Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54652.t1 | XP_013450839.1 | 66.9 | 562 | 8 | 1 | 1 | 384 | 1 | 562 | 6.00E-191 | 676.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54652.t1 | Q8VZ10 | 31.8 | 157 | 90 | 6 | 87 | 234 | 740 | 888 | 1.4e-07 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54652.t1 | A0A072U590 | 66.9 | 562 | 8 | 1 | 1 | 384 | 1 | 562 | 4.3e-191 | 676.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058909 | MS.gene54652 | 0.821502 | 3.90E-53 | -1.69E-46 |
| MS.gene058912 | MS.gene54652 | 0.812436 | 4.24E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54652.t1 | MTR_6g007720 | 97.668 | 343 | 8 | 0 | 1 | 343 | 1 | 343 | 0.0 | 686 |
| MS.gene54652.t1 | MTR_6g007720 | 100.000 | 41 | 0 | 0 | 344 | 384 | 522 | 562 | 8.02e-21 | 94.7 |
| MS.gene54652.t1 | MTR_8g063760 | 61.012 | 336 | 112 | 6 | 12 | 345 | 19 | 337 | 2.77e-133 | 392 |
| MS.gene54652.t1 | MTR_5g034750 | 60.000 | 330 | 113 | 4 | 22 | 345 | 19 | 335 | 3.18e-132 | 390 |
| MS.gene54652.t1 | MTR_2g075860 | 43.408 | 311 | 146 | 8 | 7 | 311 | 10 | 296 | 3.69e-75 | 241 |
| MS.gene54652.t1 | MTR_8g058630 | 59.677 | 124 | 48 | 1 | 120 | 243 | 13 | 134 | 3.18e-47 | 158 |
| MS.gene54652.t1 | MTR_5g034550 | 50.000 | 166 | 54 | 3 | 119 | 273 | 2 | 149 | 1.97e-42 | 145 |
| MS.gene54652.t1 | MTR_8g063700 | 41.111 | 180 | 101 | 3 | 65 | 243 | 26 | 201 | 1.67e-33 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54652.t1 | AT1G70280 | 61.755 | 319 | 101 | 5 | 28 | 345 | 28 | 326 | 8.40e-126 | 372 |
| MS.gene54652.t1 | AT1G23880 | 56.716 | 335 | 125 | 6 | 7 | 339 | 65 | 381 | 1.23e-119 | 357 |
| MS.gene54652.t1 | AT5G14890 | 55.685 | 343 | 131 | 8 | 19 | 354 | 21 | 349 | 1.07e-118 | 353 |
| MS.gene54652.t1 | AT1G70280 | 63.345 | 281 | 85 | 4 | 66 | 345 | 1 | 264 | 1.58e-114 | 341 |
| MS.gene54652.t1 | AT1G23880 | 60.584 | 274 | 91 | 4 | 66 | 339 | 1 | 257 | 2.25e-105 | 317 |
| MS.gene54652.t1 | AT3G14860 | 44.755 | 286 | 136 | 6 | 1 | 284 | 13 | 278 | 1.89e-74 | 239 |
| MS.gene54652.t1 | AT3G14860 | 44.755 | 286 | 136 | 6 | 1 | 284 | 13 | 278 | 2.60e-74 | 239 |
| MS.gene54652.t1 | AT1G23890 | 43.478 | 184 | 98 | 4 | 67 | 248 | 23 | 202 | 2.88e-41 | 146 |
| MS.gene54652.t1 | AT1G23890 | 42.935 | 184 | 99 | 4 | 67 | 248 | 23 | 202 | 5.21e-40 | 146 |
Find 81 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCCAGATGGTGAATATT+TGG | 0.159273 | 6.1:+3348010 | MS.gene54652:CDS |
| ATATTATGGTGACTAAATTT+TGG | 0.166848 | 6.1:-3351577 | None:intergenic |
| TTGTTTCTTCTCTTCTTAAA+TGG | 0.172191 | 6.1:+3347633 | MS.gene54652:CDS |
| TCATCTTCATTAGGGATTAA+AGG | 0.208414 | 6.1:-3350887 | None:intergenic |
| AAAGGAGGCCTAACTGATTT+AGG | 0.228168 | 6.1:-3350869 | None:intergenic |
| CATTGCAGACACATTGAATA+TGG | 0.250525 | 6.1:+3349412 | MS.gene54652:CDS |
| CTACCTGGTACTTTAACTTT+TGG | 0.252864 | 6.1:-3347677 | None:intergenic |
| GAAGATCCAGCAAGCAGTTT+TGG | 0.261360 | 6.1:-3349296 | None:intergenic |
| TCATCAACTGTAAGCCCTTT+AGG | 0.275718 | 6.1:-3349374 | None:intergenic |
| CATCAACATGGCCTCCTAAT+TGG | 0.286978 | 6.1:-3350072 | None:intergenic |
| TAGAAGTAGTTGCTCTCTTT+TGG | 0.288214 | 6.1:+3350144 | MS.gene54652:CDS |
| CTTCTCTTCTTAAATGGATA+TGG | 0.289356 | 6.1:+3347639 | MS.gene54652:CDS |
| TTAACCTAGGACGAATATTA+TGG | 0.294288 | 6.1:-3351591 | None:intergenic |
| AGATGGTGAATATTTGGTTT+TGG | 0.301551 | 6.1:+3348016 | MS.gene54652:CDS |
| TCTCAAATTCATCTTCATTA+GGG | 0.302840 | 6.1:-3350895 | None:intergenic |
| TTCTCAAATTCATCTTCATT+AGG | 0.311852 | 6.1:-3350896 | None:intergenic |
| GGATCTTCTGAGGGGTATAT+TGG | 0.321417 | 6.1:+3349311 | MS.gene54652:CDS |
| AATGTGGAAACAATATTTGA+TGG | 0.330878 | 6.1:+3347951 | MS.gene54652:CDS |
| AGGATTCAAGGGCACATATA+AGG | 0.336115 | 6.1:+3350807 | MS.gene54652:intron |
| GTGATAAAGGCTGTGGATTA+TGG | 0.344089 | 6.1:+3351550 | MS.gene54652:CDS |
| GAAGGCTTCTTTGTTTCTCT+TGG | 0.356177 | 6.1:+3350926 | MS.gene54652:CDS |
| ATAGCTGCTCTTGTTTCTGC+TGG | 0.364729 | 6.1:+3350396 | MS.gene54652:CDS |
| TTCATCACTGATCTTTCTAA+TGG | 0.373047 | 6.1:-3349435 | None:intergenic |
| ACGTGAGGCTATGGTGATAA+AGG | 0.389534 | 6.1:+3351537 | MS.gene54652:CDS |
| AGTGAACTCAAGTTCATCAA+TGG | 0.414203 | 6.1:+3350958 | MS.gene54652:CDS |
| ATATGTTAGCATTACTTAAG+AGG | 0.422314 | 6.1:+3350430 | MS.gene54652:CDS |
| AAAACCAAATATTCACCATC+TGG | 0.435104 | 6.1:-3348014 | None:intergenic |
| TGACATGCAGAAATTGTTAC+TGG | 0.436787 | 6.1:+3347596 | MS.gene54652:intron |
| AGCAAACCAAAACTGCTTGC+TGG | 0.444843 | 6.1:+3349290 | MS.gene54652:CDS |
| GGGTATATTGGACACATAGA+TGG | 0.445127 | 6.1:+3349323 | MS.gene54652:CDS |
| GAAAACTTTGCATCCTCACT+TGG | 0.448935 | 6.1:-3350097 | None:intergenic |
| CGTCCTAGGTTAAATTATGT+TGG | 0.467022 | 6.1:+3351601 | MS.gene54652:CDS |
| CAATTAGGAGGCCATGTTGA+TGG | 0.476101 | 6.1:+3350073 | MS.gene54652:CDS |
| ATAGGGGTAACAACCATTGC+AGG | 0.479173 | 6.1:+3350034 | MS.gene54652:intron |
| GTGAACTCAAGTTCATCAAT+GGG | 0.484957 | 6.1:+3350959 | MS.gene54652:CDS |
| TGGTTCAGTCTTGCATCTCT+AGG | 0.485332 | 6.1:-3349350 | None:intergenic |
| ATATTTGATGGACGTAAGCT+TGG | 0.486395 | 6.1:+3347963 | MS.gene54652:CDS |
| AGGGCACATATAAGGACAAA+AGG | 0.486828 | 6.1:+3350815 | MS.gene54652:CDS |
| TATGACAATAGTTTCCCCTT+AGG | 0.487484 | 6.1:+3350259 | MS.gene54652:CDS |
| GGAAATTTACATCTTGACAT+TGG | 0.502050 | 6.1:-3348074 | None:intergenic |
| GTCACCATAATATTCGTCCT+AGG | 0.509555 | 6.1:+3351587 | MS.gene54652:CDS |
| CAAGACTGAACCATCCTAAA+GGG | 0.514153 | 6.1:+3349360 | MS.gene54652:CDS |
| TTTCACTTACTTGCAGGTGG+TGG | 0.525688 | 6.1:-3347504 | None:intergenic |
| GGTGGTGGTGTAGCTGAAGT+TGG | 0.538593 | 6.1:-3347489 | None:intergenic |
| GCAAGACTGAACCATCCTAA+AGG | 0.538732 | 6.1:+3349359 | MS.gene54652:CDS |
| GGCCTAACTGATTTAGGAGG+AGG | 0.539849 | 6.1:-3350863 | None:intergenic |
| GGCCTCCTCCTAAATCAGTT+AGG | 0.542090 | 6.1:+3350861 | MS.gene54652:CDS |
| ATTAGAAAGATCAGTGATGA+AGG | 0.542470 | 6.1:+3349437 | MS.gene54652:CDS |
| GAATTTGAGAAACATGATGA+AGG | 0.545619 | 6.1:+3350908 | MS.gene54652:CDS |
| CTGCTTGCTGGATCTTCTGA+GGG | 0.553364 | 6.1:+3349302 | MS.gene54652:CDS |
| TTGTTTCACTTACTTGCAGG+TGG | 0.562484 | 6.1:-3347507 | None:intergenic |
| ACTGCTTGCTGGATCTTCTG+AGG | 0.569083 | 6.1:+3349301 | MS.gene54652:CDS |
| GGCTATGGTGATAAAGGCTG+TGG | 0.569335 | 6.1:+3351543 | MS.gene54652:CDS |
| GGCCTTTGTTGTGATGCAAA+TGG | 0.574250 | 6.1:-3350842 | None:intergenic |
| CAACTGTAAGCCCTTTAGGA+TGG | 0.576300 | 6.1:-3349370 | None:intergenic |
| GTAACAACCATTGCAGGTGG+AGG | 0.576648 | 6.1:+3350040 | MS.gene54652:CDS |
| GTTAGCATTACTTAAGAGGA+GGG | 0.579193 | 6.1:+3350434 | MS.gene54652:CDS |
| TGATGGAAGACGTGAGGCTA+TGG | 0.581508 | 6.1:+3351528 | MS.gene54652:CDS |
| TGTTAGCATTACTTAAGAGG+AGG | 0.588173 | 6.1:+3350433 | MS.gene54652:CDS |
| GGTGCAGTTCAAGAACATGA+TGG | 0.596214 | 6.1:+3351511 | MS.gene54652:intron |
| AAACCAAAAGTTAAAGTACC+AGG | 0.610352 | 6.1:+3347674 | MS.gene54652:CDS |
| GGAGATATTTCAATTGAGTG+TGG | 0.612555 | 6.1:-3347993 | None:intergenic |
| CACCATTTGCATCACAACAA+AGG | 0.612868 | 6.1:+3350840 | MS.gene54652:CDS |
| GGAGGCCTAACTGATTTAGG+AGG | 0.614176 | 6.1:-3350866 | None:intergenic |
| CCTCACTTGGACCATCAACA+TGG | 0.615549 | 6.1:-3350084 | None:intergenic |
| AGTGCAACATAGTCGATCCA+TGG | 0.621478 | 6.1:+3347908 | MS.gene54652:intron |
| TCAATTGAAATATCTCCAGA+TGG | 0.621497 | 6.1:+3347999 | MS.gene54652:CDS |
| TAACCAACATAATTTAACCT+AGG | 0.625646 | 6.1:-3351604 | None:intergenic |
| ATTACTTAAGAGGAGGGTGA+CGG | 0.627394 | 6.1:+3350440 | MS.gene54652:CDS |
| ATATTGGACACATAGATGGA+AGG | 0.643121 | 6.1:+3349327 | MS.gene54652:CDS |
| GGGGTAACAACCATTGCAGG+TGG | 0.643595 | 6.1:+3350037 | MS.gene54652:intron |
| TCTTCATTAGGGATTAAAGG+AGG | 0.645407 | 6.1:-3350884 | None:intergenic |
| ATTTGAGAGTGGTTACAATG+TGG | 0.666565 | 6.1:+3347935 | MS.gene54652:CDS |
| TCCATGGTGAAATTTGAGAG+TGG | 0.666837 | 6.1:+3347924 | MS.gene54652:CDS |
| TAGGAAAAGAAACAATGACT+AGG | 0.672622 | 6.1:+3347415 | None:intergenic |
| ACCACTCTCAAATTTCACCA+TGG | 0.677537 | 6.1:-3347925 | None:intergenic |
| CCATGTTGATGGTCCAAGTG+AGG | 0.680475 | 6.1:+3350084 | MS.gene54652:CDS |
| AGAACATGATGGAAGACGTG+AGG | 0.685866 | 6.1:+3351522 | MS.gene54652:CDS |
| TGGATCATATCATACCTAAG+GGG | 0.695856 | 6.1:-3350273 | None:intergenic |
| GGGCTTACAGTTGATGACAG+TGG | 0.707025 | 6.1:+3349380 | MS.gene54652:CDS |
| TGCTTGCTGGATCTTCTGAG+GGG | 0.707915 | 6.1:+3349303 | MS.gene54652:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAATGTATATATTATA+AGG | - | chr6.1:3348155-3348174 | None:intergenic | 10.0% |
| !! | AAAATATATAAAGTATAACA+TGG | + | chr6.1:3348633-3348652 | MS.gene54652:intron | 10.0% |
| !! | AATATACTAAAAATAACTTA+TGG | - | chr6.1:3349623-3349642 | None:intergenic | 10.0% |
| !!! | AAACAAGATTTTAAAATTTT+AGG | - | chr6.1:3350780-3350799 | None:intergenic | 10.0% |
| !! | AAATTCTTTAGTATTAATTG+TGG | + | chr6.1:3348399-3348418 | MS.gene54652:intron | 15.0% |
| !! | ATCAAAAGAAAAATAAAGAA+AGG | + | chr6.1:3348714-3348733 | MS.gene54652:intron | 15.0% |
| !! | TAGTTAAAGATATATTGTTT+GGG | + | chr6.1:3348989-3349008 | MS.gene54652:intron | 15.0% |
| !! | TGAAAAAATAATAACATTAC+AGG | + | chr6.1:3350372-3350391 | MS.gene54652:intron | 15.0% |
| !! | TTAGTTAAAGATATATTGTT+TGG | + | chr6.1:3348988-3349007 | MS.gene54652:intron | 15.0% |
| !! | TTTCTTTATTGATATATGAT+TGG | + | chr6.1:3349146-3349165 | MS.gene54652:intron | 15.0% |
| !!! | AAGTTTGATATATCTTTTTT+AGG | + | chr6.1:3348113-3348132 | MS.gene54652:intron | 15.0% |
| !!! | AATAAGTTGAAAATATCTTA+TGG | - | chr6.1:3349817-3349836 | None:intergenic | 15.0% |
| !!! | AGTTTTCAAAATATATAGTA+AGG | + | chr6.1:3350569-3350588 | MS.gene54652:intron | 15.0% |
| !!! | ATTTTTTAATTTGTGACTAA+AGG | - | chr6.1:3348618-3348637 | None:intergenic | 15.0% |
| !!! | GTTAAATAAATTTTTAGTCT+TGG | - | chr6.1:3348302-3348321 | None:intergenic | 15.0% |
| !!! | GTTTTCAAAATATATAGTAA+GGG | + | chr6.1:3350570-3350589 | MS.gene54652:intron | 15.0% |
| !!! | TACTATATATTTTGAAAACT+CGG | - | chr6.1:3350569-3350588 | None:intergenic | 15.0% |
| !!! | TGCTTATCATTTTATATATA+GGG | + | chr6.1:3350329-3350348 | MS.gene54652:intron | 15.0% |
| !!! | TTGCTTATCATTTTATATAT+AGG | + | chr6.1:3350328-3350347 | MS.gene54652:intron | 15.0% |
| !! | AAATAGACCATAAATCAATT+TGG | - | chr6.1:3349516-3349535 | None:intergenic | 20.0% |
| !! | AAATATTCATAAGAGTTTAG+AGG | - | chr6.1:3347533-3347552 | None:intergenic | 20.0% |
| !! | AGAATGGAAATTTGAATAAA+AGG | - | chr6.1:3348329-3348348 | None:intergenic | 20.0% |
| !! | CAAACAAAAAAGAAACATAA+TGG | - | chr6.1:3349238-3349257 | None:intergenic | 20.0% |
| !! | CATATATCAATAAAGAAACT+AGG | - | chr6.1:3349144-3349163 | None:intergenic | 20.0% |
| !! | GCAAATGAAAATAAATACTA+AGG | - | chr6.1:3350312-3350331 | None:intergenic | 20.0% |
| !! | TACCAAAAAGAAAAGTAAAA+GGG | - | chr6.1:3348796-3348815 | None:intergenic | 20.0% |
| !!! | AAATTGATTTATGGTCTATT+TGG | + | chr6.1:3349515-3349534 | MS.gene54652:intron | 20.0% |
| !!! | AAGTGACGATAAATTTTAAT+AGG | + | chr6.1:3348247-3348266 | MS.gene54652:intron | 20.0% |
| !!! | AGTGACGATAAATTTTAATA+GGG | + | chr6.1:3348248-3348267 | MS.gene54652:intron | 20.0% |
| !!! | ATAATGGAAAATTTTCTAGA+GGG | - | chr6.1:3349222-3349241 | None:intergenic | 20.0% |
| !!! | ATATTATGGTGACTAAATTT+TGG | - | chr6.1:3351580-3351599 | None:intergenic | 20.0% |
| !!! | ATTTATCTTTGAGTTTCTTA+AGG | + | chr6.1:3348867-3348886 | MS.gene54652:intron | 20.0% |
| !!! | CATTATGTTTCTTTTTTGTT+TGG | + | chr6.1:3349236-3349255 | MS.gene54652:intron | 20.0% |
| !!! | GAATTTACCAAATTGATTTA+TGG | + | chr6.1:3349506-3349525 | MS.gene54652:intron | 20.0% |
| !!! | GCTTATCATTTTATATATAG+GGG | + | chr6.1:3350330-3350349 | MS.gene54652:intron | 20.0% |
| !!! | TAAAATCTTGTTTCATTTTC+AGG | + | chr6.1:3350787-3350806 | MS.gene54652:intron | 20.0% |
| !!! | TATATAGTAAGGGTTTTAAA+TGG | + | chr6.1:3350580-3350599 | MS.gene54652:intron | 20.0% |
| !!! | TGTTTAATTAAAGCGTTTAT+CGG | + | chr6.1:3349948-3349967 | MS.gene54652:intron | 20.0% |
| !!! | TTTAGGGTTTTTTTTTTGAA+AGG | - | chr6.1:3349994-3350013 | None:intergenic | 20.0% |
| !!! | TTTTGAAAGGTTATAGTTTA+GGG | - | chr6.1:3349981-3350000 | None:intergenic | 20.0% |
| !!! | TTTTTGAAAGGTTATAGTTT+AGG | - | chr6.1:3349982-3350001 | None:intergenic | 20.0% |
| ! | AAAGCATGTCTTATAGTTTA+GGG | - | chr6.1:3350010-3350029 | None:intergenic | 25.0% |
| ! | AACTTAGAAAATTTGAGCAA+AGG | - | chr6.1:3348098-3348117 | None:intergenic | 25.0% |
| ! | AATGTGGAAACAATATTTGA+TGG | + | chr6.1:3347951-3347970 | MS.gene54652:CDS | 25.0% |
| ! | ACTAAGGATAAGATTAAATG+TGG | - | chr6.1:3350296-3350315 | None:intergenic | 25.0% |
| ! | ATATGTTAGCATTACTTAAG+AGG | + | chr6.1:3350430-3350449 | MS.gene54652:CDS | 25.0% |
| ! | CATAAAAAATTGTTATGTCG+CGG | + | chr6.1:3350711-3350730 | MS.gene54652:intron | 25.0% |
| ! | CCAAAAAAGAAAACAGTTTA+TGG | + | chr6.1:3349693-3349712 | MS.gene54652:intron | 25.0% |
| ! | CGAGAAAATTATAAACTCAA+TGG | - | chr6.1:3347835-3347854 | None:intergenic | 25.0% |
| ! | CTTTCTGTTTGTCTATTTAT+CGG | - | chr6.1:3351277-3351296 | None:intergenic | 25.0% |
| ! | GAAACATCAAACATTCTTAA+AGG | - | chr6.1:3348479-3348498 | None:intergenic | 25.0% |
| ! | GAATGTTGTAACTTATAAAG+TGG | - | chr6.1:3348596-3348615 | None:intergenic | 25.0% |
| ! | GGAAATTTGAATAAAAGGTA+GGG | - | chr6.1:3348324-3348343 | None:intergenic | 25.0% |
| ! | GTACCAAAAAGAAAAGTAAA+AGG | - | chr6.1:3348797-3348816 | None:intergenic | 25.0% |
| ! | TAACCAACATAATTTAACCT+AGG | - | chr6.1:3351607-3351626 | None:intergenic | 25.0% |
| ! | TATAACATGGAATATCTACA+TGG | + | chr6.1:3348646-3348665 | MS.gene54652:intron | 25.0% |
| ! | TCTCAAATTCATCTTCATTA+GGG | - | chr6.1:3350898-3350917 | None:intergenic | 25.0% |
| ! | TCTTGCATATTAATCTCATA+TGG | + | chr6.1:3348189-3348208 | MS.gene54652:intron | 25.0% |
| ! | TGGAAATTTGAATAAAAGGT+AGG | - | chr6.1:3348325-3348344 | None:intergenic | 25.0% |
| ! | TTCTCAAATTCATCTTCATT+AGG | - | chr6.1:3350899-3350918 | None:intergenic | 25.0% |
| ! | TTGAGTTTCTTAAGGAAATT+AGG | + | chr6.1:3348875-3348894 | MS.gene54652:intron | 25.0% |
| ! | TTGGAAAAAACAAGAGATAA+CGG | + | chr6.1:3351217-3351236 | MS.gene54652:intron | 25.0% |
| !! | AAAAGCATGTCTTATAGTTT+AGG | - | chr6.1:3350011-3350030 | None:intergenic | 25.0% |
| !! | AAACTAGGAATATCATTTTG+AGG | - | chr6.1:3349129-3349148 | None:intergenic | 25.0% |
| !! | AATGATCTCTTATGCATTTT+AGG | + | chr6.1:3348219-3348238 | MS.gene54652:intron | 25.0% |
| !! | ACGTCTTATTAGTTGAATAT+CGG | + | chr6.1:3349063-3349082 | MS.gene54652:intron | 25.0% |
| !! | ATATGAAAGTGGTTTTCTTT+TGG | - | chr6.1:3351014-3351033 | None:intergenic | 25.0% |
| !! | ATGATCTCTTATGCATTTTA+GGG | + | chr6.1:3348220-3348239 | MS.gene54652:intron | 25.0% |
| !! | CCATAAACTGTTTTCTTTTT+TGG | - | chr6.1:3349696-3349715 | None:intergenic | 25.0% |
| !! | TATAACATGTTTAGAACTCA+AGG | - | chr6.1:3350749-3350768 | None:intergenic | 25.0% |
| !! | TTAAACTTTTGTTAAGCTCA+AGG | + | chr6.1:3348568-3348587 | MS.gene54652:intron | 25.0% |
| !! | TTGTTTCTTCTCTTCTTAAA+TGG | + | chr6.1:3347633-3347652 | MS.gene54652:CDS | 25.0% |
| !!! | AACTTATTTTCATGAGCTTT+TGG | + | chr6.1:3349829-3349848 | MS.gene54652:intron | 25.0% |
| !!! | ACTTATTTTCATGAGCTTTT+GGG | + | chr6.1:3349830-3349849 | MS.gene54652:intron | 25.0% |
| !!! | ATAAGACATGCTTTTTGTAT+AGG | + | chr6.1:3350016-3350035 | MS.gene54652:intron | 25.0% |
| !!! | ATCCCTTTTACTTTTCTTTT+TGG | + | chr6.1:3348791-3348810 | MS.gene54652:intron | 25.0% |
| !!! | ATCTTTTTGAGCTTATTCTT+AGG | + | chr6.1:3350986-3351005 | MS.gene54652:intron | 25.0% |
| !!! | CATAATGGAAAATTTTCTAG+AGG | - | chr6.1:3349223-3349242 | None:intergenic | 25.0% |
| !!! | GTGACGATAAATTTTAATAG+GGG | + | chr6.1:3348249-3348268 | MS.gene54652:intron | 25.0% |
| !!! | TAAGACATGCTTTTTGTATA+GGG | + | chr6.1:3350017-3350036 | MS.gene54652:intron | 25.0% |
| !!! | TGACGATAAATTTTAATAGG+GGG | + | chr6.1:3348250-3348269 | MS.gene54652:intron | 25.0% |
| !!! | TTCTTTTTTGCAATCATTAG+AGG | + | chr6.1:3348676-3348695 | MS.gene54652:intron | 25.0% |
| !!! | TTTGCTTTTATTGTTCTACT+TGG | + | chr6.1:3347456-3347475 | MS.gene54652:CDS | 25.0% |
| AAAACCAAATATTCACCATC+TGG | - | chr6.1:3348017-3348036 | None:intergenic | 30.0% | |
| AAAAGTAAAAGGGATCATAG+TGG | - | chr6.1:3348786-3348805 | None:intergenic | 30.0% | |
| AAACAAAAACACCTTCACAA+AGG | + | chr6.1:3351158-3351177 | MS.gene54652:intron | 30.0% | |
| AAACAAGGAATTGGAAATGT+TGG | + | chr6.1:3351198-3351217 | MS.gene54652:intron | 30.0% | |
| AAAGTAAAAGGGATCATAGT+GGG | - | chr6.1:3348785-3348804 | None:intergenic | 30.0% | |
| AAATAGCAACAACAAGAGAA+TGG | - | chr6.1:3348345-3348364 | None:intergenic | 30.0% | |
| AACATATCCTTACACAAACA+AGG | + | chr6.1:3351183-3351202 | MS.gene54652:intron | 30.0% | |
| AATAAGACGTAAGTAAAGTC+TGG | - | chr6.1:3349053-3349072 | None:intergenic | 30.0% | |
| AATTTAGTGAAATCTGTCAC+TGG | - | chr6.1:3347782-3347801 | None:intergenic | 30.0% | |
| AGTAGAATCAAAAGATTTCC+CGG | - | chr6.1:3348536-3348555 | None:intergenic | 30.0% | |
| ATAACTTATGGACATGTCAT+CGG | - | chr6.1:3349611-3349630 | None:intergenic | 30.0% | |
| ATAGACAACATTCCAATTCA+TGG | + | chr6.1:3351080-3351099 | MS.gene54652:intron | 30.0% | |
| ATCACAAAACTTTCTTGCAT+TGG | - | chr6.1:3351106-3351125 | None:intergenic | 30.0% | |
| ATTAGAAAGATCAGTGATGA+AGG | + | chr6.1:3349437-3349456 | MS.gene54652:CDS | 30.0% | |
| CTTCTCTTCTTAAATGGATA+TGG | + | chr6.1:3347639-3347658 | MS.gene54652:CDS | 30.0% | |
| GAATTTGAGAAACATGATGA+AGG | + | chr6.1:3350908-3350927 | MS.gene54652:CDS | 30.0% | |
| GCTAAATGGTTAAACTCAAA+TGG | + | chr6.1:3348955-3348974 | MS.gene54652:intron | 30.0% | |
| GGAAATTAGGAAATATCACA+TGG | + | chr6.1:3348888-3348907 | MS.gene54652:intron | 30.0% | |
| GGAAATTTACATCTTGACAT+TGG | - | chr6.1:3348077-3348096 | None:intergenic | 30.0% | |
| GTGAATATCACTTTCGAAAA+TGG | - | chr6.1:3349100-3349119 | None:intergenic | 30.0% | |
| TCAATTGAAATATCTCCAGA+TGG | + | chr6.1:3347999-3348018 | MS.gene54652:CDS | 30.0% | |
| TCATCTTCATTAGGGATTAA+AGG | - | chr6.1:3350890-3350909 | None:intergenic | 30.0% | |
| TTAACCTAGGACGAATATTA+TGG | - | chr6.1:3351594-3351613 | None:intergenic | 30.0% | |
| TTCATCACTGATCTTTCTAA+TGG | - | chr6.1:3349438-3349457 | None:intergenic | 30.0% | |
| TTCTTCTCATAGTAACTTGA+TGG | - | chr6.1:3351466-3351485 | None:intergenic | 30.0% | |
| ! | AAAACTCGGTATCCAATTTT+AGG | - | chr6.1:3350555-3350574 | None:intergenic | 30.0% |
| ! | AAACCAAAAGTTAAAGTACC+AGG | + | chr6.1:3347674-3347693 | MS.gene54652:CDS | 30.0% |
| ! | AAACTCGGTATCCAATTTTA+GGG | - | chr6.1:3350554-3350573 | None:intergenic | 30.0% |
| ! | ACACACTTGAATTTTGAATC+TGG | - | chr6.1:3348456-3348475 | None:intergenic | 30.0% |
| ! | TAAACACTTGAGAGACTTTT+TGG | + | chr6.1:3349567-3349586 | MS.gene54652:intron | 30.0% |
| !! | AAGACATGCTTTTTGTATAG+GGG | + | chr6.1:3350018-3350037 | MS.gene54652:intron | 30.0% |
| !! | ACGATAAATTTTAATAGGGG+GGG | + | chr6.1:3348252-3348271 | MS.gene54652:intron | 30.0% |
| !! | AGATGGTGAATATTTGGTTT+TGG | + | chr6.1:3348016-3348035 | MS.gene54652:CDS | 30.0% |
| !! | CAGCTTTTGAAAACAGTTTA+TGG | + | chr6.1:3349661-3349680 | MS.gene54652:intron | 30.0% |
| !! | GACGATAAATTTTAATAGGG+GGG | + | chr6.1:3348251-3348270 | MS.gene54652:intron | 30.0% |
| !! | GGTGTTTTTGTTTCCATATT+AGG | - | chr6.1:3351151-3351170 | None:intergenic | 30.0% |
| !! | GTTTCATTTTCAGGATTCAA+GGG | + | chr6.1:3350796-3350815 | MS.gene54652:intron | 30.0% |
| !! | GTTTTTGTTTCCATATTAGG+AGG | - | chr6.1:3351148-3351167 | None:intergenic | 30.0% |
| !! | TGGTACTTTAACTTTTGGTT+TGG | - | chr6.1:3347675-3347694 | None:intergenic | 30.0% |
| !! | TGGTATTGATGATATGAAAG+TGG | - | chr6.1:3351025-3351044 | None:intergenic | 30.0% |
| !! | TGTTTCATTTTCAGGATTCA+AGG | + | chr6.1:3350795-3350814 | MS.gene54652:intron | 30.0% |
| !!! | ATAGTAAGGGTTTTAAATGG+TGG | + | chr6.1:3350583-3350602 | MS.gene54652:intron | 30.0% |
| !!! | TAGGAATATCATTTTGAGGT+TGG | - | chr6.1:3349125-3349144 | None:intergenic | 30.0% |
| AAAAAATTTGTCACCCTGAG+GGG | - | chr6.1:3350512-3350531 | None:intergenic | 35.0% | |
| AAGTAAAAGGGATCATAGTG+GGG | - | chr6.1:3348784-3348803 | None:intergenic | 35.0% | |
| AGAATAATGACTTTGCACCT+TGG | - | chr6.1:3351434-3351453 | None:intergenic | 35.0% | |
| AGGAAATATCACATGGAGAT+TGG | + | chr6.1:3348895-3348914 | MS.gene54652:intron | 35.0% | |
| AGTGAACTCAAGTTCATCAA+TGG | + | chr6.1:3350958-3350977 | MS.gene54652:CDS | 35.0% | |
| ATATTGGACACATAGATGGA+AGG | + | chr6.1:3349327-3349346 | MS.gene54652:CDS | 35.0% | |
| ATCTCCAGATGGTGAATATT+TGG | + | chr6.1:3348010-3348029 | MS.gene54652:CDS | 35.0% | |
| ATTTGAGAGTGGTTACAATG+TGG | + | chr6.1:3347935-3347954 | MS.gene54652:CDS | 35.0% | |
| CAAAAAATTTGTCACCCTGA+GGG | - | chr6.1:3350513-3350532 | None:intergenic | 35.0% | |
| CATAGAGTGAAGACAAAATC+TGG | + | chr6.1:3348933-3348952 | MS.gene54652:intron | 35.0% | |
| CATTGCAGACACATTGAATA+TGG | + | chr6.1:3349412-3349431 | MS.gene54652:CDS | 35.0% | |
| CGCTGCAATCATTAATATTG+CGG | + | chr6.1:3350627-3350646 | MS.gene54652:intron | 35.0% | |
| CGTCCTAGGTTAAATTATGT+TGG | + | chr6.1:3351601-3351620 | MS.gene54652:CDS | 35.0% | |
| GAAGACAAAATCTGGCTAAA+TGG | + | chr6.1:3348941-3348960 | MS.gene54652:intron | 35.0% | |
| GAAGCAAAGTCATATGTACA+AGG | - | chr6.1:3348509-3348528 | None:intergenic | 35.0% | |
| GAGACAAATGAGATTGTGTT+TGG | + | chr6.1:3351490-3351509 | MS.gene54652:intron | 35.0% | |
| GGAGATATTTCAATTGAGTG+TGG | - | chr6.1:3347996-3348015 | None:intergenic | 35.0% | |
| GTAGAATCAAAAGATTTCCC+GGG | - | chr6.1:3348535-3348554 | None:intergenic | 35.0% | |
| GTGAACTCAAGTTCATCAAT+GGG | + | chr6.1:3350959-3350978 | MS.gene54652:CDS | 35.0% | |
| GTGGATCATATCATACCTAA+GGG | - | chr6.1:3350277-3350296 | None:intergenic | 35.0% | |
| GTTAGCATTACTTAAGAGGA+GGG | + | chr6.1:3350434-3350453 | MS.gene54652:CDS | 35.0% | |
| GTTGTTGATGTTGATGTTGT+TGG | - | chr6.1:3351045-3351064 | None:intergenic | 35.0% | |
| TAGTTGAATATCGGATTACC+AGG | + | chr6.1:3349072-3349091 | MS.gene54652:intron | 35.0% | |
| TATGACAATAGTTTCCCCTT+AGG | + | chr6.1:3350259-3350278 | MS.gene54652:CDS | 35.0% | |
| TCAAAAAATTTGTCACCCTG+AGG | - | chr6.1:3350514-3350533 | None:intergenic | 35.0% | |
| TCCTTACACAAACAAGGAAT+TGG | + | chr6.1:3351189-3351208 | MS.gene54652:intron | 35.0% | |
| TCTACTAGTAAATCTCTACC+TGG | - | chr6.1:3347695-3347714 | None:intergenic | 35.0% | |
| TCTTCATTAGGGATTAAAGG+AGG | - | chr6.1:3350887-3350906 | None:intergenic | 35.0% | |
| TGACATGCAGAAATTGTTAC+TGG | + | chr6.1:3347596-3347615 | MS.gene54652:intron | 35.0% | |
| TGGATCATATCATACCTAAG+GGG | - | chr6.1:3350276-3350295 | None:intergenic | 35.0% | |
| TGTGGATCATATCATACCTA+AGG | - | chr6.1:3350278-3350297 | None:intergenic | 35.0% | |
| TGTTAGCATTACTTAAGAGG+AGG | + | chr6.1:3350433-3350452 | MS.gene54652:CDS | 35.0% | |
| TTAAATGGTGGTCATGGTAA+CGG | + | chr6.1:3350595-3350614 | MS.gene54652:intron | 35.0% | |
| TTTGTTTCCATATTAGGAGG+TGG | - | chr6.1:3351145-3351164 | None:intergenic | 35.0% | |
| ! | ACTGTTTTCAAAAGCTGTCT+TGG | - | chr6.1:3349658-3349677 | None:intergenic | 35.0% |
| ! | ATATTTGATGGACGTAAGCT+TGG | + | chr6.1:3347963-3347982 | MS.gene54652:CDS | 35.0% |
| ! | GGATATGTTTTCCTTTGTGA+AGG | - | chr6.1:3351172-3351191 | None:intergenic | 35.0% |
| ! | TAGAAGTAGTTGCTCTCTTT+TGG | + | chr6.1:3350144-3350163 | MS.gene54652:CDS | 35.0% |
| ! | TCCAATTCCTTGTTTGTGTA+AGG | - | chr6.1:3351193-3351212 | None:intergenic | 35.0% |
| ! | TTTTGGTACTTCTTGCTACA+TGG | + | chr6.1:3348808-3348827 | MS.gene54652:intron | 35.0% |
| !! | CTACCTGGTACTTTAACTTT+TGG | - | chr6.1:3347680-3347699 | None:intergenic | 35.0% |
| !! | CTCTTGTTGTTGCTATTTGT+TGG | + | chr6.1:3348347-3348366 | MS.gene54652:intron | 35.0% |
| !! | GCAAGAAAGTTTTGTGATTC+CGG | + | chr6.1:3351108-3351127 | MS.gene54652:intron | 35.0% |
| !!! | CTTGTTTCTGCTGGATTTTT+TGG | + | chr6.1:3350405-3350424 | MS.gene54652:CDS | 35.0% |
| AAGCTGTCTTGGAGAGTTTA+TGG | - | chr6.1:3349647-3349666 | None:intergenic | 40.0% | |
| ACCACTCTCAAATTTCACCA+TGG | - | chr6.1:3347928-3347947 | None:intergenic | 40.0% | |
| AGGGCACATATAAGGACAAA+AGG | + | chr6.1:3350815-3350834 | MS.gene54652:CDS | 40.0% | |
| ATTACTTAAGAGGAGGGTGA+CGG | + | chr6.1:3350440-3350459 | MS.gene54652:CDS | 40.0% | |
| CAAGACTGAACCATCCTAAA+GGG | + | chr6.1:3349360-3349379 | MS.gene54652:CDS | 40.0% | |
| CACCATTTGCATCACAACAA+AGG | + | chr6.1:3350840-3350859 | MS.gene54652:CDS | 40.0% | |
| GAAAACTTTGCATCCTCACT+TGG | - | chr6.1:3350100-3350119 | None:intergenic | 40.0% | |
| GGGTATATTGGACACATAGA+TGG | + | chr6.1:3349323-3349342 | MS.gene54652:CDS | 40.0% | |
| GTCACCATAATATTCGTCCT+AGG | + | chr6.1:3351587-3351606 | MS.gene54652:CDS | 40.0% | |
| GTTTGTCTATTTATCGGCAC+AGG | - | chr6.1:3351271-3351290 | None:intergenic | 40.0% | |
| TCACTTTCGAAAATGGATCC+TGG | - | chr6.1:3349093-3349112 | None:intergenic | 40.0% | |
| TCATCAACTGTAAGCCCTTT+AGG | - | chr6.1:3349377-3349396 | None:intergenic | 40.0% | |
| TCCATGGTGAAATTTGAGAG+TGG | + | chr6.1:3347924-3347943 | MS.gene54652:CDS | 40.0% | |
| TGAGGTTGCATCAATCACAT+TGG | - | chr6.1:3350664-3350683 | None:intergenic | 40.0% | |
| TTCTATACAATGACCCCTCA+GGG | + | chr6.1:3350496-3350515 | MS.gene54652:intron | 40.0% | |
| TTGTTTCACTTACTTGCAGG+TGG | - | chr6.1:3347510-3347529 | None:intergenic | 40.0% | |
| ! | AAAGGAGGCCTAACTGATTT+AGG | - | chr6.1:3350872-3350891 | None:intergenic | 40.0% |
| ! | AAGTAGTTGCTCTCTTTTGG+TGG | + | chr6.1:3350147-3350166 | MS.gene54652:CDS | 40.0% |
| ! | AGATTAGTCGGCCCTAAAAT+TGG | + | chr6.1:3350540-3350559 | MS.gene54652:intron | 40.0% |
| ! | AGGATTCAAGGGCACATATA+AGG | + | chr6.1:3350807-3350826 | MS.gene54652:intron | 40.0% |
| ! | AGGTTGTTTCACTTACTTGC+AGG | - | chr6.1:3347513-3347532 | None:intergenic | 40.0% |
| ! | GAAGGCTTCTTTGTTTCTCT+TGG | + | chr6.1:3350926-3350945 | MS.gene54652:CDS | 40.0% |
| ! | GTGATAAAGGCTGTGGATTA+TGG | + | chr6.1:3351550-3351569 | MS.gene54652:CDS | 40.0% |
| ! | TCCCTCGCTAAATTTTGTGA+CGG | - | chr6.1:3347758-3347777 | None:intergenic | 40.0% |
| ! | TTCTTGCATTGGCCATGAAT+TGG | - | chr6.1:3351095-3351114 | None:intergenic | 40.0% |
| ! | TTTTGACCCCTCAGATTAGT+CGG | + | chr6.1:3350528-3350547 | MS.gene54652:intron | 40.0% |
| !! | GAAAGTTTTGTGATTCCGGA+CGG | + | chr6.1:3351112-3351131 | MS.gene54652:intron | 40.0% |
| !!! | AGGGTTTTAAATGGTGGTCA+TGG | + | chr6.1:3350589-3350608 | MS.gene54652:intron | 40.0% |
| ACGTGAGGCTATGGTGATAA+AGG | + | chr6.1:3351537-3351556 | MS.gene54652:CDS | 45.0% | |
| AGAACTCAAGGTAGCGATCT+AGG | - | chr6.1:3350737-3350756 | None:intergenic | 45.0% | |
| AGACGAACCACCTCCTAATA+TGG | + | chr6.1:3351135-3351154 | MS.gene54652:intron | 45.0% | |
| AGCAAACCAAAACTGCTTGC+TGG | + | chr6.1:3349290-3349309 | MS.gene54652:CDS | 45.0% | |
| AGTGCAACATAGTCGATCCA+TGG | + | chr6.1:3347908-3347927 | MS.gene54652:intron | 45.0% | |
| ATAGGGGTAACAACCATTGC+AGG | + | chr6.1:3350034-3350053 | MS.gene54652:intron | 45.0% | |
| ATATGACTTTGCTTCGTGCC+CGG | + | chr6.1:3348514-3348533 | MS.gene54652:intron | 45.0% | |
| ATTGCAGGTGGAGGAAAAAG+AGG | + | chr6.1:3350049-3350068 | MS.gene54652:CDS | 45.0% | |
| CAATTAGGAGGCCATGTTGA+TGG | + | chr6.1:3350073-3350092 | MS.gene54652:CDS | 45.0% | |
| CATCAACATGGCCTCCTAAT+TGG | - | chr6.1:3350075-3350094 | None:intergenic | 45.0% | |
| CCCGTCACAAAATTTAGCGA+GGG | + | chr6.1:3347754-3347773 | MS.gene54652:intron | 45.0% | |
| CTTCTATACAATGACCCCTC+AGG | + | chr6.1:3350495-3350514 | MS.gene54652:intron | 45.0% | |
| GATTGATGCAACCTCAGAAG+CGG | + | chr6.1:3350668-3350687 | MS.gene54652:intron | 45.0% | |
| GCAAGACTGAACCATCCTAA+AGG | + | chr6.1:3349359-3349378 | MS.gene54652:CDS | 45.0% | |
| GGAAAAAGAGGCCAATTAGG+AGG | + | chr6.1:3350061-3350080 | MS.gene54652:CDS | 45.0% | |
| GGAGGAAAAAGAGGCCAATT+AGG | + | chr6.1:3350058-3350077 | MS.gene54652:CDS | 45.0% | |
| GGTGCAGTTCAAGAACATGA+TGG | + | chr6.1:3351511-3351530 | MS.gene54652:intron | 45.0% | |
| TGGTTCAGTCTTGCATCTCT+AGG | - | chr6.1:3349353-3349372 | None:intergenic | 45.0% | |
| TGTCTATTTATCGGCACAGG+CGG | - | chr6.1:3351268-3351287 | None:intergenic | 45.0% | |
| TTTCACTTACTTGCAGGTGG+TGG | - | chr6.1:3347507-3347526 | None:intergenic | 45.0% | |
| ! | AGAACATGATGGAAGACGTG+AGG | + | chr6.1:3351522-3351541 | MS.gene54652:CDS | 45.0% |
| ! | CAACTGTAAGCCCTTTAGGA+TGG | - | chr6.1:3349373-3349392 | None:intergenic | 45.0% |
| ! | CCCTCGCTAAATTTTGTGAC+GGG | - | chr6.1:3347757-3347776 | None:intergenic | 45.0% |
| ! | CCTCGCTAAATTTTGTGACG+GGG | - | chr6.1:3347756-3347775 | None:intergenic | 45.0% |
| ! | GAAGATCCAGCAAGCAGTTT+TGG | - | chr6.1:3349299-3349318 | None:intergenic | 45.0% |
| ! | GGATCTTCTGAGGGGTATAT+TGG | + | chr6.1:3349311-3349330 | MS.gene54652:CDS | 45.0% |
| ! | GGCCTTTGTTGTGATGCAAA+TGG | - | chr6.1:3350845-3350864 | None:intergenic | 45.0% |
| ! | TAGTTGCTCTCTTTTGGTGG+TGG | + | chr6.1:3350150-3350169 | MS.gene54652:CDS | 45.0% |
| ! | TCTTTTTCCTCCACCTGCAA+TGG | - | chr6.1:3350050-3350069 | None:intergenic | 45.0% |
| ! | TTTAGGGCCGACTAATCTGA+GGG | - | chr6.1:3350538-3350557 | None:intergenic | 45.0% |
| !! | ATAGCTGCTCTTGTTTCTGC+TGG | + | chr6.1:3350396-3350415 | MS.gene54652:CDS | 45.0% |
| !!! | TCTCTTTTGGTGGTGGATAG+AGG | + | chr6.1:3350157-3350176 | MS.gene54652:CDS | 45.0% |
| !!! | TTTTAGGGCCGACTAATCTG+AGG | - | chr6.1:3350539-3350558 | None:intergenic | 45.0% |
| CCCCGTCACAAAATTTAGCG+AGG | + | chr6.1:3347753-3347772 | MS.gene54652:intron | 50.0% | |
| CCTCACTTGGACCATCAACA+TGG | - | chr6.1:3350087-3350106 | None:intergenic | 50.0% | |
| GGCCTCCTCCTAAATCAGTT+AGG | + | chr6.1:3350861-3350880 | MS.gene54652:CDS | 50.0% | |
| GGCTATGGTGATAAAGGCTG+TGG | + | chr6.1:3351543-3351562 | MS.gene54652:CDS | 50.0% | |
| GTAACAACCATTGCAGGTGG+AGG | + | chr6.1:3350040-3350059 | MS.gene54652:CDS | 50.0% | |
| TATGACTTTGCTTCGTGCCC+GGG | + | chr6.1:3348515-3348534 | MS.gene54652:intron | 50.0% | |
| TGATGGAAGACGTGAGGCTA+TGG | + | chr6.1:3351528-3351547 | MS.gene54652:CDS | 50.0% | |
| TTAGGGCCGACTAATCTGAG+GGG | - | chr6.1:3350537-3350556 | None:intergenic | 50.0% | |
| ! | ACTGCTTGCTGGATCTTCTG+AGG | + | chr6.1:3349301-3349320 | MS.gene54652:CDS | 50.0% |
| ! | CTGCTTGCTGGATCTTCTGA+GGG | + | chr6.1:3349302-3349321 | MS.gene54652:CDS | 50.0% |
| ! | GGAGGCCTAACTGATTTAGG+AGG | - | chr6.1:3350869-3350888 | None:intergenic | 50.0% |
| ! | GGCCTAACTGATTTAGGAGG+AGG | - | chr6.1:3350866-3350885 | None:intergenic | 50.0% |
| ! | TGCTTGCTGGATCTTCTGAG+GGG | + | chr6.1:3349303-3349322 | MS.gene54652:CDS | 50.0% |
| !! | CCATGTTGATGGTCCAAGTG+AGG | + | chr6.1:3350084-3350103 | MS.gene54652:CDS | 50.0% |
| !! | GGGCTTACAGTTGATGACAG+TGG | + | chr6.1:3349380-3349399 | MS.gene54652:CDS | 50.0% |
| CTATTTATCGGCACAGGCGG+AGG | - | chr6.1:3351265-3351284 | None:intergenic | 55.0% | |
| GGGGTAACAACCATTGCAGG+TGG | + | chr6.1:3350037-3350056 | MS.gene54652:intron | 55.0% | |
| ! | GGTGGTGGTGTAGCTGAAGT+TGG | - | chr6.1:3347492-3347511 | None:intergenic | 55.0% |
| TGACAACGCAGCCGCTTCTG+AGG | - | chr6.1:3350682-3350701 | None:intergenic | 60.0% | |
| GGAGGTGGTTCGTCTCCGTC+CGG | - | chr6.1:3351130-3351149 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 3347429 | 3351642 | 3347429 | ID=MS.gene54652 |
| chr6.1 | mRNA | 3347429 | 3351642 | 3347429 | ID=MS.gene54652.t1;Parent=MS.gene54652 |
| chr6.1 | exon | 3347429 | 3347516 | 3347429 | ID=MS.gene54652.t1.exon1;Parent=MS.gene54652.t1 |
| chr6.1 | CDS | 3347429 | 3347516 | 3347429 | ID=cds.MS.gene54652.t1;Parent=MS.gene54652.t1 |
| chr6.1 | exon | 3347606 | 3347695 | 3347606 | ID=MS.gene54652.t1.exon2;Parent=MS.gene54652.t1 |
| chr6.1 | CDS | 3347606 | 3347695 | 3347606 | ID=cds.MS.gene54652.t1;Parent=MS.gene54652.t1 |
| chr6.1 | exon | 3347910 | 3348086 | 3347910 | ID=MS.gene54652.t1.exon3;Parent=MS.gene54652.t1 |
| chr6.1 | CDS | 3347910 | 3348086 | 3347910 | ID=cds.MS.gene54652.t1;Parent=MS.gene54652.t1 |
| chr6.1 | exon | 3349288 | 3349458 | 3349288 | ID=MS.gene54652.t1.exon4;Parent=MS.gene54652.t1 |
| chr6.1 | CDS | 3349288 | 3349458 | 3349288 | ID=cds.MS.gene54652.t1;Parent=MS.gene54652.t1 |
| chr6.1 | exon | 3350038 | 3350280 | 3350038 | ID=MS.gene54652.t1.exon5;Parent=MS.gene54652.t1 |
| chr6.1 | CDS | 3350038 | 3350280 | 3350038 | ID=cds.MS.gene54652.t1;Parent=MS.gene54652.t1 |
| chr6.1 | exon | 3350394 | 3350482 | 3350394 | ID=MS.gene54652.t1.exon6;Parent=MS.gene54652.t1 |
| chr6.1 | CDS | 3350394 | 3350482 | 3350394 | ID=cds.MS.gene54652.t1;Parent=MS.gene54652.t1 |
| chr6.1 | exon | 3350809 | 3350980 | 3350809 | ID=MS.gene54652.t1.exon7;Parent=MS.gene54652.t1 |
| chr6.1 | CDS | 3350809 | 3350980 | 3350809 | ID=cds.MS.gene54652.t1;Parent=MS.gene54652.t1 |
| chr6.1 | exon | 3351518 | 3351642 | 3351518 | ID=MS.gene54652.t1.exon8;Parent=MS.gene54652.t1 |
| chr6.1 | CDS | 3351518 | 3351642 | 3351518 | ID=cds.MS.gene54652.t1;Parent=MS.gene54652.t1 |
| Gene Sequence |
| Protein sequence |
