Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54957.t1 | XP_003624478.1 | 98.6 | 369 | 5 | 0 | 2 | 370 | 5 | 373 | 1.50E-207 | 731.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54957.t1 | Q9FMU6 | 79.5 | 365 | 65 | 3 | 8 | 363 | 3 | 366 | 4.6e-165 | 582.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54957.t1 | Q2HUK6 | 98.6 | 369 | 5 | 0 | 2 | 370 | 5 | 373 | 1.1e-207 | 731.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene05212 | MS.gene54957 | 0.830855 | 2.32E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene54957 | MS.gene64914 | PPI |
MS.gene54957 | MS.gene86518 | PPI |
MS.gene72685 | MS.gene54957 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54957.t1 | MTR_7g083790 | 98.391 | 373 | 3 | 1 | 1 | 370 | 1 | 373 | 0.0 | 740 |
MS.gene54957.t1 | MTR_8g099910 | 77.654 | 358 | 75 | 2 | 6 | 363 | 5 | 357 | 0.0 | 563 |
MS.gene54957.t1 | MTR_6g033280 | 71.633 | 349 | 89 | 2 | 11 | 358 | 3 | 342 | 0.0 | 517 |
MS.gene54957.t1 | MTR_4g094578 | 43.253 | 289 | 162 | 1 | 74 | 360 | 24 | 312 | 1.64e-87 | 267 |
MS.gene54957.t1 | MTR_5g024770 | 46.643 | 283 | 129 | 1 | 71 | 353 | 13 | 273 | 1.80e-86 | 264 |
MS.gene54957.t1 | MTR_6g034515 | 29.008 | 262 | 150 | 9 | 89 | 331 | 77 | 321 | 4.13e-16 | 79.3 |
MS.gene54957.t1 | MTR_3g107510 | 26.339 | 224 | 156 | 5 | 44 | 264 | 86 | 303 | 1.15e-15 | 78.2 |
MS.gene54957.t1 | MTR_2g436930 | 24.686 | 239 | 155 | 4 | 79 | 295 | 15 | 250 | 1.99e-13 | 70.9 |
MS.gene54957.t1 | MTR_2g436930 | 26.263 | 198 | 119 | 7 | 75 | 249 | 125 | 318 | 5.63e-11 | 63.5 |
MS.gene54957.t1 | MTR_1g012030 | 27.322 | 183 | 129 | 3 | 82 | 264 | 142 | 320 | 4.13e-13 | 70.5 |
MS.gene54957.t1 | MTR_8g076760 | 25.714 | 210 | 121 | 7 | 68 | 253 | 105 | 303 | 4.17e-13 | 69.7 |
MS.gene54957.t1 | MTR_8g027975 | 27.863 | 262 | 166 | 9 | 73 | 315 | 43 | 300 | 4.40e-13 | 70.1 |
MS.gene54957.t1 | MTR_8g027975 | 24.737 | 190 | 119 | 5 | 86 | 251 | 160 | 349 | 4.80e-12 | 67.0 |
MS.gene54957.t1 | MTR_5g009500 | 25.789 | 190 | 119 | 5 | 86 | 253 | 147 | 336 | 4.63e-13 | 70.1 |
MS.gene54957.t1 | MTR_5g009500 | 27.984 | 243 | 149 | 9 | 71 | 295 | 28 | 262 | 4.09e-12 | 67.0 |
MS.gene54957.t1 | MTR_4g119770 | 23.750 | 240 | 158 | 4 | 79 | 295 | 14 | 251 | 5.55e-13 | 68.6 |
MS.gene54957.t1 | MTR_7g084400 | 30.493 | 223 | 142 | 6 | 75 | 293 | 210 | 423 | 7.46e-13 | 70.1 |
MS.gene54957.t1 | MTR_4g119770 | 23.750 | 240 | 158 | 4 | 79 | 295 | 14 | 251 | 9.77e-13 | 68.9 |
MS.gene54957.t1 | MTR_4g119770 | 24.390 | 205 | 126 | 7 | 75 | 255 | 126 | 325 | 5.04e-11 | 63.5 |
MS.gene54957.t1 | MTR_8g096050 | 30.734 | 218 | 136 | 7 | 80 | 293 | 229 | 435 | 1.89e-12 | 68.9 |
MS.gene54957.t1 | MTR_7g084400 | 30.729 | 192 | 126 | 4 | 75 | 262 | 204 | 392 | 3.33e-12 | 67.8 |
MS.gene54957.t1 | MTR_7g109135 | 30.000 | 190 | 114 | 7 | 89 | 264 | 34 | 218 | 3.51e-12 | 65.9 |
MS.gene54957.t1 | MTR_3g098460 | 30.000 | 220 | 135 | 8 | 80 | 293 | 207 | 413 | 3.61e-12 | 67.8 |
MS.gene54957.t1 | MTR_7g109135 | 28.421 | 190 | 117 | 6 | 89 | 264 | 133 | 317 | 4.11e-12 | 67.0 |
MS.gene54957.t1 | MTR_7g109135 | 28.421 | 190 | 117 | 6 | 89 | 264 | 55 | 239 | 5.78e-12 | 65.5 |
MS.gene54957.t1 | MTR_4g114320 | 25.824 | 182 | 124 | 4 | 82 | 259 | 126 | 300 | 2.05e-11 | 65.1 |
MS.gene54957.t1 | MTR_2g436930 | 26.263 | 198 | 119 | 7 | 75 | 249 | 35 | 228 | 3.14e-11 | 63.2 |
MS.gene54957.t1 | MTR_5g073040 | 25.874 | 286 | 184 | 7 | 80 | 350 | 41 | 313 | 8.71e-11 | 62.8 |
MS.gene54957.t1 | MTR_1g087840 | 27.746 | 173 | 105 | 6 | 93 | 251 | 33 | 199 | 9.20e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54957.t1 | AT5G14040 | 78.904 | 365 | 69 | 2 | 7 | 363 | 2 | 366 | 0.0 | 574 |
MS.gene54957.t1 | AT3G48850 | 68.820 | 356 | 108 | 1 | 7 | 362 | 2 | 354 | 0.0 | 510 |
MS.gene54957.t1 | AT2G17270 | 50.993 | 302 | 143 | 3 | 68 | 368 | 11 | 308 | 4.69e-107 | 317 |
MS.gene54957.t1 | AT5G66380 | 26.636 | 214 | 122 | 8 | 68 | 258 | 102 | 303 | 5.61e-14 | 72.4 |
MS.gene54957.t1 | AT5G51050 | 29.474 | 285 | 168 | 12 | 80 | 348 | 225 | 492 | 6.64e-14 | 73.2 |
MS.gene54957.t1 | AT1G25380 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.91e-13 | 70.9 |
MS.gene54957.t1 | AT1G25380 | 27.895 | 190 | 121 | 6 | 89 | 266 | 131 | 316 | 2.91e-13 | 70.9 |
MS.gene54957.t1 | AT3G53940 | 28.729 | 181 | 114 | 6 | 80 | 251 | 182 | 356 | 8.77e-13 | 69.3 |
MS.gene54957.t1 | AT4G01100 | 25.794 | 252 | 157 | 8 | 71 | 295 | 32 | 280 | 1.38e-12 | 68.6 |
MS.gene54957.t1 | AT1G79900 | 25.253 | 198 | 144 | 3 | 67 | 264 | 98 | 291 | 1.39e-12 | 68.2 |
MS.gene54957.t1 | AT4G01100 | 26.778 | 239 | 157 | 8 | 71 | 295 | 32 | 266 | 1.97e-12 | 68.2 |
MS.gene54957.t1 | AT5G48970 | 25.373 | 201 | 120 | 6 | 75 | 249 | 132 | 328 | 1.27e-11 | 65.5 |
MS.gene54957.t1 | AT5G48970 | 23.431 | 239 | 159 | 4 | 80 | 295 | 23 | 260 | 2.92e-11 | 64.7 |
MS.gene54957.t1 | AT5G48970 | 25.373 | 201 | 120 | 6 | 75 | 249 | 61 | 257 | 1.29e-11 | 64.7 |
MS.gene54957.t1 | AT4G01100 | 25.571 | 219 | 149 | 6 | 88 | 295 | 1 | 216 | 3.85e-11 | 63.9 |
MS.gene54957.t1 | AT4G32400 | 28.261 | 184 | 117 | 4 | 72 | 249 | 205 | 379 | 4.35e-11 | 64.3 |
MS.gene54957.t1 | AT2G47490 | 27.174 | 184 | 122 | 5 | 91 | 265 | 129 | 309 | 8.63e-11 | 62.8 |
MS.gene54957.t1 | AT1G07030 | 27.374 | 179 | 120 | 4 | 74 | 249 | 36 | 207 | 8.90e-11 | 62.8 |
Find 122 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTCCGACTTGACAAATTT+TGG | 0.064803 | 7.2:-23601267 | None:intergenic |
GCACAGGGTGCTTGCAAATT+TGG | 0.141897 | 7.2:+23601048 | MS.gene54957:CDS |
CCTTTGCTGCACTCATTCTT+TGG | 0.207799 | 7.2:-23602280 | None:intergenic |
GTAGATCAAGGTCTTGTATT+TGG | 0.240422 | 7.2:-23601127 | None:intergenic |
GTGAATAACCGGTAGGGTTT+TGG | 0.271570 | 7.2:-23599648 | None:intergenic |
CACAGGGTGCTTGCAAATTT+GGG | 0.272981 | 7.2:+23601049 | MS.gene54957:CDS |
ACAAGGGATTAGTGCCTCTA+TGG | 0.295974 | 7.2:+23601421 | MS.gene54957:CDS |
ATCACCAACTGTTGCTCCTT+TGG | 0.305945 | 7.2:-23602404 | None:intergenic |
GTCAAGTCGGAAGGAGCTTT+GGG | 0.313946 | 7.2:+23601276 | MS.gene54957:CDS |
CTGCACTCATTCTTTGGTTG+TGG | 0.319170 | 7.2:-23602274 | None:intergenic |
CCTTCTCCTAAGGAACCTTT+TGG | 0.320200 | 7.2:+23599752 | MS.gene54957:CDS |
ACCAAGACCTCTTGCAAAAC+CGG | 0.326720 | 7.2:-23601235 | None:intergenic |
TGCACTCATTCTTTGGTTGT+GGG | 0.330467 | 7.2:-23602273 | None:intergenic |
TTCTATGCTGCTTGTACTGC+TGG | 0.334701 | 7.2:+23599800 | MS.gene54957:CDS |
GGCGCGGCGGCGGAAGGAGC+GGG | 0.336833 | 7.2:-23599689 | None:intergenic |
CCGCCTTCACTCCGTGGAAC+TGG | 0.348054 | 7.2:+23599710 | MS.gene54957:CDS |
TTGTATTTGGCTGCATACTC+AGG | 0.350724 | 7.2:-23601114 | None:intergenic |
TGTCAAGTCGGAAGGAGCTT+TGG | 0.366299 | 7.2:+23601275 | MS.gene54957:CDS |
TTTGCTGGTGGATACATTGC+TGG | 0.369619 | 7.2:+23602322 | MS.gene54957:CDS |
CGGCGCGGCGGCGGAAGGAG+CGG | 0.370068 | 7.2:-23599690 | None:intergenic |
GTTCAAGGAGCAGGGAGTTA+AGG | 0.373432 | 7.2:+23600984 | MS.gene54957:CDS |
CGTTGCACTTTGCCCATTCG+AGG | 0.378339 | 7.2:+23601185 | MS.gene54957:CDS |
TTCAAGGAGCAGGGAGTTAA+GGG | 0.378873 | 7.2:+23600985 | MS.gene54957:CDS |
CCTCTCCGTATTGTTATGAT+TGG | 0.392836 | 7.2:+23602571 | MS.gene54957:CDS |
GTTATGATTGGAACACTTAC+CGG | 0.392999 | 7.2:+23602583 | MS.gene54957:CDS |
GGCGGCGGAAGGAGCGGGAC+CGG | 0.404628 | 7.2:-23599684 | None:intergenic |
TCCTTTGCAATCTCTGCAAT+GGG | 0.410320 | 7.2:-23602765 | None:intergenic |
ATGCAGGCTGTTGCGAAGTT+TGG | 0.417122 | 7.2:+23602520 | MS.gene54957:intron |
CTGACGATCTGGTGAATAAC+CGG | 0.417433 | 7.2:-23599659 | None:intergenic |
AAGTACAAGAGCATCTCATC+AGG | 0.418546 | 7.2:+23600949 | MS.gene54957:CDS |
GATGCTTTCAAAGTCTTTGT+GGG | 0.421116 | 7.2:+23602625 | MS.gene54957:CDS |
TTGCAAGAGGTCTTGGTGAT+GGG | 0.421210 | 7.2:+23601241 | MS.gene54957:CDS |
TGATGCTTTCAAAGTCTTTG+TGG | 0.429250 | 7.2:+23602624 | MS.gene54957:CDS |
ATTCACCAGATCGTCAGTTC+CGG | 0.433147 | 7.2:+23599665 | MS.gene54957:CDS |
AAGACCTTGATCTACCTTGC+TGG | 0.435876 | 7.2:+23601135 | MS.gene54957:CDS |
AAGTACTATTCTGATATTGC+TGG | 0.438339 | 7.2:+23601090 | MS.gene54957:CDS |
GAGATGCTCTTGTACTTGGC+AGG | 0.444922 | 7.2:-23600943 | None:intergenic |
TTCCTTTGCAATCTCTGCAA+TGG | 0.446057 | 7.2:-23602766 | None:intergenic |
TTTGCAAGAGGTCTTGGTGA+TGG | 0.446061 | 7.2:+23601240 | MS.gene54957:CDS |
TCACTCCGTGGAACTGGATC+CGG | 0.455713 | 7.2:+23599716 | MS.gene54957:CDS |
GCAATCTCTGCAATGGGAGC+AGG | 0.456052 | 7.2:-23602759 | None:intergenic |
AAGAGCATCTCATCAGGGTT+TGG | 0.458213 | 7.2:+23600955 | MS.gene54957:CDS |
GAGTGAAGGCGGCGCGGCGG+CGG | 0.460339 | 7.2:-23599699 | None:intergenic |
CTCATTCTTTGGTTGTGGGA+TGG | 0.461022 | 7.2:-23602269 | None:intergenic |
GAAGGCGGCGCGGCGGCGGA+AGG | 0.466553 | 7.2:-23599695 | None:intergenic |
TGATGAGATGCTCTTGTACT+TGG | 0.466999 | 7.2:-23600947 | None:intergenic |
ATCTTGCCAAAAGGTTCCTT+AGG | 0.467490 | 7.2:-23599758 | None:intergenic |
GGATGGGTCCCTACATTACT+TGG | 0.467879 | 7.2:+23601018 | MS.gene54957:CDS |
GGAGCAGCACCACCGGTTGT+TGG | 0.480665 | 7.2:-23602738 | None:intergenic |
ATATTTGTTAGGCCAACAAC+CGG | 0.488505 | 7.2:+23602726 | MS.gene54957:intron |
CGGGACCGGAACTGACGATC+TGG | 0.489410 | 7.2:-23599670 | None:intergenic |
CAAGGGATTAGTGCCTCTAT+GGG | 0.492057 | 7.2:+23601422 | MS.gene54957:CDS |
TTATGATTGCAGGCTGTACA+AGG | 0.497538 | 7.2:+23601404 | MS.gene54957:intron |
CTCAACAATGGTCTCAAAAG+AGG | 0.497947 | 7.2:-23602230 | None:intergenic |
ATTCATGATTCCTTCTCCTA+AGG | 0.502454 | 7.2:+23599742 | MS.gene54957:CDS |
ATATATTCCCCACTGGGCTC+CGG | 0.504355 | 7.2:-23602602 | None:intergenic |
CCAAAGAATGAGTGCAGCAA+AGG | 0.506478 | 7.2:+23602280 | MS.gene54957:CDS |
GTTGCGAAGTTTGGTGTGGT+TGG | 0.508050 | 7.2:+23602529 | MS.gene54957:CDS |
ATTACTTGGTTACAGTGCAC+AGG | 0.515158 | 7.2:+23601032 | MS.gene54957:CDS |
ATGATTCCTTCATTTCTCTA+CGG | 0.518236 | 7.2:+23599617 | MS.gene54957:CDS |
TTCTTCCACCAAAACCCTAC+CGG | 0.523169 | 7.2:+23599640 | MS.gene54957:CDS |
AAAGAGACAAGGTTATCAGC+AGG | 0.524035 | 7.2:-23602370 | None:intergenic |
ATGAAGGAATCATGTTTCTA+CGG | 0.525899 | 7.2:-23599607 | None:intergenic |
GGGAGCAGGAGCAGCACCAC+CGG | 0.526192 | 7.2:-23602745 | None:intergenic |
TACATCTCGATCTTGCCAAA+AGG | 0.527813 | 7.2:-23599767 | None:intergenic |
CTTAGTCAAGTGTAATATGC+AGG | 0.531917 | 7.2:+23599871 | MS.gene54957:CDS |
GCACTGTAACCAAGTAATGT+AGG | 0.533624 | 7.2:-23601027 | None:intergenic |
CCAAAAGGTTCCTTAGGAGA+AGG | 0.534266 | 7.2:-23599752 | None:intergenic |
GAAGAACCGTAGAGAAATGA+AGG | 0.537076 | 7.2:-23599623 | None:intergenic |
GGACTTTAACAGCCTCGAAT+GGG | 0.537558 | 7.2:-23601197 | None:intergenic |
TGTATTTGGCTGCATACTCA+GGG | 0.537672 | 7.2:-23601113 | None:intergenic |
GTACAAGCAGCATAGAAAGC+AGG | 0.538163 | 7.2:-23599794 | None:intergenic |
AAGCATCATATATTCCCCAC+TGG | 0.538260 | 7.2:-23602609 | None:intergenic |
AACACTTACCGGAGCCCAGT+GGG | 0.541109 | 7.2:+23602594 | MS.gene54957:CDS |
TATGCTGCTTGTACTGCTGG+TGG | 0.545880 | 7.2:+23599803 | MS.gene54957:CDS |
CAAAGAATGAGTGCAGCAAA+GGG | 0.546393 | 7.2:+23602281 | MS.gene54957:CDS |
CACTGTAACCAAGTAATGTA+GGG | 0.552514 | 7.2:-23601026 | None:intergenic |
CCAAAATTTGTCAAGTCGGA+AGG | 0.555895 | 7.2:+23601267 | MS.gene54957:CDS |
CCAAGACCTCTTGCAAAACC+GGG | 0.555939 | 7.2:-23601234 | None:intergenic |
CGGACTTTAACAGCCTCGAA+TGG | 0.556736 | 7.2:-23601198 | None:intergenic |
TGCTGGTTCAGCATCTGCTG+AGG | 0.562706 | 7.2:+23601152 | MS.gene54957:CDS |
AGAAGGAATCATGAATCTAC+CGG | 0.563282 | 7.2:-23599735 | None:intergenic |
TGCAGCAAAGGGCTGCAACT+TGG | 0.564769 | 7.2:+23602292 | MS.gene54957:CDS |
GTCCGTGTTCAAACTCAGCC+CGG | 0.566951 | 7.2:+23601216 | MS.gene54957:CDS |
CTTATAGATTTGCTCAACAA+TGG | 0.571646 | 7.2:-23602242 | None:intergenic |
GCCGCGCCGCCTTCACTCCG+TGG | 0.578747 | 7.2:+23599704 | MS.gene54957:CDS |
GTGTTCCAATCATAACAATA+CGG | 0.581864 | 7.2:-23602576 | None:intergenic |
GATCCAGTTCCACGGAGTGA+AGG | 0.581952 | 7.2:-23599713 | None:intergenic |
TGAACCAGCAAGGTAGATCA+AGG | 0.583686 | 7.2:-23601139 | None:intergenic |
ATGCTTTCAAAGTCTTTGTG+GGG | 0.587996 | 7.2:+23602626 | MS.gene54957:CDS |
AGCATCATATATTCCCCACT+GGG | 0.588188 | 7.2:-23602608 | None:intergenic |
CGTTGTTCAGAAAAGAGACA+AGG | 0.592020 | 7.2:-23602381 | None:intergenic |
GGAATCTGCCTTCCCCATAG+AGG | 0.592926 | 7.2:-23601435 | None:intergenic |
CGATCTGGTGAATAACCGGT+AGG | 0.594124 | 7.2:-23599655 | None:intergenic |
AATACGGAGAGGGAGACCTC+TGG | 0.599896 | 7.2:-23602560 | None:intergenic |
GTGGTTGGTCTCTTCACCAG+AGG | 0.608443 | 7.2:+23602544 | MS.gene54957:CDS |
GGCTGTTGCGAAGTTTGGTG+TGG | 0.612493 | 7.2:+23602525 | MS.gene54957:intron |
GATTAGTGCCTCTATGGGGA+AGG | 0.612930 | 7.2:+23601427 | MS.gene54957:CDS |
CCAGTTCCACGGAGTGAAGG+CGG | 0.613356 | 7.2:-23599710 | None:intergenic |
AACGCCAAAGGAGCAACAGT+TGG | 0.613664 | 7.2:+23602400 | MS.gene54957:CDS |
GCTGGTGGAATTCTTAGCTG+TGG | 0.615544 | 7.2:+23599818 | MS.gene54957:CDS |
ACGGAGTGAAGGCGGCGCGG+CGG | 0.615971 | 7.2:-23599702 | None:intergenic |
GCTCCCAAAATTTGTCAAGT+CGG | 0.621493 | 7.2:+23601263 | MS.gene54957:CDS |
AGATGCTCTTGTACTTGGCA+GGG | 0.621873 | 7.2:-23600942 | None:intergenic |
CAATCATAACAATACGGAGA+GGG | 0.625979 | 7.2:-23602570 | None:intergenic |
TCAAGTCGGAAGGAGCTTTG+GGG | 0.630516 | 7.2:+23601277 | MS.gene54957:CDS |
TTACACTTGACTAAGTCAAG+AGG | 0.631255 | 7.2:-23599863 | None:intergenic |
TTACTTGGTTACAGTGCACA+GGG | 0.631543 | 7.2:+23601033 | MS.gene54957:CDS |
TCCCATTGCAGAGATTGCAA+AGG | 0.636460 | 7.2:+23602764 | MS.gene54957:CDS |
CAGCAGATGCTGAACCAGCA+AGG | 0.642348 | 7.2:-23601149 | None:intergenic |
ATCTACCGGATCCAGTTCCA+CGG | 0.647055 | 7.2:-23599721 | None:intergenic |
GATCTGGTGAATAACCGGTA+GGG | 0.649771 | 7.2:-23599654 | None:intergenic |
TATGATTGCAGGCTGTACAA+GGG | 0.654041 | 7.2:+23601405 | MS.gene54957:intron |
TCCACGGAGTGAAGGCGGCG+CGG | 0.654298 | 7.2:-23599705 | None:intergenic |
TTTGTTAGGCCAACAACCGG+TGG | 0.658305 | 7.2:+23602729 | MS.gene54957:intron |
AACCGGGCTGAGTTTGAACA+CGG | 0.669826 | 7.2:-23601218 | None:intergenic |
AGTACAAGAGCATCTCATCA+GGG | 0.671144 | 7.2:+23600950 | MS.gene54957:CDS |
GTAATGTAGGGACCCATCCG+CGG | 0.692836 | 7.2:-23601014 | None:intergenic |
GAACACTTACCGGAGCCCAG+TGG | 0.694776 | 7.2:+23602593 | MS.gene54957:CDS |
AAGGGATTAGTGCCTCTATG+GGG | 0.721830 | 7.2:+23601423 | MS.gene54957:CDS |
ACACTTACCGGAGCCCAGTG+GGG | 0.735878 | 7.2:+23602595 | MS.gene54957:CDS |
CCAATCATAACAATACGGAG+AGG | 0.738908 | 7.2:-23602571 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTTGTTATATTTGTT+AGG | + | chr7.2:23602715-23602734 | MS.gene54957:intron | 10.0% |
!! | AAAATAACAAAAAAGGATTA+TGG | - | chr7.2:23601953-23601972 | None:intergenic | 15.0% |
!! | AATTACTAGTATTGTTAAAC+TGG | + | chr7.2:23600826-23600845 | MS.gene54957:intron | 20.0% |
!! | ACTAAATATATTATGATTGC+AGG | + | chr7.2:23601394-23601413 | MS.gene54957:intron | 20.0% |
!! | ACTAATAAAATCGAAATTCT+AGG | - | chr7.2:23600149-23600168 | None:intergenic | 20.0% |
!! | GCTGTTAAAATTTATCATTT+AGG | + | chr7.2:23601698-23601717 | MS.gene54957:intron | 20.0% |
!! | TGTGATGAAATATTCATATT+TGG | + | chr7.2:23600292-23600311 | MS.gene54957:intron | 20.0% |
!! | TGTTGAAGATTATTCATATT+TGG | + | chr7.2:23600554-23600573 | MS.gene54957:intron | 20.0% |
!! | TTTGTAATAAATAGCATTTG+CGG | - | chr7.2:23600727-23600746 | None:intergenic | 20.0% |
!!! | TGATATATTTGTTCTAAAGT+GGG | + | chr7.2:23602676-23602695 | MS.gene54957:intron | 20.0% |
!!! | TTTTAGAAAATTCATTCAAG+AGG | + | chr7.2:23601747-23601766 | MS.gene54957:intron | 20.0% |
! | AAGAAAACTGCAAAATTCAA+TGG | - | chr7.2:23600202-23600221 | None:intergenic | 25.0% |
! | AATAGGAAGATAACTTATGA+TGG | + | chr7.2:23602127-23602146 | MS.gene54957:intron | 25.0% |
! | CTAAAGACATTCAAAAGAAT+GGG | - | chr7.2:23601804-23601823 | None:intergenic | 25.0% |
! | TAGAAGATATATGAGTAAGT+AGG | - | chr7.2:23601990-23602009 | None:intergenic | 25.0% |
! | TAGAATTGGAATTGTTTAGT+TGG | + | chr7.2:23600864-23600883 | MS.gene54957:intron | 25.0% |
! | TCTAAAGACATTCAAAAGAA+TGG | - | chr7.2:23601805-23601824 | None:intergenic | 25.0% |
! | TGAATGTTGTTGAATTGTTA+TGG | + | chr7.2:23600023-23600042 | MS.gene54957:intron | 25.0% |
! | TGATTGTGATACTGTTATAT+TGG | + | chr7.2:23600055-23600074 | MS.gene54957:intron | 25.0% |
!! | TTATATCCTTGACAAACTTT+TGG | - | chr7.2:23601776-23601795 | None:intergenic | 25.0% |
!!! | GCGATTTATGTTTGATTTTA+AGG | + | chr7.2:23599948-23599967 | MS.gene54957:intron | 25.0% |
!!! | GTGATATATTTGTTCTAAAG+TGG | + | chr7.2:23602675-23602694 | MS.gene54957:intron | 25.0% |
!!! | GTTTTACATGTCTTATTATC+AGG | - | chr7.2:23602170-23602189 | None:intergenic | 25.0% |
!!! | TTTGATTTTTGTTGATCTAG+TGG | + | chr7.2:23600233-23600252 | MS.gene54957:intron | 25.0% |
AAGTACTATTCTGATATTGC+TGG | + | chr7.2:23601090-23601109 | MS.gene54957:CDS | 30.0% | |
ACAGCAAAAATATCAACAGA+CGG | - | chr7.2:23601683-23601702 | None:intergenic | 30.0% | |
ATGATTCCTTCATTTCTCTA+CGG | + | chr7.2:23599617-23599636 | MS.gene54957:CDS | 30.0% | |
CAAAAAAATGATGTGCAAAC+TGG | - | chr7.2:23601574-23601593 | None:intergenic | 30.0% | |
CAAAATCTCAACAGAGTAAA+AGG | - | chr7.2:23600507-23600526 | None:intergenic | 30.0% | |
CTCATTGGTATGAATATTGA+TGG | + | chr7.2:23602041-23602060 | MS.gene54957:intron | 30.0% | |
CTTCAAATGTAGAACTTACA+TGG | - | chr7.2:23601459-23601478 | None:intergenic | 30.0% | |
GTGTTCCAATCATAACAATA+CGG | - | chr7.2:23602579-23602598 | None:intergenic | 30.0% | |
TAAAACTCATAAGTAGAAGC+AGG | - | chr7.2:23601732-23601751 | None:intergenic | 30.0% | |
TGAGAAATGATGAAACTCAT+TGG | + | chr7.2:23602026-23602045 | MS.gene54957:intron | 30.0% | |
TGTCATTATGTGTTACGAAT+AGG | + | chr7.2:23602110-23602129 | MS.gene54957:intron | 30.0% | |
! | AGATTCAGCAATTTAAGACT+AGG | - | chr7.2:23600765-23600784 | None:intergenic | 30.0% |
! | ATAACTTATGATGGAACCTA+AGG | + | chr7.2:23602136-23602155 | MS.gene54957:intron | 30.0% |
! | ATGAAGGAATCATGTTTCTA+CGG | - | chr7.2:23599610-23599629 | None:intergenic | 30.0% |
! | CTTATAGATTTGCTCAACAA+TGG | - | chr7.2:23602245-23602264 | None:intergenic | 30.0% |
! | TAACTTATGATGGAACCTAA+GGG | + | chr7.2:23602137-23602156 | MS.gene54957:intron | 30.0% |
! | TAGATCTGAGAAATGCTTTT+AGG | + | chr7.2:23599994-23600013 | MS.gene54957:intron | 30.0% |
!! | AGTCTGTTGATATTTTGAGT+AGG | + | chr7.2:23600262-23600281 | MS.gene54957:intron | 30.0% |
!! | CTTGTTGTATGTTAAGTTGA+AGG | + | chr7.2:23600105-23600124 | MS.gene54957:intron | 30.0% |
!! | GGTGTTTATTTGATTTGTGA+TGG | + | chr7.2:23599969-23599988 | MS.gene54957:intron | 30.0% |
!!! | ATTTTGTCGTTTTTAACCAC+AGG | - | chr7.2:23600435-23600454 | None:intergenic | 30.0% |
AAGGCAGCTAGAATAACAAA+AGG | - | chr7.2:23600488-23600507 | None:intergenic | 35.0% | |
AGAAGGAATCATGAATCTAC+CGG | - | chr7.2:23599738-23599757 | None:intergenic | 35.0% | |
ATCTATGCTAGGAATTAGGA+TGG | + | chr7.2:23601365-23601384 | MS.gene54957:intron | 35.0% | |
ATGCTTTCAAAGTCTTTGTG+GGG | + | chr7.2:23602626-23602645 | MS.gene54957:CDS | 35.0% | |
ATTCATGATTCCTTCTCCTA+AGG | + | chr7.2:23599742-23599761 | MS.gene54957:CDS | 35.0% | |
CAATCATAACAATACGGAGA+GGG | - | chr7.2:23602573-23602592 | None:intergenic | 35.0% | |
CACTGTAACCAAGTAATGTA+GGG | - | chr7.2:23601029-23601048 | None:intergenic | 35.0% | |
CTTAGTCAAGTGTAATATGC+AGG | + | chr7.2:23599871-23599890 | MS.gene54957:CDS | 35.0% | |
CTTGATCTATGCTAGGAATT+AGG | + | chr7.2:23601361-23601380 | MS.gene54957:intron | 35.0% | |
GATGCTTTCAAAGTCTTTGT+GGG | + | chr7.2:23602625-23602644 | MS.gene54957:CDS | 35.0% | |
GTTATGATTGGAACACTTAC+CGG | + | chr7.2:23602583-23602602 | MS.gene54957:CDS | 35.0% | |
TCTATGCTAGGAATTAGGAT+GGG | + | chr7.2:23601366-23601385 | MS.gene54957:intron | 35.0% | |
TGATGCTTTCAAAGTCTTTG+TGG | + | chr7.2:23602624-23602643 | MS.gene54957:CDS | 35.0% | |
TGTTAAACTGGTTGTGTTGT+TGG | + | chr7.2:23600838-23600857 | MS.gene54957:intron | 35.0% | |
TGTTATCTACTGTTTGATGC+AGG | + | chr7.2:23602504-23602523 | MS.gene54957:intron | 35.0% | |
TTACACTTGACTAAGTCAAG+AGG | - | chr7.2:23599866-23599885 | None:intergenic | 35.0% | |
! | AACTTATGATGGAACCTAAG+GGG | + | chr7.2:23602138-23602157 | MS.gene54957:intron | 35.0% |
! | ATATTTGTTAGGCCAACAAC+CGG | + | chr7.2:23602726-23602745 | MS.gene54957:intron | 35.0% |
! | GCTTTTCTTCTTCGTTTTCT+TGG | + | chr7.2:23599898-23599917 | MS.gene54957:intron | 35.0% |
! | GTAGATCAAGGTCTTGTATT+TGG | - | chr7.2:23601130-23601149 | None:intergenic | 35.0% |
!! | AATTGACTTGAAGTCCAACA+AGG | - | chr7.2:23601645-23601664 | None:intergenic | 35.0% |
!! | CTTCCGACTTGACAAATTTT+GGG | - | chr7.2:23601269-23601288 | None:intergenic | 35.0% |
!! | TGTGTTGTTGGTGTTAGAAT+TGG | + | chr7.2:23600850-23600869 | MS.gene54957:intron | 35.0% |
AAAGAGACAAGGTTATCAGC+AGG | - | chr7.2:23602373-23602392 | None:intergenic | 40.0% | |
AAGCATCATATATTCCCCAC+TGG | - | chr7.2:23602612-23602631 | None:intergenic | 40.0% | |
AAGTTGAAGGATCGCTTGAT+TGG | + | chr7.2:23600118-23600137 | MS.gene54957:intron | 40.0% | |
ACTGCAATATCCTTGTTGAC+TGG | + | chr7.2:23601496-23601515 | MS.gene54957:intron | 40.0% | |
AGCATCATATATTCCCCACT+GGG | - | chr7.2:23602611-23602630 | None:intergenic | 40.0% | |
AGGAAGCCAAAAGTTTGTCA+AGG | + | chr7.2:23601767-23601786 | MS.gene54957:intron | 40.0% | |
ATCTTGCCAAAAGGTTCCTT+AGG | - | chr7.2:23599761-23599780 | None:intergenic | 40.0% | |
ATTACTTGGTTACAGTGCAC+AGG | + | chr7.2:23601032-23601051 | MS.gene54957:CDS | 40.0% | |
CAAAGAATGAGTGCAGCAAA+GGG | + | chr7.2:23602281-23602300 | MS.gene54957:CDS | 40.0% | |
CCAAAATTTGTCAAGTCGGA+AGG | + | chr7.2:23601267-23601286 | MS.gene54957:CDS | 40.0% | |
CCAATCATAACAATACGGAG+AGG | - | chr7.2:23602574-23602593 | None:intergenic | 40.0% | |
CCTCTCCGTATTGTTATGAT+TGG | + | chr7.2:23602571-23602590 | MS.gene54957:CDS | 40.0% | |
CGTTGTTCAGAAAAGAGACA+AGG | - | chr7.2:23602384-23602403 | None:intergenic | 40.0% | |
CTCAACAATGGTCTCAAAAG+AGG | - | chr7.2:23602233-23602252 | None:intergenic | 40.0% | |
GAAGAACCGTAGAGAAATGA+AGG | - | chr7.2:23599626-23599645 | None:intergenic | 40.0% | |
GCACTGTAACCAAGTAATGT+AGG | - | chr7.2:23601030-23601049 | None:intergenic | 40.0% | |
GCTCCCAAAATTTGTCAAGT+CGG | + | chr7.2:23601263-23601282 | MS.gene54957:CDS | 40.0% | |
TACATCTCGATCTTGCCAAA+AGG | - | chr7.2:23599770-23599789 | None:intergenic | 40.0% | |
TAGTTATGAAACACAGCCAC+CGG | + | chr7.2:23600381-23600400 | MS.gene54957:intron | 40.0% | |
TATGATTGCAGGCTGTACAA+GGG | + | chr7.2:23601405-23601424 | MS.gene54957:intron | 40.0% | |
TCCAACAAGGTAGTGTAACA+TGG | - | chr7.2:23601632-23601651 | None:intergenic | 40.0% | |
TCCTTTGCAATCTCTGCAAT+GGG | - | chr7.2:23602768-23602787 | None:intergenic | 40.0% | |
TGATGAGATGCTCTTGTACT+TGG | - | chr7.2:23600950-23600969 | None:intergenic | 40.0% | |
TGCACTCATTCTTTGGTTGT+GGG | - | chr7.2:23602276-23602295 | None:intergenic | 40.0% | |
TGTATTTGGCTGCATACTCA+GGG | - | chr7.2:23601116-23601135 | None:intergenic | 40.0% | |
TGTTGCTCTTGATCTATGCT+AGG | + | chr7.2:23601354-23601373 | MS.gene54957:intron | 40.0% | |
TTACTTGGTTACAGTGCACA+GGG | + | chr7.2:23601033-23601052 | MS.gene54957:CDS | 40.0% | |
TTATCAGGTTTCAACCCCTT+AGG | - | chr7.2:23602155-23602174 | None:intergenic | 40.0% | |
TTATGATTGCAGGCTGTACA+AGG | + | chr7.2:23601404-23601423 | MS.gene54957:intron | 40.0% | |
TTCCTTTGCAATCTCTGCAA+TGG | - | chr7.2:23602769-23602788 | None:intergenic | 40.0% | |
TTGTATTTGGCTGCATACTC+AGG | - | chr7.2:23601117-23601136 | None:intergenic | 40.0% | |
! | CTTCTTCGTTTTCTTGGATC+TGG | + | chr7.2:23599904-23599923 | MS.gene54957:intron | 40.0% |
! | TCTTTTCTGAACAACGCCAA+AGG | + | chr7.2:23602388-23602407 | MS.gene54957:CDS | 40.0% |
! | TTCAAAGTGTCCAGTCAACA+AGG | - | chr7.2:23601509-23601528 | None:intergenic | 40.0% |
!! | AAGTACAAGAGCATCTCATC+AGG | + | chr7.2:23600949-23600968 | MS.gene54957:CDS | 40.0% |
!! | AGTACAAGAGCATCTCATCA+GGG | + | chr7.2:23600950-23600969 | MS.gene54957:CDS | 40.0% |
!! | CCTTCCGACTTGACAAATTT+TGG | - | chr7.2:23601270-23601289 | None:intergenic | 40.0% |
!!! | AGGGTTTGGAGTTTTGTTCA+AGG | + | chr7.2:23600969-23600988 | MS.gene54957:CDS | 40.0% |
AAGACCTTGATCTACCTTGC+TGG | + | chr7.2:23601135-23601154 | MS.gene54957:CDS | 45.0% | |
ACCAAGACCTCTTGCAAAAC+CGG | - | chr7.2:23601238-23601257 | None:intergenic | 45.0% | |
AGATGCTCTTGTACTTGGCA+GGG | - | chr7.2:23600945-23600964 | None:intergenic | 45.0% | |
ATCACCAACTGTTGCTCCTT+TGG | - | chr7.2:23602407-23602426 | None:intergenic | 45.0% | |
ATTCACCAGATCGTCAGTTC+CGG | + | chr7.2:23599665-23599684 | MS.gene54957:CDS | 45.0% | |
CATTGACACATCAACACCTG+TGG | + | chr7.2:23600416-23600435 | MS.gene54957:intron | 45.0% | |
CCAAAAGGTTCCTTAGGAGA+AGG | - | chr7.2:23599755-23599774 | None:intergenic | 45.0% | |
CCAAAGAATGAGTGCAGCAA+AGG | + | chr7.2:23602280-23602299 | MS.gene54957:CDS | 45.0% | |
CCTTTGCTGCACTCATTCTT+TGG | - | chr7.2:23602283-23602302 | None:intergenic | 45.0% | |
CTCATTCTTTGGTTGTGGGA+TGG | - | chr7.2:23602272-23602291 | None:intergenic | 45.0% | |
CTGACGATCTGGTGAATAAC+CGG | - | chr7.2:23599662-23599681 | None:intergenic | 45.0% | |
CTGCACTCATTCTTTGGTTG+TGG | - | chr7.2:23602277-23602296 | None:intergenic | 45.0% | |
GATCTGGTGAATAACCGGTA+GGG | - | chr7.2:23599657-23599676 | None:intergenic | 45.0% | |
GCCATGTTACACTACCTTGT+TGG | + | chr7.2:23601628-23601647 | MS.gene54957:intron | 45.0% | |
GGACTTTAACAGCCTCGAAT+GGG | - | chr7.2:23601200-23601219 | None:intergenic | 45.0% | |
GTACAAGCAGCATAGAAAGC+AGG | - | chr7.2:23599797-23599816 | None:intergenic | 45.0% | |
GTTACTTCCGTTACCATCTG+AGG | + | chr7.2:23601544-23601563 | MS.gene54957:intron | 45.0% | |
TCCCATTGCAGAGATTGCAA+AGG | + | chr7.2:23602764-23602783 | MS.gene54957:CDS | 45.0% | |
TGAACCAGCAAGGTAGATCA+AGG | - | chr7.2:23601142-23601161 | None:intergenic | 45.0% | |
TGGAATGCCTCAGATGGTAA+CGG | - | chr7.2:23601554-23601573 | None:intergenic | 45.0% | |
TTCAAGGAGCAGGGAGTTAA+GGG | + | chr7.2:23600985-23601004 | MS.gene54957:CDS | 45.0% | |
TTCTTCCACCAAAACCCTAC+CGG | + | chr7.2:23599640-23599659 | MS.gene54957:CDS | 45.0% | |
TTTGCAAGAGGTCTTGGTGA+TGG | + | chr7.2:23601240-23601259 | MS.gene54957:CDS | 45.0% | |
! | AAGGGATTAGTGCCTCTATG+GGG | + | chr7.2:23601423-23601442 | MS.gene54957:CDS | 45.0% |
! | ACAAGGGATTAGTGCCTCTA+TGG | + | chr7.2:23601421-23601440 | MS.gene54957:CDS | 45.0% |
! | CAAGGGATTAGTGCCTCTAT+GGG | + | chr7.2:23601422-23601441 | MS.gene54957:CDS | 45.0% |
! | CACAGGGTGCTTGCAAATTT+GGG | + | chr7.2:23601049-23601068 | MS.gene54957:CDS | 45.0% |
! | CCTTCTCCTAAGGAACCTTT+TGG | + | chr7.2:23599752-23599771 | MS.gene54957:CDS | 45.0% |
! | GTGAATAACCGGTAGGGTTT+TGG | - | chr7.2:23599651-23599670 | None:intergenic | 45.0% |
! | TTCTATGCTGCTTGTACTGC+TGG | + | chr7.2:23599800-23599819 | MS.gene54957:CDS | 45.0% |
! | TTGCAAGAGGTCTTGGTGAT+GGG | + | chr7.2:23601241-23601260 | MS.gene54957:CDS | 45.0% |
! | TTTGCTGGTGGATACATTGC+TGG | + | chr7.2:23602322-23602341 | MS.gene54957:CDS | 45.0% |
!! | AAGAGCATCTCATCAGGGTT+TGG | + | chr7.2:23600955-23600974 | MS.gene54957:CDS | 45.0% |
!! | AATAACCGGTAGGGTTTTGG+TGG | - | chr7.2:23599648-23599667 | None:intergenic | 45.0% |
!!! | CAACTTGGTGTCAGTTTTGC+TGG | + | chr7.2:23602307-23602326 | MS.gene54957:CDS | 45.0% |
!!! | GGAGTTTTGTTCAAGGAGCA+GGG | + | chr7.2:23600976-23600995 | MS.gene54957:CDS | 45.0% |
!!! | TGGAGTTTTGTTCAAGGAGC+AGG | + | chr7.2:23600975-23600994 | MS.gene54957:CDS | 45.0% |
!! | AAAAAAAAAAATAACAAAAA+AGG | - | chr7.2:23601960-23601979 | None:intergenic | 5.0% |
!! | AATATAACAAAAAATTTATT+AGG | - | chr7.2:23602711-23602730 | None:intergenic | 5.0% |
AACCGGGCTGAGTTTGAACA+CGG | - | chr7.2:23601221-23601240 | None:intergenic | 50.0% | |
AACGCCAAAGGAGCAACAGT+TGG | + | chr7.2:23602400-23602419 | MS.gene54957:CDS | 50.0% | |
ATATATTCCCCACTGGGCTC+CGG | - | chr7.2:23602605-23602624 | None:intergenic | 50.0% | |
ATCTACCGGATCCAGTTCCA+CGG | - | chr7.2:23599724-23599743 | None:intergenic | 50.0% | |
ATGCAGGCTGTTGCGAAGTT+TGG | + | chr7.2:23602520-23602539 | MS.gene54957:intron | 50.0% | |
CCAAGACCTCTTGCAAAACC+GGG | - | chr7.2:23601237-23601256 | None:intergenic | 50.0% | |
CGATCTGGTGAATAACCGGT+AGG | - | chr7.2:23599658-23599677 | None:intergenic | 50.0% | |
CGGACTTTAACAGCCTCGAA+TGG | - | chr7.2:23601201-23601220 | None:intergenic | 50.0% | |
GAGATGCTCTTGTACTTGGC+AGG | - | chr7.2:23600946-23600965 | None:intergenic | 50.0% | |
GATTAGTGCCTCTATGGGGA+AGG | + | chr7.2:23601427-23601446 | MS.gene54957:CDS | 50.0% | |
GCAAACTGGAATGCCTCAGA+TGG | - | chr7.2:23601560-23601579 | None:intergenic | 50.0% | |
GCTGGTGGAATTCTTAGCTG+TGG | + | chr7.2:23599818-23599837 | MS.gene54957:CDS | 50.0% | |
GGATGGGTCCCTACATTACT+TGG | + | chr7.2:23601018-23601037 | MS.gene54957:CDS | 50.0% | |
GTCAAGTCGGAAGGAGCTTT+GGG | + | chr7.2:23601276-23601295 | MS.gene54957:CDS | 50.0% | |
GTTCAAGGAGCAGGGAGTTA+AGG | + | chr7.2:23600984-23601003 | MS.gene54957:CDS | 50.0% | |
TCAAGTCGGAAGGAGCTTTG+GGG | + | chr7.2:23601277-23601296 | MS.gene54957:CDS | 50.0% | |
TGTCAAGTCGGAAGGAGCTT+TGG | + | chr7.2:23601275-23601294 | MS.gene54957:CDS | 50.0% | |
TTTGTTAGGCCAACAACCGG+TGG | + | chr7.2:23602729-23602748 | MS.gene54957:intron | 50.0% | |
! | GCACAGGGTGCTTGCAAATT+TGG | + | chr7.2:23601048-23601067 | MS.gene54957:CDS | 50.0% |
! | TATGCTGCTTGTACTGCTGG+TGG | + | chr7.2:23599803-23599822 | MS.gene54957:CDS | 50.0% |
!! | GGAGTTAAGGGCTTTTTCCG+CGG | + | chr7.2:23600997-23601016 | MS.gene54957:CDS | 50.0% |
!! | GTTGCGAAGTTTGGTGTGGT+TGG | + | chr7.2:23602529-23602548 | MS.gene54957:CDS | 50.0% |
!! | TAAGGGCTTTTTCCGCGGAT+GGG | + | chr7.2:23601002-23601021 | MS.gene54957:CDS | 50.0% |
!! | TTAAGGGCTTTTTCCGCGGA+TGG | + | chr7.2:23601001-23601020 | MS.gene54957:CDS | 50.0% |
!!! | CTTGGTGTCAGTTTTGCTGG+TGG | + | chr7.2:23602310-23602329 | MS.gene54957:CDS | 50.0% |
AACACTTACCGGAGCCCAGT+GGG | + | chr7.2:23602594-23602613 | MS.gene54957:CDS | 55.0% | |
AATACGGAGAGGGAGACCTC+TGG | - | chr7.2:23602563-23602582 | None:intergenic | 55.0% | |
CAGCAGATGCTGAACCAGCA+AGG | - | chr7.2:23601152-23601171 | None:intergenic | 55.0% | |
CGTTGCACTTTGCCCATTCG+AGG | + | chr7.2:23601185-23601204 | MS.gene54957:CDS | 55.0% | |
GATCCAGTTCCACGGAGTGA+AGG | - | chr7.2:23599716-23599735 | None:intergenic | 55.0% | |
GCAATCTCTGCAATGGGAGC+AGG | - | chr7.2:23602762-23602781 | None:intergenic | 55.0% | |
GGAATCTGCCTTCCCCATAG+AGG | - | chr7.2:23601438-23601457 | None:intergenic | 55.0% | |
GTAATGTAGGGACCCATCCG+CGG | - | chr7.2:23601017-23601036 | None:intergenic | 55.0% | |
GTCAATGACCGTGTCGTGAC+CGG | - | chr7.2:23600403-23600422 | None:intergenic | 55.0% | |
GTCCGTGTTCAAACTCAGCC+CGG | + | chr7.2:23601216-23601235 | MS.gene54957:CDS | 55.0% | |
TCACTCCGTGGAACTGGATC+CGG | + | chr7.2:23599716-23599735 | MS.gene54957:CDS | 55.0% | |
TGCAGCAAAGGGCTGCAACT+TGG | + | chr7.2:23602292-23602311 | MS.gene54957:CDS | 55.0% | |
! | ACTCAGCCCGGTTTTGCAAG+AGG | + | chr7.2:23601228-23601247 | MS.gene54957:CDS | 55.0% |
! | CCCGGTTTTGCAAGAGGTCT+TGG | + | chr7.2:23601234-23601253 | MS.gene54957:CDS | 55.0% |
! | GGCTGTTGCGAAGTTTGGTG+TGG | + | chr7.2:23602525-23602544 | MS.gene54957:intron | 55.0% |
!! | GTGGTTGGTCTCTTCACCAG+AGG | + | chr7.2:23602544-23602563 | MS.gene54957:CDS | 55.0% |
!! | TGCTGGTTCAGCATCTGCTG+AGG | + | chr7.2:23601152-23601171 | MS.gene54957:CDS | 55.0% |
AATGACCGTGTCGTGACCGG+TGG | - | chr7.2:23600400-23600419 | None:intergenic | 60.0% | |
ACACTTACCGGAGCCCAGTG+GGG | + | chr7.2:23602595-23602614 | MS.gene54957:CDS | 60.0% | |
CCAGTTCCACGGAGTGAAGG+CGG | - | chr7.2:23599713-23599732 | None:intergenic | 60.0% | |
GAACACTTACCGGAGCCCAG+TGG | + | chr7.2:23602593-23602612 | MS.gene54957:CDS | 60.0% | |
CACAGCCACCGGTCACGACA+CGG | + | chr7.2:23600392-23600411 | MS.gene54957:intron | 65.0% | |
CCGCCTTCACTCCGTGGAAC+TGG | + | chr7.2:23599710-23599729 | MS.gene54957:CDS | 65.0% | |
CGGGACCGGAACTGACGATC+TGG | - | chr7.2:23599673-23599692 | None:intergenic | 65.0% | |
! | GGAGCAGCACCACCGGTTGT+TGG | - | chr7.2:23602741-23602760 | None:intergenic | 65.0% |
GGGAGCAGGAGCAGCACCAC+CGG | - | chr7.2:23602748-23602767 | None:intergenic | 70.0% | |
TCCACGGAGTGAAGGCGGCG+CGG | - | chr7.2:23599708-23599727 | None:intergenic | 70.0% | |
ACGGAGTGAAGGCGGCGCGG+CGG | - | chr7.2:23599705-23599724 | None:intergenic | 75.0% | |
! | GAGTGAAGGCGGCGCGGCGG+CGG | - | chr7.2:23599702-23599721 | None:intergenic | 80.0% |
! | GCCGCGCCGCCTTCACTCCG+TGG | + | chr7.2:23599704-23599723 | MS.gene54957:CDS | 80.0% |
! | GGCGGCGGAAGGAGCGGGAC+CGG | - | chr7.2:23599687-23599706 | None:intergenic | 80.0% |
! | CGGCGCGGCGGCGGAAGGAG+CGG | - | chr7.2:23599693-23599712 | None:intergenic | 85.0% |
! | GAAGGCGGCGCGGCGGCGGA+AGG | - | chr7.2:23599698-23599717 | None:intergenic | 85.0% |
! | GGCGCGGCGGCGGAAGGAGC+GGG | - | chr7.2:23599692-23599711 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 23599581 | 23602791 | 23599581 | ID=MS.gene54957 |
chr7.2 | mRNA | 23599581 | 23602791 | 23599581 | ID=MS.gene54957.t1;Parent=MS.gene54957 |
chr7.2 | exon | 23599581 | 23599892 | 23599581 | ID=MS.gene54957.t1.exon1;Parent=MS.gene54957.t1 |
chr7.2 | CDS | 23599581 | 23599892 | 23599581 | ID=cds.MS.gene54957.t1;Parent=MS.gene54957.t1 |
chr7.2 | exon | 23600937 | 23601298 | 23600937 | ID=MS.gene54957.t1.exon2;Parent=MS.gene54957.t1 |
chr7.2 | CDS | 23600937 | 23601298 | 23600937 | ID=cds.MS.gene54957.t1;Parent=MS.gene54957.t1 |
chr7.2 | exon | 23601416 | 23601459 | 23601416 | ID=MS.gene54957.t1.exon3;Parent=MS.gene54957.t1 |
chr7.2 | CDS | 23601416 | 23601459 | 23601416 | ID=cds.MS.gene54957.t1;Parent=MS.gene54957.t1 |
chr7.2 | exon | 23602212 | 23602426 | 23602212 | ID=MS.gene54957.t1.exon4;Parent=MS.gene54957.t1 |
chr7.2 | CDS | 23602212 | 23602426 | 23602212 | ID=cds.MS.gene54957.t1;Parent=MS.gene54957.t1 |
chr7.2 | exon | 23602526 | 23602650 | 23602526 | ID=MS.gene54957.t1.exon5;Parent=MS.gene54957.t1 |
chr7.2 | CDS | 23602526 | 23602650 | 23602526 | ID=cds.MS.gene54957.t1;Parent=MS.gene54957.t1 |
chr7.2 | exon | 23602737 | 23602791 | 23602737 | ID=MS.gene54957.t1.exon6;Parent=MS.gene54957.t1 |
chr7.2 | CDS | 23602737 | 23602791 | 23602737 | ID=cds.MS.gene54957.t1;Parent=MS.gene54957.t1 |
Gene Sequence |
Protein sequence |