Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058909.t1 | XP_013446714.1 | 98 | 704 | 14 | 0 | 1 | 704 | 1 | 704 | 0.00E+00 | 1412.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058909.t1 | Q9SS87 | 40.0 | 720 | 400 | 14 | 1 | 704 | 26 | 729 | 3.6e-150 | 533.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058909.t1 | A0A072TU76 | 98.0 | 704 | 14 | 0 | 1 | 704 | 1 | 704 | 0.0e+00 | 1412.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049418 | MS.gene058909 | 0.812974 | 3.24E-51 | -1.69E-46 |
MS.gene049696 | MS.gene058909 | 0.809315 | 2.01E-50 | -1.69E-46 |
MS.gene049698 | MS.gene058909 | 0.844278 | 8.35E-59 | -1.69E-46 |
MS.gene05017 | MS.gene058909 | 0.820191 | 7.82E-53 | -1.69E-46 |
MS.gene054118 | MS.gene058909 | 0.837921 | 3.91E-57 | -1.69E-46 |
MS.gene055371 | MS.gene058909 | 0.835445 | 1.67E-56 | -1.69E-46 |
MS.gene058351 | MS.gene058909 | 0.821978 | 3.03E-53 | -1.69E-46 |
MS.gene058823 | MS.gene058909 | 0.816333 | 5.84E-52 | -1.69E-46 |
MS.gene058909 | MS.gene058912 | 0.997742 | 2.80E-248 | -1.69E-46 |
MS.gene058909 | MS.gene05894 | 0.817429 | 3.31E-52 | -1.69E-46 |
MS.gene058909 | MS.gene061567 | 0.826541 | 2.56E-54 | -1.69E-46 |
MS.gene058909 | MS.gene064754 | 0.842145 | 3.09E-58 | -1.69E-46 |
MS.gene058909 | MS.gene065544 | 0.80931 | 2.02E-50 | -1.69E-46 |
MS.gene058909 | MS.gene065979 | 0.833186 | 6.16E-56 | -1.69E-46 |
MS.gene058909 | MS.gene065981 | 0.801361 | 9.34E-49 | -1.69E-46 |
MS.gene058909 | MS.gene066929 | 0.837793 | 4.21E-57 | -1.69E-46 |
MS.gene058909 | MS.gene067270 | 0.855338 | 6.74E-62 | -1.69E-46 |
MS.gene058909 | MS.gene067271 | 0.85914 | 5.08E-63 | -1.69E-46 |
MS.gene058909 | MS.gene06793 | 0.822688 | 2.07E-53 | -1.69E-46 |
MS.gene058909 | MS.gene068306 | 0.801788 | 7.63E-49 | -1.69E-46 |
MS.gene058909 | MS.gene07246 | 0.818141 | 2.29E-52 | -1.69E-46 |
MS.gene058909 | MS.gene073454 | 0.812885 | 3.38E-51 | -1.69E-46 |
MS.gene058909 | MS.gene08339 | 0.818309 | 2.10E-52 | -1.69E-46 |
MS.gene058909 | MS.gene08679 | 0.803962 | 2.71E-49 | -1.69E-46 |
MS.gene058909 | MS.gene09973 | 0.818409 | 1.99E-52 | -1.69E-46 |
MS.gene058909 | MS.gene20276 | 0.801274 | 9.73E-49 | -1.69E-46 |
MS.gene058909 | MS.gene20903 | 0.818738 | 1.68E-52 | -1.69E-46 |
MS.gene058909 | MS.gene21391 | 0.805483 | 1.31E-49 | -1.69E-46 |
MS.gene058909 | MS.gene22148 | 0.868277 | 7.36E-66 | -1.69E-46 |
MS.gene058909 | MS.gene25966 | 0.887508 | 1.34E-72 | -1.69E-46 |
MS.gene058909 | MS.gene27860 | 0.83735 | 5.47E-57 | -1.69E-46 |
MS.gene058909 | MS.gene27862 | 0.811315 | 7.45E-51 | -1.69E-46 |
MS.gene058909 | MS.gene27994 | 0.804085 | 2.56E-49 | -1.69E-46 |
MS.gene058909 | MS.gene29077 | 0.852569 | 4.24E-61 | -1.69E-46 |
MS.gene058909 | MS.gene29358 | 0.876968 | 9.15E-69 | -1.69E-46 |
MS.gene058909 | MS.gene29884 | 0.865967 | 4.02E-65 | -1.69E-46 |
MS.gene058909 | MS.gene31803 | 0.833834 | 4.25E-56 | -1.69E-46 |
MS.gene058909 | MS.gene32360 | 0.846859 | 1.67E-59 | -1.69E-46 |
MS.gene058909 | MS.gene34943 | 0.863157 | 3.04E-64 | -1.69E-46 |
MS.gene058909 | MS.gene34953 | 0.82209 | 2.85E-53 | -1.69E-46 |
MS.gene058909 | MS.gene35007 | 0.846563 | 2.01E-59 | -1.69E-46 |
MS.gene058909 | MS.gene37852 | 0.836016 | 1.20E-56 | -1.69E-46 |
MS.gene058909 | MS.gene38763 | 0.834007 | 3.84E-56 | -1.69E-46 |
MS.gene058909 | MS.gene38829 | 0.802132 | 6.49E-49 | -1.69E-46 |
MS.gene058909 | MS.gene39843 | 0.814688 | 1.36E-51 | -1.69E-46 |
MS.gene058909 | MS.gene39845 | 0.811566 | 6.57E-51 | -1.69E-46 |
MS.gene058909 | MS.gene42263 | 0.821702 | 3.51E-53 | -1.69E-46 |
MS.gene058909 | MS.gene42334 | 0.800235 | 1.59E-48 | -1.69E-46 |
MS.gene058909 | MS.gene44375 | 0.820875 | 5.44E-53 | -1.69E-46 |
MS.gene058909 | MS.gene47958 | 0.999568 | 9.881313e-324 | -1.69E-46 |
MS.gene058909 | MS.gene47960 | 0.99686 | 2.86E-233 | -1.69E-46 |
MS.gene058909 | MS.gene47963 | 0.989276 | 1.97E-177 | -1.69E-46 |
MS.gene058909 | MS.gene51520 | 0.829436 | 5.15E-55 | -1.69E-46 |
MS.gene058909 | MS.gene51531 | 0.81634 | 5.82E-52 | -1.69E-46 |
MS.gene058909 | MS.gene53003 | 0.852354 | 4.88E-61 | -1.69E-46 |
MS.gene058909 | MS.gene53004 | 0.809309 | 2.02E-50 | -1.69E-46 |
MS.gene058909 | MS.gene53376 | 0.837824 | 4.14E-57 | -1.69E-46 |
MS.gene058909 | MS.gene53481 | 0.821979 | 3.03E-53 | -1.69E-46 |
MS.gene058909 | MS.gene54652 | 0.821502 | 3.90E-53 | -1.69E-46 |
MS.gene058909 | MS.gene56186 | 0.820741 | 5.84E-53 | -1.69E-46 |
MS.gene058909 | MS.gene56487 | 0.82255 | 2.23E-53 | -1.69E-46 |
MS.gene058909 | MS.gene57072 | 0.815615 | 8.44E-52 | -1.69E-46 |
MS.gene058909 | MS.gene57665 | 0.80317 | 3.96E-49 | -1.69E-46 |
MS.gene058909 | MS.gene58836 | 0.812432 | 4.25E-51 | -1.69E-46 |
MS.gene058909 | MS.gene59879 | 0.847676 | 9.94E-60 | -1.69E-46 |
MS.gene058909 | MS.gene59880 | 0.841152 | 5.65E-58 | -1.69E-46 |
MS.gene058909 | MS.gene61572 | 0.832018 | 1.20E-55 | -1.69E-46 |
MS.gene058909 | MS.gene62603 | 0.853678 | 2.04E-61 | -1.69E-46 |
MS.gene058909 | MS.gene62780 | 0.852521 | 4.37E-61 | -1.69E-46 |
MS.gene058909 | MS.gene64560 | 0.819258 | 1.28E-52 | -1.69E-46 |
MS.gene058909 | MS.gene68650 | 0.809739 | 1.63E-50 | -1.69E-46 |
MS.gene058909 | MS.gene68652 | 0.814683 | 1.36E-51 | -1.69E-46 |
MS.gene058909 | MS.gene68852 | 0.803101 | 4.09E-49 | -1.69E-46 |
MS.gene058909 | MS.gene68949 | 0.803964 | 2.71E-49 | -1.69E-46 |
MS.gene058909 | MS.gene69404 | 0.844218 | 8.66E-59 | -1.69E-46 |
MS.gene058909 | MS.gene70711 | 0.850429 | 1.71E-60 | -1.69E-46 |
MS.gene058909 | MS.gene71459 | 0.889257 | 2.85E-73 | -1.69E-46 |
MS.gene058909 | MS.gene71460 | 0.886148 | 4.40E-72 | -1.69E-46 |
MS.gene058909 | MS.gene71461 | 0.813019 | 3.16E-51 | -1.69E-46 |
MS.gene058909 | MS.gene73497 | 0.818445 | 1.95E-52 | -1.69E-46 |
MS.gene058909 | MS.gene75180 | 0.837052 | 6.52E-57 | -1.69E-46 |
MS.gene058909 | MS.gene75220 | 0.864592 | 1.09E-64 | -1.69E-46 |
MS.gene058909 | MS.gene76991 | 0.840553 | 8.12E-58 | -1.69E-46 |
MS.gene058909 | MS.gene80266 | 0.838074 | 3.57E-57 | -1.69E-46 |
MS.gene058909 | MS.gene80867 | 0.811547 | 6.63E-51 | -1.69E-46 |
MS.gene058909 | MS.gene81678 | 0.801464 | 8.89E-49 | -1.69E-46 |
MS.gene058909 | MS.gene82359 | 0.836646 | 8.28E-57 | -1.69E-46 |
MS.gene058909 | MS.gene84497 | 0.857405 | 1.67E-62 | -1.69E-46 |
MS.gene058909 | MS.gene90610 | 0.804003 | 2.66E-49 | -1.69E-46 |
MS.gene058909 | MS.gene91794 | 0.824293 | 8.73E-54 | -1.69E-46 |
MS.gene058909 | MS.gene96235 | 0.89904 | 2.94E-77 | -1.69E-46 |
MS.gene058909 | MS.gene99415 | 0.810128 | 1.34E-50 | -1.69E-46 |
MS.gene058909 | MS.gene99526 | 0.807755 | 4.33E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058909.t1 | MTR_8g089660 | 98.011 | 704 | 14 | 0 | 1 | 704 | 1 | 704 | 0.0 | 1444 |
MS.gene058909.t1 | MTR_3g075450 | 52.991 | 702 | 316 | 8 | 7 | 704 | 15 | 706 | 0.0 | 745 |
MS.gene058909.t1 | MTR_7g032660 | 43.723 | 693 | 375 | 11 | 20 | 704 | 26 | 711 | 0.0 | 570 |
MS.gene058909.t1 | MTR_1g074950 | 32.521 | 698 | 402 | 20 | 17 | 703 | 23 | 662 | 1.70e-105 | 336 |
MS.gene058909.t1 | MTR_1g074990 | 31.746 | 693 | 413 | 23 | 17 | 703 | 22 | 660 | 3.32e-100 | 322 |
MS.gene058909.t1 | MTR_1g075095 | 31.124 | 694 | 418 | 23 | 17 | 703 | 22 | 662 | 3.14e-96 | 311 |
MS.gene058909.t1 | MTR_1g075230 | 30.914 | 689 | 419 | 21 | 22 | 704 | 26 | 663 | 8.34e-95 | 308 |
MS.gene058909.t1 | MTR_1g075030 | 30.836 | 694 | 420 | 23 | 17 | 703 | 22 | 662 | 3.05e-94 | 306 |
MS.gene058909.t1 | MTR_1g040360 | 29.014 | 710 | 416 | 24 | 20 | 703 | 30 | 677 | 1.06e-77 | 263 |
MS.gene058909.t1 | MTR_1g075170 | 25.301 | 664 | 369 | 25 | 88 | 704 | 84 | 667 | 3.09e-47 | 178 |
MS.gene058909.t1 | MTR_1g075180 | 27.202 | 647 | 372 | 24 | 87 | 704 | 60 | 636 | 1.11e-46 | 176 |
MS.gene058909.t1 | MTR_1g075153 | 25.645 | 620 | 396 | 19 | 101 | 704 | 93 | 663 | 3.26e-44 | 169 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058909.t1 | AT3G01680 | 39.973 | 728 | 389 | 14 | 1 | 704 | 26 | 729 | 0.0 | 540 |
MS.gene058909.t1 | AT3G01670 | 37.260 | 730 | 401 | 14 | 5 | 704 | 120 | 822 | 2.49e-156 | 473 |
MS.gene058909.t1 | AT3G01670 | 37.260 | 730 | 401 | 14 | 5 | 704 | 144 | 846 | 6.50e-156 | 473 |
MS.gene058909.t1 | AT1G67790 | 27.273 | 704 | 454 | 20 | 13 | 700 | 3 | 664 | 2.79e-74 | 253 |
Find 0 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAAGATCAAAAGTTAAA+TGG | + | 57395:23736-23755 | None:intergenic | 15.0% |
!!! | AGTATAATAATTGTTCTTTT+GGG | - | 57395:23755-23774 | MS.gene058909:CDS | 15.0% |
!!! | TAGTATAATAATTGTTCTTT+TGG | - | 57395:23754-23773 | MS.gene058909:CDS | 15.0% |
!! | ATATAGAGAATGAAAAACAT+AGG | + | 57395:23571-23590 | None:intergenic | 20.0% |
!! | ATCTTATTATTCATTGTTTC+AGG | - | 57395:23971-23990 | MS.gene058909:intron | 20.0% |
!! | GAATAATAAGATCAAAAGAA+CGG | + | 57395:23963-23982 | None:intergenic | 20.0% |
!! | TTATAACAGACTTTATGAAT+CGG | + | 57395:23860-23879 | None:intergenic | 20.0% |
!!! | AACATTAAGATATTTGTTGT+TGG | + | 57395:22383-22402 | None:intergenic | 20.0% |
!!! | ATCTAGTTCTAGAAAATATT+CGG | + | 57395:21824-21843 | None:intergenic | 20.0% |
!!! | TCATTATTTCTAGCATTATT+TGG | + | 57395:24283-24302 | None:intergenic | 20.0% |
!!! | TTGTTTTGAAATTTTACACA+GGG | - | 57395:21450-21469 | MS.gene058909:CDS | 20.0% |
! | AATGTTATCAAGCTATTCAT+GGG | - | 57395:21951-21970 | MS.gene058909:intron | 25.0% |
! | AATTAACAAAATTTCATGCG+AGG | - | 57395:21554-21573 | MS.gene058909:CDS | 25.0% |
! | AGAAGAACCAAATTATTGTT+GGG | + | 57395:24199-24218 | None:intergenic | 25.0% |
! | ATTTAAACATGTAATTCCCA+TGG | + | 57395:23790-23809 | None:intergenic | 25.0% |
! | CAATATTGTCACTCATATTT+GGG | + | 57395:21762-21781 | None:intergenic | 25.0% |
! | CTTTGATTGCTAAAATATAG+CGG | - | 57395:22571-22590 | MS.gene058909:CDS | 25.0% |
! | GTTAATTAACTATGTGTTTG+TGG | - | 57395:21427-21446 | MS.gene058909:CDS | 25.0% |
! | TCAATATTGTCACTCATATT+TGG | + | 57395:21763-21782 | None:intergenic | 25.0% |
! | TCTGTTATAAACAATCTTCT+TGG | - | 57395:23870-23889 | MS.gene058909:CDS | 25.0% |
!! | AAAGTCAATATGAACTTGTT+TGG | - | 57395:23200-23219 | MS.gene058909:intron | 25.0% |
!! | TTATTCATTGTTTCAGGTAA+CGG | - | 57395:23977-23996 | MS.gene058909:intron | 25.0% |
!!! | AACAATAATTTGGTTCTTCT+GGG | - | 57395:24199-24218 | MS.gene058909:intron | 25.0% |
!!! | CTAAATCAAGTTGATGATTT+AGG | - | 57395:22102-22121 | MS.gene058909:intron | 25.0% |
!!! | GTTGTTTTGAAATTTTACAC+AGG | - | 57395:21449-21468 | MS.gene058909:CDS | 25.0% |
!!! | TGTTTTGCTTTGTTGTAATT+TGG | + | 57395:24249-24268 | None:intergenic | 25.0% |
AAATACATATGCTTGTATGG+AGG | - | 57395:24005-24024 | MS.gene058909:intron | 30.0% | |
AATACATATGCTTGTATGGA+GGG | - | 57395:24006-24025 | MS.gene058909:intron | 30.0% | |
ACATCAACATGTTCTTCAAT+TGG | + | 57395:21287-21306 | None:intergenic | 30.0% | |
ATATCTTGCAAGTGTATGAT+GGG | - | 57395:21889-21908 | MS.gene058909:intron | 30.0% | |
ATTAACCTGTTACAATGATG+TGG | + | 57395:24491-24510 | None:intergenic | 30.0% | |
ATTACAACAAAGCAAAACAG+TGG | - | 57395:24250-24269 | MS.gene058909:CDS | 30.0% | |
CAGAAGAACCAAATTATTGT+TGG | + | 57395:24200-24219 | None:intergenic | 30.0% | |
CGTCAACATTTAGGTAATTA+AGG | - | 57395:22548-22567 | MS.gene058909:CDS | 30.0% | |
GAATGTTATCAAGCTATTCA+TGG | - | 57395:21950-21969 | MS.gene058909:intron | 30.0% | |
GAGCTTGTAGAAACAATTTA+CGG | + | 57395:21738-21757 | None:intergenic | 30.0% | |
GCATAACCAAACTAATAAAG+TGG | - | 57395:23606-23625 | MS.gene058909:CDS | 30.0% | |
TAAATATGCATGCTAATGCA+TGG | + | 57395:21594-21613 | None:intergenic | 30.0% | |
TAACATTCCAAGTATTCCTA+TGG | + | 57395:21938-21957 | None:intergenic | 30.0% | |
TCTTGAACAACATTAAGTAG+AGG | + | 57395:21314-21333 | None:intergenic | 30.0% | |
TGATCCATTACTCTTTGATT+GGG | - | 57395:23540-23559 | MS.gene058909:CDS | 30.0% | |
TGTTACAAAAAATGCATTGC+CGG | - | 57395:21789-21808 | MS.gene058909:intron | 30.0% | |
TTAGAACCTTAATGTTATCC+TGG | + | 57395:22821-22840 | None:intergenic | 30.0% | |
TTGATCCATTACTCTTTGAT+TGG | - | 57395:23539-23558 | MS.gene058909:CDS | 30.0% | |
TTTCTAACCTTGTTGAATCT+TGG | + | 57395:23183-23202 | None:intergenic | 30.0% | |
! | ACACTGTATGGTTTTTCTTT+AGG | - | 57395:22692-22711 | MS.gene058909:CDS | 30.0% |
! | AGTTAGCCACTTTATTAGTT+TGG | + | 57395:23615-23634 | None:intergenic | 30.0% |
! | CGTAGTATCATTATGCTTTT+TGG | - | 57395:21402-21421 | MS.gene058909:CDS | 30.0% |
! | TACATGTAGAACTTTTCCAT+TGG | + | 57395:24572-24591 | None:intergenic | 30.0% |
! | TCCAGTAACTAAATTGACTT+AGG | + | 57395:22628-22647 | None:intergenic | 30.0% |
! | TCTTTGGAAAGATGAAACAT+GGG | - | 57395:23492-23511 | MS.gene058909:CDS | 30.0% |
! | TTATCCTTTCTCTAGCTTAA+GGG | - | 57395:23462-23481 | MS.gene058909:CDS | 30.0% |
!! | ATAATCATTTTTCTGCCTTC+AGG | - | 57395:23048-23067 | MS.gene058909:intron | 30.0% |
!! | CAACAATAATTTGGTTCTTC+TGG | - | 57395:24198-24217 | MS.gene058909:intron | 30.0% |
!! | TTATTCCTAGTGCTGTTTAT+TGG | - | 57395:22256-22275 | MS.gene058909:CDS | 30.0% |
!!! | AAATATTCGGTTTTTAGTGC+CGG | + | 57395:21811-21830 | None:intergenic | 30.0% |
!!! | AGTTGCTAATTTTGATTGTC+CGG | + | 57395:23909-23928 | None:intergenic | 30.0% |
!!! | ATTCTTTTAACTTTCTGTCC+TGG | + | 57395:24131-24150 | None:intergenic | 30.0% |
!!! | CTCAAACTTCTGTTTTGTTT+CGG | + | 57395:23257-23276 | None:intergenic | 30.0% |
!!! | TTCTTTTAACTTTCTGTCCT+GGG | + | 57395:24130-24149 | None:intergenic | 30.0% |
AACAACCACATCATTGTAAC+AGG | - | 57395:24483-24502 | MS.gene058909:CDS | 35.0% | |
AACTGTCGTGTATTTGATGA+AGG | + | 57395:23670-23689 | None:intergenic | 35.0% | |
AAGAACTCTACAAATTCCAC+TGG | - | 57395:24079-24098 | MS.gene058909:intron | 35.0% | |
AAGGGTGATGTGAATGATAA+AGG | - | 57395:24422-24441 | MS.gene058909:CDS | 35.0% | |
AAGTATCAGGTACATTAAGG+AGG | - | 57395:23336-23355 | MS.gene058909:intron | 35.0% | |
ACTTGTTTGGATTCCAATTG+TGG | - | 57395:23213-23232 | MS.gene058909:intron | 35.0% | |
AGTACACATGATGTGGATTT+GGG | - | 57395:23429-23448 | MS.gene058909:intron | 35.0% | |
ATACATATGCTTGTATGGAG+GGG | - | 57395:24007-24026 | MS.gene058909:intron | 35.0% | |
ATCTCACCAGGATAACATTA+AGG | - | 57395:22812-22831 | MS.gene058909:intron | 35.0% | |
CAACCTCTTGATCAGATATA+TGG | + | 57395:23129-23148 | None:intergenic | 35.0% | |
CACTGGAAATGATGTATGTA+GGG | - | 57395:24096-24115 | MS.gene058909:intron | 35.0% | |
CATCTGCATCGTAACATATT+TGG | + | 57395:22743-22762 | None:intergenic | 35.0% | |
CTAACCCAATCAAAGAGTAA+TGG | + | 57395:23547-23566 | None:intergenic | 35.0% | |
GAACCAAATTATTGTTGGGT+CGG | + | 57395:24195-24214 | None:intergenic | 35.0% | |
GATATCTTGCAAGTGTATGA+TGG | - | 57395:21888-21907 | MS.gene058909:intron | 35.0% | |
GCAATGGATGATTACATACA+AGG | - | 57395:24455-24474 | MS.gene058909:CDS | 35.0% | |
GCCTAAGTCAATTTAGTTAC+TGG | - | 57395:22624-22643 | MS.gene058909:CDS | 35.0% | |
GCTATTGTCATAAGCTATCT+TGG | - | 57395:21672-21691 | MS.gene058909:CDS | 35.0% | |
GGCAAATACATATGCTTGTA+TGG | - | 57395:24002-24021 | MS.gene058909:intron | 35.0% | |
GTCCTAAAGATAGACTGATA+GGG | - | 57395:23707-23726 | MS.gene058909:CDS | 35.0% | |
GTGTATTTGATGAAGGAGAA+AGG | + | 57395:23663-23682 | None:intergenic | 35.0% | |
GTGTGTTAATCATGAAGATG+AGG | - | 57395:22664-22683 | MS.gene058909:CDS | 35.0% | |
TCCTAAAGATAGACTGATAG+GGG | - | 57395:23708-23727 | MS.gene058909:CDS | 35.0% | |
TGGATTCCAATTGTGGAAAA+GGG | - | 57395:23220-23239 | MS.gene058909:intron | 35.0% | |
TGTAACAGGTTAATACTTCC+AGG | - | 57395:24497-24516 | MS.gene058909:CDS | 35.0% | |
TGTATGTAATCATCCATTGC+AGG | + | 57395:24455-24474 | None:intergenic | 35.0% | |
TGTTACAATGATGTGGTTGT+TGG | + | 57395:24484-24503 | None:intergenic | 35.0% | |
TTAATACTTCCAGGAGTTGA+TGG | - | 57395:24506-24525 | MS.gene058909:CDS | 35.0% | |
TTAATGTACCTGATACTTGC+CGG | + | 57395:23334-23353 | None:intergenic | 35.0% | |
TTGGATTCCAATTGTGGAAA+AGG | - | 57395:23219-23238 | MS.gene058909:intron | 35.0% | |
TTGGTAGAACCATCAAACAA+TGG | + | 57395:22876-22895 | None:intergenic | 35.0% | |
TTTGATTGTCCGGTCTAAAT+CGG | + | 57395:23899-23918 | None:intergenic | 35.0% | |
! | AAATTTTACACAGGGAAAGC+AGG | - | 57395:21458-21477 | MS.gene058909:CDS | 35.0% |
! | CTATCAGTCTATCTTTAGGA+CGG | + | 57395:23708-23727 | None:intergenic | 35.0% |
! | CTCTTTGGAAAGATGAAACA+TGG | - | 57395:23491-23510 | MS.gene058909:CDS | 35.0% |
! | CTTATCCTTTCTCTAGCTTA+AGG | - | 57395:23461-23480 | MS.gene058909:CDS | 35.0% |
! | CTTTGGAAAGATGAAACATG+GGG | - | 57395:23493-23512 | MS.gene058909:CDS | 35.0% |
! | GCTCAGATTTTCGTCATATA+TGG | + | 57395:24162-24181 | None:intergenic | 35.0% |
! | TTTAAAGTGCCTTGATGAGT+TGG | - | 57395:24391-24410 | MS.gene058909:intron | 35.0% |
!! | AAGATATTTGTTGTTGGTGC+AGG | + | 57395:22377-22396 | None:intergenic | 35.0% |
!! | TAATTTGGTTCTTCTGGGTT+AGG | - | 57395:24204-24223 | MS.gene058909:intron | 35.0% |
!! | TGCTAAAATATAGCGGATAG+CGG | - | 57395:22578-22597 | MS.gene058909:CDS | 35.0% |
AACAGCACTAGGAATAAGAG+TGG | + | 57395:22253-22272 | None:intergenic | 40.0% | |
AAGATTGTATGTGCTGAGTG+TGG | - | 57395:24542-24561 | MS.gene058909:CDS | 40.0% | |
ACACATACCTGAATGATGTC+AGG | + | 57395:21365-21384 | None:intergenic | 40.0% | |
ACATCATGTGTACTGCATTC+AGG | + | 57395:23423-23442 | None:intergenic | 40.0% | |
ACCTAAATGTTGACGACAGA+TGG | + | 57395:22543-22562 | None:intergenic | 40.0% | |
AGCCAATGATGCCGAAAATA+TGG | + | 57395:22311-22330 | None:intergenic | 40.0% | |
AGTTTATGACCCTTCACTTC+TGG | - | 57395:23306-23325 | MS.gene058909:CDS | 40.0% | |
ATCGTCCAATAAACAGCACT+AGG | + | 57395:22264-22283 | None:intergenic | 40.0% | |
CACATACCTGAATGATGTCA+GGG | + | 57395:21364-21383 | None:intergenic | 40.0% | |
CAGTACACATGATGTGGATT+TGG | - | 57395:23428-23447 | MS.gene058909:intron | 40.0% | |
CATGTAATTCCCATGGAATC+TGG | + | 57395:23783-23802 | None:intergenic | 40.0% | |
CCACCATATATCTGATCAAG+AGG | - | 57395:23123-23142 | MS.gene058909:intron | 40.0% | |
CCACTGGAAATGATGTATGT+AGG | - | 57395:24095-24114 | MS.gene058909:intron | 40.0% | |
CCTACATACATCATTTCCAG+TGG | + | 57395:24098-24117 | None:intergenic | 40.0% | |
CCTCTTGATCAGATATATGG+TGG | + | 57395:23126-23145 | None:intergenic | 40.0% | |
CGTCCTAAAGATAGACTGAT+AGG | - | 57395:23706-23725 | MS.gene058909:CDS | 40.0% | |
CTTGATCAGATATATGGTGG+AGG | + | 57395:23123-23142 | None:intergenic | 40.0% | |
GAACCATCAAACAATGGCAA+CGG | + | 57395:22870-22889 | None:intergenic | 40.0% | |
GACATCAACAACAGAGACAT+GGG | - | 57395:22457-22476 | MS.gene058909:CDS | 40.0% | |
GATCACTGCTATCAAAGCTT+AGG | + | 57395:24310-24329 | None:intergenic | 40.0% | |
GATGAGGAAGAAACACTGTA+TGG | - | 57395:22680-22699 | MS.gene058909:CDS | 40.0% | |
GCAATCAGTAACATCCAACA+TGG | + | 57395:22163-22182 | None:intergenic | 40.0% | |
GCCAATGATGCCGAAAATAT+GGG | + | 57395:22310-22329 | None:intergenic | 40.0% | |
GGCAAGTATCAGGTACATTA+AGG | - | 57395:23333-23352 | MS.gene058909:intron | 40.0% | |
GGTTGGGCTATAATAAGTCA+AGG | - | 57395:24332-24351 | MS.gene058909:intron | 40.0% | |
GTACACATGATGTGGATTTG+GGG | - | 57395:23430-23449 | MS.gene058909:intron | 40.0% | |
GTCAAATAAGTCAGACTCGT+TGG | + | 57395:21511-21530 | None:intergenic | 40.0% | |
TCAGCACATACAATCTTGTC+TGG | + | 57395:24539-24558 | None:intergenic | 40.0% | |
TCCCCTATCAGTCTATCTTT+AGG | + | 57395:23712-23731 | None:intergenic | 40.0% | |
TGAATGCAGTACACATGATG+TGG | - | 57395:23422-23441 | MS.gene058909:intron | 40.0% | |
TGACATCAACAACAGAGACA+TGG | - | 57395:22456-22475 | MS.gene058909:CDS | 40.0% | |
TGATAGCAGTGATCTTGGTT+GGG | - | 57395:24316-24335 | MS.gene058909:intron | 40.0% | |
TGGTTCACAGCTTCGAATTT+AGG | + | 57395:22129-22148 | None:intergenic | 40.0% | |
TTCTATGCTAACCCTTTGCT+TGG | + | 57395:22895-22914 | None:intergenic | 40.0% | |
TTCTTCAATTGGAGCATGAG+TGG | + | 57395:21276-21295 | None:intergenic | 40.0% | |
! | AAAAGCTTTGATTCGCTGCA+AGG | - | 57395:22839-22858 | MS.gene058909:intron | 40.0% |
! | AGCTTTGATAGCAGTGATCT+TGG | - | 57395:24311-24330 | MS.gene058909:intron | 40.0% |
! | ATGCAACCGATTTAGCAAGA+CGG | + | 57395:22059-22078 | None:intergenic | 40.0% |
! | CACAAGTGCTGCAAAATCAA+TGG | - | 57395:24055-24074 | MS.gene058909:intron | 40.0% |
! | GCATGTGCATCCCATATTTT+CGG | - | 57395:22297-22316 | MS.gene058909:CDS | 40.0% |
! | GTTTTCGGCATCAGATGATA+CGG | - | 57395:21229-21248 | MS.gene058909:CDS | 40.0% |
! | TAAAGGAGTTTTGCCTGCAA+TGG | - | 57395:24439-24458 | MS.gene058909:CDS | 40.0% |
! | TCATGGTCAATGTACTGATC+AGG | + | 57395:22207-22226 | None:intergenic | 40.0% |
! | TCCCATATTTTCGGCATCAT+TGG | - | 57395:22306-22325 | MS.gene058909:CDS | 40.0% |
! | TGATGGTTCTACCAAGCAAA+GGG | - | 57395:22881-22900 | MS.gene058909:intron | 40.0% |
! | TGTAGAACTTTTCCATTGGC+TGG | + | 57395:24568-24587 | None:intergenic | 40.0% |
! | TTGATAGCAGTGATCTTGGT+TGG | - | 57395:24315-24334 | MS.gene058909:intron | 40.0% |
! | TTGATGGTTCTACCAAGCAA+AGG | - | 57395:22880-22899 | MS.gene058909:intron | 40.0% |
!! | GTGCTGTTTATTGGACGATT+AGG | - | 57395:22265-22284 | MS.gene058909:CDS | 40.0% |
!! | TATTTTCGGCATCATTGGCT+TGG | - | 57395:22311-22330 | MS.gene058909:CDS | 40.0% |
!! | TTGGACGATTAGGAGTATTG+TGG | - | 57395:22275-22294 | MS.gene058909:CDS | 40.0% |
!!! | ATTTTCGGCATCATTGGCTT+GGG | - | 57395:22312-22331 | MS.gene058909:CDS | 40.0% |
!!! | TTTTGGGATCCAGATTCCAT+GGG | - | 57395:23771-23790 | MS.gene058909:CDS | 40.0% |
AAAGCCTATGCTTGTGGTGT+TGG | - | 57395:23375-23394 | MS.gene058909:intron | 45.0% | |
AACATGGGGACTTGCACTAT+TGG | - | 57395:23507-23526 | MS.gene058909:CDS | 45.0% | |
AAGCTATTCATGGGATGCCA+AGG | - | 57395:21960-21979 | MS.gene058909:intron | 45.0% | |
AATCGCGCCAAGATTCAACA+AGG | - | 57395:23173-23192 | MS.gene058909:intron | 45.0% | |
ACACCTCAATGCTAACCTGA+AGG | + | 57395:23066-23085 | None:intergenic | 45.0% | |
AGCTGTGAACCATCTTCTCA+AGG | - | 57395:22137-22156 | MS.gene058909:intron | 45.0% | |
AGGCACAGTAAGAATGACAC+AGG | - | 57395:24352-24371 | MS.gene058909:intron | 45.0% | |
ATGGAGGGGATGATATGGAA+TGG | - | 57395:24021-24040 | MS.gene058909:intron | 45.0% | |
CAACACAAAGCCTATGCTTG+TGG | - | 57395:23369-23388 | MS.gene058909:intron | 45.0% | |
CACCAACCGTCTTGCTAAAT+CGG | - | 57395:22050-22069 | MS.gene058909:intron | 45.0% | |
CAGAAGCTAGACAGCATGAA+TGG | - | 57395:22497-22516 | MS.gene058909:CDS | 45.0% | |
CATCTGATGCCGAAAACATG+TGG | + | 57395:21226-21245 | None:intergenic | 45.0% | |
CCTGGTGAGATGTCTCAAAA+AGG | + | 57395:22803-22822 | None:intergenic | 45.0% | |
CTTGTATGGAGGGGATGATA+TGG | - | 57395:24016-24035 | MS.gene058909:intron | 45.0% | |
GACTGCAATCAATGATGCCA+TGG | - | 57395:23278-23297 | MS.gene058909:CDS | 45.0% | |
GATCCGTTGCCATTGTTTGA+TGG | - | 57395:22864-22883 | MS.gene058909:intron | 45.0% | |
GCATGCTAATGCATGGAGAT+GGG | + | 57395:21587-21606 | None:intergenic | 45.0% | |
GCCATCTGTCGTCAACATTT+AGG | - | 57395:22539-22558 | MS.gene058909:CDS | 45.0% | |
GGAATTGTTCCATCAACTCC+TGG | + | 57395:24518-24537 | None:intergenic | 45.0% | |
GGCACAGTAAGAATGACACA+GGG | - | 57395:24353-24372 | MS.gene058909:intron | 45.0% | |
GGGATGATATGGAATGGATC+AGG | - | 57395:24027-24046 | MS.gene058909:intron | 45.0% | |
GGGTCATAAACTGAGTACCA+TGG | + | 57395:23298-23317 | None:intergenic | 45.0% | |
GTAAGAATGACACAGGGCAA+AGG | - | 57395:24359-24378 | MS.gene058909:intron | 45.0% | |
TATGTAGGGAAAAGCAACCC+AGG | - | 57395:24110-24129 | MS.gene058909:intron | 45.0% | |
TCAGGTACATTAAGGAGGTG+TGG | - | 57395:23341-23360 | MS.gene058909:intron | 45.0% | |
TCCAAGTATTCCTATGGCTG+TGG | + | 57395:21932-21951 | None:intergenic | 45.0% | |
TCCACTCATCCAACTCATCA+AGG | + | 57395:24403-24422 | None:intergenic | 45.0% | |
TCCTCCCTTAAGCTAGAGAA+AGG | + | 57395:23469-23488 | None:intergenic | 45.0% | |
TCGCCGACCCAACAATAATT+TGG | - | 57395:24189-24208 | MS.gene058909:intron | 45.0% | |
TCTCATCCCTGACATCATTC+AGG | - | 57395:21355-21374 | MS.gene058909:CDS | 45.0% | |
TGCATGCTAATGCATGGAGA+TGG | + | 57395:21588-21607 | None:intergenic | 45.0% | |
TGCTAATGCTATCACCACCT+TGG | + | 57395:21980-21999 | None:intergenic | 45.0% | |
! | AACCGATTTAGCAAGACGGT+TGG | + | 57395:22055-22074 | None:intergenic | 45.0% |
! | AAGGCTCCCTTTTCCACAAT+TGG | + | 57395:23229-23248 | None:intergenic | 45.0% |
! | AGCTATGCGCCACATGTTTT+CGG | - | 57395:21214-21233 | MS.gene058909:CDS | 45.0% |
! | GATGAGTTGGATGAGTGGAA+GGG | - | 57395:24404-24423 | MS.gene058909:intron | 45.0% |
! | GTCTAGCTTCTGAGTCAAAC+TGG | + | 57395:22489-22508 | None:intergenic | 45.0% |
! | TCAACGTTTCAGGTGCTTCA+TGG | + | 57395:22224-22243 | None:intergenic | 45.0% |
! | TCATTGTTTCAGGTAACGGC+AGG | - | 57395:23981-24000 | MS.gene058909:intron | 45.0% |
! | TCCTTTCTCTAGCTTAAGGG+AGG | - | 57395:23465-23484 | MS.gene058909:CDS | 45.0% |
! | TCTTGCAAGTGTATGATGGG+TGG | - | 57395:21892-21911 | MS.gene058909:intron | 45.0% |
! | TGATGAGTTGGATGAGTGGA+AGG | - | 57395:24403-24422 | MS.gene058909:intron | 45.0% |
!! | AGATGGCGAGCTGATTTTGA+AGG | + | 57395:22526-22545 | None:intergenic | 45.0% |
!! | AGGTTAGCATTGAGGTGTTG+AGG | - | 57395:23068-23087 | MS.gene058909:intron | 45.0% |
!! | AGTCTATCTTTAGGACGGTG+AGG | + | 57395:23703-23722 | None:intergenic | 45.0% |
!! | CTTGCAAGTGTATGATGGGT+GGG | - | 57395:21893-21912 | MS.gene058909:intron | 45.0% |
!! | GGTGCAAATGGGTGTCATTA+AGG | - | 57395:21479-21498 | MS.gene058909:CDS | 45.0% |
!! | TTGCAAGTGTATGATGGGTG+GGG | - | 57395:21894-21913 | MS.gene058909:intron | 45.0% |
!!! | CCTTTTTGAGACATCTCACC+AGG | - | 57395:22800-22819 | MS.gene058909:intron | 45.0% |
!!! | CTGTTTTGTTTCGGTCCACA+AGG | + | 57395:23248-23267 | None:intergenic | 45.0% |
!!! | CTTTTGGGATCCAGATTCCA+TGG | - | 57395:23770-23789 | MS.gene058909:CDS | 45.0% |
AAGCCAGAATTCCCCTAGGT+TGG | + | 57395:22013-22032 | None:intergenic | 50.0% | |
ACAGGGAAAGCAGGTGCAAA+TGG | - | 57395:21467-21486 | MS.gene058909:CDS | 50.0% | |
AGCATTTGCAGCCAACCTAG+GGG | - | 57395:21999-22018 | MS.gene058909:intron | 50.0% | |
CAGCATTTGCAGCCAACCTA+GGG | - | 57395:21998-22017 | MS.gene058909:intron | 50.0% | |
CAGGGAAAGCAGGTGCAAAT+GGG | - | 57395:21468-21487 | MS.gene058909:CDS | 50.0% | |
CCATCTTCTCAAGGCCATGT+TGG | - | 57395:22146-22165 | MS.gene058909:intron | 50.0% | |
CGATTTAGCAAGACGGTTGG+TGG | + | 57395:22052-22071 | None:intergenic | 50.0% | |
CTACAAGCCAGAATTCCCCT+AGG | + | 57395:22017-22036 | None:intergenic | 50.0% | |
CTATTCATGGGATGCCAAGG+TGG | - | 57395:21963-21982 | MS.gene058909:intron | 50.0% | |
GATGTGGATTTGGGGAAGCA+TGG | - | 57395:23438-23457 | MS.gene058909:intron | 50.0% | |
GATTGTCCGGTCTAAATCGG+TGG | + | 57395:23896-23915 | None:intergenic | 50.0% | |
GCCACAGCCATAGGAATACT+TGG | - | 57395:21928-21947 | MS.gene058909:intron | 50.0% | |
GCTAATGCATGGAGATGGGA+GGG | + | 57395:21583-21602 | None:intergenic | 50.0% | |
GCTTAAGGGAGGAAGCTCTT+TGG | - | 57395:23476-23495 | MS.gene058909:CDS | 50.0% | |
GGATCCAACACCACAAGCAT+AGG | + | 57395:23382-23401 | None:intergenic | 50.0% | |
GTGGAAGCAGTCAACGTTTC+AGG | + | 57395:22234-22253 | None:intergenic | 50.0% | |
TGCGTCACGCAATTACTGCA+TGG | - | 57395:23928-23947 | MS.gene058909:intron | 50.0% | |
TGCTAATGCATGGAGATGGG+AGG | + | 57395:21584-21603 | None:intergenic | 50.0% | |
TTGTGGAAAAGGGAGCCTTG+TGG | - | 57395:23230-23249 | MS.gene058909:intron | 50.0% | |
! | CCAACATGGCCTTGAGAAGA+TGG | + | 57395:22149-22168 | None:intergenic | 50.0% |
! | CTGCCTTCAGGTTAGCATTG+AGG | - | 57395:23060-23079 | MS.gene058909:intron | 50.0% |
! | CTTGTGGTGTTGGATCCACA+GGG | - | 57395:23385-23404 | MS.gene058909:intron | 50.0% |
! | GCCTTGATGAGTTGGATGAG+TGG | - | 57395:24399-24418 | MS.gene058909:intron | 50.0% |
! | GCTCTAGATTGGTTCTTCCG+TGG | + | 57395:21197-21216 | None:intergenic | 50.0% |
! | GGGTTAGGCTTGAAAGCATG+TGG | - | 57395:24219-24238 | MS.gene058909:CDS | 50.0% |
! | TTGTGGTGTTGGATCCACAG+GGG | - | 57395:23386-23405 | MS.gene058909:intron | 50.0% |
!! | GCATCATTGGCTTGGGTCAA+GGG | - | 57395:22319-22338 | MS.gene058909:CDS | 50.0% |
!! | TCTTGGCCACCGATTTAGAC+CGG | - | 57395:23887-23906 | MS.gene058909:intron | 50.0% |
!! | TGCAAGTGTATGATGGGTGG+GGG | - | 57395:21895-21914 | MS.gene058909:intron | 50.0% |
!! | TGTGGCGCATAGCTCTAGAT+TGG | + | 57395:21208-21227 | None:intergenic | 50.0% |
AGGTTCACAACCTTCCCCTG+TGG | + | 57395:23403-23422 | None:intergenic | 55.0% | |
CAATTGGAGCATGAGTGGCG+CGG | + | 57395:21271-21290 | None:intergenic | 55.0% | |
CAGCCAACCTAGGGGAATTC+TGG | - | 57395:22007-22026 | MS.gene058909:intron | 55.0% | |
CAGGGATGAGAGAAGCTGCA+TGG | + | 57395:21346-21365 | None:intergenic | 55.0% | |
GATGCTCATGCCACAGCCAT+AGG | - | 57395:21919-21938 | MS.gene058909:intron | 55.0% | |
GCAGCATTTGCAGCCAACCT+AGG | - | 57395:21997-22016 | MS.gene058909:intron | 55.0% | |
! | GCTTGTGGTGTTGGATCCAC+AGG | - | 57395:23384-23403 | MS.gene058909:intron | 55.0% |
!! | GGCATCATTGGCTTGGGTCA+AGG | - | 57395:22318-22337 | MS.gene058909:CDS | 55.0% |
!! | TGACCCTTCACTTCTGGAGC+CGG | - | 57395:23312-23331 | MS.gene058909:CDS | 55.0% |
!! | TTCTGGAGCCGGCAAGTATC+AGG | - | 57395:23323-23342 | MS.gene058909:intron | 55.0% |
!! | TTGCCGGCTCCAGAAGTGAA+GGG | + | 57395:23318-23337 | None:intergenic | 55.0% |
TGCTGAGTGTGGCCAGCCAA+TGG | - | 57395:24553-24572 | MS.gene058909:CDS | 60.0% | |
! | GGTGTTGGATCCACAGGGGA+AGG | - | 57395:23390-23409 | MS.gene058909:intron | 60.0% |
!! | CTTGCCGGCTCCAGAAGTGA+AGG | + | 57395:23319-23338 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
57395 | gene | 21182 | 24610 | 21182 | ID=MS.gene058909 |
57395 | mRNA | 21182 | 24610 | 21182 | ID=MS.gene058909.t1;Parent=MS.gene058909 |
57395 | exon | 24416 | 24610 | 24416 | ID=MS.gene058909.t1.exon1;Parent=MS.gene058909.t1 |
57395 | CDS | 24416 | 24610 | 24416 | ID=cds.MS.gene058909.t1;Parent=MS.gene058909.t1 |
57395 | exon | 24217 | 24321 | 24217 | ID=MS.gene058909.t1.exon2;Parent=MS.gene058909.t1 |
57395 | CDS | 24217 | 24321 | 24217 | ID=cds.MS.gene058909.t1;Parent=MS.gene058909.t1 |
57395 | exon | 23452 | 23903 | 23452 | ID=MS.gene058909.t1.exon3;Parent=MS.gene058909.t1 |
57395 | CDS | 23452 | 23903 | 23452 | ID=cds.MS.gene058909.t1;Parent=MS.gene058909.t1 |
57395 | exon | 23232 | 23341 | 23232 | ID=MS.gene058909.t1.exon4;Parent=MS.gene058909.t1 |
57395 | CDS | 23232 | 23341 | 23232 | ID=cds.MS.gene058909.t1;Parent=MS.gene058909.t1 |
57395 | exon | 22890 | 23032 | 22890 | ID=MS.gene058909.t1.exon5;Parent=MS.gene058909.t1 |
57395 | CDS | 22890 | 23032 | 22890 | ID=cds.MS.gene058909.t1;Parent=MS.gene058909.t1 |
57395 | exon | 22231 | 22722 | 22231 | ID=MS.gene058909.t1.exon6;Parent=MS.gene058909.t1 |
57395 | CDS | 22231 | 22722 | 22231 | ID=cds.MS.gene058909.t1;Parent=MS.gene058909.t1 |
57395 | exon | 21182 | 21799 | 21182 | ID=MS.gene058909.t1.exon7;Parent=MS.gene058909.t1 |
57395 | CDS | 21182 | 21799 | 21182 | ID=cds.MS.gene058909.t1;Parent=MS.gene058909.t1 |
Gene Sequence |
Protein sequence |