Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058912.t1 | XP_013446714.1 | 98 | 704 | 14 | 0 | 1 | 704 | 1 | 704 | 0.00E+00 | 1412.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058912.t1 | Q9SS87 | 40.0 | 720 | 400 | 14 | 1 | 704 | 26 | 729 | 3.6e-150 | 533.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058912.t1 | A0A072TU76 | 98.0 | 704 | 14 | 0 | 1 | 704 | 1 | 704 | 0.0e+00 | 1412.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049418 | MS.gene058912 | 0.813107 | 3.03E-51 | -1.69E-46 |
MS.gene049696 | MS.gene058912 | 0.803988 | 2.68E-49 | -1.69E-46 |
MS.gene049698 | MS.gene058912 | 0.842071 | 3.23E-58 | -1.69E-46 |
MS.gene05017 | MS.gene058912 | 0.818407 | 1.99E-52 | -1.69E-46 |
MS.gene054118 | MS.gene058912 | 0.839552 | 1.48E-57 | -1.69E-46 |
MS.gene055371 | MS.gene058912 | 0.834057 | 3.73E-56 | -1.69E-46 |
MS.gene058351 | MS.gene058912 | 0.817973 | 2.50E-52 | -1.69E-46 |
MS.gene058823 | MS.gene058912 | 0.816605 | 5.07E-52 | -1.69E-46 |
MS.gene058909 | MS.gene058912 | 0.997742 | 2.80E-248 | -1.69E-46 |
MS.gene058912 | MS.gene05894 | 0.811336 | 7.37E-51 | -1.69E-46 |
MS.gene058912 | MS.gene061567 | 0.824311 | 8.65E-54 | -1.69E-46 |
MS.gene058912 | MS.gene064754 | 0.840339 | 9.23E-58 | -1.69E-46 |
MS.gene058912 | MS.gene065544 | 0.80396 | 2.72E-49 | -1.69E-46 |
MS.gene058912 | MS.gene065979 | 0.829707 | 4.43E-55 | -1.69E-46 |
MS.gene058912 | MS.gene065981 | 0.801599 | 8.34E-49 | -1.69E-46 |
MS.gene058912 | MS.gene066929 | 0.838323 | 3.08E-57 | -1.69E-46 |
MS.gene058912 | MS.gene067270 | 0.853358 | 2.52E-61 | -1.69E-46 |
MS.gene058912 | MS.gene067271 | 0.857132 | 2.01E-62 | -1.69E-46 |
MS.gene058912 | MS.gene06793 | 0.821577 | 3.75E-53 | -1.69E-46 |
MS.gene058912 | MS.gene068306 | 0.804456 | 2.14E-49 | -1.69E-46 |
MS.gene058912 | MS.gene07246 | 0.81659 | 5.11E-52 | -1.69E-46 |
MS.gene058912 | MS.gene073454 | 0.806627 | 7.50E-50 | -1.69E-46 |
MS.gene058912 | MS.gene08339 | 0.820154 | 7.97E-53 | -1.69E-46 |
MS.gene058912 | MS.gene08679 | 0.803528 | 3.34E-49 | -1.69E-46 |
MS.gene058912 | MS.gene09973 | 0.811205 | 7.87E-51 | -1.69E-46 |
MS.gene058912 | MS.gene20276 | 0.800031 | 1.74E-48 | -1.69E-46 |
MS.gene058912 | MS.gene20903 | 0.818727 | 1.69E-52 | -1.69E-46 |
MS.gene058912 | MS.gene21391 | 0.801849 | 7.41E-49 | -1.69E-46 |
MS.gene058912 | MS.gene22148 | 0.865466 | 5.79E-65 | -1.69E-46 |
MS.gene058912 | MS.gene25966 | 0.88559 | 7.13E-72 | -1.69E-46 |
MS.gene058912 | MS.gene27860 | 0.838457 | 2.84E-57 | -1.69E-46 |
MS.gene058912 | MS.gene27862 | 0.811498 | 6.80E-51 | -1.69E-46 |
MS.gene058912 | MS.gene27994 | 0.808057 | 3.73E-50 | -1.69E-46 |
MS.gene058912 | MS.gene29077 | 0.85159 | 8.04E-61 | -1.69E-46 |
MS.gene058912 | MS.gene29358 | 0.875434 | 3.09E-68 | -1.69E-46 |
MS.gene058912 | MS.gene29884 | 0.863701 | 2.06E-64 | -1.69E-46 |
MS.gene058912 | MS.gene31803 | 0.829392 | 5.28E-55 | -1.69E-46 |
MS.gene058912 | MS.gene32360 | 0.841643 | 4.19E-58 | -1.69E-46 |
MS.gene058912 | MS.gene34943 | 0.859779 | 3.27E-63 | -1.69E-46 |
MS.gene058912 | MS.gene34953 | 0.824364 | 8.40E-54 | -1.69E-46 |
MS.gene058912 | MS.gene35007 | 0.844739 | 6.27E-59 | -1.69E-46 |
MS.gene058912 | MS.gene37852 | 0.8301 | 3.55E-55 | -1.69E-46 |
MS.gene058912 | MS.gene38763 | 0.831038 | 2.09E-55 | -1.69E-46 |
MS.gene058912 | MS.gene39843 | 0.810691 | 1.02E-50 | -1.69E-46 |
MS.gene058912 | MS.gene39845 | 0.805622 | 1.22E-49 | -1.69E-46 |
MS.gene058912 | MS.gene42263 | 0.818686 | 1.72E-52 | -1.69E-46 |
MS.gene058912 | MS.gene42334 | 0.801759 | 7.74E-49 | -1.69E-46 |
MS.gene058912 | MS.gene44375 | 0.820963 | 5.20E-53 | -1.69E-46 |
MS.gene058912 | MS.gene47958 | 0.997376 | 1.88E-241 | -1.69E-46 |
MS.gene058912 | MS.gene47960 | 0.996801 | 2.03E-232 | -1.69E-46 |
MS.gene058912 | MS.gene47963 | 0.986899 | 2.34E-168 | -1.69E-46 |
MS.gene058912 | MS.gene51520 | 0.825791 | 3.87E-54 | -1.69E-46 |
MS.gene058912 | MS.gene51531 | 0.81493 | 1.20E-51 | -1.69E-46 |
MS.gene058912 | MS.gene53003 | 0.849294 | 3.55E-60 | -1.69E-46 |
MS.gene058912 | MS.gene53004 | 0.808747 | 2.66E-50 | -1.69E-46 |
MS.gene058912 | MS.gene53376 | 0.838829 | 2.28E-57 | -1.69E-46 |
MS.gene058912 | MS.gene53481 | 0.822121 | 2.81E-53 | -1.69E-46 |
MS.gene058912 | MS.gene54652 | 0.812436 | 4.24E-51 | -1.69E-46 |
MS.gene058912 | MS.gene56186 | 0.817927 | 2.56E-52 | -1.69E-46 |
MS.gene058912 | MS.gene56487 | 0.818533 | 1.87E-52 | -1.69E-46 |
MS.gene058912 | MS.gene57072 | 0.807571 | 4.74E-50 | -1.69E-46 |
MS.gene058912 | MS.gene57665 | 0.801446 | 8.97E-49 | -1.69E-46 |
MS.gene058912 | MS.gene58836 | 0.810369 | 1.19E-50 | -1.69E-46 |
MS.gene058912 | MS.gene59879 | 0.846463 | 2.14E-59 | -1.69E-46 |
MS.gene058912 | MS.gene59880 | 0.838765 | 2.37E-57 | -1.69E-46 |
MS.gene058912 | MS.gene61572 | 0.82897 | 6.68E-55 | -1.69E-46 |
MS.gene058912 | MS.gene62603 | 0.854131 | 1.51E-61 | -1.69E-46 |
MS.gene058912 | MS.gene62780 | 0.850238 | 1.93E-60 | -1.69E-46 |
MS.gene058912 | MS.gene64560 | 0.817879 | 2.62E-52 | -1.69E-46 |
MS.gene058912 | MS.gene68650 | 0.806009 | 1.01E-49 | -1.69E-46 |
MS.gene058912 | MS.gene68652 | 0.810766 | 9.79E-51 | -1.69E-46 |
MS.gene058912 | MS.gene68949 | 0.80005 | 1.73E-48 | -1.69E-46 |
MS.gene058912 | MS.gene69404 | 0.842273 | 2.86E-58 | -1.69E-46 |
MS.gene058912 | MS.gene70711 | 0.850697 | 1.44E-60 | -1.69E-46 |
MS.gene058912 | MS.gene71459 | 0.886439 | 3.42E-72 | -1.69E-46 |
MS.gene058912 | MS.gene71460 | 0.883782 | 3.35E-71 | -1.69E-46 |
MS.gene058912 | MS.gene71461 | 0.813261 | 2.80E-51 | -1.69E-46 |
MS.gene058912 | MS.gene73497 | 0.81459 | 1.43E-51 | -1.69E-46 |
MS.gene058912 | MS.gene75180 | 0.836234 | 1.05E-56 | -1.69E-46 |
MS.gene058912 | MS.gene75220 | 0.862959 | 3.50E-64 | -1.69E-46 |
MS.gene058912 | MS.gene76991 | 0.840337 | 9.24E-58 | -1.69E-46 |
MS.gene058912 | MS.gene80266 | 0.836046 | 1.18E-56 | -1.69E-46 |
MS.gene058912 | MS.gene80867 | 0.812348 | 4.43E-51 | -1.69E-46 |
MS.gene058912 | MS.gene82359 | 0.828215 | 1.02E-54 | -1.69E-46 |
MS.gene058912 | MS.gene84497 | 0.857147 | 1.99E-62 | -1.69E-46 |
MS.gene058912 | MS.gene90610 | 0.800052 | 1.73E-48 | -1.69E-46 |
MS.gene058912 | MS.gene91794 | 0.822294 | 2.56E-53 | -1.69E-46 |
MS.gene058912 | MS.gene95227 | 0.8002 | 1.61E-48 | -1.69E-46 |
MS.gene058912 | MS.gene96235 | 0.899183 | 2.55E-77 | -1.69E-46 |
MS.gene058912 | MS.gene99415 | 0.806685 | 7.30E-50 | -1.69E-46 |
MS.gene058912 | MS.gene99526 | 0.806752 | 7.06E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058912.t1 | MTR_8g089660 | 98.011 | 704 | 14 | 0 | 1 | 704 | 1 | 704 | 0.0 | 1444 |
MS.gene058912.t1 | MTR_3g075450 | 52.991 | 702 | 316 | 8 | 7 | 704 | 15 | 706 | 0.0 | 745 |
MS.gene058912.t1 | MTR_7g032660 | 43.723 | 693 | 375 | 11 | 20 | 704 | 26 | 711 | 0.0 | 570 |
MS.gene058912.t1 | MTR_1g074950 | 32.521 | 698 | 402 | 20 | 17 | 703 | 23 | 662 | 1.70e-105 | 336 |
MS.gene058912.t1 | MTR_1g074990 | 31.746 | 693 | 413 | 23 | 17 | 703 | 22 | 660 | 3.32e-100 | 322 |
MS.gene058912.t1 | MTR_1g075095 | 31.124 | 694 | 418 | 23 | 17 | 703 | 22 | 662 | 3.14e-96 | 311 |
MS.gene058912.t1 | MTR_1g075230 | 30.914 | 689 | 419 | 21 | 22 | 704 | 26 | 663 | 8.34e-95 | 308 |
MS.gene058912.t1 | MTR_1g075030 | 30.836 | 694 | 420 | 23 | 17 | 703 | 22 | 662 | 3.05e-94 | 306 |
MS.gene058912.t1 | MTR_1g040360 | 29.014 | 710 | 416 | 24 | 20 | 703 | 30 | 677 | 1.06e-77 | 263 |
MS.gene058912.t1 | MTR_1g075170 | 25.301 | 664 | 369 | 25 | 88 | 704 | 84 | 667 | 3.09e-47 | 178 |
MS.gene058912.t1 | MTR_1g075180 | 27.202 | 647 | 372 | 24 | 87 | 704 | 60 | 636 | 1.11e-46 | 176 |
MS.gene058912.t1 | MTR_1g075153 | 25.645 | 620 | 396 | 19 | 101 | 704 | 93 | 663 | 3.26e-44 | 169 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058912.t1 | AT3G01680 | 39.973 | 728 | 389 | 14 | 1 | 704 | 26 | 729 | 0.0 | 540 |
MS.gene058912.t1 | AT3G01670 | 37.260 | 730 | 401 | 14 | 5 | 704 | 120 | 822 | 2.49e-156 | 473 |
MS.gene058912.t1 | AT3G01670 | 37.260 | 730 | 401 | 14 | 5 | 704 | 144 | 846 | 6.50e-156 | 473 |
MS.gene058912.t1 | AT1G67790 | 27.273 | 704 | 454 | 20 | 13 | 700 | 3 | 664 | 2.79e-74 | 253 |
Find 0 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAAGATCAAAAGTTAAA+TGG | + | 57393:6296-6315 | None:intergenic | 15.0% |
!!! | AGTATAATAATTGTTCTTTT+GGG | - | 57393:6315-6334 | MS.gene058912:CDS | 15.0% |
!!! | TAGTATAATAATTGTTCTTT+TGG | - | 57393:6314-6333 | MS.gene058912:CDS | 15.0% |
!! | ATATAGAGAATGAAAAACAT+AGG | + | 57393:6131-6150 | None:intergenic | 20.0% |
!! | ATCTTATTATTCATTGTTTC+AGG | - | 57393:6531-6550 | MS.gene058912:intron | 20.0% |
!! | GAATAATAAGATCAAAAGAA+CGG | + | 57393:6523-6542 | None:intergenic | 20.0% |
!! | TTATAACAGACTTTATGAAT+CGG | + | 57393:6420-6439 | None:intergenic | 20.0% |
!!! | AACATTAAGATATTTGTTGT+TGG | + | 57393:4943-4962 | None:intergenic | 20.0% |
!!! | ATCTAGTTCTAGAAAATATT+CGG | + | 57393:4384-4403 | None:intergenic | 20.0% |
!!! | TCATTATTTCTAGCATTATT+TGG | + | 57393:6843-6862 | None:intergenic | 20.0% |
!!! | TTGTTTTGAAATTTTACACA+GGG | - | 57393:4010-4029 | MS.gene058912:CDS | 20.0% |
! | AATGTTATCAAGCTATTCAT+GGG | - | 57393:4511-4530 | MS.gene058912:intron | 25.0% |
! | AATTAACAAAATTTCATGCG+AGG | - | 57393:4114-4133 | MS.gene058912:CDS | 25.0% |
! | AGAAGAACCAAATTATTGTT+GGG | + | 57393:6759-6778 | None:intergenic | 25.0% |
! | ATTTAAACATGTAATTCCCA+TGG | + | 57393:6350-6369 | None:intergenic | 25.0% |
! | CAATATTGTCACTCATATTT+GGG | + | 57393:4322-4341 | None:intergenic | 25.0% |
! | CTTTGATTGCTAAAATATAG+CGG | - | 57393:5131-5150 | MS.gene058912:CDS | 25.0% |
! | GTTAATTAACTATGTGTTTG+TGG | - | 57393:3987-4006 | MS.gene058912:CDS | 25.0% |
! | TCAATATTGTCACTCATATT+TGG | + | 57393:4323-4342 | None:intergenic | 25.0% |
! | TCTGTTATAAACAATCTTCT+TGG | - | 57393:6430-6449 | MS.gene058912:CDS | 25.0% |
!! | AAAGTCAATATGAACTTGTT+TGG | - | 57393:5760-5779 | MS.gene058912:intron | 25.0% |
!! | TTATTCATTGTTTCAGGTAA+CGG | - | 57393:6537-6556 | MS.gene058912:intron | 25.0% |
!!! | AACAATAATTTGGTTCTTCT+GGG | - | 57393:6759-6778 | MS.gene058912:intron | 25.0% |
!!! | CTAAATCAAGTTGATGATTT+AGG | - | 57393:4662-4681 | MS.gene058912:intron | 25.0% |
!!! | GTTGTTTTGAAATTTTACAC+AGG | - | 57393:4009-4028 | MS.gene058912:CDS | 25.0% |
!!! | TGTTTTGCTTTGTTGTAATT+TGG | + | 57393:6809-6828 | None:intergenic | 25.0% |
AAATACATATGCTTGTATGG+AGG | - | 57393:6565-6584 | MS.gene058912:intron | 30.0% | |
AATACATATGCTTGTATGGA+GGG | - | 57393:6566-6585 | MS.gene058912:intron | 30.0% | |
ACATCAACATGTTCTTCAAT+TGG | + | 57393:3847-3866 | None:intergenic | 30.0% | |
ATATCTTGCAAGTGTATGAT+GGG | - | 57393:4449-4468 | MS.gene058912:intron | 30.0% | |
ATTAACCTGTTACAATGATG+TGG | + | 57393:7051-7070 | None:intergenic | 30.0% | |
ATTACAACAAAGCAAAACAG+TGG | - | 57393:6810-6829 | MS.gene058912:CDS | 30.0% | |
CAGAAGAACCAAATTATTGT+TGG | + | 57393:6760-6779 | None:intergenic | 30.0% | |
CGTCAACATTTAGGTAATTA+AGG | - | 57393:5108-5127 | MS.gene058912:CDS | 30.0% | |
GAATGTTATCAAGCTATTCA+TGG | - | 57393:4510-4529 | MS.gene058912:intron | 30.0% | |
GAGCTTGTAGAAACAATTTA+CGG | + | 57393:4298-4317 | None:intergenic | 30.0% | |
GCATAACCAAACTAATAAAG+TGG | - | 57393:6166-6185 | MS.gene058912:CDS | 30.0% | |
TAAATATGCATGCTAATGCA+TGG | + | 57393:4154-4173 | None:intergenic | 30.0% | |
TAACATTCCAAGTATTCCTA+TGG | + | 57393:4498-4517 | None:intergenic | 30.0% | |
TCTTGAACAACATTAAGTAG+AGG | + | 57393:3874-3893 | None:intergenic | 30.0% | |
TGATCCATTACTCTTTGATT+GGG | - | 57393:6100-6119 | MS.gene058912:CDS | 30.0% | |
TGTTACAAAAAATGCATTGC+CGG | - | 57393:4349-4368 | MS.gene058912:intron | 30.0% | |
TTAGAACCTTAATGTTATCC+TGG | + | 57393:5381-5400 | None:intergenic | 30.0% | |
TTGATCCATTACTCTTTGAT+TGG | - | 57393:6099-6118 | MS.gene058912:CDS | 30.0% | |
TTTCTAACCTTGTTGAATCT+TGG | + | 57393:5743-5762 | None:intergenic | 30.0% | |
! | ACACTGTATGGTTTTTCTTT+AGG | - | 57393:5252-5271 | MS.gene058912:CDS | 30.0% |
! | AGTTAGCCACTTTATTAGTT+TGG | + | 57393:6175-6194 | None:intergenic | 30.0% |
! | CGTAGTATCATTATGCTTTT+TGG | - | 57393:3962-3981 | MS.gene058912:CDS | 30.0% |
! | TACATGTAGAACTTTTCCAT+TGG | + | 57393:7132-7151 | None:intergenic | 30.0% |
! | TCCAGTAACTAAATTGACTT+AGG | + | 57393:5188-5207 | None:intergenic | 30.0% |
! | TCTTTGGAAAGATGAAACAT+GGG | - | 57393:6052-6071 | MS.gene058912:CDS | 30.0% |
! | TTATCCTTTCTCTAGCTTAA+GGG | - | 57393:6022-6041 | MS.gene058912:CDS | 30.0% |
!! | ATAATCATTTTTCTGCCTTC+AGG | - | 57393:5608-5627 | MS.gene058912:intron | 30.0% |
!! | CAACAATAATTTGGTTCTTC+TGG | - | 57393:6758-6777 | MS.gene058912:intron | 30.0% |
!! | TTATTCCTAGTGCTGTTTAT+TGG | - | 57393:4816-4835 | MS.gene058912:CDS | 30.0% |
!!! | AAATATTCGGTTTTTAGTGC+CGG | + | 57393:4371-4390 | None:intergenic | 30.0% |
!!! | AGTTGCTAATTTTGATTGTC+CGG | + | 57393:6469-6488 | None:intergenic | 30.0% |
!!! | ATTCTTTTAACTTTCTGTCC+TGG | + | 57393:6691-6710 | None:intergenic | 30.0% |
!!! | CTCAAACTTCTGTTTTGTTT+CGG | + | 57393:5817-5836 | None:intergenic | 30.0% |
!!! | TTCTTTTAACTTTCTGTCCT+GGG | + | 57393:6690-6709 | None:intergenic | 30.0% |
AACAACCACATCATTGTAAC+AGG | - | 57393:7043-7062 | MS.gene058912:CDS | 35.0% | |
AACTGTCGTGTATTTGATGA+AGG | + | 57393:6230-6249 | None:intergenic | 35.0% | |
AAGAACTCTACAAATTCCAC+TGG | - | 57393:6639-6658 | MS.gene058912:intron | 35.0% | |
AAGGGTGATGTGAATGATAA+AGG | - | 57393:6982-7001 | MS.gene058912:CDS | 35.0% | |
AAGTATCAGGTACATTAAGG+AGG | - | 57393:5896-5915 | MS.gene058912:intron | 35.0% | |
ACTTGTTTGGATTCCAATTG+TGG | - | 57393:5773-5792 | MS.gene058912:intron | 35.0% | |
AGTACACATGATGTGGATTT+GGG | - | 57393:5989-6008 | MS.gene058912:intron | 35.0% | |
ATACATATGCTTGTATGGAG+GGG | - | 57393:6567-6586 | MS.gene058912:intron | 35.0% | |
ATCTCACCAGGATAACATTA+AGG | - | 57393:5372-5391 | MS.gene058912:intron | 35.0% | |
CAACCTCTTGATCAGATATA+TGG | + | 57393:5689-5708 | None:intergenic | 35.0% | |
CACTGGAAATGATGTATGTA+GGG | - | 57393:6656-6675 | MS.gene058912:intron | 35.0% | |
CATCTGCATCGTAACATATT+TGG | + | 57393:5303-5322 | None:intergenic | 35.0% | |
CTAACCCAATCAAAGAGTAA+TGG | + | 57393:6107-6126 | None:intergenic | 35.0% | |
GAACCAAATTATTGTTGGGT+CGG | + | 57393:6755-6774 | None:intergenic | 35.0% | |
GATATCTTGCAAGTGTATGA+TGG | - | 57393:4448-4467 | MS.gene058912:intron | 35.0% | |
GCAATGGATGATTACATACA+AGG | - | 57393:7015-7034 | MS.gene058912:CDS | 35.0% | |
GCCTAAGTCAATTTAGTTAC+TGG | - | 57393:5184-5203 | MS.gene058912:CDS | 35.0% | |
GCTATTGTCATAAGCTATCT+TGG | - | 57393:4232-4251 | MS.gene058912:CDS | 35.0% | |
GGCAAATACATATGCTTGTA+TGG | - | 57393:6562-6581 | MS.gene058912:intron | 35.0% | |
GTCCTAAAGATAGACTGATA+GGG | - | 57393:6267-6286 | MS.gene058912:CDS | 35.0% | |
GTGTATTTGATGAAGGAGAA+AGG | + | 57393:6223-6242 | None:intergenic | 35.0% | |
GTGTGTTAATCATGAAGATG+AGG | - | 57393:5224-5243 | MS.gene058912:CDS | 35.0% | |
TCCTAAAGATAGACTGATAG+GGG | - | 57393:6268-6287 | MS.gene058912:CDS | 35.0% | |
TGGATTCCAATTGTGGAAAA+GGG | - | 57393:5780-5799 | MS.gene058912:intron | 35.0% | |
TGTAACAGGTTAATACTTCC+AGG | - | 57393:7057-7076 | MS.gene058912:CDS | 35.0% | |
TGTATGTAATCATCCATTGC+AGG | + | 57393:7015-7034 | None:intergenic | 35.0% | |
TGTTACAATGATGTGGTTGT+TGG | + | 57393:7044-7063 | None:intergenic | 35.0% | |
TTAATACTTCCAGGAGTTGA+TGG | - | 57393:7066-7085 | MS.gene058912:CDS | 35.0% | |
TTAATGTACCTGATACTTGC+CGG | + | 57393:5894-5913 | None:intergenic | 35.0% | |
TTGGATTCCAATTGTGGAAA+AGG | - | 57393:5779-5798 | MS.gene058912:intron | 35.0% | |
TTGGTAGAACCATCAAACAA+TGG | + | 57393:5436-5455 | None:intergenic | 35.0% | |
TTTGATTGTCCGGTCTAAAT+CGG | + | 57393:6459-6478 | None:intergenic | 35.0% | |
! | AAATTTTACACAGGGAAAGC+AGG | - | 57393:4018-4037 | MS.gene058912:CDS | 35.0% |
! | CTATCAGTCTATCTTTAGGA+CGG | + | 57393:6268-6287 | None:intergenic | 35.0% |
! | CTCTTTGGAAAGATGAAACA+TGG | - | 57393:6051-6070 | MS.gene058912:CDS | 35.0% |
! | CTTATCCTTTCTCTAGCTTA+AGG | - | 57393:6021-6040 | MS.gene058912:CDS | 35.0% |
! | CTTTGGAAAGATGAAACATG+GGG | - | 57393:6053-6072 | MS.gene058912:CDS | 35.0% |
! | GCTCAGATTTTCGTCATATA+TGG | + | 57393:6722-6741 | None:intergenic | 35.0% |
! | TTTAAAGTGCCTTGATGAGT+TGG | - | 57393:6951-6970 | MS.gene058912:intron | 35.0% |
!! | AAGATATTTGTTGTTGGTGC+AGG | + | 57393:4937-4956 | None:intergenic | 35.0% |
!! | TAATTTGGTTCTTCTGGGTT+AGG | - | 57393:6764-6783 | MS.gene058912:intron | 35.0% |
!! | TGCTAAAATATAGCGGATAG+CGG | - | 57393:5138-5157 | MS.gene058912:CDS | 35.0% |
AACAGCACTAGGAATAAGAG+TGG | + | 57393:4813-4832 | None:intergenic | 40.0% | |
AAGATTGTATGTGCTGAGTG+TGG | - | 57393:7102-7121 | MS.gene058912:CDS | 40.0% | |
ACACATACCTGAATGATGTC+AGG | + | 57393:3925-3944 | None:intergenic | 40.0% | |
ACATCATGTGTACTGCATTC+AGG | + | 57393:5983-6002 | None:intergenic | 40.0% | |
ACCTAAATGTTGACGACAGA+TGG | + | 57393:5103-5122 | None:intergenic | 40.0% | |
AGCCAATGATGCCGAAAATA+TGG | + | 57393:4871-4890 | None:intergenic | 40.0% | |
AGTTTATGACCCTTCACTTC+TGG | - | 57393:5866-5885 | MS.gene058912:CDS | 40.0% | |
ATCGTCCAATAAACAGCACT+AGG | + | 57393:4824-4843 | None:intergenic | 40.0% | |
CACATACCTGAATGATGTCA+GGG | + | 57393:3924-3943 | None:intergenic | 40.0% | |
CAGTACACATGATGTGGATT+TGG | - | 57393:5988-6007 | MS.gene058912:intron | 40.0% | |
CATGTAATTCCCATGGAATC+TGG | + | 57393:6343-6362 | None:intergenic | 40.0% | |
CCACCATATATCTGATCAAG+AGG | - | 57393:5683-5702 | MS.gene058912:intron | 40.0% | |
CCACTGGAAATGATGTATGT+AGG | - | 57393:6655-6674 | MS.gene058912:intron | 40.0% | |
CCTACATACATCATTTCCAG+TGG | + | 57393:6658-6677 | None:intergenic | 40.0% | |
CCTCTTGATCAGATATATGG+TGG | + | 57393:5686-5705 | None:intergenic | 40.0% | |
CGTCCTAAAGATAGACTGAT+AGG | - | 57393:6266-6285 | MS.gene058912:CDS | 40.0% | |
CTTGATCAGATATATGGTGG+AGG | + | 57393:5683-5702 | None:intergenic | 40.0% | |
GAACCATCAAACAATGGCAA+CGG | + | 57393:5430-5449 | None:intergenic | 40.0% | |
GACATCAACAACAGAGACAT+GGG | - | 57393:5017-5036 | MS.gene058912:CDS | 40.0% | |
GATCACTGCTATCAAAGCTT+AGG | + | 57393:6870-6889 | None:intergenic | 40.0% | |
GATGAGGAAGAAACACTGTA+TGG | - | 57393:5240-5259 | MS.gene058912:CDS | 40.0% | |
GCAATCAGTAACATCCAACA+TGG | + | 57393:4723-4742 | None:intergenic | 40.0% | |
GCCAATGATGCCGAAAATAT+GGG | + | 57393:4870-4889 | None:intergenic | 40.0% | |
GGCAAGTATCAGGTACATTA+AGG | - | 57393:5893-5912 | MS.gene058912:intron | 40.0% | |
GGTTGGGCTATAATAAGTCA+AGG | - | 57393:6892-6911 | MS.gene058912:intron | 40.0% | |
GTACACATGATGTGGATTTG+GGG | - | 57393:5990-6009 | MS.gene058912:intron | 40.0% | |
GTCAAATAAGTCAGACTCGT+TGG | + | 57393:4071-4090 | None:intergenic | 40.0% | |
TCAGCACATACAATCTTGTC+TGG | + | 57393:7099-7118 | None:intergenic | 40.0% | |
TCCCCTATCAGTCTATCTTT+AGG | + | 57393:6272-6291 | None:intergenic | 40.0% | |
TGAATGCAGTACACATGATG+TGG | - | 57393:5982-6001 | MS.gene058912:intron | 40.0% | |
TGACATCAACAACAGAGACA+TGG | - | 57393:5016-5035 | MS.gene058912:CDS | 40.0% | |
TGATAGCAGTGATCTTGGTT+GGG | - | 57393:6876-6895 | MS.gene058912:intron | 40.0% | |
TGGTTCACAGCTTCGAATTT+AGG | + | 57393:4689-4708 | None:intergenic | 40.0% | |
TTCTATGCTAACCCTTTGCT+TGG | + | 57393:5455-5474 | None:intergenic | 40.0% | |
TTCTTCAATTGGAGCATGAG+TGG | + | 57393:3836-3855 | None:intergenic | 40.0% | |
! | AAAAGCTTTGATTCGCTGCA+AGG | - | 57393:5399-5418 | MS.gene058912:intron | 40.0% |
! | AGCTTTGATAGCAGTGATCT+TGG | - | 57393:6871-6890 | MS.gene058912:intron | 40.0% |
! | ATGCAACCGATTTAGCAAGA+CGG | + | 57393:4619-4638 | None:intergenic | 40.0% |
! | CACAAGTGCTGCAAAATCAA+TGG | - | 57393:6615-6634 | MS.gene058912:intron | 40.0% |
! | GCATGTGCATCCCATATTTT+CGG | - | 57393:4857-4876 | MS.gene058912:CDS | 40.0% |
! | GTTTTCGGCATCAGATGATA+CGG | - | 57393:3789-3808 | MS.gene058912:CDS | 40.0% |
! | TAAAGGAGTTTTGCCTGCAA+TGG | - | 57393:6999-7018 | MS.gene058912:CDS | 40.0% |
! | TCATGGTCAATGTACTGATC+AGG | + | 57393:4767-4786 | None:intergenic | 40.0% |
! | TCCCATATTTTCGGCATCAT+TGG | - | 57393:4866-4885 | MS.gene058912:CDS | 40.0% |
! | TGATGGTTCTACCAAGCAAA+GGG | - | 57393:5441-5460 | MS.gene058912:intron | 40.0% |
! | TGTAGAACTTTTCCATTGGC+TGG | + | 57393:7128-7147 | None:intergenic | 40.0% |
! | TTGATAGCAGTGATCTTGGT+TGG | - | 57393:6875-6894 | MS.gene058912:intron | 40.0% |
! | TTGATGGTTCTACCAAGCAA+AGG | - | 57393:5440-5459 | MS.gene058912:intron | 40.0% |
!! | GTGCTGTTTATTGGACGATT+AGG | - | 57393:4825-4844 | MS.gene058912:CDS | 40.0% |
!! | TATTTTCGGCATCATTGGCT+TGG | - | 57393:4871-4890 | MS.gene058912:CDS | 40.0% |
!! | TTGGACGATTAGGAGTATTG+TGG | - | 57393:4835-4854 | MS.gene058912:CDS | 40.0% |
!!! | ATTTTCGGCATCATTGGCTT+GGG | - | 57393:4872-4891 | MS.gene058912:CDS | 40.0% |
!!! | TTTTGGGATCCAGATTCCAT+GGG | - | 57393:6331-6350 | MS.gene058912:CDS | 40.0% |
AAAGCCTATGCTTGTGGTGT+TGG | - | 57393:5935-5954 | MS.gene058912:intron | 45.0% | |
AACATGGGGACTTGCACTAT+TGG | - | 57393:6067-6086 | MS.gene058912:CDS | 45.0% | |
AAGCTATTCATGGGATGCCA+AGG | - | 57393:4520-4539 | MS.gene058912:intron | 45.0% | |
AATCGCGCCAAGATTCAACA+AGG | - | 57393:5733-5752 | MS.gene058912:intron | 45.0% | |
ACACCTCAATGCTAACCTGA+AGG | + | 57393:5626-5645 | None:intergenic | 45.0% | |
AGCTGTGAACCATCTTCTCA+AGG | - | 57393:4697-4716 | MS.gene058912:intron | 45.0% | |
AGGCACAGTAAGAATGACAC+AGG | - | 57393:6912-6931 | MS.gene058912:intron | 45.0% | |
ATGGAGGGGATGATATGGAA+TGG | - | 57393:6581-6600 | MS.gene058912:intron | 45.0% | |
CAACACAAAGCCTATGCTTG+TGG | - | 57393:5929-5948 | MS.gene058912:intron | 45.0% | |
CACCAACCGTCTTGCTAAAT+CGG | - | 57393:4610-4629 | MS.gene058912:intron | 45.0% | |
CAGAAGCTAGACAGCATGAA+TGG | - | 57393:5057-5076 | MS.gene058912:CDS | 45.0% | |
CATCTGATGCCGAAAACATG+TGG | + | 57393:3786-3805 | None:intergenic | 45.0% | |
CCTGGTGAGATGTCTCAAAA+AGG | + | 57393:5363-5382 | None:intergenic | 45.0% | |
CTTGTATGGAGGGGATGATA+TGG | - | 57393:6576-6595 | MS.gene058912:intron | 45.0% | |
GACTGCAATCAATGATGCCA+TGG | - | 57393:5838-5857 | MS.gene058912:CDS | 45.0% | |
GATCCGTTGCCATTGTTTGA+TGG | - | 57393:5424-5443 | MS.gene058912:intron | 45.0% | |
GCATGCTAATGCATGGAGAT+GGG | + | 57393:4147-4166 | None:intergenic | 45.0% | |
GCCATCTGTCGTCAACATTT+AGG | - | 57393:5099-5118 | MS.gene058912:CDS | 45.0% | |
GGAATTGTTCCATCAACTCC+TGG | + | 57393:7078-7097 | None:intergenic | 45.0% | |
GGCACAGTAAGAATGACACA+GGG | - | 57393:6913-6932 | MS.gene058912:intron | 45.0% | |
GGGATGATATGGAATGGATC+AGG | - | 57393:6587-6606 | MS.gene058912:intron | 45.0% | |
GGGTCATAAACTGAGTACCA+TGG | + | 57393:5858-5877 | None:intergenic | 45.0% | |
GTAAGAATGACACAGGGCAA+AGG | - | 57393:6919-6938 | MS.gene058912:intron | 45.0% | |
TATGTAGGGAAAAGCAACCC+AGG | - | 57393:6670-6689 | MS.gene058912:intron | 45.0% | |
TCAGGTACATTAAGGAGGTG+TGG | - | 57393:5901-5920 | MS.gene058912:intron | 45.0% | |
TCCAAGTATTCCTATGGCTG+TGG | + | 57393:4492-4511 | None:intergenic | 45.0% | |
TCCACTCATCCAACTCATCA+AGG | + | 57393:6963-6982 | None:intergenic | 45.0% | |
TCCTCCCTTAAGCTAGAGAA+AGG | + | 57393:6029-6048 | None:intergenic | 45.0% | |
TCGCCGACCCAACAATAATT+TGG | - | 57393:6749-6768 | MS.gene058912:intron | 45.0% | |
TCTCATCCCTGACATCATTC+AGG | - | 57393:3915-3934 | MS.gene058912:CDS | 45.0% | |
TGCATGCTAATGCATGGAGA+TGG | + | 57393:4148-4167 | None:intergenic | 45.0% | |
TGCTAATGCTATCACCACCT+TGG | + | 57393:4540-4559 | None:intergenic | 45.0% | |
! | AACCGATTTAGCAAGACGGT+TGG | + | 57393:4615-4634 | None:intergenic | 45.0% |
! | AAGGCTCCCTTTTCCACAAT+TGG | + | 57393:5789-5808 | None:intergenic | 45.0% |
! | AGCTATGCGCCACATGTTTT+CGG | - | 57393:3774-3793 | MS.gene058912:CDS | 45.0% |
! | GATGAGTTGGATGAGTGGAA+GGG | - | 57393:6964-6983 | MS.gene058912:intron | 45.0% |
! | GTCTAGCTTCTGAGTCAAAC+TGG | + | 57393:5049-5068 | None:intergenic | 45.0% |
! | TCAACGTTTCAGGTGCTTCA+TGG | + | 57393:4784-4803 | None:intergenic | 45.0% |
! | TCATTGTTTCAGGTAACGGC+AGG | - | 57393:6541-6560 | MS.gene058912:intron | 45.0% |
! | TCCTTTCTCTAGCTTAAGGG+AGG | - | 57393:6025-6044 | MS.gene058912:CDS | 45.0% |
! | TCTTGCAAGTGTATGATGGG+TGG | - | 57393:4452-4471 | MS.gene058912:intron | 45.0% |
! | TGATGAGTTGGATGAGTGGA+AGG | - | 57393:6963-6982 | MS.gene058912:intron | 45.0% |
!! | AGATGGCGAGCTGATTTTGA+AGG | + | 57393:5086-5105 | None:intergenic | 45.0% |
!! | AGGTTAGCATTGAGGTGTTG+AGG | - | 57393:5628-5647 | MS.gene058912:intron | 45.0% |
!! | AGTCTATCTTTAGGACGGTG+AGG | + | 57393:6263-6282 | None:intergenic | 45.0% |
!! | CTTGCAAGTGTATGATGGGT+GGG | - | 57393:4453-4472 | MS.gene058912:intron | 45.0% |
!! | GGTGCAAATGGGTGTCATTA+AGG | - | 57393:4039-4058 | MS.gene058912:CDS | 45.0% |
!! | TTGCAAGTGTATGATGGGTG+GGG | - | 57393:4454-4473 | MS.gene058912:intron | 45.0% |
!!! | CCTTTTTGAGACATCTCACC+AGG | - | 57393:5360-5379 | MS.gene058912:intron | 45.0% |
!!! | CTGTTTTGTTTCGGTCCACA+AGG | + | 57393:5808-5827 | None:intergenic | 45.0% |
!!! | CTTTTGGGATCCAGATTCCA+TGG | - | 57393:6330-6349 | MS.gene058912:CDS | 45.0% |
AAGCCAGAATTCCCCTAGGT+TGG | + | 57393:4573-4592 | None:intergenic | 50.0% | |
ACAGGGAAAGCAGGTGCAAA+TGG | - | 57393:4027-4046 | MS.gene058912:CDS | 50.0% | |
AGCATTTGCAGCCAACCTAG+GGG | - | 57393:4559-4578 | MS.gene058912:intron | 50.0% | |
CAGCATTTGCAGCCAACCTA+GGG | - | 57393:4558-4577 | MS.gene058912:intron | 50.0% | |
CAGGGAAAGCAGGTGCAAAT+GGG | - | 57393:4028-4047 | MS.gene058912:CDS | 50.0% | |
CCATCTTCTCAAGGCCATGT+TGG | - | 57393:4706-4725 | MS.gene058912:intron | 50.0% | |
CGATTTAGCAAGACGGTTGG+TGG | + | 57393:4612-4631 | None:intergenic | 50.0% | |
CTACAAGCCAGAATTCCCCT+AGG | + | 57393:4577-4596 | None:intergenic | 50.0% | |
CTATTCATGGGATGCCAAGG+TGG | - | 57393:4523-4542 | MS.gene058912:intron | 50.0% | |
GATGTGGATTTGGGGAAGCA+TGG | - | 57393:5998-6017 | MS.gene058912:intron | 50.0% | |
GATTGTCCGGTCTAAATCGG+TGG | + | 57393:6456-6475 | None:intergenic | 50.0% | |
GCCACAGCCATAGGAATACT+TGG | - | 57393:4488-4507 | MS.gene058912:intron | 50.0% | |
GCTAATGCATGGAGATGGGA+GGG | + | 57393:4143-4162 | None:intergenic | 50.0% | |
GCTTAAGGGAGGAAGCTCTT+TGG | - | 57393:6036-6055 | MS.gene058912:CDS | 50.0% | |
GGATCCAACACCACAAGCAT+AGG | + | 57393:5942-5961 | None:intergenic | 50.0% | |
GTGGAAGCAGTCAACGTTTC+AGG | + | 57393:4794-4813 | None:intergenic | 50.0% | |
TGCGTCACGCAATTACTGCA+TGG | - | 57393:6488-6507 | MS.gene058912:intron | 50.0% | |
TGCTAATGCATGGAGATGGG+AGG | + | 57393:4144-4163 | None:intergenic | 50.0% | |
TTGTGGAAAAGGGAGCCTTG+TGG | - | 57393:5790-5809 | MS.gene058912:intron | 50.0% | |
! | CCAACATGGCCTTGAGAAGA+TGG | + | 57393:4709-4728 | None:intergenic | 50.0% |
! | CTGCCTTCAGGTTAGCATTG+AGG | - | 57393:5620-5639 | MS.gene058912:intron | 50.0% |
! | CTTGTGGTGTTGGATCCACA+GGG | - | 57393:5945-5964 | MS.gene058912:intron | 50.0% |
! | GCCTTGATGAGTTGGATGAG+TGG | - | 57393:6959-6978 | MS.gene058912:intron | 50.0% |
! | GCTCTAGATTGGTTCTTCCG+TGG | + | 57393:3757-3776 | None:intergenic | 50.0% |
! | GGGTTAGGCTTGAAAGCATG+TGG | - | 57393:6779-6798 | MS.gene058912:CDS | 50.0% |
! | TTGTGGTGTTGGATCCACAG+GGG | - | 57393:5946-5965 | MS.gene058912:intron | 50.0% |
!! | GCATCATTGGCTTGGGTCAA+GGG | - | 57393:4879-4898 | MS.gene058912:CDS | 50.0% |
!! | TCTTGGCCACCGATTTAGAC+CGG | - | 57393:6447-6466 | MS.gene058912:intron | 50.0% |
!! | TGCAAGTGTATGATGGGTGG+GGG | - | 57393:4455-4474 | MS.gene058912:intron | 50.0% |
!! | TGTGGCGCATAGCTCTAGAT+TGG | + | 57393:3768-3787 | None:intergenic | 50.0% |
AGGTTCACAACCTTCCCCTG+TGG | + | 57393:5963-5982 | None:intergenic | 55.0% | |
CAATTGGAGCATGAGTGGCG+CGG | + | 57393:3831-3850 | None:intergenic | 55.0% | |
CAGCCAACCTAGGGGAATTC+TGG | - | 57393:4567-4586 | MS.gene058912:intron | 55.0% | |
CAGGGATGAGAGAAGCTGCA+TGG | + | 57393:3906-3925 | None:intergenic | 55.0% | |
GATGCTCATGCCACAGCCAT+AGG | - | 57393:4479-4498 | MS.gene058912:intron | 55.0% | |
GCAGCATTTGCAGCCAACCT+AGG | - | 57393:4557-4576 | MS.gene058912:intron | 55.0% | |
! | GCTTGTGGTGTTGGATCCAC+AGG | - | 57393:5944-5963 | MS.gene058912:intron | 55.0% |
!! | GGCATCATTGGCTTGGGTCA+AGG | - | 57393:4878-4897 | MS.gene058912:CDS | 55.0% |
!! | TGACCCTTCACTTCTGGAGC+CGG | - | 57393:5872-5891 | MS.gene058912:CDS | 55.0% |
!! | TTCTGGAGCCGGCAAGTATC+AGG | - | 57393:5883-5902 | MS.gene058912:intron | 55.0% |
!! | TTGCCGGCTCCAGAAGTGAA+GGG | + | 57393:5878-5897 | None:intergenic | 55.0% |
TGCTGAGTGTGGCCAGCCAA+TGG | - | 57393:7113-7132 | MS.gene058912:CDS | 60.0% | |
! | GGTGTTGGATCCACAGGGGA+AGG | - | 57393:5950-5969 | MS.gene058912:intron | 60.0% |
!! | CTTGCCGGCTCCAGAAGTGA+AGG | + | 57393:5879-5898 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
57393 | gene | 3742 | 7170 | 3742 | ID=MS.gene058912 |
57393 | mRNA | 3742 | 7170 | 3742 | ID=MS.gene058912.t1;Parent=MS.gene058912 |
57393 | exon | 6976 | 7170 | 6976 | ID=MS.gene058912.t1.exon1;Parent=MS.gene058912.t1 |
57393 | CDS | 6976 | 7170 | 6976 | ID=cds.MS.gene058912.t1;Parent=MS.gene058912.t1 |
57393 | exon | 6777 | 6881 | 6777 | ID=MS.gene058912.t1.exon2;Parent=MS.gene058912.t1 |
57393 | CDS | 6777 | 6881 | 6777 | ID=cds.MS.gene058912.t1;Parent=MS.gene058912.t1 |
57393 | exon | 6012 | 6463 | 6012 | ID=MS.gene058912.t1.exon3;Parent=MS.gene058912.t1 |
57393 | CDS | 6012 | 6463 | 6012 | ID=cds.MS.gene058912.t1;Parent=MS.gene058912.t1 |
57393 | exon | 5792 | 5901 | 5792 | ID=MS.gene058912.t1.exon4;Parent=MS.gene058912.t1 |
57393 | CDS | 5792 | 5901 | 5792 | ID=cds.MS.gene058912.t1;Parent=MS.gene058912.t1 |
57393 | exon | 5450 | 5592 | 5450 | ID=MS.gene058912.t1.exon5;Parent=MS.gene058912.t1 |
57393 | CDS | 5450 | 5592 | 5450 | ID=cds.MS.gene058912.t1;Parent=MS.gene058912.t1 |
57393 | exon | 4791 | 5282 | 4791 | ID=MS.gene058912.t1.exon6;Parent=MS.gene058912.t1 |
57393 | CDS | 4791 | 5282 | 4791 | ID=cds.MS.gene058912.t1;Parent=MS.gene058912.t1 |
57393 | exon | 3742 | 4359 | 3742 | ID=MS.gene058912.t1.exon7;Parent=MS.gene058912.t1 |
57393 | CDS | 3742 | 4359 | 3742 | ID=cds.MS.gene058912.t1;Parent=MS.gene058912.t1 |
Gene Sequence |
Protein sequence |