Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54329.t1 | XP_003593733.1 | 98.5 | 533 | 8 | 0 | 9 | 541 | 1 | 533 | 0.00E+00 | 1078.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54329.t1 | Q9SKT6 | 79.9 | 536 | 105 | 2 | 9 | 541 | 1 | 536 | 4.4e-257 | 888.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54329.t1 | G7IKA2 | 98.5 | 533 | 8 | 0 | 9 | 541 | 1 | 533 | 0.0e+00 | 1078.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene54329 | MS.gene022991 | PPI |
MS.gene027296 | MS.gene54329 | PPI |
MS.gene84430 | MS.gene54329 | PPI |
MS.gene051724 | MS.gene54329 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54329.t1 | MTR_2g015550 | 98.499 | 533 | 8 | 0 | 9 | 541 | 1 | 533 | 0.0 | 1103 |
MS.gene54329.t1 | MTR_2g006790 | 82.210 | 534 | 69 | 3 | 9 | 541 | 1 | 509 | 0.0 | 898 |
MS.gene54329.t1 | MTR_4g109890 | 56.530 | 536 | 223 | 6 | 9 | 538 | 1 | 532 | 0.0 | 627 |
MS.gene54329.t1 | MTR_2g461670 | 49.745 | 589 | 235 | 7 | 9 | 538 | 1 | 587 | 0.0 | 596 |
MS.gene54329.t1 | MTR_2g027740 | 46.894 | 499 | 257 | 5 | 44 | 541 | 175 | 666 | 1.20e-164 | 483 |
MS.gene54329.t1 | MTR_3g107930 | 49.789 | 474 | 221 | 6 | 75 | 540 | 122 | 586 | 2.27e-160 | 469 |
MS.gene54329.t1 | MTR_3g107930 | 49.789 | 474 | 221 | 6 | 75 | 540 | 199 | 663 | 2.28e-159 | 469 |
MS.gene54329.t1 | MTR_8g092000 | 46.061 | 495 | 247 | 5 | 48 | 541 | 104 | 579 | 8.05e-157 | 460 |
MS.gene54329.t1 | MTR_7g075840 | 48.498 | 466 | 231 | 5 | 78 | 540 | 203 | 662 | 1.56e-154 | 457 |
MS.gene54329.t1 | MTR_8g033360 | 48.387 | 434 | 213 | 4 | 78 | 506 | 170 | 597 | 4.37e-148 | 442 |
MS.gene54329.t1 | MTR_7g055600 | 50.773 | 388 | 185 | 3 | 157 | 540 | 47 | 432 | 4.39e-139 | 409 |
MS.gene54329.t1 | MTR_7g057530 | 50.773 | 388 | 185 | 3 | 157 | 540 | 47 | 432 | 4.39e-139 | 409 |
MS.gene54329.t1 | MTR_6g016380 | 43.004 | 486 | 242 | 10 | 80 | 540 | 78 | 553 | 3.53e-129 | 388 |
MS.gene54329.t1 | MTR_7g012370 | 42.569 | 397 | 198 | 8 | 157 | 529 | 134 | 524 | 1.03e-111 | 343 |
MS.gene54329.t1 | MTR_2g082650 | 39.753 | 405 | 220 | 8 | 157 | 540 | 9 | 410 | 3.37e-110 | 335 |
MS.gene54329.t1 | MTR_2g082650 | 39.753 | 405 | 220 | 8 | 157 | 540 | 138 | 539 | 1.21e-108 | 335 |
MS.gene54329.t1 | MTR_6g013840 | 43.735 | 407 | 199 | 8 | 157 | 539 | 129 | 529 | 7.39e-106 | 327 |
MS.gene54329.t1 | MTR_7g096160 | 37.961 | 461 | 253 | 8 | 85 | 541 | 222 | 653 | 3.55e-103 | 324 |
MS.gene54329.t1 | MTR_4g133570 | 40.204 | 393 | 215 | 7 | 166 | 539 | 70 | 461 | 6.75e-102 | 315 |
MS.gene54329.t1 | MTR_3g452360 | 37.717 | 403 | 236 | 6 | 149 | 538 | 126 | 526 | 2.24e-94 | 298 |
MS.gene54329.t1 | MTR_3g452360 | 38.786 | 379 | 217 | 6 | 173 | 538 | 1 | 377 | 1.17e-93 | 291 |
MS.gene54329.t1 | MTR_1g070490 | 37.069 | 464 | 255 | 10 | 83 | 540 | 165 | 597 | 4.27e-86 | 279 |
MS.gene54329.t1 | MTR_7g012370 | 40.764 | 314 | 159 | 6 | 157 | 449 | 134 | 441 | 4.30e-78 | 253 |
MS.gene54329.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 80 | 539 | 118 | 562 | 2.36e-58 | 204 |
MS.gene54329.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 80 | 539 | 158 | 602 | 3.64e-58 | 204 |
MS.gene54329.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 80 | 539 | 178 | 622 | 6.67e-58 | 204 |
MS.gene54329.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 80 | 539 | 178 | 622 | 7.02e-58 | 204 |
MS.gene54329.t1 | MTR_7g074680 | 30.556 | 468 | 294 | 10 | 80 | 539 | 198 | 642 | 9.52e-58 | 204 |
MS.gene54329.t1 | MTR_7g074680 | 29.897 | 485 | 292 | 12 | 80 | 539 | 198 | 659 | 4.21e-55 | 197 |
MS.gene54329.t1 | MTR_4g133942 | 50.746 | 201 | 68 | 4 | 345 | 541 | 160 | 333 | 1.40e-53 | 185 |
MS.gene54329.t1 | MTR_3g092310 | 33.182 | 220 | 137 | 6 | 323 | 533 | 117 | 335 | 7.30e-25 | 106 |
MS.gene54329.t1 | MTR_7g109210 | 33.846 | 195 | 120 | 5 | 347 | 532 | 159 | 353 | 4.09e-24 | 104 |
MS.gene54329.t1 | MTR_7g094230 | 33.143 | 175 | 111 | 4 | 347 | 515 | 151 | 325 | 2.05e-22 | 99.4 |
MS.gene54329.t1 | MTR_5g036580 | 26.452 | 310 | 186 | 11 | 232 | 527 | 75 | 356 | 2.16e-22 | 99.8 |
MS.gene54329.t1 | MTR_6g008900 | 31.401 | 207 | 124 | 7 | 347 | 535 | 165 | 371 | 2.03e-21 | 96.7 |
MS.gene54329.t1 | MTR_4g071620 | 31.401 | 207 | 124 | 7 | 347 | 535 | 165 | 371 | 2.03e-21 | 96.7 |
MS.gene54329.t1 | MTR_4g118030 | 29.907 | 214 | 138 | 8 | 323 | 528 | 122 | 331 | 9.06e-21 | 94.4 |
MS.gene54329.t1 | MTR_8g078240 | 32.796 | 186 | 116 | 5 | 347 | 523 | 142 | 327 | 3.65e-20 | 92.4 |
MS.gene54329.t1 | MTR_3g111600 | 31.522 | 184 | 119 | 5 | 347 | 523 | 80 | 263 | 4.55e-19 | 87.8 |
MS.gene54329.t1 | MTR_5g019220 | 30.660 | 212 | 139 | 6 | 319 | 523 | 139 | 349 | 3.83e-18 | 86.7 |
MS.gene54329.t1 | MTR_1g021855 | 31.892 | 185 | 118 | 5 | 347 | 523 | 165 | 349 | 6.29e-18 | 85.9 |
MS.gene54329.t1 | MTR_1g089820 | 30.151 | 199 | 132 | 5 | 323 | 515 | 131 | 328 | 1.54e-15 | 78.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54329.t1 | AT2G20810 | 79.851 | 536 | 105 | 2 | 9 | 541 | 1 | 536 | 0.0 | 877 |
MS.gene54329.t1 | AT1G18580 | 55.410 | 536 | 231 | 5 | 9 | 538 | 1 | 534 | 0.0 | 603 |
MS.gene54329.t1 | AT5G47780 | 48.723 | 470 | 232 | 4 | 73 | 540 | 152 | 614 | 6.00e-167 | 487 |
MS.gene54329.t1 | AT3G61130 | 47.966 | 467 | 233 | 5 | 78 | 541 | 213 | 672 | 1.99e-163 | 480 |
MS.gene54329.t1 | AT4G38270 | 47.899 | 476 | 233 | 7 | 75 | 541 | 206 | 675 | 4.65e-157 | 464 |
MS.gene54329.t1 | AT4G38270 | 47.899 | 476 | 233 | 7 | 75 | 541 | 210 | 679 | 5.42e-157 | 464 |
MS.gene54329.t1 | AT3G25140 | 51.289 | 388 | 183 | 3 | 157 | 540 | 172 | 557 | 3.70e-147 | 434 |
MS.gene54329.t1 | AT2G46480 | 44.048 | 504 | 253 | 10 | 44 | 538 | 53 | 536 | 9.39e-141 | 417 |
MS.gene54329.t1 | AT2G46480 | 44.048 | 504 | 253 | 10 | 44 | 538 | 66 | 549 | 1.85e-140 | 417 |
MS.gene54329.t1 | AT3G02350 | 44.699 | 481 | 241 | 8 | 80 | 540 | 84 | 559 | 3.08e-130 | 391 |
MS.gene54329.t1 | AT2G46480 | 41.071 | 504 | 243 | 11 | 44 | 538 | 53 | 511 | 1.02e-124 | 375 |
MS.gene54329.t1 | AT2G46480 | 41.071 | 504 | 243 | 11 | 44 | 538 | 66 | 524 | 1.83e-124 | 375 |
MS.gene54329.t1 | AT3G01040 | 42.892 | 408 | 203 | 8 | 156 | 539 | 128 | 529 | 5.47e-113 | 346 |
MS.gene54329.t1 | AT3G01040 | 42.892 | 408 | 203 | 8 | 156 | 539 | 128 | 529 | 5.47e-113 | 346 |
MS.gene54329.t1 | AT5G15470 | 42.054 | 409 | 207 | 8 | 156 | 540 | 128 | 530 | 7.48e-109 | 335 |
MS.gene54329.t1 | AT2G30575 | 36.419 | 497 | 276 | 8 | 49 | 541 | 149 | 609 | 1.18e-108 | 337 |
MS.gene54329.t1 | AT5G54690 | 38.806 | 402 | 226 | 8 | 158 | 540 | 132 | 532 | 3.63e-106 | 328 |
MS.gene54329.t1 | AT1G06780 | 37.931 | 493 | 267 | 10 | 53 | 541 | 131 | 588 | 3.24e-105 | 328 |
MS.gene54329.t1 | AT1G06780 | 37.931 | 493 | 267 | 10 | 53 | 541 | 144 | 601 | 9.56e-105 | 327 |
MS.gene54329.t1 | AT3G01040 | 39.951 | 408 | 182 | 9 | 156 | 539 | 128 | 496 | 1.11e-97 | 305 |
MS.gene54329.t1 | AT3G58790 | 38.677 | 393 | 220 | 8 | 167 | 540 | 16 | 406 | 1.03e-88 | 279 |
MS.gene54329.t1 | AT3G58790 | 37.063 | 429 | 241 | 10 | 130 | 538 | 117 | 536 | 2.46e-87 | 280 |
MS.gene54329.t1 | AT2G38650 | 32.265 | 468 | 285 | 9 | 80 | 541 | 177 | 618 | 3.56e-65 | 223 |
MS.gene54329.t1 | AT2G38650 | 32.265 | 468 | 285 | 9 | 80 | 541 | 177 | 618 | 3.56e-65 | 223 |
MS.gene54329.t1 | AT2G38650 | 31.565 | 377 | 227 | 8 | 80 | 451 | 177 | 527 | 3.29e-44 | 164 |
MS.gene54329.t1 | AT1G70090 | 25.868 | 317 | 193 | 10 | 232 | 534 | 78 | 366 | 1.69e-24 | 105 |
MS.gene54329.t1 | AT1G70090 | 25.868 | 317 | 193 | 10 | 232 | 534 | 78 | 366 | 1.69e-24 | 105 |
MS.gene54329.t1 | AT1G24170 | 25.552 | 317 | 194 | 11 | 232 | 534 | 81 | 369 | 6.06e-21 | 95.5 |
MS.gene54329.t1 | AT4G02130 | 30.102 | 196 | 128 | 5 | 347 | 533 | 150 | 345 | 1.49e-20 | 93.6 |
MS.gene54329.t1 | AT4G02130 | 30.102 | 196 | 128 | 5 | 347 | 533 | 150 | 345 | 1.49e-20 | 93.6 |
MS.gene54329.t1 | AT4G02130 | 30.102 | 196 | 128 | 5 | 347 | 533 | 150 | 345 | 1.49e-20 | 93.6 |
MS.gene54329.t1 | AT3G62660 | 26.962 | 293 | 171 | 9 | 250 | 532 | 99 | 358 | 2.08e-20 | 93.6 |
MS.gene54329.t1 | AT1G02720 | 27.302 | 315 | 189 | 10 | 230 | 533 | 75 | 360 | 3.32e-20 | 92.8 |
MS.gene54329.t1 | AT1G02720 | 27.302 | 315 | 189 | 10 | 230 | 533 | 75 | 360 | 3.32e-20 | 92.8 |
MS.gene54329.t1 | AT3G28340 | 25.965 | 285 | 174 | 10 | 247 | 523 | 84 | 339 | 5.94e-20 | 92.0 |
MS.gene54329.t1 | AT1G19300 | 31.522 | 184 | 119 | 5 | 347 | 523 | 150 | 333 | 9.16e-20 | 91.3 |
MS.gene54329.t1 | AT3G06260 | 29.787 | 188 | 124 | 5 | 347 | 528 | 150 | 335 | 1.85e-19 | 90.5 |
MS.gene54329.t1 | AT1G13250 | 32.787 | 183 | 117 | 4 | 347 | 523 | 144 | 326 | 4.77e-18 | 86.3 |
MS.gene54329.t1 | AT3G50760 | 25.436 | 287 | 174 | 8 | 247 | 523 | 66 | 322 | 7.02e-17 | 82.4 |
Find 108 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTAAGCATGGACAGATATTT+AGG | 0.176518 | 2.3:+69731930 | None:intergenic |
CTTTCCACCATCACTGTTTC+CGG | 0.176992 | 2.3:+69731974 | None:intergenic |
TCTGATTCTATAGTTGTTAA+AGG | 0.192776 | 2.3:+69732557 | None:intergenic |
GATTTGAATGGGAATGTTAA+TGG | 0.254551 | 2.3:-69731801 | MS.gene54329:CDS |
ACATCTCTTCGGTAATATTA+AGG | 0.257268 | 2.3:+69732744 | None:intergenic |
CACTTAGTTCCCAAGCAAAT+TGG | 0.261830 | 2.3:+69732633 | None:intergenic |
GATGCATGCGGATGGGCATT+TGG | 0.261833 | 2.3:-69731690 | MS.gene54329:CDS |
GAGAATAGTTCAAGTATTTA+TGG | 0.277457 | 2.3:+69731742 | None:intergenic |
GGATCCATCGTGGCATGTAC+TGG | 0.298222 | 2.3:-69731517 | MS.gene54329:CDS |
CCTGAAGAAGATCGTGTTCC+TGG | 0.305211 | 2.3:-69731871 | MS.gene54329:CDS |
GCAAGTGGAGATGAAGATTA+AGG | 0.308264 | 2.3:-69732279 | MS.gene54329:CDS |
CCAAACCTTGGTTGAAGATT+GGG | 0.323300 | 2.3:-69731425 | MS.gene54329:CDS |
TCGTGGCATGTACTGGGTTT+TGG | 0.330769 | 2.3:-69731510 | MS.gene54329:CDS |
CCAGGAACACGATCTTCTTC+AGG | 0.343617 | 2.3:+69731871 | None:intergenic |
AGTGAAAAGAGTTCAAAATA+TGG | 0.351614 | 2.3:-69732410 | MS.gene54329:CDS |
CCCAATCTTCAACCAAGGTT+TGG | 0.377804 | 2.3:+69731425 | None:intergenic |
TCCAAACCTTGGTTGAAGAT+TGG | 0.380861 | 2.3:-69731426 | MS.gene54329:CDS |
TAAGCATGGACAGATATTTA+GGG | 0.391103 | 2.3:+69731931 | None:intergenic |
TCATCTGTTCTTCAAGAGCT+TGG | 0.400022 | 2.3:+69732441 | None:intergenic |
ATGCATGCGGATGGGCATTT+GGG | 0.402621 | 2.3:-69731689 | MS.gene54329:CDS |
AAAGTTGCATTGCTGCAATA+AGG | 0.409846 | 2.3:+69731353 | None:intergenic |
TCATAGTTGCACTGTCATAA+TGG | 0.413392 | 2.3:+69732486 | None:intergenic |
TTAGGGTTACGAAACTTGAT+AGG | 0.418201 | 2.3:+69731948 | None:intergenic |
GCTTATACTGTCTGGGTGTC+CGG | 0.419318 | 2.3:-69732358 | MS.gene54329:CDS |
TATCTGATCATTAAGTTGTC+TGG | 0.431525 | 2.3:+69732703 | None:intergenic |
TAACTGGCATCTACCACTAT+TGG | 0.432849 | 2.3:-69731626 | MS.gene54329:CDS |
CACCCCACGAAAGTCATTCA+TGG | 0.437582 | 2.3:+69732100 | None:intergenic |
TTACAACAAAAGCTTTAGCT+AGG | 0.438992 | 2.3:+69732678 | None:intergenic |
GTAACAATCTCCAATTTGCT+TGG | 0.440025 | 2.3:-69732643 | MS.gene54329:CDS |
AGACAGTGCTATCCGAGATA+TGG | 0.444268 | 2.3:-69732537 | MS.gene54329:CDS |
TGAACCATTCAGTTGTCAAC+CGG | 0.445715 | 2.3:+69732339 | None:intergenic |
GGGGCTGTACTGCACTTCAA+TGG | 0.449476 | 2.3:-69731453 | MS.gene54329:CDS |
AATGCCCATCCGCATGCATC+GGG | 0.461211 | 2.3:+69731693 | None:intergenic |
TAACAATCTCCAATTTGCTT+GGG | 0.461680 | 2.3:-69732642 | MS.gene54329:CDS |
CCATAAAATGTTAATAATCC+AGG | 0.463302 | 2.3:+69731555 | None:intergenic |
TTATGGACTAACAGAACCCT+TGG | 0.463314 | 2.3:-69731538 | MS.gene54329:CDS |
AAACTCGGCACTTTGCCACC+TGG | 0.467528 | 2.3:-69731573 | MS.gene54329:CDS |
TCAAAATGAGCTCTTATAAG+AGG | 0.468247 | 2.3:+69731717 | None:intergenic |
AAAAGAAATTGAAGGACAAA+AGG | 0.469978 | 2.3:-69732301 | MS.gene54329:CDS |
GGGCTGTACTGCACTTCAAT+GGG | 0.475347 | 2.3:-69731452 | MS.gene54329:CDS |
AACACGATCTTCTTCAGGGC+AGG | 0.482498 | 2.3:+69731876 | None:intergenic |
AATGCCCACCACAATGCATC+AGG | 0.482629 | 2.3:+69733918 | None:intergenic |
TCAGGAACCCTTCTCCGTAC+TGG | 0.487778 | 2.3:+69733936 | None:intergenic |
CATAATGGAGCTGCTGAGCC+TGG | 0.490002 | 2.3:+69732501 | None:intergenic |
GATCCATCGTGGCATGTACT+GGG | 0.492139 | 2.3:-69731516 | MS.gene54329:CDS |
TTCGAAGGCCAGTACGGAGA+AGG | 0.494054 | 2.3:-69733944 | MS.gene54329:CDS |
AGACTCAATTTGAGTCCCTC+TGG | 0.504318 | 2.3:+69733857 | None:intergenic |
AAATGCCCATCCGCATGCAT+CGG | 0.506827 | 2.3:+69731692 | None:intergenic |
TGTCCATGCTTAACCACTTG+AGG | 0.508743 | 2.3:-69731920 | MS.gene54329:CDS |
GAACCACGACGTCATCGTCC+AGG | 0.514466 | 2.3:+69731853 | None:intergenic |
CGATGACGTCGTGGTTCAGA+AGG | 0.515338 | 2.3:-69731847 | MS.gene54329:CDS |
GTCGGAACTTAACATCTCTT+CGG | 0.519106 | 2.3:+69732733 | None:intergenic |
CAATTTGCAAAAGAAATTGA+AGG | 0.524075 | 2.3:-69732309 | MS.gene54329:CDS |
TTGCCATGAATGACTTTCGT+GGG | 0.524242 | 2.3:-69732103 | MS.gene54329:CDS |
TTGATCCCGATGCATGCGGA+TGG | 0.524271 | 2.3:-69731698 | MS.gene54329:CDS |
CAGGAACACGATCTTCTTCA+GGG | 0.526754 | 2.3:+69731872 | None:intergenic |
TCAATCCCAATCTTCAACCA+AGG | 0.528594 | 2.3:+69731420 | None:intergenic |
AATAAATTATGCTTCGATGA+AGG | 0.529408 | 2.3:-69732132 | MS.gene54329:CDS |
AGAACACACAAAAGTGGTAA+AGG | 0.533513 | 2.3:+69732249 | None:intergenic |
GATCCTCAGTTGATAGAAAG+AGG | 0.537753 | 2.3:-69731474 | MS.gene54329:CDS |
TATGGCTTTATTGTTATACC+AGG | 0.538758 | 2.3:-69732519 | MS.gene54329:CDS |
TACATGCCACGATGGATCCA+AGG | 0.541821 | 2.3:+69731521 | None:intergenic |
TACAACAAAAGCTTTAGCTA+GGG | 0.546643 | 2.3:+69732679 | None:intergenic |
GTCTAGACCGCCTTTGTCCA+AGG | 0.549937 | 2.3:-69733838 | MS.gene54329:intron |
TCTTGAAGTTGCTTAAGCAC+AGG | 0.555450 | 2.3:+69732023 | None:intergenic |
TCGAAGGCCAGTACGGAGAA+GGG | 0.558622 | 2.3:-69733943 | MS.gene54329:CDS |
AGAAGTATGAAGACTTCTCA+TGG | 0.559312 | 2.3:-69732064 | MS.gene54329:CDS |
GCAATAAATACCTTGGACAA+AGG | 0.564738 | 2.3:+69733828 | None:intergenic |
TGGCATCTACCACTATTGGC+AGG | 0.567517 | 2.3:-69731622 | MS.gene54329:CDS |
ATAACAATAAAGCCATATCT+CGG | 0.568216 | 2.3:+69732525 | None:intergenic |
TGATCCCGATGCATGCGGAT+GGG | 0.570203 | 2.3:-69731697 | MS.gene54329:CDS |
TATCAGAGAACACACAAAAG+TGG | 0.570397 | 2.3:+69732243 | None:intergenic |
TCAATGGGAACTCCAAACCT+TGG | 0.574241 | 2.3:-69731437 | MS.gene54329:CDS |
AAACCTCAAGTGGTTAAGCA+TGG | 0.583737 | 2.3:+69731917 | None:intergenic |
ATCCTCAGTTGATAGAAAGA+GGG | 0.587849 | 2.3:-69731473 | MS.gene54329:CDS |
AGAGAAGAATCTGTGAATTG+CGG | 0.590485 | 2.3:+69732603 | None:intergenic |
CAGGGATATAAAACCTCAAG+TGG | 0.591983 | 2.3:+69731907 | None:intergenic |
GGCAGGAAAAGAATGTAGAT+CGG | 0.596579 | 2.3:-69731605 | MS.gene54329:CDS |
TTCAAAATATGGACAAATAG+CGG | 0.597495 | 2.3:-69732399 | MS.gene54329:CDS |
TTCTCTCAAATGCTGCCACT+AGG | 0.598229 | 2.3:-69732586 | MS.gene54329:CDS |
AGAATGTAGATCGGACATTG+TGG | 0.600112 | 2.3:-69731596 | MS.gene54329:CDS |
GGTTCCTGATGCATTGTGGT+GGG | 0.606322 | 2.3:-69733922 | MS.gene54329:CDS |
TTATCTATATTCTCACCAGA+GGG | 0.611948 | 2.3:-69733872 | MS.gene54329:CDS |
TGACTTTCGTGGGGTGACTG+TGG | 0.614040 | 2.3:-69732093 | MS.gene54329:CDS |
ATTGAAGGACAAAAGGCAAG+TGG | 0.619661 | 2.3:-69732294 | MS.gene54329:CDS |
AATTTATTTCATCAGTGACA+AGG | 0.620020 | 2.3:+69732147 | None:intergenic |
GATCGGACATTGTGGAAACT+CGG | 0.627650 | 2.3:-69731588 | MS.gene54329:CDS |
ACATGCCACGATGGATCCAA+GGG | 0.630341 | 2.3:+69731522 | None:intergenic |
TTTGCCATGAATGACTTTCG+TGG | 0.634111 | 2.3:-69732104 | MS.gene54329:CDS |
TTTATCTATATTCTCACCAG+AGG | 0.634229 | 2.3:-69733873 | MS.gene54329:CDS |
AAGTTGTCTGGTCACCGAGT+CGG | 0.637832 | 2.3:+69732715 | None:intergenic |
GGGTTCCTGATGCATTGTGG+TGG | 0.643605 | 2.3:-69733923 | MS.gene54329:CDS |
TCCTCAGTTGATAGAAAGAG+GGG | 0.645815 | 2.3:-69731472 | MS.gene54329:CDS |
CTTTCGTGGGGTGACTGTGG+AGG | 0.651957 | 2.3:-69732090 | MS.gene54329:CDS |
CATCATTGCAACTTCAGTCG+TGG | 0.652388 | 2.3:-69732219 | MS.gene54329:CDS |
ATAAATACCTTGGACAAAGG+CGG | 0.654401 | 2.3:+69733831 | None:intergenic |
ATTATGCTTCGATGAAGGCG+TGG | 0.658411 | 2.3:-69732127 | MS.gene54329:CDS |
TGCCATGAATGACTTTCGTG+GGG | 0.659273 | 2.3:-69732102 | MS.gene54329:CDS |
TGGAGCTGTTGAGACATGCA+TGG | 0.666652 | 2.3:-69731781 | MS.gene54329:CDS |
TAAAATGTTAATAATCCAGG+TGG | 0.669793 | 2.3:+69731558 | None:intergenic |
GTGTCCGGTTGACAACTGAA+TGG | 0.675940 | 2.3:-69732343 | MS.gene54329:CDS |
GAAGGGTTCCTGATGCATTG+TGG | 0.677895 | 2.3:-69733926 | MS.gene54329:CDS |
GCCCCTCTTTCTATCAACTG+AGG | 0.679282 | 2.3:+69731471 | None:intergenic |
AGAGATGTTAAGTTCCGACT+CGG | 0.681244 | 2.3:-69732729 | MS.gene54329:CDS |
GTTCCTGGACGATGACGTCG+TGG | 0.688675 | 2.3:-69731856 | MS.gene54329:CDS |
AAACCCAGTACATGCCACGA+TGG | 0.692978 | 2.3:+69731513 | None:intergenic |
TGTTAAAGGAGAACGCCTAG+TGG | 0.708696 | 2.3:+69732571 | None:intergenic |
CAGAACCCTTGGATCCATCG+TGG | 0.734059 | 2.3:-69731527 | MS.gene54329:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATATCTTCATTATTATT+GGG | - | chr2.3:69732468-69732487 | MS.gene54329:CDS | 10.0% |
!! | TATAATTTCATTTATAGTAT+TGG | - | chr2.3:69732340-69732359 | MS.gene54329:CDS | 10.0% |
!! | ATCATAAATGAAAAATGAAA+AGG | + | chr2.3:69731820-69731839 | None:intergenic | 15.0% |
!! | CATTATATCTTCATTATTAT+TGG | - | chr2.3:69732467-69732486 | MS.gene54329:CDS | 15.0% |
!! | TATGATTGAATAATCTTTAT+TGG | - | chr2.3:69731834-69731853 | MS.gene54329:CDS | 15.0% |
!! | TTACAAAAATAATAGGATTA+TGG | - | chr2.3:69732566-69732585 | MS.gene54329:CDS | 15.0% |
!! | TTATATCTTCATTATTATTG+GGG | - | chr2.3:69732469-69732488 | MS.gene54329:CDS | 15.0% |
!!! | TTTTTTCAATTGATTTGAAT+GGG | - | chr2.3:69733525-69733544 | MS.gene54329:intron | 15.0% |
!! | AAAAATAATAGGATTATGGA+AGG | - | chr2.3:69732570-69732589 | MS.gene54329:CDS | 20.0% |
!! | AATTTCATTTCTATTTGGAA+GGG | - | chr2.3:69731580-69731599 | MS.gene54329:CDS | 20.0% |
!! | AGAGAACTTACAAAAATAAT+AGG | - | chr2.3:69732559-69732578 | MS.gene54329:CDS | 20.0% |
!! | ATAGAAATGAAATTACTACA+TGG | + | chr2.3:69731574-69731593 | None:intergenic | 20.0% |
!! | GTAGTAATTTCATTTCTATT+TGG | - | chr2.3:69731575-69731594 | MS.gene54329:CDS | 20.0% |
!! | TAATTTCATTTCTATTTGGA+AGG | - | chr2.3:69731579-69731598 | MS.gene54329:CDS | 20.0% |
!! | TACATTAGAATATTTCCAAA+GGG | - | chr2.3:69731904-69731923 | MS.gene54329:CDS | 20.0% |
!! | TAGAAATGAAATTACTACAT+GGG | + | chr2.3:69731573-69731592 | None:intergenic | 20.0% |
!! | TATATCTTCATTATTATTGG+GGG | - | chr2.3:69732470-69732489 | MS.gene54329:CDS | 20.0% |
!!! | AATATCAATCAGAGTTTTAA+TGG | - | chr2.3:69731930-69731949 | MS.gene54329:CDS | 20.0% |
!!! | AGTTTTAATGGCTAATAATA+TGG | - | chr2.3:69731942-69731961 | MS.gene54329:CDS | 20.0% |
!!! | ATTAGTTTTTCTCTATAGTA+CGG | + | chr2.3:69732297-69732316 | None:intergenic | 20.0% |
!!! | CTTTTTTCAATTGATTTGAA+TGG | - | chr2.3:69733524-69733543 | MS.gene54329:intron | 20.0% |
! | AAAAGAAATTGAAGGACAAA+AGG | - | chr2.3:69733036-69733055 | MS.gene54329:intron | 25.0% |
! | AAGAAGTTATTAGCTAAACA+AGG | + | chr2.3:69732525-69732544 | None:intergenic | 25.0% |
! | AATAAATTATGCTTCGATGA+AGG | - | chr2.3:69733205-69733224 | MS.gene54329:intron | 25.0% |
! | AATTTATTTCATCAGTGACA+AGG | + | chr2.3:69733193-69733212 | None:intergenic | 25.0% |
! | AGTGAAAAGAGTTCAAAATA+TGG | - | chr2.3:69732927-69732946 | MS.gene54329:intron | 25.0% |
! | ATAACAATAAAGCCATATCT+CGG | + | chr2.3:69732815-69732834 | None:intergenic | 25.0% |
! | CAATTTGCAAAAGAAATTGA+AGG | - | chr2.3:69733028-69733047 | MS.gene54329:intron | 25.0% |
! | CCATAAAATGTTAATAATCC+AGG | + | chr2.3:69733785-69733804 | None:intergenic | 25.0% |
! | CTACATTAGAATATTTCCAA+AGG | - | chr2.3:69731903-69731922 | MS.gene54329:CDS | 25.0% |
! | GAGAATAGTTCAAGTATTTA+TGG | + | chr2.3:69733598-69733617 | None:intergenic | 25.0% |
! | TAAAATGTTAATAATCCAGG+TGG | + | chr2.3:69733782-69733801 | None:intergenic | 25.0% |
! | TCTGATTCTATAGTTGTTAA+AGG | + | chr2.3:69732783-69732802 | None:intergenic | 25.0% |
! | TTACAATCTCAACATTTAGT+TGG | - | chr2.3:69731680-69731699 | MS.gene54329:CDS | 25.0% |
! | TTCAAAATATGGACAAATAG+CGG | - | chr2.3:69732938-69732957 | MS.gene54329:intron | 25.0% |
!! | AAATTCTAAAAATCCCAACA+TGG | - | chr2.3:69733157-69733176 | MS.gene54329:intron | 25.0% |
!! | AATCAATATGTTTTTCCCAT+AGG | + | chr2.3:69733955-69733974 | None:intergenic | 25.0% |
!! | ATCAATATGTTTTTCCCATA+GGG | + | chr2.3:69733954-69733973 | None:intergenic | 25.0% |
!! | ATTGGTAAATGTTTTGCAAT+AGG | - | chr2.3:69732211-69732230 | MS.gene54329:CDS | 25.0% |
!! | CAAGTTTTTAATACATCACA+TGG | - | chr2.3:69732147-69732166 | MS.gene54329:CDS | 25.0% |
!! | CCTGGATTATTAACATTTTA+TGG | - | chr2.3:69733782-69733801 | MS.gene54329:intron | 25.0% |
!! | CTTAAACTTGCTTAAGTAAT+TGG | - | chr2.3:69732398-69732417 | MS.gene54329:CDS | 25.0% |
!! | TCAATTTCTTTTGCAAATTG+AGG | + | chr2.3:69733028-69733047 | None:intergenic | 25.0% |
!!! | ATGTTTTTGATTTGGTTGAA+TGG | - | chr2.3:69733675-69733694 | MS.gene54329:intron | 25.0% |
!!! | TTGGAAATTCATTTTGTTTC+CGG | - | chr2.3:69731761-69731780 | MS.gene54329:CDS | 25.0% |
AAAACTTGCAAAGTGTAAGT+TGG | + | chr2.3:69732135-69732154 | None:intergenic | 30.0% | |
ACATCTCTTCGGTAATATTA+AGG | + | chr2.3:69732596-69732615 | None:intergenic | 30.0% | |
ATATATAGTCAACTAGCACA+TGG | + | chr2.3:69731796-69731815 | None:intergenic | 30.0% | |
CTGATTGATATTATACCCTT+TGG | + | chr2.3:69731922-69731941 | None:intergenic | 30.0% | |
CTTTATTGGATAGAAACAAC+TGG | - | chr2.3:69731848-69731867 | MS.gene54329:CDS | 30.0% | |
GATTTGAATGGGAATGTTAA+TGG | - | chr2.3:69733536-69733555 | MS.gene54329:intron | 30.0% | |
GGAAAAAGCAATAAATACCT+TGG | + | chr2.3:69731519-69731538 | None:intergenic | 30.0% | |
TAAGCATGGACAGATATTTA+GGG | + | chr2.3:69733409-69733428 | None:intergenic | 30.0% | |
TCAAAATGAGCTCTTATAAG+AGG | + | chr2.3:69733623-69733642 | None:intergenic | 30.0% | |
TCAACTCAATAAGTTAGGAT+AGG | - | chr2.3:69731642-69731661 | MS.gene54329:CDS | 30.0% | |
TCAATAAGTTAGGATAGGAT+AGG | - | chr2.3:69731647-69731666 | MS.gene54329:CDS | 30.0% | |
TCACTTCAACTCAATAAGTT+AGG | - | chr2.3:69731637-69731656 | MS.gene54329:CDS | 30.0% | |
TTAAGCATGGACAGATATTT+AGG | + | chr2.3:69733410-69733429 | None:intergenic | 30.0% | |
TTATCTATATTCTCACCAGA+GGG | - | chr2.3:69731465-69731484 | MS.gene54329:CDS | 30.0% | |
TTTATCTATATTCTCACCAG+AGG | - | chr2.3:69731464-69731483 | MS.gene54329:CDS | 30.0% | |
! | CAATTATATGAAGAGCGTAT+TGG | - | chr2.3:69732193-69732212 | MS.gene54329:CDS | 30.0% |
! | TAACAATCTCCAATTTGCTT+GGG | - | chr2.3:69732695-69732714 | MS.gene54329:CDS | 30.0% |
! | TACAACAAAAGCTTTAGCTA+GGG | + | chr2.3:69732661-69732680 | None:intergenic | 30.0% |
! | TATCTGATCATTAAGTTGTC+TGG | + | chr2.3:69732637-69732656 | None:intergenic | 30.0% |
! | TCAATATGTTTTTCCCATAG+GGG | + | chr2.3:69733953-69733972 | None:intergenic | 30.0% |
! | TTACAACAAAAGCTTTAGCT+AGG | + | chr2.3:69732662-69732681 | None:intergenic | 30.0% |
!! | AATTTTCAAGAAGAGAGATC+TGG | + | chr2.3:69731540-69731559 | None:intergenic | 30.0% |
!! | ATACAAAGCTACTACTTTTC+CGG | - | chr2.3:69733344-69733363 | MS.gene54329:intron | 30.0% |
!! | ATGTTTTAAATCCCTATTGC+GGG | - | chr2.3:69731989-69732008 | MS.gene54329:CDS | 30.0% |
!! | GATGTTTTAAATCCCTATTG+CGG | - | chr2.3:69731988-69732007 | MS.gene54329:CDS | 30.0% |
!! | TATGGCTTTATTGTTATACC+AGG | - | chr2.3:69732818-69732837 | MS.gene54329:intron | 30.0% |
!! | TGGGATGAATGTTTTTGATT+TGG | - | chr2.3:69733667-69733686 | MS.gene54329:intron | 30.0% |
!!! | TTTTTGATTTGGTTGAATGG+AGG | - | chr2.3:69733678-69733697 | MS.gene54329:intron | 30.0% |
AAAGTTGCATTGCTGCAATA+AGG | + | chr2.3:69733987-69734006 | None:intergenic | 35.0% | |
AAGGTGAAAAACAACCATGT+TGG | + | chr2.3:69733174-69733193 | None:intergenic | 35.0% | |
AATTGACTAGACTAAACAGC+TGG | - | chr2.3:69731605-69731624 | MS.gene54329:CDS | 35.0% | |
ACCAAAAAGCTTATACTGTC+TGG | - | chr2.3:69732971-69732990 | MS.gene54329:intron | 35.0% | |
AGAACACACAAAAGTGGTAA+AGG | + | chr2.3:69733091-69733110 | None:intergenic | 35.0% | |
AGAGAAGAATCTGTGAATTG+CGG | + | chr2.3:69732737-69732756 | None:intergenic | 35.0% | |
AGCAATGCAACTTTCATTGA+GGG | - | chr2.3:69733993-69734012 | MS.gene54329:CDS | 35.0% | |
AGGTGAAAAACAACCATGTT+GGG | + | chr2.3:69733173-69733192 | None:intergenic | 35.0% | |
ATAAATACCTTGGACAAAGG+CGG | + | chr2.3:69731509-69731528 | None:intergenic | 35.0% | |
ATAGTATGCTGAGATGATCT+TGG | - | chr2.3:69731742-69731761 | MS.gene54329:CDS | 35.0% | |
CCAAAAAGCTTATACTGTCT+GGG | - | chr2.3:69732972-69732991 | MS.gene54329:intron | 35.0% | |
GCAATAAATACCTTGGACAA+AGG | + | chr2.3:69731512-69731531 | None:intergenic | 35.0% | |
TAGCACATGGTACATAATTC+CGG | + | chr2.3:69731783-69731802 | None:intergenic | 35.0% | |
TATCAGAGAACACACAAAAG+TGG | + | chr2.3:69733097-69733116 | None:intergenic | 35.0% | |
TCATAGTTGCACTGTCATAA+TGG | + | chr2.3:69732854-69732873 | None:intergenic | 35.0% | |
TCATTATTATTGGGGGATAG+AGG | - | chr2.3:69732477-69732496 | MS.gene54329:CDS | 35.0% | |
TGAAAAATACAAGCCCCTAT+GGG | - | chr2.3:69733937-69733956 | MS.gene54329:CDS | 35.0% | |
TGGAGGAAAAAGAATGTAAC+TGG | - | chr2.3:69733695-69733714 | MS.gene54329:intron | 35.0% | |
TTAGGGTTACGAAACTTGAT+AGG | + | chr2.3:69733392-69733411 | None:intergenic | 35.0% | |
TTGAAAAATACAAGCCCCTA+TGG | - | chr2.3:69733936-69733955 | MS.gene54329:CDS | 35.0% | |
! | AGAAGTATGAAGACTTCTCA+TGG | - | chr2.3:69733273-69733292 | MS.gene54329:intron | 35.0% |
! | GGGATTTAAAACATCTGATC+TGG | + | chr2.3:69731983-69732002 | None:intergenic | 35.0% |
! | GTAACAATCTCCAATTTGCT+TGG | - | chr2.3:69732694-69732713 | MS.gene54329:CDS | 35.0% |
! | TAATTGGAACATAGCTTGCA+TGG | - | chr2.3:69732414-69732433 | MS.gene54329:CDS | 35.0% |
!! | ATCCTCAGTTGATAGAAAGA+GGG | - | chr2.3:69733864-69733883 | MS.gene54329:CDS | 35.0% |
!! | TGTTTTAAATCCCTATTGCG+GGG | - | chr2.3:69731990-69732009 | MS.gene54329:CDS | 35.0% |
AAACCTCAAGTGGTTAAGCA+TGG | + | chr2.3:69733423-69733442 | None:intergenic | 40.0% | |
ACTTGCAACAAGAGAACACA+TGG | + | chr2.3:69732253-69732272 | None:intergenic | 40.0% | |
AGAATGTAGATCGGACATTG+TGG | - | chr2.3:69733741-69733760 | MS.gene54329:intron | 40.0% | |
AGAGATGTTAAGTTCCGACT+CGG | - | chr2.3:69732608-69732627 | MS.gene54329:CDS | 40.0% | |
ATTGAAGGACAAAAGGCAAG+TGG | - | chr2.3:69733043-69733062 | MS.gene54329:intron | 40.0% | |
CACTTAGTTCCCAAGCAAAT+TGG | + | chr2.3:69732707-69732726 | None:intergenic | 40.0% | |
CAGCAATGCAACTTTCATTG+AGG | - | chr2.3:69733992-69734011 | MS.gene54329:CDS | 40.0% | |
CAGGGATATAAAACCTCAAG+TGG | + | chr2.3:69733433-69733452 | None:intergenic | 40.0% | |
CCAAACCTTGGTTGAAGATT+GGG | - | chr2.3:69733912-69733931 | MS.gene54329:CDS | 40.0% | |
CTCTTGTTGCAAGTTATGTC+AGG | - | chr2.3:69732259-69732278 | MS.gene54329:CDS | 40.0% | |
GAAATCGAACCTGAAACCTT+GGG | - | chr2.3:69732073-69732092 | MS.gene54329:CDS | 40.0% | |
GCAAGTGGAGATGAAGATTA+AGG | - | chr2.3:69733058-69733077 | MS.gene54329:intron | 40.0% | |
GGCAGGAAAAGAATGTAGAT+CGG | - | chr2.3:69733732-69733751 | MS.gene54329:intron | 40.0% | |
GTCGGAACTTAACATCTCTT+CGG | + | chr2.3:69732607-69732626 | None:intergenic | 40.0% | |
TAACTGGCATCTACCACTAT+TGG | - | chr2.3:69733711-69733730 | MS.gene54329:intron | 40.0% | |
TCAATCCCAATCTTCAACCA+AGG | + | chr2.3:69733920-69733939 | None:intergenic | 40.0% | |
TCATCTGTTCTTCAAGAGCT+TGG | + | chr2.3:69732899-69732918 | None:intergenic | 40.0% | |
TCCAAACCTTGGTTGAAGAT+TGG | - | chr2.3:69733911-69733930 | MS.gene54329:CDS | 40.0% | |
TCTTGAAGTTGCTTAAGCAC+AGG | + | chr2.3:69733317-69733336 | None:intergenic | 40.0% | |
TGAACCATTCAGTTGTCAAC+CGG | + | chr2.3:69733001-69733020 | None:intergenic | 40.0% | |
TGTGAGAGATGTGAGTTCAA+TGG | - | chr2.3:69731876-69731895 | MS.gene54329:CDS | 40.0% | |
TTGCCATGAATGACTTTCGT+GGG | - | chr2.3:69733234-69733253 | MS.gene54329:intron | 40.0% | |
TTTGCCATGAATGACTTTCG+TGG | - | chr2.3:69733233-69733252 | MS.gene54329:intron | 40.0% | |
! | CATTCTTTTCCTGCCAATAG+TGG | + | chr2.3:69733727-69733746 | None:intergenic | 40.0% |
! | CCCAGACAGTATAAGCTTTT+TGG | + | chr2.3:69732975-69732994 | None:intergenic | 40.0% |
! | GTAGAGCAACAGATTTTCGA+AGG | - | chr2.3:69731378-69731397 | MS.gene54329:CDS | 40.0% |
! | TACTTTTCCGGAAACAGTGA+TGG | - | chr2.3:69733356-69733375 | MS.gene54329:intron | 40.0% |
! | TTATGGACTAACAGAACCCT+TGG | - | chr2.3:69733799-69733818 | MS.gene54329:intron | 40.0% |
! | TTTTAAATCCCTATTGCGGG+GGG | - | chr2.3:69731992-69732011 | MS.gene54329:CDS | 40.0% |
!! | AGCTTTGCTCTGGCTTTAAA+TGG | + | chr2.3:69732019-69732038 | None:intergenic | 40.0% |
!! | GATCCTCAGTTGATAGAAAG+AGG | - | chr2.3:69733863-69733882 | MS.gene54329:CDS | 40.0% |
!! | GCTTTGCTCTGGCTTTAAAT+GGG | + | chr2.3:69732018-69732037 | None:intergenic | 40.0% |
!! | GTTTTAAATCCCTATTGCGG+GGG | - | chr2.3:69731991-69732010 | MS.gene54329:CDS | 40.0% |
!! | TCCTCAGTTGATAGAAAGAG+GGG | - | chr2.3:69733865-69733884 | MS.gene54329:CDS | 40.0% |
!!! | ATTGGGGGTTTTGGAAAATG+AGG | - | chr2.3:69731354-69731373 | MS.gene54329:CDS | 40.0% |
AAGATTCCAAGCCAACCACT+AGG | - | chr2.3:69732109-69732128 | MS.gene54329:CDS | 45.0% | |
AGACAGTGCTATCCGAGATA+TGG | - | chr2.3:69732800-69732819 | MS.gene54329:intron | 45.0% | |
AGACTCAATTTGAGTCCCTC+TGG | + | chr2.3:69731483-69731502 | None:intergenic | 45.0% | |
ATTATGCTTCGATGAAGGCG+TGG | - | chr2.3:69733210-69733229 | MS.gene54329:intron | 45.0% | |
ATTATTGGGGGATAGAGGTG+CGG | - | chr2.3:69732482-69732501 | MS.gene54329:CDS | 45.0% | |
CAGGAACACGATCTTCTTCA+GGG | + | chr2.3:69733468-69733487 | None:intergenic | 45.0% | |
CATCATTGCAACTTCAGTCG+TGG | - | chr2.3:69733118-69733137 | MS.gene54329:intron | 45.0% | |
CCCAATCTTCAACCAAGGTT+TGG | + | chr2.3:69733915-69733934 | None:intergenic | 45.0% | |
CTTTCCACCATCACTGTTTC+CGG | + | chr2.3:69733366-69733385 | None:intergenic | 45.0% | |
GATCGGACATTGTGGAAACT+CGG | - | chr2.3:69733749-69733768 | MS.gene54329:intron | 45.0% | |
GGAAATCGAACCTGAAACCT+TGG | - | chr2.3:69732072-69732091 | MS.gene54329:CDS | 45.0% | |
GTCCATACAAAGCTTTGCTC+TGG | + | chr2.3:69732029-69732048 | None:intergenic | 45.0% | |
TCAATGGGAACTCCAAACCT+TGG | - | chr2.3:69733900-69733919 | MS.gene54329:CDS | 45.0% | |
TCAGGGCAGGAAAAACTTCA+GGG | + | chr2.3:69733451-69733470 | None:intergenic | 45.0% | |
TGCCATGAATGACTTTCGTG+GGG | - | chr2.3:69733235-69733254 | MS.gene54329:intron | 45.0% | |
TGTCCATGCTTAACCACTTG+AGG | - | chr2.3:69733417-69733436 | MS.gene54329:intron | 45.0% | |
TGTTAAAGGAGAACGCCTAG+TGG | + | chr2.3:69732769-69732788 | None:intergenic | 45.0% | |
TTCAGGGCAGGAAAAACTTC+AGG | + | chr2.3:69733452-69733471 | None:intergenic | 45.0% | |
TTCTCTCAAATGCTGCCACT+AGG | - | chr2.3:69732751-69732770 | MS.gene54329:CDS | 45.0% | |
! | AGCCAGAGCAAAGCTTTGTA+TGG | - | chr2.3:69732024-69732043 | MS.gene54329:CDS | 45.0% |
! | CAAAGTGTAAGTTGGCCTAG+TGG | + | chr2.3:69732127-69732146 | None:intergenic | 45.0% |
! | CAGATTTTCGAAGGCCAGTA+CGG | - | chr2.3:69731387-69731406 | MS.gene54329:CDS | 45.0% |
! | TTTTCCGGAAACAGTGATGG+TGG | - | chr2.3:69733359-69733378 | MS.gene54329:intron | 45.0% |
!! | CATTTTGATCCCGATGCATG+CGG | - | chr2.3:69733635-69733654 | MS.gene54329:intron | 45.0% |
!! | TAGTGGTTGGCTTGGAATCT+TGG | + | chr2.3:69732110-69732129 | None:intergenic | 45.0% |
!! | ATAAAGAAAAATTATATTTA+GGG | + | chr2.3:69732323-69732342 | None:intergenic | 5.0% |
!! | TATAAAGAAAAATTATATTT+AGG | + | chr2.3:69732324-69732343 | None:intergenic | 5.0% |
AAACCCAGTACATGCCACGA+TGG | + | chr2.3:69733827-69733846 | None:intergenic | 50.0% | |
AAATGCCCATCCGCATGCAT+CGG | + | chr2.3:69733648-69733667 | None:intergenic | 50.0% | |
AACACGATCTTCTTCAGGGC+AGG | + | chr2.3:69733464-69733483 | None:intergenic | 50.0% | |
AAGTTGTCTGGTCACCGAGT+CGG | + | chr2.3:69732625-69732644 | None:intergenic | 50.0% | |
AATGCCCACCACAATGCATC+AGG | + | chr2.3:69731422-69731441 | None:intergenic | 50.0% | |
ACATGCCACGATGGATCCAA+GGG | + | chr2.3:69733818-69733837 | None:intergenic | 50.0% | |
ATCGAACCTGAAACCTTGGG+AGG | - | chr2.3:69732076-69732095 | MS.gene54329:CDS | 50.0% | |
ATGCATGCGGATGGGCATTT+GGG | - | chr2.3:69733648-69733667 | MS.gene54329:intron | 50.0% | |
CACCCCACGAAAGTCATTCA+TGG | + | chr2.3:69733240-69733259 | None:intergenic | 50.0% | |
CCAGGAACACGATCTTCTTC+AGG | + | chr2.3:69733469-69733488 | None:intergenic | 50.0% | |
CCTGAAGAAGATCGTGTTCC+TGG | - | chr2.3:69733466-69733485 | MS.gene54329:intron | 50.0% | |
GAAGGGTTCCTGATGCATTG+TGG | - | chr2.3:69731411-69731430 | MS.gene54329:CDS | 50.0% | |
GATCCATCGTGGCATGTACT+GGG | - | chr2.3:69733821-69733840 | MS.gene54329:intron | 50.0% | |
GCCCCTCTTTCTATCAACTG+AGG | + | chr2.3:69733869-69733888 | None:intergenic | 50.0% | |
GCTTATACTGTCTGGGTGTC+CGG | - | chr2.3:69732979-69732998 | MS.gene54329:intron | 50.0% | |
GGGCTGTACTGCACTTCAAT+GGG | - | chr2.3:69733885-69733904 | MS.gene54329:CDS | 50.0% | |
GGTTCCTGATGCATTGTGGT+GGG | - | chr2.3:69731415-69731434 | MS.gene54329:CDS | 50.0% | |
GTGTCCGGTTGACAACTGAA+TGG | - | chr2.3:69732994-69733013 | MS.gene54329:intron | 50.0% | |
TACATGCCACGATGGATCCA+AGG | + | chr2.3:69733819-69733838 | None:intergenic | 50.0% | |
TGGAGCTGTTGAGACATGCA+TGG | - | chr2.3:69733556-69733575 | MS.gene54329:intron | 50.0% | |
TGGCATCTACCACTATTGGC+AGG | - | chr2.3:69733715-69733734 | MS.gene54329:intron | 50.0% | |
! | GATTTCCCCGGTGCCAATTT+CGG | + | chr2.3:69732059-69732078 | None:intergenic | 50.0% |
! | GTGTAAGTTGGCCTAGTGGT+TGG | + | chr2.3:69732123-69732142 | None:intergenic | 50.0% |
! | TCGTGGCATGTACTGGGTTT+TGG | - | chr2.3:69733827-69733846 | MS.gene54329:intron | 50.0% |
!! | GGTTTCAGGTTCGATTTCCC+CGG | + | chr2.3:69732071-69732090 | None:intergenic | 50.0% |
AAACTCGGCACTTTGCCACC+TGG | - | chr2.3:69733764-69733783 | MS.gene54329:intron | 55.0% | |
AATGCCCATCCGCATGCATC+GGG | + | chr2.3:69733647-69733666 | None:intergenic | 55.0% | |
ATGGACTTGCCCGCCGAAAT+TGG | - | chr2.3:69732043-69732062 | MS.gene54329:CDS | 55.0% | |
CAGAACCCTTGGATCCATCG+TGG | - | chr2.3:69733810-69733829 | MS.gene54329:intron | 55.0% | |
CGATGACGTCGTGGTTCAGA+AGG | - | chr2.3:69733490-69733509 | MS.gene54329:intron | 55.0% | |
GATGCATGCGGATGGGCATT+TGG | - | chr2.3:69733647-69733666 | MS.gene54329:intron | 55.0% | |
GGATCCATCGTGGCATGTAC+TGG | - | chr2.3:69733820-69733839 | MS.gene54329:intron | 55.0% | |
GGGGCTGTACTGCACTTCAA+TGG | - | chr2.3:69733884-69733903 | MS.gene54329:CDS | 55.0% | |
GGGTTCCTGATGCATTGTGG+TGG | - | chr2.3:69731414-69731433 | MS.gene54329:CDS | 55.0% | |
GTCTAGACCGCCTTTGTCCA+AGG | - | chr2.3:69731499-69731518 | MS.gene54329:CDS | 55.0% | |
TAAATGGGCCCCCCGCAATA+GGG | + | chr2.3:69732003-69732022 | None:intergenic | 55.0% | |
TCAGGAACCCTTCTCCGTAC+TGG | + | chr2.3:69731404-69731423 | None:intergenic | 55.0% | |
TCGAAGGCCAGTACGGAGAA+GGG | - | chr2.3:69731394-69731413 | MS.gene54329:CDS | 55.0% | |
TGACTTTCGTGGGGTGACTG+TGG | - | chr2.3:69733244-69733263 | MS.gene54329:intron | 55.0% | |
TGATCCCGATGCATGCGGAT+GGG | - | chr2.3:69733640-69733659 | MS.gene54329:intron | 55.0% | |
TGTGCTCCTCCCAAGGTTTC+AGG | + | chr2.3:69732085-69732104 | None:intergenic | 55.0% | |
TTAAATGGGCCCCCCGCAAT+AGG | + | chr2.3:69732004-69732023 | None:intergenic | 55.0% | |
TTCGAAGGCCAGTACGGAGA+AGG | - | chr2.3:69731393-69731412 | MS.gene54329:CDS | 55.0% | |
TTGATCCCGATGCATGCGGA+TGG | - | chr2.3:69733639-69733658 | MS.gene54329:intron | 55.0% | |
! | AGGTGCGGTGATGGTGAGTT+TGG | - | chr2.3:69732497-69732516 | MS.gene54329:CDS | 55.0% |
! | AGTTGGCCTAGTGGTTGGCT+TGG | + | chr2.3:69732118-69732137 | None:intergenic | 55.0% |
! | CATAATGGAGCTGCTGAGCC+TGG | + | chr2.3:69732839-69732858 | None:intergenic | 55.0% |
! | GGTGCGGTGATGGTGAGTTT+GGG | - | chr2.3:69732498-69732517 | MS.gene54329:CDS | 55.0% |
CTTGGAGTGTGCTCCTCCCA+AGG | + | chr2.3:69732092-69732111 | None:intergenic | 60.0% | |
CTTTCGTGGGGTGACTGTGG+AGG | - | chr2.3:69733247-69733266 | MS.gene54329:intron | 60.0% | |
GAACCACGACGTCATCGTCC+AGG | + | chr2.3:69733487-69733506 | None:intergenic | 60.0% | |
GTTCCTGGACGATGACGTCG+TGG | - | chr2.3:69733481-69733500 | MS.gene54329:intron | 60.0% | |
TTGCCCGCCGAAATTGGCAC+CGG | - | chr2.3:69732049-69732068 | MS.gene54329:CDS | 60.0% | |
! | TTCCCCGGTGCCAATTTCGG+CGG | + | chr2.3:69732056-69732075 | None:intergenic | 60.0% |
TGCCCGCCGAAATTGGCACC+GGG | - | chr2.3:69732050-69732069 | MS.gene54329:CDS | 65.0% | |
! | GGGGGATAGAGGTGCGGTGA+TGG | - | chr2.3:69732488-69732507 | MS.gene54329:CDS | 65.0% |
! | TCCCCGGTGCCAATTTCGGC+GGG | + | chr2.3:69732055-69732074 | None:intergenic | 65.0% |
GCCCGCCGAAATTGGCACCG+GGG | - | chr2.3:69732051-69732070 | MS.gene54329:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 69731347 | 69734012 | 69731347 | ID=MS.gene54329 |
chr2.3 | mRNA | 69731347 | 69734012 | 69731347 | ID=MS.gene54329.t1;Parent=MS.gene54329 |
chr2.3 | exon | 69733839 | 69734012 | 69733839 | ID=MS.gene54329.t1.exon1;Parent=MS.gene54329.t1 |
chr2.3 | CDS | 69733839 | 69734012 | 69733839 | ID=cds.MS.gene54329.t1;Parent=MS.gene54329.t1 |
chr2.3 | exon | 69731347 | 69732798 | 69731347 | ID=MS.gene54329.t1.exon2;Parent=MS.gene54329.t1 |
chr2.3 | CDS | 69731347 | 69732798 | 69731347 | ID=cds.MS.gene54329.t1;Parent=MS.gene54329.t1 |
Gene Sequence |
Protein sequence |