AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54865

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54865.t1 MTR_2g091135 93.673 648 23 2 1 630 1 648 0.0 1228
MS.gene54865.t1 MTR_2g091135 93.266 594 22 2 1 576 1 594 0.0 1105
MS.gene54865.t1 MTR_2g091130 92.512 601 38 2 1 594 1 601 0.0 1104
MS.gene54865.t1 MTR_4g079650 62.115 454 133 9 124 575 494 910 1.73e-172 516
MS.gene54865.t1 MTR_4g079650 62.115 454 133 9 124 575 494 910 2.87e-172 516
MS.gene54865.t1 MTR_4g079650 65.344 378 121 6 124 499 494 863 2.98e-157 474
MS.gene54865.t1 MTR_4g092900 43.373 332 137 8 243 542 113 425 5.18e-69 234
MS.gene54865.t1 MTR_4g092900 44.479 317 125 8 258 542 128 425 6.49e-69 233
MS.gene54865.t1 MTR_4g092880 40.938 320 126 9 247 542 121 401 1.04e-57 202
MS.gene54865.t1 MTR_3g075040 41.245 257 120 6 290 542 207 436 1.10e-48 180
MS.gene54865.t1 MTR_3g075040 41.245 257 120 6 290 542 207 436 4.46e-48 180
MS.gene54865.t1 MTR_4g092880 40.927 259 114 8 247 481 121 364 1.34e-43 161
MS.gene54865.t1 MTR_0018s0090 58.095 105 44 0 287 391 195 299 2.44e-36 144
MS.gene54865.t1 MTR_0018s0090 47.260 146 70 2 287 431 195 334 4.08e-36 145
MS.gene54865.t1 MTR_2g018270 55.238 105 47 0 293 397 83 187 7.26e-34 136
MS.gene54865.t1 MTR_8g070660 28.455 246 157 4 286 528 90 319 5.54e-27 113
MS.gene54865.t1 MTR_8g070660 44.444 108 57 1 286 390 90 197 2.37e-25 106
MS.gene54865.t1 MTR_6g033375 30.165 242 138 4 296 528 75 294 4.00e-25 107
MS.gene54865.t1 MTR_5g069490 31.466 232 126 4 302 530 111 312 1.78e-23 102
MS.gene54865.t1 MTR_2g437920 28.992 238 123 7 304 528 146 350 3.84e-17 84.3
MS.gene54865.t1 MTR_2g005820 38.298 94 57 1 296 388 202 295 4.17e-12 69.7
MS.gene54865.t1 MTR_0662s0020 33.628 113 66 4 293 399 138 247 2.25e-11 65.1
MS.gene54865.t1 MTR_0702s0020 33.333 114 67 4 292 399 8 118 5.19e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54865.t1 AT1G06230 60.430 465 163 8 138 589 273 729 1.47e-163 487
MS.gene54865.t1 AT1G06230 60.430 465 163 8 138 589 273 729 1.47e-163 487
MS.gene54865.t1 AT1G06230 60.430 465 163 8 138 589 273 729 1.47e-163 487
MS.gene54865.t1 AT1G06230 60.430 465 163 8 138 589 273 729 1.47e-163 487
MS.gene54865.t1 AT1G73150 50.316 316 129 6 256 552 86 392 8.60e-86 275
MS.gene54865.t1 AT1G73150 50.316 316 129 6 256 552 86 392 2.17e-85 275
MS.gene54865.t1 AT1G17790 45.079 315 136 7 280 567 122 426 4.29e-72 241
MS.gene54865.t1 AT5G14270 36.882 263 130 6 286 543 134 365 4.06e-43 165
MS.gene54865.t1 AT5G14270 36.882 263 130 6 286 543 134 365 4.06e-43 165
MS.gene54865.t1 AT5G14270 36.882 263 130 6 286 543 134 365 4.95e-43 165
MS.gene54865.t1 AT3G27260 41.532 248 113 9 289 530 176 397 1.12e-42 164
MS.gene54865.t1 AT3G27260 41.532 248 113 9 289 530 176 397 1.84e-42 164
MS.gene54865.t1 AT3G27260 41.532 248 113 9 289 530 176 397 1.97e-42 164
MS.gene54865.t1 AT3G27260 41.532 248 113 9 289 530 127 348 2.28e-42 164
MS.gene54865.t1 AT3G01770 39.749 239 108 5 290 524 130 336 3.32e-40 154
MS.gene54865.t1 AT3G01770 38.983 236 114 5 290 524 130 336 8.36e-40 155
MS.gene54865.t1 AT5G63320 36.576 257 132 6 286 537 158 388 3.00e-37 145
MS.gene54865.t1 AT5G63320 36.576 257 132 6 286 537 158 388 3.00e-37 145
MS.gene54865.t1 AT5G63320 36.576 257 132 6 286 537 158 388 7.40e-37 148
MS.gene54865.t1 AT5G65630 63.000 100 37 0 285 384 165 264 2.39e-34 138
MS.gene54865.t1 AT5G65630 52.830 106 49 1 437 542 374 478 3.57e-27 117
MS.gene54865.t1 AT5G10550 59.000 100 41 0 285 384 170 269 5.25e-32 131
MS.gene54865.t1 AT5G10550 54.545 99 42 1 444 542 378 473 1.20e-25 112
MS.gene54865.t1 AT2G34900 29.317 249 158 3 290 537 1 232 1.83e-30 121
MS.gene54865.t1 AT2G34900 29.317 249 158 3 290 537 111 342 2.81e-30 123
MS.gene54865.t1 AT5G46550 47.107 121 57 2 293 407 73 192 1.98e-28 119
MS.gene54865.t1 AT3G52280 26.984 252 145 4 290 528 112 337 1.47e-25 109
MS.gene54865.t1 AT3G52280 26.984 252 145 4 290 528 95 320 1.63e-25 108
MS.gene54865.t1 AT1G58025 35.106 94 60 1 296 388 222 315 7.03e-11 65.5
MS.gene54865.t1 AT1G58025 35.106 94 60 1 296 388 222 315 7.03e-11 65.5
MS.gene54865.t1 AT1G58025 35.106 94 60 1 296 388 222 315 7.03e-11 65.5
MS.gene54865.t1 AT1G58025 35.106 94 60 1 296 388 222 315 7.40e-11 65.5
MS.gene54865.t1 AT1G58025 35.106 94 60 1 296 388 222 315 7.40e-11 65.5
MS.gene54865.t1 AT1G58025 35.106 94 60 1 296 388 222 315 8.47e-11 65.5

Find 171 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAGAAAGACTCATGCTTTC+CGG 0.233514 2.1:-9816809 MS.gene54865:CDS
ACATGAACATCTTGCCCTTT+AGG 0.234304 2.1:+9816954 None:intergenic
CGAGTCAAGCTCGTGGGATT+TGG 0.267300 2.1:+9816732 None:intergenic
CGGTGAGGTCTTTGGTGATT+AGG 0.271715 2.1:-9817580 MS.gene54865:CDS
CTAACACCATTACACTTAAC+TGG 0.281372 2.1:+9817405 None:intergenic
GGAGAAATAGGACATGGATT+TGG 0.291511 2.1:-9817224 MS.gene54865:CDS
AAGCATGGCGTTGGAGAAAT+AGG 0.295219 2.1:-9817236 MS.gene54865:CDS
ATGAGGTATGGCATGCATTA+TGG 0.295993 2.1:-9816861 MS.gene54865:CDS
CTCCGCCAGTTGTGAATTCT+AGG 0.296493 2.1:-9817805 MS.gene54865:CDS
GAGAAATAGGACATGGATTT+GGG 0.306787 2.1:-9817223 MS.gene54865:CDS
GTTGTTCCTCATACTCATTC+TGG 0.307616 2.1:-9817932 MS.gene54865:CDS
GATCGTTATAGGGTTGATAA+TGG 0.315135 2.1:-9817500 MS.gene54865:CDS
GTGTGGATGCAGAGACTCTT+TGG 0.328188 2.1:-9816509 MS.gene54865:CDS
CAACTATAACTGGTGGTTCT+TGG 0.330269 2.1:+9816285 None:intergenic
ACAATAGCATCTAGTTTATC+AGG 0.330645 2.1:+9816600 None:intergenic
CCTTGAAACGGTGAGGTCTT+TGG 0.332395 2.1:-9817588 MS.gene54865:CDS
AGCAGCTCAAGCAGTGATTC+TGG 0.334206 2.1:-9816069 MS.gene54865:CDS
TCAACAGTTGGATAGTGTTT+TGG 0.336808 2.1:-9817849 MS.gene54865:CDS
TCAGCGTCCGGGTCTGATGC+AGG 0.340500 2.1:-9815909 MS.gene54865:CDS
CGCAAGCAAGAATTCCGAAT+TGG 0.349984 2.1:+9817313 None:intergenic
ATGTGTCTGTGGATCGTTAT+AGG 0.361266 2.1:-9817511 MS.gene54865:CDS
GTGTTCCGAGAGAGGCTAAT+AGG 0.362707 2.1:-9817436 MS.gene54865:CDS
CTCGGGGCCTCAACTATAAC+TGG 0.375349 2.1:+9816275 None:intergenic
TGAGGTATGGCATGCATTAT+GGG 0.375871 2.1:-9816860 MS.gene54865:CDS
TTCAATTTCGTCATCATGTT+GGG 0.377251 2.1:+9816545 None:intergenic
GGGGAAATTCGAGTAGATAA+TGG 0.378135 2.1:-9816111 MS.gene54865:CDS
CATCAAACATCCGATGGACT+TGG 0.391323 2.1:-9817075 MS.gene54865:CDS
GGTTCCGGAGGATGGGAATT+CGG 0.396211 2.1:-9817828 MS.gene54865:CDS
AGTGATAGCTCCTCAGCGTC+CGG 0.408203 2.1:-9815921 MS.gene54865:CDS
TACCTGCTTGTCTTTCTCTC+GGG 0.411814 2.1:+9816258 None:intergenic
TTATCAGGATCGTTTGCCTT+CGG 0.416620 2.1:+9816681 None:intergenic
AGAGGATAAAGTTAATTCCT+TGG 0.418016 2.1:-9817957 MS.gene54865:CDS
ACATCCTCCGCAAACTCCTT+TGG 0.418265 2.1:+9817011 None:intergenic
ACCGCCACCGTCACTGTTGA+TGG 0.421112 2.1:-9817902 MS.gene54865:CDS
CAATGGATGGCTGGGAGGTA+TGG 0.422880 2.1:-9817545 MS.gene54865:CDS
ATACCTGCTTGTCTTTCTCT+CGG 0.424151 2.1:+9816257 None:intergenic
GACTTCTTGTTACTCTCAGC+AGG 0.426666 2.1:+9817275 None:intergenic
GAATAGAACTGGTTCGCCTT+AGG 0.428319 2.1:+9817335 None:intergenic
ATTCCGAATTGGAATAGAAC+TGG 0.439085 2.1:+9817324 None:intergenic
CAGCATTATTCGAGGAAAGA+TGG 0.443395 2.1:-9816914 MS.gene54865:CDS
GGGAAATTCGAGTAGATAAT+GGG 0.444542 2.1:-9816110 MS.gene54865:CDS
GAAGAGAAACAATGGATGGC+TGG 0.449622 2.1:-9817554 MS.gene54865:CDS
CCATGACATATAATCCTAAA+GGG 0.451805 2.1:-9816968 MS.gene54865:CDS
GGATAACGGGAATAATGTTT+CGG 0.452791 2.1:-9817873 MS.gene54865:CDS
GATCATTAAGAAACAAAATT+CGG 0.453860 2.1:-9816574 MS.gene54865:CDS
ATCGTTATAGGGTTGATAAT+GGG 0.456646 2.1:-9817499 MS.gene54865:CDS
CTTCAATTTCGTCATCATGT+TGG 0.459358 2.1:+9816544 None:intergenic
GCCATGACATATAATCCTAA+AGG 0.461758 2.1:-9816969 MS.gene54865:CDS
AAGAGATGCGGGAGATTAAG+AGG 0.463397 2.1:-9817625 MS.gene54865:CDS
TCCCCTTGCACAGGCAAGGA+TGG 0.467964 2.1:+9816129 None:intergenic
TAGTCTTGATGTTGTTCAGC+TGG 0.468758 2.1:-9817726 MS.gene54865:CDS
CACTCGGAGGTAGCTTCTGC+AGG 0.470610 2.1:-9817458 MS.gene54865:CDS
TACACGCCAGTTAAGTGTAA+TGG 0.471994 2.1:-9817411 MS.gene54865:CDS
TTGATGGGACGAAGGATAAC+GGG 0.473241 2.1:-9817886 MS.gene54865:CDS
CCCCTTGCACAGGCAAGGAT+GGG 0.474347 2.1:+9816130 None:intergenic
TTATCGTGACATCTTAAAGC+TGG 0.477773 2.1:+9817680 None:intergenic
CCCTTTAGGATTATATGTCA+TGG 0.480279 2.1:+9816968 None:intergenic
GTCAAGCTCGTGGGATTTGG+AGG 0.483150 2.1:+9816735 None:intergenic
GAGATTAAGAGGAAGCTTGA+AGG 0.483818 2.1:-9817614 MS.gene54865:CDS
GAACCAGTTCTATTCCAATT+CGG 0.484886 2.1:-9817327 MS.gene54865:CDS
TAATGTTTCGGTTCAACAGT+TGG 0.486868 2.1:-9817861 MS.gene54865:CDS
TTAAGATGTCACGATAAGAA+AGG 0.487138 2.1:-9817674 MS.gene54865:CDS
TGTGGATGCAGAGACTCTTT+GGG 0.487754 2.1:-9816508 MS.gene54865:CDS
CCAGTGGATGTTGAACGTCT+TGG 0.491052 2.1:-9817119 MS.gene54865:CDS
TCTAGCTTGAATAGCAAGTT+CGG 0.494718 2.1:+9816428 None:intergenic
GTCGAGTTTGTATCGTAAGC+AGG 0.496356 2.1:-9817759 MS.gene54865:CDS
AGTCGAGGCTGAGCAAGAAT+TGG 0.497693 2.1:-9817043 MS.gene54865:CDS
TGTGTCTGTGGATCGTTATA+GGG 0.499515 2.1:-9817510 MS.gene54865:CDS
ATTGTAATGTGACTCTATAA+TGG 0.505035 2.1:+9816890 None:intergenic
CCCTTGCACAGGCAAGGATG+GGG 0.511507 2.1:+9816131 None:intergenic
TGGAGCTAAGCGCGCTCACT+CGG 0.512470 2.1:-9817474 MS.gene54865:CDS
TCCAACCTAGAATTCACAAC+TGG 0.516769 2.1:+9817800 None:intergenic
CATGGAAAGAAGCATGGCGT+TGG 0.520162 2.1:-9817245 MS.gene54865:CDS
TAAGATGTCACGATAAGAAA+GGG 0.520501 2.1:-9817673 MS.gene54865:CDS
ATCAACAGTGACGGTGGCGG+TGG 0.521030 2.1:+9817904 None:intergenic
CCAAAGACCTCACCGTTTCA+AGG 0.522247 2.1:+9817588 None:intergenic
GTTGATGGGACGAAGGATAA+CGG 0.523599 2.1:-9817887 MS.gene54865:CDS
GCCAGTTGTGAATTCTAGGT+TGG 0.525168 2.1:-9817801 MS.gene54865:CDS
AGCATTATTCGAGGAAAGAT+GGG 0.527838 2.1:-9816913 MS.gene54865:CDS
AGTGTAATGGTGTTAGAGAA+TGG 0.529484 2.1:-9817398 MS.gene54865:CDS
TGATGAAACACAAGCACGGT+TGG 0.531315 2.1:-9817154 MS.gene54865:CDS
CCCATCCTTGCCTGTGCAAG+GGG 0.531370 2.1:-9816130 MS.gene54865:CDS
AAGAGAAACAATGGATGGCT+GGG 0.533071 2.1:-9817553 MS.gene54865:CDS
ACGGTCAAAGCAAGAGATGC+GGG 0.533396 2.1:-9817636 MS.gene54865:CDS
GCCCCGAGAGAAAGACAAGC+AGG 0.535875 2.1:-9816260 MS.gene54865:intron
CCCCATCCTTGCCTGTGCAA+GGG 0.536347 2.1:-9816131 MS.gene54865:CDS
GATAAGAAAGGGTTGGAGAA+TGG 0.539091 2.1:-9817662 MS.gene54865:CDS
CAAATCACCAAAGGAGTTTG+CGG 0.541456 2.1:-9817018 MS.gene54865:CDS
TACAATCATGAGATGAGGTA+TGG 0.542192 2.1:-9816873 MS.gene54865:CDS
GATGAAACACAAGCACGGTT+GGG 0.544423 2.1:-9817153 MS.gene54865:CDS
AGGGCAAGATGTTCATGTAA+TGG 0.545167 2.1:-9816949 MS.gene54865:CDS
TCATGTCAAGAGGTGGTGGC+CGG 0.545589 2.1:+9816790 None:intergenic
CAGCGTCCGGGTCTGATGCA+GGG 0.546012 2.1:-9815908 MS.gene54865:CDS
CCAAGACGTTCAACATCCAC+TGG 0.547510 2.1:+9817119 None:intergenic
GGGGACTGTAGTTGAAGATA+AGG 0.547595 2.1:-9818044 MS.gene54865:CDS
AATTTCCCCTTGCACAGGCA+AGG 0.547685 2.1:+9816125 None:intergenic
ACTCGAATTTCCCCTTGCAC+AGG 0.550360 2.1:+9816120 None:intergenic
GTGATAGCTCCTCAGCGTCC+GGG 0.553914 2.1:-9815920 MS.gene54865:CDS
GATGTTGTTCAGCTGGAAGA+TGG 0.557828 2.1:-9817719 MS.gene54865:CDS
GGTTAGTGAAAGTGTTGAGA+AGG 0.559698 2.1:-9817369 MS.gene54865:CDS
ACCTGCTTGTCTTTCTCTCG+GGG 0.559840 2.1:+9816259 None:intergenic
GCTTGAAGGCGACCTTGAAA+CGG 0.560792 2.1:-9817600 MS.gene54865:CDS
TATAGGGTTGATAATGGGAG+TGG 0.560910 2.1:-9817494 MS.gene54865:CDS
CACCACCTCTTGACATGAGA+AGG 0.560962 2.1:-9816785 MS.gene54865:CDS
TATTATCATCAAACATCCGA+TGG 0.562555 2.1:-9817081 MS.gene54865:CDS
AGGTGAAGGTGCAGAAATCG+CGG 0.564222 2.1:+9816836 None:intergenic
AAAGTTTGAGCAAATACAAG+AGG 0.565822 2.1:-9816455 MS.gene54865:CDS
GTAGCACCAGAATGAGTATG+AGG 0.566136 2.1:+9817926 None:intergenic
GTAAACCTATTAGCCTCTCT+CGG 0.567513 2.1:+9817431 None:intergenic
CCGCCACCGTCACTGTTGAT+GGG 0.567667 2.1:-9817901 MS.gene54865:CDS
CTTCTCATGTCAAGAGGTGG+TGG 0.571582 2.1:+9816786 None:intergenic
GGAGCCGAATTCCCATCCTC+CGG 0.571712 2.1:+9817824 None:intergenic
TGGATGGCTGGGAGGTATGG+TGG 0.572477 2.1:-9817542 MS.gene54865:CDS
TTAGGATTGAAGAGAAACAA+TGG 0.572518 2.1:-9817562 MS.gene54865:CDS
ATCAAACATCCGATGGACTT+GGG 0.572572 2.1:-9817074 MS.gene54865:CDS
AAGGGTTGGAGAATGGTTCA+CGG 0.577229 2.1:-9817655 MS.gene54865:CDS
ACATGATGACGAAATTGAAG+TGG 0.579909 2.1:-9816541 MS.gene54865:CDS
TTCTGCAGGTGTTCCGAGAG+AGG 0.582364 2.1:-9817444 MS.gene54865:CDS
TTGTGACCCTGCATCAGACC+CGG 0.582433 2.1:+9815902 None:intergenic
CCCATCAACAGTGACGGTGG+CGG 0.584798 2.1:+9817901 None:intergenic
TGTGAATTCTAGGTTGGACG+TGG 0.587021 2.1:-9817795 MS.gene54865:CDS
GTCTTTCTAGACAGAGGTGA+AGG 0.587573 2.1:+9816822 None:intergenic
TGAAGTGGACATTGATAGTG+TGG 0.589368 2.1:-9816526 MS.gene54865:CDS
ATGGCTGGGAGGTATGGTGG+TGG 0.591418 2.1:-9817539 MS.gene54865:CDS
TGGTGTTAGAGAATGGTCAC+GGG 0.593335 2.1:-9817391 MS.gene54865:CDS
AGATGTTCATGTAATGGCGG+AGG 0.593716 2.1:-9816943 MS.gene54865:CDS
ATGGTGTTAGAGAATGGTCA+CGG 0.594200 2.1:-9817392 MS.gene54865:CDS
ATGTCACGATAAGAAAGGGT+TGG 0.594829 2.1:-9817669 MS.gene54865:CDS
TGAGCGAATTGCCCAGCAGA+AGG 0.599288 2.1:-9816397 MS.gene54865:intron
GGTGAAGGTGCAGAAATCGC+GGG 0.600461 2.1:+9816837 None:intergenic
GAAGGAGAAGAGAACACCTA+AGG 0.603536 2.1:-9817351 MS.gene54865:CDS
TGCATCAGACCCGGACGCTG+AGG 0.609237 2.1:+9815911 None:intergenic
GATTCTGGCTCTTCATCAAG+TGG 0.609326 2.1:-9816054 MS.gene54865:intron
CACGGTCAAAGCAAGAGATG+CGG 0.609503 2.1:-9817637 MS.gene54865:CDS
AACCTAGAATTCACAACTGG+CGG 0.610102 2.1:+9817803 None:intergenic
GAGATACAAAGATACTCGGA+GGG 0.610462 2.1:-9818013 MS.gene54865:CDS
GGAGCTATCAGCATTATTCG+AGG 0.611908 2.1:-9816922 MS.gene54865:CDS
CACATTACAATCATGAGATG+AGG 0.614532 2.1:-9816878 MS.gene54865:CDS
TTCACAGTACCCAAGTCCAT+CGG 0.615883 2.1:+9817065 None:intergenic
AGTATGAGGAACAACTTCCA+AGG 0.625080 2.1:+9817940 None:intergenic
ATCCTTCTCATGTCAAGAGG+TGG 0.625638 2.1:+9816783 None:intergenic
AGCTGAACGAGTCAAGCTCG+TGG 0.627019 2.1:+9816725 None:intergenic
TTTGAGCAAATACAAGAGGA+AGG 0.629083 2.1:-9816451 MS.gene54865:CDS
GGCGTTGGAGAAATAGGACA+TGG 0.629090 2.1:-9817230 MS.gene54865:CDS
GCTGAACGAGTCAAGCTCGT+GGG 0.630998 2.1:+9816726 None:intergenic
TCAATCCTTCTCATGTCAAG+AGG 0.631076 2.1:+9816780 None:intergenic
TTGGGTGTTTAATACTCCAG+TGG 0.632618 2.1:-9817135 MS.gene54865:CDS
AAATCACATGGAAAGAAGCA+TGG 0.633912 2.1:-9817251 MS.gene54865:CDS
GATTGAAGAGAAACAATGGA+TGG 0.636737 2.1:-9817558 MS.gene54865:CDS
TGGTGGTTTGAATGTGTCTG+TGG 0.636743 2.1:-9817522 MS.gene54865:CDS
CCTTGCACAGGCAAGGATGG+GGG 0.638520 2.1:+9816132 None:intergenic
AACAAGAAGTCAAAATCACA+TGG 0.638541 2.1:-9817263 MS.gene54865:CDS
TAAAGAGATACAAAGATACT+CGG 0.640359 2.1:-9818017 MS.gene54865:CDS
AGCTAAGCGCGCTCACTCGG+AGG 0.646095 2.1:-9817471 MS.gene54865:CDS
CGTCCCATCAACAGTGACGG+TGG 0.653161 2.1:+9817898 None:intergenic
CTTCGTCCCATCAACAGTGA+CGG 0.654668 2.1:+9817895 None:intergenic
TTCTTGTTACTCTCAGCAGG+CGG 0.655387 2.1:+9817278 None:intergenic
GCATGAGTCTTTCTAGACAG+AGG 0.658883 2.1:+9816816 None:intergenic
GGGGCCTCAACTATAACTGG+TGG 0.663312 2.1:+9816278 None:intergenic
GCAAGATGTTCATGTAATGG+CGG 0.668019 2.1:-9816946 MS.gene54865:CDS
AGAGATACAAAGATACTCGG+AGG 0.670086 2.1:-9818014 MS.gene54865:CDS
AGAACCACCAGTTATAGTTG+AGG 0.671032 2.1:-9816282 MS.gene54865:CDS
CGTCACTGTTGATGGGACGA+AGG 0.671055 2.1:-9817894 MS.gene54865:CDS
ATCACCAAAGGAGTTTGCGG+AGG 0.671626 2.1:-9817015 MS.gene54865:CDS
ATAGCATCTAGTTTATCAGG+TGG 0.681272 2.1:+9816603 None:intergenic
AGAAACAATGGATGGCTGGG+AGG 0.683195 2.1:-9817550 MS.gene54865:CDS
AAGGCGACCTTGAAACGGTG+AGG 0.688100 2.1:-9817595 MS.gene54865:CDS
GAATTGGTACAAATCACCAA+AGG 0.690101 2.1:-9817027 MS.gene54865:CDS
AAGTTGATGAAACACAAGCA+CGG 0.699310 2.1:-9817158 MS.gene54865:CDS
ACTTGGGTACTGTGAAGTCG+AGG 0.713645 2.1:-9817058 MS.gene54865:CDS
GGTGTTAGAGAATGGTCACG+GGG 0.773902 2.1:-9817390 MS.gene54865:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTTCAAAGTTTCAG+AGG - chr2.1:9815976-9815995 MS.gene54865:intron 20.0%
!! CTTGTATAACCATAAATTAT+GGG + chr2.1:9817954-9817973 None:intergenic 20.0%
!! GATCATTAAGAAACAAAATT+CGG - chr2.1:9817377-9817396 MS.gene54865:CDS 20.0%
! ATTGTAATGTGACTCTATAA+TGG + chr2.1:9817064-9817083 None:intergenic 25.0%
! CCATAATTTATGGTTATACA+AGG - chr2.1:9817952-9817971 MS.gene54865:CDS 25.0%
! CCTTGTATAACCATAAATTA+TGG + chr2.1:9817955-9817974 None:intergenic 25.0%
! TAAAGAGATACAAAGATACT+CGG - chr2.1:9815934-9815953 MS.gene54865:intron 25.0%
AAAGTTTGAGCAAATACAAG+AGG - chr2.1:9817496-9817515 MS.gene54865:CDS 30.0%
AACAAGAAGTCAAAATCACA+TGG - chr2.1:9816688-9816707 MS.gene54865:CDS 30.0%
AGAGGATAAAGTTAATTCCT+TGG - chr2.1:9815994-9816013 MS.gene54865:intron 30.0%
CAGACATTAAAGTATAAGTG+AGG + chr2.1:9817982-9818001 None:intergenic 30.0%
CCATGACATATAATCCTAAA+GGG - chr2.1:9816983-9817002 MS.gene54865:CDS 30.0%
GATATCTGTCCCATAATTTA+TGG - chr2.1:9817942-9817961 MS.gene54865:CDS 30.0%
TAAGATGTCACGATAAGAAA+GGG - chr2.1:9816278-9816297 MS.gene54865:CDS 30.0%
TATTATCATCAAACATCCGA+TGG - chr2.1:9816870-9816889 MS.gene54865:CDS 30.0%
TTAAGATGTCACGATAAGAA+AGG - chr2.1:9816277-9816296 MS.gene54865:CDS 30.0%
TTAGGATTGAAGAGAAACAA+TGG - chr2.1:9816389-9816408 MS.gene54865:intron 30.0%
TTCAATTTCGTCATCATGTT+GGG + chr2.1:9817409-9817428 None:intergenic 30.0%
! ACAATAGCATCTAGTTTATC+AGG + chr2.1:9817354-9817373 None:intergenic 30.0%
! GCTCAAACTTTTCTTATAGT+TGG + chr2.1:9817487-9817506 None:intergenic 30.0%
! TATGTCATGTCTCTTTTATC+AGG + chr2.1:9817288-9817307 None:intergenic 30.0%
!! ATCGTTATAGGGTTGATAAT+GGG - chr2.1:9816452-9816471 MS.gene54865:CDS 30.0%
AAATCACATGGAAAGAAGCA+TGG - chr2.1:9816700-9816719 MS.gene54865:CDS 35.0%
AGCATTATTCGAGGAAAGAT+GGG - chr2.1:9817038-9817057 MS.gene54865:CDS 35.0%
ATTCCGAATTGGAATAGAAC+TGG + chr2.1:9816630-9816649 None:intergenic 35.0%
CAACAATAATAGTCCACAAG+CGG + chr2.1:9817722-9817741 None:intergenic 35.0%
CACATTACAATCATGAGATG+AGG - chr2.1:9817073-9817092 MS.gene54865:CDS 35.0%
CTAACACCATTACACTTAAC+TGG + chr2.1:9816549-9816568 None:intergenic 35.0%
CTTCAATTTCGTCATCATGT+TGG + chr2.1:9817410-9817429 None:intergenic 35.0%
GAACCAGTTCTATTCCAATT+CGG - chr2.1:9816624-9816643 MS.gene54865:CDS 35.0%
GAATTGGTACAAATCACCAA+AGG - chr2.1:9816924-9816943 MS.gene54865:CDS 35.0%
GAGAAATAGGACATGGATTT+GGG - chr2.1:9816728-9816747 MS.gene54865:CDS 35.0%
GATTGAAGAGAAACAATGGA+TGG - chr2.1:9816393-9816412 MS.gene54865:intron 35.0%
GCCATGACATATAATCCTAA+AGG - chr2.1:9816982-9817001 MS.gene54865:CDS 35.0%
GGGAAATTCGAGTAGATAAT+GGG - chr2.1:9817841-9817860 MS.gene54865:CDS 35.0%
GTATTTGCAAAAGAAGACAG+TGG + chr2.1:9817608-9817627 None:intergenic 35.0%
TAATGTTTCGGTTCAACAGT+TGG - chr2.1:9816090-9816109 MS.gene54865:CDS 35.0%
TACAATCATGAGATGAGGTA+TGG - chr2.1:9817078-9817097 MS.gene54865:CDS 35.0%
TTATCGTGACATCTTAAAGC+TGG + chr2.1:9816274-9816293 None:intergenic 35.0%
TTTGAGCAAATACAAGAGGA+AGG - chr2.1:9817500-9817519 MS.gene54865:CDS 35.0%
! ACATGATGACGAAATTGAAG+TGG - chr2.1:9817410-9817429 MS.gene54865:CDS 35.0%
! AGTGTAATGGTGTTAGAGAA+TGG - chr2.1:9816553-9816572 MS.gene54865:CDS 35.0%
! ATAGCATCTAGTTTATCAGG+TGG + chr2.1:9817351-9817370 None:intergenic 35.0%
! TCAACAGTTGGATAGTGTTT+TGG - chr2.1:9816102-9816121 MS.gene54865:CDS 35.0%
! TCTAGCTTGAATAGCAAGTT+CGG + chr2.1:9817526-9817545 None:intergenic 35.0%
! TGTCAATTTTACCTTCTGCT+GGG + chr2.1:9817568-9817587 None:intergenic 35.0%
! TTGTCAATTTTACCTTCTGC+TGG + chr2.1:9817569-9817588 None:intergenic 35.0%
!! AAGTTGATGAAACACAAGCA+CGG - chr2.1:9816793-9816812 MS.gene54865:CDS 35.0%
!! CCCTTTAGGATTATATGTCA+TGG + chr2.1:9816986-9817005 None:intergenic 35.0%
!! GATCGTTATAGGGTTGATAA+TGG - chr2.1:9816451-9816470 MS.gene54865:CDS 35.0%
!! GGATAACGGGAATAATGTTT+CGG - chr2.1:9816078-9816097 MS.gene54865:CDS 35.0%
AACCTAGAATTCACAACTGG+CGG + chr2.1:9816151-9816170 None:intergenic 40.0%
AAGAGAAACAATGGATGGCT+GGG - chr2.1:9816398-9816417 MS.gene54865:CDS 40.0%
ACATGAACATCTTGCCCTTT+AGG + chr2.1:9817000-9817019 None:intergenic 40.0%
AGAACCACCAGTTATAGTTG+AGG - chr2.1:9817669-9817688 MS.gene54865:CDS 40.0%
AGAGATACAAAGATACTCGG+AGG - chr2.1:9815937-9815956 MS.gene54865:intron 40.0%
AGGGCAAGATGTTCATGTAA+TGG - chr2.1:9817002-9817021 MS.gene54865:CDS 40.0%
AGTATGAGGAACAACTTCCA+AGG + chr2.1:9816014-9816033 None:intergenic 40.0%
ATACCTGCTTGTCTTTCTCT+CGG + chr2.1:9817697-9817716 None:intergenic 40.0%
ATGAGGTATGGCATGCATTA+TGG - chr2.1:9817090-9817109 MS.gene54865:CDS 40.0%
ATGTCACGATAAGAAAGGGT+TGG - chr2.1:9816282-9816301 MS.gene54865:CDS 40.0%
ATGTGTCTGTGGATCGTTAT+AGG - chr2.1:9816440-9816459 MS.gene54865:CDS 40.0%
CAAATCACCAAAGGAGTTTG+CGG - chr2.1:9816933-9816952 MS.gene54865:CDS 40.0%
CAACTATAACTGGTGGTTCT+TGG + chr2.1:9817669-9817688 None:intergenic 40.0%
CAGCATTATTCGAGGAAAGA+TGG - chr2.1:9817037-9817056 MS.gene54865:CDS 40.0%
CTAGAAAGACTCATGCTTTC+CGG - chr2.1:9817142-9817161 MS.gene54865:CDS 40.0%
GAGATACAAAGATACTCGGA+GGG - chr2.1:9815938-9815957 MS.gene54865:intron 40.0%
GAGATTAAGAGGAAGCTTGA+AGG - chr2.1:9816337-9816356 MS.gene54865:intron 40.0%
GATAAGAAAGGGTTGGAGAA+TGG - chr2.1:9816289-9816308 MS.gene54865:CDS 40.0%
GCAAGATGTTCATGTAATGG+CGG - chr2.1:9817005-9817024 MS.gene54865:CDS 40.0%
GGAGAAATAGGACATGGATT+TGG - chr2.1:9816727-9816746 MS.gene54865:CDS 40.0%
GGGGAAATTCGAGTAGATAA+TGG - chr2.1:9817840-9817859 MS.gene54865:CDS 40.0%
GTTGTTCCTCATACTCATTC+TGG - chr2.1:9816019-9816038 MS.gene54865:intron 40.0%
TACACGCCAGTTAAGTGTAA+TGG - chr2.1:9816540-9816559 MS.gene54865:CDS 40.0%
TCAATCCTTCTCATGTCAAG+AGG + chr2.1:9817174-9817193 None:intergenic 40.0%
TCCAACCTAGAATTCACAAC+TGG + chr2.1:9816154-9816173 None:intergenic 40.0%
TGAGGTATGGCATGCATTAT+GGG - chr2.1:9817091-9817110 MS.gene54865:CDS 40.0%
TGTGTCTGTGGATCGTTATA+GGG - chr2.1:9816441-9816460 MS.gene54865:CDS 40.0%
TTATCAGGATCGTTTGCCTT+CGG + chr2.1:9817273-9817292 None:intergenic 40.0%
TTGGGTGTTTAATACTCCAG+TGG - chr2.1:9816816-9816835 MS.gene54865:CDS 40.0%
! ATCAAACATCCGATGGACTT+GGG - chr2.1:9816877-9816896 MS.gene54865:CDS 40.0%
! ATGGTGTTAGAGAATGGTCA+CGG - chr2.1:9816559-9816578 MS.gene54865:CDS 40.0%
! GTAAACCTATTAGCCTCTCT+CGG + chr2.1:9816523-9816542 None:intergenic 40.0%
! TAGTCTTGATGTTGTTCAGC+TGG - chr2.1:9816225-9816244 MS.gene54865:intron 40.0%
!! GGTTAGTGAAAGTGTTGAGA+AGG - chr2.1:9816582-9816601 MS.gene54865:CDS 40.0%
!! TATAGGGTTGATAATGGGAG+TGG - chr2.1:9816457-9816476 MS.gene54865:CDS 40.0%
!! TGAAGTGGACATTGATAGTG+TGG - chr2.1:9817425-9817444 MS.gene54865:CDS 40.0%
!!! GTTGGATAGTGTTTTGGTTC+CGG - chr2.1:9816108-9816127 MS.gene54865:CDS 40.0%
AAGAGATGCGGGAGATTAAG+AGG - chr2.1:9816326-9816345 MS.gene54865:intron 45.0%
AAGGGTTGGAGAATGGTTCA+CGG - chr2.1:9816296-9816315 MS.gene54865:intron 45.0%
AGATGTTCATGTAATGGCGG+AGG - chr2.1:9817008-9817027 MS.gene54865:CDS 45.0%
ATCCTTCTCATGTCAAGAGG+TGG + chr2.1:9817171-9817190 None:intergenic 45.0%
CGCAAGCAAGAATTCCGAAT+TGG + chr2.1:9816641-9816660 None:intergenic 45.0%
GAAGAGAAACAATGGATGGC+TGG - chr2.1:9816397-9816416 MS.gene54865:intron 45.0%
GAAGGAGAAGAGAACACCTA+AGG - chr2.1:9816600-9816619 MS.gene54865:CDS 45.0%
GACTTCTTGTTACTCTCAGC+AGG + chr2.1:9816679-9816698 None:intergenic 45.0%
GAGAGAAAGACAAGCAGGTA+TGG - chr2.1:9817696-9817715 MS.gene54865:CDS 45.0%
GATGAAACACAAGCACGGTT+GGG - chr2.1:9816798-9816817 MS.gene54865:CDS 45.0%
GATGTTGTTCAGCTGGAAGA+TGG - chr2.1:9816232-9816251 MS.gene54865:intron 45.0%
GCATGAGTCTTTCTAGACAG+AGG + chr2.1:9817138-9817157 None:intergenic 45.0%
GCCAGTTGTGAATTCTAGGT+TGG - chr2.1:9816150-9816169 MS.gene54865:intron 45.0%
GGAGCTATCAGCATTATTCG+AGG - chr2.1:9817029-9817048 MS.gene54865:CDS 45.0%
GGGGACTGTAGTTGAAGATA+AGG - chr2.1:9815907-9815926 MS.gene54865:CDS 45.0%
GTAGCACCAGAATGAGTATG+AGG + chr2.1:9816028-9816047 None:intergenic 45.0%
GTCGAGTTTGTATCGTAAGC+AGG - chr2.1:9816192-9816211 MS.gene54865:intron 45.0%
GTCTTTCTAGACAGAGGTGA+AGG + chr2.1:9817132-9817151 None:intergenic 45.0%
TACCTGCTTGTCTTTCTCTC+GGG + chr2.1:9817696-9817715 None:intergenic 45.0%
TGATGAAACACAAGCACGGT+TGG - chr2.1:9816797-9816816 MS.gene54865:CDS 45.0%
TGGTGGTTTGAATGTGTCTG+TGG - chr2.1:9816429-9816448 MS.gene54865:CDS 45.0%
TGTGGATGCAGAGACTCTTT+GGG - chr2.1:9817443-9817462 MS.gene54865:CDS 45.0%
TTCACAGTACCCAAGTCCAT+CGG + chr2.1:9816889-9816908 None:intergenic 45.0%
TTCTTGTTACTCTCAGCAGG+CGG + chr2.1:9816676-9816695 None:intergenic 45.0%
TTGATGGGACGAAGGATAAC+GGG - chr2.1:9816065-9816084 MS.gene54865:CDS 45.0%
! AAGCATGGCGTTGGAGAAAT+AGG - chr2.1:9816715-9816734 MS.gene54865:CDS 45.0%
! CATCAAACATCCGATGGACT+TGG - chr2.1:9816876-9816895 MS.gene54865:CDS 45.0%
! GTTGATGGGACGAAGGATAA+CGG - chr2.1:9816064-9816083 MS.gene54865:CDS 45.0%
! TGGTGTTAGAGAATGGTCAC+GGG - chr2.1:9816560-9816579 MS.gene54865:CDS 45.0%
! TGTGAATTCTAGGTTGGACG+TGG - chr2.1:9816156-9816175 MS.gene54865:intron 45.0%
!! GAATAGAACTGGTTCGCCTT+AGG + chr2.1:9816619-9816638 None:intergenic 45.0%
!! GATTCTGGCTCTTCATCAAG+TGG - chr2.1:9817897-9817916 MS.gene54865:CDS 45.0%
!!! TCGTTTGCCTTCGGCTTTTT+TGG + chr2.1:9817264-9817283 None:intergenic 45.0%
AATTTCCCCTTGCACAGGCA+AGG + chr2.1:9817829-9817848 None:intergenic 50.0%
ACATCCTCCGCAAACTCCTT+TGG + chr2.1:9816943-9816962 None:intergenic 50.0%
ACCTGCTTGTCTTTCTCTCG+GGG + chr2.1:9817695-9817714 None:intergenic 50.0%
ACGGTCAAAGCAAGAGATGC+GGG - chr2.1:9816315-9816334 MS.gene54865:intron 50.0%
ACTCGAATTTCCCCTTGCAC+AGG + chr2.1:9817834-9817853 None:intergenic 50.0%
AGAAACAATGGATGGCTGGG+AGG - chr2.1:9816401-9816420 MS.gene54865:CDS 50.0%
AGCAGCTCAAGCAGTGATTC+TGG - chr2.1:9817882-9817901 MS.gene54865:CDS 50.0%
AGTCGAGGCTGAGCAAGAAT+TGG - chr2.1:9816908-9816927 MS.gene54865:CDS 50.0%
ATCACCAAAGGAGTTTGCGG+AGG - chr2.1:9816936-9816955 MS.gene54865:CDS 50.0%
CACCACCTCTTGACATGAGA+AGG - chr2.1:9817166-9817185 MS.gene54865:CDS 50.0%
CACGGTCAAAGCAAGAGATG+CGG - chr2.1:9816314-9816333 MS.gene54865:intron 50.0%
CCAAAGACCTCACCGTTTCA+AGG + chr2.1:9816366-9816385 None:intergenic 50.0%
CCAAGACGTTCAACATCCAC+TGG + chr2.1:9816835-9816854 None:intergenic 50.0%
CCAGTGGATGTTGAACGTCT+TGG - chr2.1:9816832-9816851 MS.gene54865:CDS 50.0%
CCTTGAAACGGTGAGGTCTT+TGG - chr2.1:9816363-9816382 MS.gene54865:intron 50.0%
CTCCGCCAGTTGTGAATTCT+AGG - chr2.1:9816146-9816165 MS.gene54865:CDS 50.0%
CTTCGTCCCATCAACAGTGA+CGG + chr2.1:9816059-9816078 None:intergenic 50.0%
CTTCTCATGTCAAGAGGTGG+TGG + chr2.1:9817168-9817187 None:intergenic 50.0%
GCTTGAAGGCGACCTTGAAA+CGG - chr2.1:9816351-9816370 MS.gene54865:intron 50.0%
GGTGTTAGAGAATGGTCACG+GGG - chr2.1:9816561-9816580 MS.gene54865:CDS 50.0%
GTGTGGATGCAGAGACTCTT+TGG - chr2.1:9817442-9817461 MS.gene54865:CDS 50.0%
GTGTTCCGAGAGAGGCTAAT+AGG - chr2.1:9816515-9816534 MS.gene54865:CDS 50.0%
TCCTGCTCCAAAAAAGCCGA+AGG - chr2.1:9817254-9817273 MS.gene54865:CDS 50.0%
! ACTTGGGTACTGTGAAGTCG+AGG - chr2.1:9816893-9816912 MS.gene54865:CDS 50.0%
! AGGTGAAGGTGCAGAAATCG+CGG + chr2.1:9817118-9817137 None:intergenic 50.0%
! CATGGAAAGAAGCATGGCGT+TGG - chr2.1:9816706-9816725 MS.gene54865:CDS 50.0%
! CGGTGAGGTCTTTGGTGATT+AGG - chr2.1:9816371-9816390 MS.gene54865:intron 50.0%
! GGCGTTGGAGAAATAGGACA+TGG - chr2.1:9816721-9816740 MS.gene54865:CDS 50.0%
!! TCTTGGCTCTACAGGAAGCA+TGG + chr2.1:9817652-9817671 None:intergenic 50.0%
!!! AGTGTTTTGGTTCCGGAGGA+TGG - chr2.1:9816115-9816134 MS.gene54865:CDS 50.0%
!!! GGATAGTGTTTTGGTTCCGG+AGG - chr2.1:9816111-9816130 MS.gene54865:CDS 50.0%
!!! GTGTTTTGGTTCCGGAGGAT+GGG - chr2.1:9816116-9816135 MS.gene54865:CDS 50.0%
AAGGCGACCTTGAAACGGTG+AGG - chr2.1:9816356-9816375 MS.gene54865:intron 55.0%
AGCTGAACGAGTCAAGCTCG+TGG + chr2.1:9817229-9817248 None:intergenic 55.0%
AGTGATAGCTCCTCAGCGTC+CGG - chr2.1:9818030-9818049 MS.gene54865:CDS 55.0%
CAATGGATGGCTGGGAGGTA+TGG - chr2.1:9816406-9816425 MS.gene54865:CDS 55.0%
CGAGTCAAGCTCGTGGGATT+TGG + chr2.1:9817222-9817241 None:intergenic 55.0%
CTCGGGGCCTCAACTATAAC+TGG + chr2.1:9817679-9817698 None:intergenic 55.0%
GCTGAACGAGTCAAGCTCGT+GGG + chr2.1:9817228-9817247 None:intergenic 55.0%
GGGGCCTCAACTATAACTGG+TGG + chr2.1:9817676-9817695 None:intergenic 55.0%
GGTTCCGGAGGATGGGAATT+CGG - chr2.1:9816123-9816142 MS.gene54865:CDS 55.0%
GTCAAGCTCGTGGGATTTGG+AGG + chr2.1:9817219-9817238 None:intergenic 55.0%
TGAGCGAATTGCCCAGCAGA+AGG - chr2.1:9817554-9817573 MS.gene54865:CDS 55.0%
TTCTGCAGGTGTTCCGAGAG+AGG - chr2.1:9816507-9816526 MS.gene54865:CDS 55.0%
TTGTGACCCTGCATCAGACC+CGG + chr2.1:9818052-9818071 None:intergenic 55.0%
! CGTCACTGTTGATGGGACGA+AGG - chr2.1:9816057-9816076 MS.gene54865:CDS 55.0%
! GGTGAAGGTGCAGAAATCGC+GGG + chr2.1:9817117-9817136 None:intergenic 55.0%
! TCATGTCAAGAGGTGGTGGC+CGG + chr2.1:9817164-9817183 None:intergenic 55.0%
!! CTGGTGGTTCTTGGCTCTAC+AGG + chr2.1:9817660-9817679 None:intergenic 55.0%
!!! GCCTTCGGCTTTTTTGGAGC+AGG + chr2.1:9817258-9817277 None:intergenic 55.0%
ACCGCCACCGTCACTGTTGA+TGG - chr2.1:9816049-9816068 MS.gene54865:intron 60.0%
CAAGCAGGTATGGCCGCTTG+TGG - chr2.1:9817706-9817725 MS.gene54865:CDS 60.0%
CACTCGGAGGTAGCTTCTGC+AGG - chr2.1:9816493-9816512 MS.gene54865:CDS 60.0%
CCCATCAACAGTGACGGTGG+CGG + chr2.1:9816053-9816072 None:intergenic 60.0%
CCCATCCTTGCCTGTGCAAG+GGG - chr2.1:9817821-9817840 MS.gene54865:CDS 60.0%
CCCCATCCTTGCCTGTGCAA+GGG - chr2.1:9817820-9817839 MS.gene54865:CDS 60.0%
CCCCTTGCACAGGCAAGGAT+GGG + chr2.1:9817824-9817843 None:intergenic 60.0%
CCCTTGCACAGGCAAGGATG+GGG + chr2.1:9817823-9817842 None:intergenic 60.0%
CCGCCACCGTCACTGTTGAT+GGG - chr2.1:9816050-9816069 MS.gene54865:intron 60.0%
CCTTGCACAGGCAAGGATGG+GGG + chr2.1:9817822-9817841 None:intergenic 60.0%
CGTCCCATCAACAGTGACGG+TGG + chr2.1:9816056-9816075 None:intergenic 60.0%
GCCCCGAGAGAAAGACAAGC+AGG - chr2.1:9817691-9817710 MS.gene54865:CDS 60.0%
GGAGCCGAATTCCCATCCTC+CGG + chr2.1:9816130-9816149 None:intergenic 60.0%
GTGATAGCTCCTCAGCGTCC+GGG - chr2.1:9818031-9818050 MS.gene54865:CDS 60.0%
TCCCCTTGCACAGGCAAGGA+TGG + chr2.1:9817825-9817844 None:intergenic 60.0%
TGGAGCTAAGCGCGCTCACT+CGG - chr2.1:9816477-9816496 MS.gene54865:CDS 60.0%
! ATCAACAGTGACGGTGGCGG+TGG + chr2.1:9816050-9816069 None:intergenic 60.0%
! ATGGCTGGGAGGTATGGTGG+TGG - chr2.1:9816412-9816431 MS.gene54865:CDS 60.0%
! TGGATGGCTGGGAGGTATGG+TGG - chr2.1:9816409-9816428 MS.gene54865:CDS 60.0%
AGCTAAGCGCGCTCACTCGG+AGG - chr2.1:9816480-9816499 MS.gene54865:CDS 65.0%
CAGCGTCCGGGTCTGATGCA+GGG - chr2.1:9818043-9818062 MS.gene54865:CDS 65.0%
CCCCCATCCTTGCCTGTGCA+AGG - chr2.1:9817819-9817838 MS.gene54865:CDS 65.0%
TCAGCGTCCGGGTCTGATGC+AGG - chr2.1:9818042-9818061 MS.gene54865:CDS 65.0%
TGCATCAGACCCGGACGCTG+AGG + chr2.1:9818043-9818062 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 9815899 9818074 9815899 ID=MS.gene54865
chr2.1 mRNA 9815899 9818074 9815899 ID=MS.gene54865.t1;Parent=MS.gene54865
chr2.1 exon 9816398 9818074 9816398 ID=MS.gene54865.t1.exon1;Parent=MS.gene54865.t1
chr2.1 CDS 9816398 9818074 9816398 ID=cds.MS.gene54865.t1;Parent=MS.gene54865.t1
chr2.1 exon 9816261 9816309 9816261 ID=MS.gene54865.t1.exon2;Parent=MS.gene54865.t1
chr2.1 CDS 9816261 9816309 9816261 ID=cds.MS.gene54865.t1;Parent=MS.gene54865.t1
chr2.1 exon 9816055 9816168 9816055 ID=MS.gene54865.t1.exon3;Parent=MS.gene54865.t1
chr2.1 CDS 9816055 9816168 9816055 ID=cds.MS.gene54865.t1;Parent=MS.gene54865.t1
chr2.1 exon 9815899 9815951 9815899 ID=MS.gene54865.t1.exon4;Parent=MS.gene54865.t1
chr2.1 CDS 9815899 9815951 9815899 ID=cds.MS.gene54865.t1;Parent=MS.gene54865.t1
Gene Sequence

>MS.gene54865

ATGGATTCGGGGACTGTAGTTGAAGATAAGGTAGTTAAAGAGATACAAAGATACTCGGAGGGAAAAGTATACACGAGAAAAAATTTCAAAGTTTCAGAGGATAAAGTTAATTCCTTGGAAGTTGTTCCTCATACTCATTCTGGTGCTACCACCGCCACCGTCACTGTTGATGGGACGAAGGATAACGGGAATAATGTTTCGGTTCAACAGTTGGATAGTGTTTTGGTTCCGGAGGATGGGAATTCGGCTCCGCCAGTTGTGAATTCTAGGTTGGACGTGGTTTCTGAAGATTCGTCGAGTTTGTATCGTAAGCAGGATGAGCATTTTAGTCTTGATGTTGTTCAGCTGGAAGATGGTAATGATTCGTTAGAACCAGCTTTAAGATGTCACGATAAGAAAGGGTTGGAGAATGGTTCACGGTCAAAGCAAGAGATGCGGGAGATTAAGAGGAAGCTTGAAGGCGACCTTGAAACGGTGAGGTCTTTGGTGATTAGGATTGAAGAGAAACAATGGATGGCTGGGAGGTATGGTGGTGGTTTGAATGTGTCTGTGGATCGTTATAGGGTTGATAATGGGAGTGGAGCTAAGCGCGCTCACTCGGAGGTAGCTTCTGCAGGTGTTCCGAGAGAGGCTAATAGGTTTACACGCCAGTTAAGTGTAATGGTGTTAGAGAATGGTCACGGGGTTAGTGAAAGTGTTGAGAAGGAGAAGAGAACACCTAAGGCGAACCAGTTCTATTCCAATTCGGAATTCTTGCTTGCGAAAGATAAGTTTCCGCCTGCTGAGAGTAACAAGAAGTCAAAATCACATGGAAAGAAGCATGGCGTTGGAGAAATAGGACATGGATTTGGGATAGTATCTAAGTATTTGAAGAACTGTAGCTCATTGCTTGAAAAGTTGATGAAACACAAGCACGGTTGGGTGTTTAATACTCCAGTGGATGTTGAACGTCTTGGTTTGCATGATTATTTTATTATCATCAAACATCCGATGGACTTGGGTACTGTGAAGTCGAGGCTGAGCAAGAATTGGTACAAATCACCAAAGGAGTTTGCGGAGGATGTGAGACTTACTTTTCGTAATGCCATGACATATAATCCTAAAGGGCAAGATGTTCATGTAATGGCGGAGGAGCTATCAGCATTATTCGAGGAAAGATGGGCCATTATAGAGTCACATTACAATCATGAGATGAGGTATGGCATGCATTATGGGCCCGCGATTTCTGCACCTTCACCTCTGTCTAGAAAGACTCATGCTTTCCGGCCACCACCTCTTGACATGAGAAGGATTGATAGATCAGAATCAATAACAAAACCTCCAAATCCCACGAGCTTGACTCGTTCAGCTCGAACTCCTGCTCCAAAAAAGCCGAAGGCAAACGATCCTGATAAAAGAGACATGACATACGATGAAAAGCAAAAACTTAGCACACATCTTCAGAATCTACCACCTGATAAACTAGATGCTATTGTACAGATCATTAAGAAACAAAATTCGGCACTTTCCCAACATGATGACGAAATTGAAGTGGACATTGATAGTGTGGATGCAGAGACTCTTTGGGAGCTTGATAGATATGTTACCAACTATAAGAAAAGTTTGAGCAAATACAAGAGGAAGGCCGAACTTGCTATTCAAGCTAGAGCAGAAGCTGAGCGAATTGCCCAGCAGAAGGTAAAATTGACAATTTCAACGTTTAATATCCACTGTCTTCTTTTGCAAATACTTGTTACTAATTGAATTTATTCCATGCTTCCTGTAGAGCCAAGAACCACCAGTTATAGTTGAGGCCCCGAGAGAAAGACAAGCAGGTATGGCCGCTTGTGGACTATTATTGTTGATCTCTTTTCATCATTCATCAATTAAATTAATTGAAATATTTTGTCTGCTTGTTTCTGAGCAGATGAAAGAAATGATCCCCCATCCTTGCCTGTGCAAGGGGAAATTCGAGTAGATAATGGGAGTAAGACAAGTAGTTCAAGCAGCTCAAGCAGTGATTCTGGCTCTTCATCAAGTGGTATATTAAATAATTATTTAATAGATATCTGTCCCATAATTTATGGTTATACAAGGTCAACCTCACTTATACTTTAATGTCTGATATTAATGTGCTTTTGCAGATTCTGATAGTGATAGCTCCTCAGCGTCCGGGTCTGATGCAGGGTCACAATGA
Protein sequence

>MS.gene54865.t1

MDSGTVVEDKVVKEIQRYSEGKVYTRKNFKVSEDKVNSLEVVPHTHSGATTATVTVDGTKDNGNNVSVQQLDSVLVPEDGNSAPPVVNSRLDVVSEDSSSLYRKQDEHFSLDVVQLEDGNDSLEPALRCHDKKGLENGSRSKQEMREIKRKLEGDLETVRSLVIRIEEKQWMAGRYGGGLNVSVDRYRVDNGSGAKRAHSEVASAGVPREANRFTRQLSVMVLENGHGVSESVEKEKRTPKANQFYSNSEFLLAKDKFPPAESNKKSKSHGKKHGVGEIGHGFGIVSKYLKNCSSLLEKLMKHKHGWVFNTPVDVERLGLHDYFIIIKHPMDLGTVKSRLSKNWYKSPKEFAEDVRLTFRNAMTYNPKGQDVHVMAEELSALFEERWAIIESHYNHEMRYGMHYGPAISAPSPLSRKTHAFRPPPLDMRRIDRSESITKPPNPTSLTRSARTPAPKKPKANDPDKRDMTYDEKQKLSTHLQNLPPDKLDAIVQIIKKQNSALSQHDDEIEVDIDSVDAETLWELDRYVTNYKKSLSKYKRKAELAIQARAEAERIAQQKSQEPPVIVEAPRERQADERNDPPSLPVQGEIRVDNGSKTSSSSSSSSDSGSSSSDSDSDSSSASGSDAGSQ