene53694:CDS | 55.0% |
| ! | GGTGGCATTGGAGGTGGAAT+TGG | + | chr1.3:29449041-29449060 | MS.gene53694:CDS | 55.0% |
| ! | GGTGGTATTGGGAAGGTTGG+TGG | + | chr1.3:29449011-29449030 | MS.gene53694:CDS | 55.0% |
| ! | GGTGGTGGTATTGGGAAGGT+TGG | + | chr1.3:29449008-29449027 | MS.gene53694:CDS | 55.0% |
| ! | GGTTTGGGTGGTGGTACTAC+TGG | + | chr1.3:29449746-29449765 | MS.gene53694:CDS | 55.0% |
| ! | GTGGCTTTGCTGGGATTGGT+GGG | + | chr1.3:29448982-29449001 | MS.gene53694:CDS | 55.0% |
| ! | TGGCTTTGCTGGGATTGGTG+GGG | + | chr1.3:29448983-29449002 | MS.gene53694:CDS | 55.0% |
| ! | TTAGGCGGTGTTGGGGGTTT+AGG | + | chr1.3:29449479-29449498 | MS.gene53694:CDS | 55.0% |
| ! | TTTGCTGGGATTGGTGGGGT+TGG | + | chr1.3:29448987-29449006 | MS.gene53694:CDS | 55.0% |
| !! | AGGTGGTGGAAGTGGTGGTT+TGG | + | chr1.3:29449730-29449749 | MS.gene53694:CDS | 55.0% |
| !! | ATTGGTGGTGGCATTGGAGG+TGG | + | chr1.3:29449035-29449054 | MS.gene53694:CDS | 55.0% |
| !! | ATTGGTGGTGGGATAGGTGG+TGG | + | chr1.3:29449119-29449138 | MS.gene53694:CDS | 55.0% |
| !! | CTTCCATGGGATTGGTGGTG+GGG | + | chr1.3:29449283-29449302 | MS.gene53694:CDS | 55.0% |
| !! | CTTGGTGGTGCAGCTGGAAT+TGG | + | chr1.3:29449395-29449414 | MS.gene53694:CDS | 55.0% |
| !! | CTTGGTGGTGGTGCTGGAAT+CGG | + | chr1.3:29449257-29449276 | MS.gene53694:CDS | 55.0% |
| !! | GGAATTGGTGGTGGCATTGG+AGG | + | chr1.3:29449032-29449051 | MS.gene53694:CDS | 55.0% |
| !! | GGGAAGGTTGGTGGAATTGG+TGG | + | chr1.3:29449020-29449039 | MS.gene53694:CDS | 55.0% |
| !! | GGTGGAATTGGTGGTGGCAT+TGG | + | chr1.3:29449029-29449048 | MS.gene53694:CDS | 55.0% |
| !! | GGTGGGATAGGTGGTGGAAT+AGG | + | chr1.3:29449125-29449144 | MS.gene53694:CDS | 55.0% |
| !! | GGTGGTGGAAGTGGTGGTTT+GGG | + | chr1.3:29449731-29449750 | MS.gene53694:CDS | 55.0% |
| !! | GGTGGTGTTGGTGGATTTGC+AGG | + | chr1.3:29448960-29448979 | MS.gene53694:CDS | 55.0% |
| !! | GGTGTTGGTGGATTTGCAGG+TGG | + | chr1.3:29448963-29448982 | MS.gene53694:CDS | 55.0% |
| !! | GGTTGGTGGTGGTATTGGGA+AGG | + | chr1.3:29449004-29449023 | MS.gene53694:CDS | 55.0% |
| !! | GTGGGGTTGGTGGTGGTATT+GGG | + | chr1.3:29449000-29449019 | MS.gene53694:CDS | 55.0% |
| !! | TTAGGTGGTGGTAGTGGGGT+TGG | + | chr1.3:29449620-29449639 | MS.gene53694:CDS | 55.0% |
| ACCCAAGCCTCCAACTCCTC+CGG | - | chr1.3:29449660-29449679 | None:intergenic | 60.0% | |
| ACCCACACCTCCAACTCCTC+CGG | - | chr1.3:29449687-29449706 | None:intergenic | 60.0% | |
| ATCGGTGGCGTCCATGGGAT+AGG | + | chr1.3:29449350-29449369 | MS.gene53694:CDS | 60.0% | |
| CAACCCCACCACCAATCCCA+TGG | - | chr1.3:29449427-29449446 | None:intergenic | 60.0% | |
| CAGCTCCACCACCAATCCCA+TGG | - | chr1.3:29449289-29449308 | None:intergenic | 60.0% | |
| CAGCTGCACCACCTATCCCA+TGG | - | chr1.3:29449364-29449383 | None:intergenic | 60.0% | |
| CATGGGATAGGTGGTGCAGC+TGG | + | chr1.3:29449362-29449381 | MS.gene53694:CDS | 60.0% | |
| CGATTCCAGCACCACCACCA+AGG | - | chr1.3:29449259-29449278 | None:intergenic | 60.0% | |
| GCAGGAGGAGTAGGAGGCTT+AGG | + | chr1.3:29449551-29449570 | MS.gene53694:CDS | 60.0% | |
| GCTGGAATCGGTGGCTTCCA+TGG | + | chr1.3:29449269-29449288 | MS.gene53694:CDS | 60.0% | |
| GCTGGAGGAGTGGGAGGTTT+GGG | + | chr1.3:29449524-29449543 | MS.gene53694:CDS | 60.0% | |
| GGAGGAGTAGGAGGCTTAGG+TGG | + | chr1.3:29449554-29449573 | MS.gene53694:CDS | 60.0% | |
| GGTGGCTTCCATGGGATTGG+TGG | + | chr1.3:29449278-29449297 | MS.gene53694:CDS | 60.0% | |
| GGTGGGGTTGGAGTTCTTGG+TGG | + | chr1.3:29449437-29449456 | MS.gene53694:CDS | 60.0% | |
| GGTGGTGCAGCTGGAATTGG+TGG | + | chr1.3:29449398-29449417 | MS.gene53694:CDS | 60.0% | |
| GTTGGAGGCTTGGGTGGTAC+CGG | + | chr1.3:29449665-29449684 | MS.gene53694:CDS | 60.0% | |
| GTTGGGGGTTTAGGTGGGGT+TGG | + | chr1.3:29449488-29449507 | MS.gene53694:CDS | 60.0% | |
| TACCGGAGGAGTTGGAGGTG+TGG | + | chr1.3:29449682-29449701 | MS.gene53694:CDS | 60.0% | |
| TTGGGTGGAGCAGGAGGAGT+AGG | + | chr1.3:29449542-29449561 | MS.gene53694:CDS | 60.0% | |
| ! | ACCGGAGGAGTTGGAGGTGT+GGG | + | chr1.3:29449683-29449702 | MS.gene53694:CDS | 60.0% |
| ! | AGGAGTTGGAGGTGTGGGTG+GGG | + | chr1.3:29449688-29449707 | MS.gene53694:CDS | 60.0% |
| ! | CGGTGTTGGGGGTTTAGGTG+GGG | + | chr1.3:29449484-29449503 | MS.gene53694:CDS | 60.0% |
| ! | GAGGAGTTGGAGGTGTGGGT+GGG | + | chr1.3:29449687-29449706 | MS.gene53694:CDS | 60.0% |
| ! | GCAGGTGGCTTTGCTGGGAT+TGG | + | chr1.3:29448978-29448997 | MS.gene53694:CDS | 60.0% |
| ! | GCGGTGTTGGGGGTTTAGGT+GGG | + | chr1.3:29449483-29449502 | MS.gene53694:CDS | 60.0% |
| ! | GGAAGTGGTGGTTTGGGTGG+TGG | + | chr1.3:29449737-29449756 | MS.gene53694:CDS | 60.0% |
| ! | GGCTTCCATGGGATTGGTGG+TGG | + | chr1.3:29449281-29449300 | MS.gene53694:CDS | 60.0% |
| ! | GGTGGAAGTGGTGGTTTGGG+TGG | + | chr1.3:29449734-29449753 | MS.gene53694:CDS | 60.0% |
| ! | GGTGGCTTTGCTGGGATTGG+TGG | + | chr1.3:29448981-29449000 | MS.gene53694:CDS | 60.0% |
| ! | GTGGTGCAGCTGGAGTTGGT+GGG | + | chr1.3:29449372-29449391 | MS.gene53694:CDS | 60.0% |
| ! | GTTGGTGGAGCTGGTATCGG+TGG | + | chr1.3:29449335-29449354 | MS.gene53694:CDS | 60.0% |
| ! | TGGAGGGTTAGGCGGTGTTG+GGG | + | chr1.3:29449472-29449491 | MS.gene53694:CDS | 60.0% |
| ! | TTGGGTGGTACCGGAGGAGT+TGG | + | chr1.3:29449674-29449693 | MS.gene53694:CDS | 60.0% |
| !! | CATGGGATTGGTGGTGGAGC+TGG | + | chr1.3:29449287-29449306 | MS.gene53694:CDS | 60.0% |
| !! | CATGGGATTGGTGGTGGGGT+TGG | + | chr1.3:29449425-29449444 | MS.gene53694:CDS | 60.0% |
| !! | CTGGTATCGGTGGCGTCCAT+GGG | + | chr1.3:29449345-29449364 | MS.gene53694:CDS | 60.0% |
| !! | GGAGGCTTAGGTGGTGGAAG+TGG | + | chr1.3:29449722-29449741 | MS.gene53694:CDS | 60.0% |
| !! | GGCTTAGGTGGTGGAAGTGG+TGG | + | chr1.3:29449725-29449744 | MS.gene53694:CDS | 60.0% |
| !! | GGGATTGGTGGTGGGATAGG+TGG | + | chr1.3:29449116-29449135 | MS.gene53694:CDS | 60.0% |
| !! | GGTAGTGGGGTTGGAGGCTT+GGG | + | chr1.3:29449629-29449648 | MS.gene53694:CDS | 60.0% |
| !! | GGTGGGATTGGTGGTGGGAT+AGG | + | chr1.3:29449113-29449132 | MS.gene53694:CDS | 60.0% |
| !! | GGTGGGGTTGGTGGTGGTAT+TGG | + | chr1.3:29448999-29449018 | MS.gene53694:CDS | 60.0% |
| !! | GGTGGTGGAGGTTTAGGTGG+TGG | + | chr1.3:29449608-29449627 | MS.gene53694:CDS | 60.0% |
| !! | GGTGGTGGGGTTGGAGTTCT+TGG | + | chr1.3:29449434-29449453 | MS.gene53694:CDS | 60.0% |
| !! | GGTGGTGGTGGAGGTTTAGG+TGG | + | chr1.3:29449605-29449624 | MS.gene53694:CDS | 60.0% |
| !! | GGTGGTGGTGGTGGAGGTTT+AGG | + | chr1.3:29449602-29449621 | MS.gene53694:CDS | 60.0% |
| !! | GTGGGGTTGGTGGTTTGGGT+GGG | + | chr1.3:29449501-29449520 | MS.gene53694:CDS | 60.0% |
| !! | TGGGGTTGGTGGTTTGGGTG+GGG | + | chr1.3:29449502-29449521 | MS.gene53694:CDS | 60.0% |
| !! | TGGTAGTGGGGTTGGAGGCT+TGG | + | chr1.3:29449628-29449647 | MS.gene53694:CDS | 60.0% |
| ACCTAAGCCTCCGGCACCAC+CGG | - | chr1.3:29449714-29449733 | None:intergenic | 65.0% | |
| AGTGGGGTTGGAGGCTTGGG+TGG | + | chr1.3:29449632-29449651 | MS.gene53694:CDS | 65.0% | |
| CAAGCCGCCAACACCACCAC+CGG | - | chr1.3:29449582-29449601 | None:intergenic | 65.0% | |
| GCCGGAGGAGTTGGAGGCTT+GGG | + | chr1.3:29449656-29449675 | MS.gene53694:CDS | 65.0% | |
| GGAGGAGTGGGAGGTTTGGG+TGG | + | chr1.3:29449527-29449546 | MS.gene53694:CDS | 65.0% | |
| GGAGGAGTTGGAGGCTTGGG+TGG | + | chr1.3:29449659-29449678 | MS.gene53694:CDS | 65.0% | |
| GGAGGTTTGGGTGGAGCAGG+AGG | + | chr1.3:29449536-29449555 | MS.gene53694:CDS | 65.0% | |
| GGCTGGAGGAGTGGGAGGTT+TGG | + | chr1.3:29449523-29449542 | MS.gene53694:CDS | 65.0% | |
| GGGGGTGGAGCTGGAATTGG+TGG | + | chr1.3:29449164-29449183 | MS.gene53694:CDS | 65.0% | |
| GGGGGTTTAGGTGGGGTTGG+TGG | + | chr1.3:29449491-29449510 | MS.gene53694:CDS | 65.0% | |
| GGTGGAGCAGGAGGAGTAGG+AGG | + | chr1.3:29449545-29449564 | MS.gene53694:CDS | 65.0% | |
| GGTGGCGTCCATGGGATAGG+TGG | + | chr1.3:29449353-29449372 | MS.gene53694:CDS | 65.0% | |
| GGTGGTGCAGCTGGAGTTGG+TGG | + | chr1.3:29449371-29449390 | MS.gene53694:CDS | 65.0% | |
| GTAGGAGGCTTAGGTGGCGC+CGG | + | chr1.3:29449560-29449579 | MS.gene53694:CDS | 65.0% | |
| GTGGGAGGTTTGGGTGGAGC+AGG | + | chr1.3:29449533-29449552 | MS.gene53694:CDS | 65.0% | |
| GTTGGAGGCTTGGGTGGTGC+CGG | + | chr1.3:29449638-29449657 | MS.gene53694:CDS | 65.0% | |
| TGCCGGAGGAGTTGGAGGCT+TGG | + | chr1.3:29449655-29449674 | MS.gene53694:CDS | 65.0% | |
| TTGGGTGGGGCTGGAGGAGT+GGG | + | chr1.3:29449515-29449534 | MS.gene53694:CDS | 65.0% | |
| TTTGGGTGGGGCTGGAGGAG+TGG | + | chr1.3:29449514-29449533 | MS.gene53694:CDS | 65.0% | |
| ! | GCTGGGATTGGTGGGGTTGG+TGG | + | chr1.3:29448990-29449009 | MS.gene53694:CDS | 65.0% |
| ! | GGAGGAGTTGGAGGTGTGGG+TGG | + | chr1.3:29449686-29449705 | MS.gene53694:CDS | 65.0% |
| ! | GGAGGGTTAGGCGGTGTTGG+GGG | + | chr1.3:29449473-29449492 | MS.gene53694:CDS | 65.0% |
| ! | GGCGGTGTTGGGGGTTTAGG+TGG | + | chr1.3:29449482-29449501 | MS.gene53694:CDS | 65.0% |
| ! | GGTGGTACCGGAGGAGTTGG+AGG | + | chr1.3:29449677-29449696 | MS.gene53694:CDS | 65.0% |
| ! | GGTGGTGGTGCTGGAATCGG+TGG | + | chr1.3:29449260-29449279 | MS.gene53694:CDS | 65.0% |
| ! | TTGGGTGGTGCCGGAGGAGT+TGG | + | chr1.3:29449647-29449666 | MS.gene53694:CDS | 65.0% |
| !! | GCAGCTGGAGTTGGTGGGCT+TGG | + | chr1.3:29449377-29449396 | MS.gene53694:CDS | 65.0% |
| !! | GCTGGAGTTGGTGGGCTTGG+TGG | + | chr1.3:29449380-29449399 | MS.gene53694:CDS | 65.0% |
| !! | GCTGGTATCGGTGGCGTCCA+TGG | + | chr1.3:29449344-29449363 | MS.gene53694:CDS | 65.0% |
| !! | GGGATTGGTGGGGTTGGTGG+TGG | + | chr1.3:29448993-29449012 | MS.gene53694:CDS | 65.0% |
| !! | GGTGGGGTTGGTGGTTTGGG+TGG | + | chr1.3:29449500-29449519 | MS.gene53694:CDS | 65.0% |
| !! | GGTGGTGGTAGTGGGGTTGG+AGG | + | chr1.3:29449623-29449642 | MS.gene53694:CDS | 65.0% |
| !! | GGTGGTGGTGTTGGCGGCTT+GGG | + | chr1.3:29449581-29449600 | MS.gene53694:CDS | 65.0% |
| !! | GTTGGTGGTTTGGGTGGGGC+TGG | + | chr1.3:29449506-29449525 | MS.gene53694:CDS | 65.0% |
| GGTGGGATTGGGGGTGGAGC+TGG | + | chr1.3:29449155-29449174 | MS.gene53694:CDS | 70.0% | |
| ! | GGAGGCTTGGGTGGTACCGG+AGG | + | chr1.3:29449668-29449687 | MS.gene53694:CDS | 70.0% |
| ! | GGTGCCGGAGGCTTAGGTGG+TGG | + | chr1.3:29449716-29449735 | MS.gene53694:CDS | 70.0% |
| ! | GGTGGTGCCGGAGGAGTTGG+AGG | + | chr1.3:29449650-29449669 | MS.gene53694:CDS | 70.0% |
| ! | GGTGGTGCCGGAGGCTTAGG+TGG | + | chr1.3:29449713-29449732 | MS.gene53694:CDS | 70.0% |
| ! | GGTGGTTTGGGTGGGGCTGG+AGG | + | chr1.3:29449509-29449528 | MS.gene53694:CDS | 70.0% |
| ! | GTTGGAGGTGTGGGTGGGGC+CGG | + | chr1.3:29449692-29449711 | MS.gene53694:CDS | 70.0% |
| ! | GTTGGCGGCTTGGGTGGTGG+TGG | + | chr1.3:29449590-29449609 | MS.gene53694:CDS | 70.0% |
| !! | CGGTGGTGGTGTTGGCGGCT+TGG | + | chr1.3:29449580-29449599 | MS.gene53694:CDS | 70.0% |
| !! | GGCTTGGGTGGTGGTGGTGG+AGG | + | chr1.3:29449596-29449615 | MS.gene53694:CDS | 70.0% |
| !! | GGTGGCCTTGGTGGTGGTGC+TGG | + | chr1.3:29449251-29449270 | MS.gene53694:CDS | 70.0% |
| !! | GGTGGGCTTGGTGGTGCAGC+TGG | + | chr1.3:29449389-29449408 | MS.gene53694:CDS | 70.0% |
| !! | GGTGGTGTTGGCGGCTTGGG+TGG | + | chr1.3:29449584-29449603 | MS.gene53694:CDS | 70.0% |
| !! | GGTGTTGGCGGCTTGGGTGG+TGG | + | chr1.3:29449587-29449606 | MS.gene53694:CDS | 70.0% |
| GGTGGGGCTGGAGGAGTGGG+AGG | + | chr1.3:29449518-29449537 | MS.gene53694:CDS | 75.0% | |
| ! | GCCGGTGGTGCCGGAGGCTT+AGG | + | chr1.3:29449710-29449729 | MS.gene53694:CDS | 75.0% |
| ! | GGAGGCTTAGGTGGCGCCGG+TGG | + | chr1.3:29449563-29449582 | MS.gene53694:CDS | 75.0% |
| ! | GGAGGCTTGGGTGGTGCCGG+AGG | + | chr1.3:29449641-29449660 | MS.gene53694:CDS | 75.0% |
| !! | GGCGCCGGTGGTGGTGTTGG+CGG | + | chr1.3:29449575-29449594 | MS.gene53694:CDS | 75.0% |
| !! | GGCGGCTTGGGTGGTGGTGG+TGG | + | chr1.3:29449593-29449612 | MS.gene53694:CDS | 75.0% |
| !! | GGCTTAGGTGGCGCCGGTGG+TGG | + | chr1.3:29449566-29449585 | MS.gene53694:CDS | 75.0% |
| !! | GGTGGCGCCGGTGGTGGTGT+TGG | + | chr1.3:29449572-29449591 | MS.gene53694:CDS | 75.0% |
| ! | GTGGGTGGGGCCGGTGGTGC+CGG | + | chr1.3:29449701-29449720 | MS.gene53694:CDS | 80.0% |
| !! | GGAGGTGTGGGTGGGGCCGG+TGG | + | chr1.3:29449695-29449714 | MS.gene53694:CDS | 80.0% |
| !! | GGTGGGGCCGGTGGTGCCGG+AGG | + | chr1.3:29449704-29449723 | MS.gene53694:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 29448774 | 29449802 | 29448774 | ID=MS.gene53694 |
| chr1.3 | mRNA | 29448774 | 29449802 | 29448774 | ID=MS.gene53694.t1;Parent=MS.gene53694 |
| chr1.3 | exon | 29448774 | 29449802 | 29448774 | ID=MS.gene53694.t1.exon1;Parent=MS.gene53694.t1 |
| chr1.3 | CDS | 29448774 | 29449802 | 29448774 | ID=cds.MS.gene53694.t1;Parent=MS.gene53694.t1 |
| Gene Sequence |
| Protein sequence |
