Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55125.t1 | XP_024632321.1 | 96.1 | 380 | 13 | 1 | 2 | 379 | 3 | 382 | 7.70E-207 | 729.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55125.t1 | Q9SW00 | 55.0 | 380 | 165 | 4 | 3 | 379 | 4 | 380 | 1.8e-116 | 420.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55125.t1 | G7INK5 | 96.0 | 378 | 13 | 1 | 4 | 379 | 2 | 379 | 8.0e-206 | 725.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene032779 | MS.gene55125 | PPI |
MS.gene066288 | MS.gene55125 | PPI |
MS.gene99026 | MS.gene55125 | PPI |
MS.gene55125 | MS.gene49595 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55125.t1 | MTR_2g037770 | 96.032 | 378 | 13 | 1 | 4 | 379 | 2 | 379 | 0.0 | 740 |
MS.gene55125.t1 | MTR_2g037770 | 96.333 | 300 | 9 | 1 | 2 | 299 | 1 | 300 | 0.0 | 597 |
MS.gene55125.t1 | MTR_2g037770 | 96.321 | 299 | 9 | 1 | 3 | 299 | 1 | 299 | 0.0 | 593 |
MS.gene55125.t1 | MTR_2g037790 | 72.849 | 372 | 100 | 1 | 9 | 379 | 13 | 384 | 0.0 | 566 |
MS.gene55125.t1 | MTR_2g037790 | 72.849 | 372 | 100 | 1 | 9 | 379 | 10 | 381 | 0.0 | 565 |
MS.gene55125.t1 | MTR_4g127510 | 68.602 | 379 | 115 | 3 | 5 | 379 | 1 | 379 | 0.0 | 527 |
MS.gene55125.t1 | MTR_2g037770 | 94.776 | 268 | 12 | 1 | 3 | 268 | 1 | 268 | 0.0 | 525 |
MS.gene55125.t1 | MTR_4g127490 | 67.989 | 378 | 114 | 4 | 9 | 379 | 16 | 393 | 0.0 | 513 |
MS.gene55125.t1 | MTR_4g127490 | 67.989 | 378 | 114 | 4 | 9 | 379 | 14 | 391 | 0.0 | 513 |
MS.gene55125.t1 | MTR_7g061830 | 26.190 | 336 | 216 | 11 | 46 | 359 | 83 | 408 | 6.93e-16 | 79.3 |
MS.gene55125.t1 | MTR_4g101410 | 26.706 | 337 | 208 | 14 | 46 | 355 | 170 | 494 | 9.30e-12 | 66.6 |
MS.gene55125.t1 | MTR_3g097270 | 24.859 | 354 | 207 | 15 | 46 | 364 | 389 | 718 | 9.76e-12 | 67.0 |
MS.gene55125.t1 | MTR_4g101410 | 26.923 | 338 | 206 | 15 | 46 | 355 | 401 | 725 | 1.55e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene55125.t1 | AT5G57240 | 53.743 | 374 | 167 | 4 | 9 | 379 | 5 | 375 | 3.08e-149 | 427 |
MS.gene55125.t1 | AT5G57240 | 53.743 | 374 | 167 | 4 | 9 | 379 | 5 | 375 | 3.08e-149 | 427 |
MS.gene55125.t1 | AT5G57240 | 53.743 | 374 | 167 | 4 | 9 | 379 | 5 | 375 | 3.08e-149 | 427 |
MS.gene55125.t1 | AT4G25850 | 55.000 | 380 | 165 | 4 | 3 | 379 | 4 | 380 | 1.90e-148 | 425 |
MS.gene55125.t1 | AT4G25850 | 55.000 | 380 | 165 | 4 | 3 | 379 | 106 | 482 | 1.18e-146 | 424 |
MS.gene55125.t1 | AT5G57240 | 50.376 | 399 | 167 | 5 | 9 | 379 | 5 | 400 | 3.81e-143 | 412 |
MS.gene55125.t1 | AT5G57240 | 50.376 | 399 | 167 | 5 | 9 | 379 | 5 | 400 | 3.81e-143 | 412 |
MS.gene55125.t1 | AT4G25860 | 52.632 | 380 | 174 | 4 | 3 | 379 | 5 | 381 | 1.36e-141 | 408 |
MS.gene55125.t1 | AT4G25860 | 53.476 | 374 | 168 | 4 | 9 | 379 | 5 | 375 | 2.93e-141 | 407 |
MS.gene55125.t1 | AT4G25850 | 56.981 | 265 | 109 | 3 | 3 | 264 | 4 | 266 | 5.81e-104 | 308 |
MS.gene55125.t1 | AT5G02100 | 27.576 | 330 | 211 | 11 | 46 | 355 | 51 | 372 | 4.31e-18 | 85.9 |
MS.gene55125.t1 | AT5G02100 | 27.576 | 330 | 211 | 11 | 46 | 355 | 78 | 399 | 6.12e-18 | 85.5 |
MS.gene55125.t1 | AT5G59420 | 27.327 | 333 | 214 | 11 | 46 | 358 | 78 | 402 | 2.20e-17 | 84.0 |
MS.gene55125.t1 | AT3G09300 | 27.219 | 338 | 210 | 12 | 46 | 359 | 83 | 408 | 7.17e-17 | 82.4 |
MS.gene55125.t1 | AT2G31020 | 26.171 | 363 | 213 | 17 | 46 | 369 | 421 | 767 | 1.69e-11 | 66.2 |
MS.gene55125.t1 | AT2G31030 | 25.620 | 363 | 215 | 17 | 46 | 369 | 136 | 482 | 1.91e-11 | 65.9 |
Find 87 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAATCATTTCTTAACGAAAA+TGG | 0.219405 | 2.1:-52720341 | None:intergenic |
ATAAGAATTCTTCCTGTTAC+TGG | 0.231549 | 2.1:+52723369 | MS.gene55125:CDS |
AATATACGTTGCAATAAATT+AGG | 0.240996 | 2.1:-52720389 | None:intergenic |
CAACTGAATCGGCTCTTATT+TGG | 0.268015 | 2.1:+52724394 | MS.gene55125:CDS |
TACATAAGTCAATCATTCTT+TGG | 0.268802 | 2.1:+52723456 | MS.gene55125:CDS |
AGTCAATCATTCTTTGGATT+TGG | 0.271109 | 2.1:+52723462 | MS.gene55125:CDS |
TGAGACAATGTGAAATGTTT+AGG | 0.274415 | 2.1:-52724540 | None:intergenic |
GCTCCTTATAATCCAATTCT+TGG | 0.280213 | 2.1:+52722154 | MS.gene55125:CDS |
AGAATTCTTATAAAGAGATT+TGG | 0.285918 | 2.1:-52723357 | None:intergenic |
TCACCAAGAATTGGATTATA+AGG | 0.307580 | 2.1:-52722157 | None:intergenic |
TATTGATTCACTCACATCTA+AGG | 0.332350 | 2.1:+52723515 | MS.gene55125:CDS |
TCCTGTTACTGGAGTTGATT+GGG | 0.344104 | 2.1:+52723380 | MS.gene55125:CDS |
TGGTAATAGAAGATTAATAA+AGG | 0.358423 | 2.1:+52723485 | MS.gene55125:CDS |
TTCCTGTTACTGGAGTTGAT+TGG | 0.361020 | 2.1:+52723379 | MS.gene55125:CDS |
TTCCCAGTCTTTGCTCAAGA+TGG | 0.372216 | 2.1:-52724433 | None:intergenic |
GACTTTGGAAAGTTGAATAA+TGG | 0.375860 | 2.1:-52721986 | None:intergenic |
CTCAAAGCAAAGAAGGGTCT+TGG | 0.381086 | 2.1:+52724559 | MS.gene55125:CDS |
TGATGAGTCTCACCAAGAAT+TGG | 0.396025 | 2.1:-52722166 | None:intergenic |
ACCCAATCAACTCCAGTAAC+AGG | 0.403466 | 2.1:-52723381 | None:intergenic |
TTACTGGAGTTGATTGGGTT+GGG | 0.408955 | 2.1:+52723385 | MS.gene55125:CDS |
AGTCTTTGCTCAAGATGGCT+TGG | 0.411471 | 2.1:-52724428 | None:intergenic |
AGGAACCCAAGTTTCTCCTT+TGG | 0.413382 | 2.1:-52724520 | None:intergenic |
GGTAATAGAAGATTAATAAA+GGG | 0.417175 | 2.1:+52723486 | MS.gene55125:CDS |
CAATCATTCTTTGGATTTGG+TGG | 0.424280 | 2.1:+52723465 | MS.gene55125:CDS |
AACATCAGGTGTATAGAAAC+AGG | 0.435930 | 2.1:+52723414 | MS.gene55125:CDS |
TCTTAATGTCCTACTAGAAC+AGG | 0.449092 | 2.1:+52722204 | MS.gene55125:CDS |
CAGTTAATGGTCACTGGGAT+AGG | 0.453037 | 2.1:+52723547 | MS.gene55125:CDS |
ATGCTAAAGAAGTCATTTCA+AGG | 0.455627 | 2.1:+52723749 | MS.gene55125:CDS |
TTGTTTACCTATTCAAAAGT+TGG | 0.461662 | 2.1:+52724584 | MS.gene55125:CDS |
CGTTACCTCTGCATCCTTGA+CGG | 0.462071 | 2.1:-52723785 | None:intergenic |
TAGCACTGAAGTTGTGACTT+TGG | 0.464309 | 2.1:-52722001 | None:intergenic |
TAGGACATTAAGATTTCCCT+TGG | 0.465061 | 2.1:-52722194 | None:intergenic |
CCGTCTCGTCAGTTGCATGA+AGG | 0.469096 | 2.1:-52722885 | None:intergenic |
GAGCGTGTGGCCAACTGAAT+CGG | 0.470504 | 2.1:+52724383 | MS.gene55125:intron |
GAGAGTCCAAAGGAGAAACT+TGG | 0.475652 | 2.1:+52724514 | MS.gene55125:CDS |
TCAAAGCAAAGAAGGGTCTT+GGG | 0.475933 | 2.1:+52724560 | MS.gene55125:CDS |
CGGAAAACATAGAAATCATA+TGG | 0.479297 | 2.1:+52722905 | MS.gene55125:CDS |
CATCCTTGACGGTAGGAGCT+TGG | 0.481438 | 2.1:-52723774 | None:intergenic |
ATACAAGTAATGGTGAAGAA+AGG | 0.481881 | 2.1:+52723716 | MS.gene55125:CDS |
CGTCTCGTCAGTTGCATGAA+GGG | 0.484476 | 2.1:-52722884 | None:intergenic |
TATCCTGCTGCAAAGTTCAA+TGG | 0.486814 | 2.1:+52722934 | MS.gene55125:CDS |
AAGCTCAGGTGCACGGAAAA+CGG | 0.491909 | 2.1:+52723289 | MS.gene55125:CDS |
CATATGTCTCTCCATGATTG+AGG | 0.492960 | 2.1:-52723323 | None:intergenic |
AAGCCATCTTGAGCAAAGAC+TGG | 0.494838 | 2.1:+52724430 | MS.gene55125:CDS |
AAACTGAGGCTCCTCAATCA+TGG | 0.503738 | 2.1:+52723312 | MS.gene55125:CDS |
GTTACTGGAGTTGATTGGGT+TGG | 0.503780 | 2.1:+52723384 | MS.gene55125:CDS |
TACAAGTAATGGTGAAGAAA+GGG | 0.504165 | 2.1:+52723717 | MS.gene55125:CDS |
AGGTACTTCAGTGGAAGCTC+AGG | 0.510651 | 2.1:+52723275 | MS.gene55125:intron |
ACATTGTCTCAAAGCAAAGA+AGG | 0.512371 | 2.1:+52724552 | MS.gene55125:CDS |
GGGTTGGGAATGTCAACATC+AGG | 0.517804 | 2.1:+52723400 | MS.gene55125:CDS |
GCATGAAGGGCAGATACAGC+AGG | 0.518949 | 2.1:-52722871 | None:intergenic |
TTACCATTGAACTTTGCAGC+AGG | 0.521587 | 2.1:-52722937 | None:intergenic |
CTTCTTAAGAATGTGCGGCC+AGG | 0.525043 | 2.1:+52720416 | MS.gene55125:CDS |
AAACATGTACCTGTTCTAGT+AGG | 0.534118 | 2.1:-52722213 | None:intergenic |
GACTCATATCTGTTGTAGCA+TGG | 0.556631 | 2.1:+52722095 | MS.gene55125:CDS |
TTGACTTATGTAACTTAACT+CGG | 0.556810 | 2.1:-52723445 | None:intergenic |
AAGAAATGATTCAGATTCAG+AGG | 0.558103 | 2.1:+52720352 | MS.gene55125:CDS |
AAGTCACAACTTCAGTGCTA+TGG | 0.558780 | 2.1:+52722004 | MS.gene55125:CDS |
TGAGACTCATCATGTTTCCA+AGG | 0.561100 | 2.1:+52722177 | MS.gene55125:CDS |
TTACTAAGCAAGTGTAACAC+TGG | 0.562854 | 2.1:+52722055 | MS.gene55125:CDS |
CAAATAAGAGCCGATTCAGT+TGG | 0.568756 | 2.1:-52724393 | None:intergenic |
AAGGTTACAATAGGAGAGTG+TGG | 0.570542 | 2.1:-52724609 | None:intergenic |
GTAATAGAAGATTAATAAAG+GGG | 0.575521 | 2.1:+52723487 | MS.gene55125:CDS |
CCTTCATGCAACTGACGAGA+CGG | 0.581666 | 2.1:+52722885 | MS.gene55125:CDS |
GCTTAGTAAGTCTGAAGATG+TGG | 0.584145 | 2.1:-52722041 | None:intergenic |
GTTTGCTTCATCAGAGCGTG+TGG | 0.585015 | 2.1:+52724370 | MS.gene55125:intron |
AGCCATCTTGAGCAAAGACT+GGG | 0.590587 | 2.1:+52724431 | MS.gene55125:CDS |
TCAAGAGAAAGAGAGTCCAA+AGG | 0.595048 | 2.1:+52724504 | MS.gene55125:CDS |
AGAGTCCAAAGGAGAAACTT+GGG | 0.596821 | 2.1:+52724515 | MS.gene55125:CDS |
AAACGTGTGAGATCAGATCC+TGG | 0.604506 | 2.1:-52720434 | None:intergenic |
ACCTCTGCATCCTTGACGGT+AGG | 0.609097 | 2.1:-52723781 | None:intergenic |
TCCTACCGTCAAGGATGCAG+AGG | 0.611955 | 2.1:+52723780 | MS.gene55125:CDS |
CATTGTCTCAAAGCAAAGAA+GGG | 0.612396 | 2.1:+52724553 | MS.gene55125:CDS |
TCAGTGGAAGCTCAGGTGCA+CGG | 0.614792 | 2.1:+52723282 | MS.gene55125:CDS |
TACTAAGCAAGTGTAACACT+GGG | 0.618051 | 2.1:+52722056 | MS.gene55125:CDS |
TTTGGAAAGTTGAATAATGG+TGG | 0.620708 | 2.1:-52721983 | None:intergenic |
AGGTTACAATAGGAGAGTGT+GGG | 0.621422 | 2.1:-52724608 | None:intergenic |
TAAGTCTTCTTAAGAATGTG+CGG | 0.626069 | 2.1:+52720411 | MS.gene55125:CDS |
ACACTGAAGGATACAAGTAA+TGG | 0.634095 | 2.1:+52723706 | MS.gene55125:CDS |
GCTCCAAGCTCCTACCGTCA+AGG | 0.634394 | 2.1:+52723771 | MS.gene55125:CDS |
GTGTATAGAAACAGGTCTTG+TGG | 0.641940 | 2.1:+52723422 | MS.gene55125:CDS |
GAGACTCATCATGTTTCCAA+GGG | 0.644355 | 2.1:+52722178 | MS.gene55125:CDS |
TGCACGGAAAACGGAAACTG+AGG | 0.670770 | 2.1:+52723298 | MS.gene55125:CDS |
CATGAAGGGCAGATACAGCA+GGG | 0.681197 | 2.1:-52722870 | None:intergenic |
AAGAGAAGCAAAGAAAACTG+TGG | 0.683712 | 2.1:+52724461 | MS.gene55125:CDS |
ATGCAGTACTGTAACACTGA+AGG | 0.694791 | 2.1:+52723693 | MS.gene55125:intron |
GAAGGGCAGATACAGCAGGG+TGG | 0.789321 | 2.1:-52722867 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTTTTTA+GGG | - | chr2.1:52718556-52718575 | None:intergenic | 0.0% |
!!! | TTTTTTTTTTTTTTTTTTTT+AGG | - | chr2.1:52718557-52718576 | None:intergenic | 0.0% |
!! | ATACATGTATAAAATAATAA+TGG | - | chr2.1:52718398-52718417 | None:intergenic | 10.0% |
!! | TGAAAAAAAAAATTATTTGA+CGG | + | chr2.1:52719530-52719549 | MS.gene55125:intron | 10.0% |
!!! | ACTATTTTATAAATTATCTT+AGG | + | chr2.1:52724679-52724698 | MS.gene55125:intron | 10.0% |
!!! | TCATTTTTATTTCATTTTAT+TGG | + | chr2.1:52721398-52721417 | MS.gene55125:intron | 10.0% |
!!! | TGATTTTCTAAAATTATTAT+CGG | - | chr2.1:52721779-52721798 | None:intergenic | 10.0% |
!! | AAAATTCATTAAAATCCTTA+AGG | + | chr2.1:52720041-52720060 | MS.gene55125:intron | 15.0% |
!! | AAACTATATGACAAATTATA+AGG | - | chr2.1:52724631-52724650 | None:intergenic | 15.0% |
!! | AAAGAAAAAGAAAATAACAA+TGG | - | chr2.1:52719740-52719759 | None:intergenic | 15.0% |
!! | AATCGAAGTATAAATATTTA+CGG | + | chr2.1:52723907-52723926 | MS.gene55125:intron | 15.0% |
!! | ACGTAATTTCTTAATAAAAA+CGG | - | chr2.1:52719319-52719338 | None:intergenic | 15.0% |
!! | ATAAAATAAACCAAATATGT+AGG | + | chr2.1:52723131-52723150 | MS.gene55125:intron | 15.0% |
!! | ATTATCATATGAAGAAAATA+TGG | + | chr2.1:52720680-52720699 | MS.gene55125:intron | 15.0% |
!! | CATCACATTATAAATTAATT+AGG | - | chr2.1:52723676-52723695 | None:intergenic | 15.0% |
!! | GAAAAAAAAAATTATTTGAC+GGG | + | chr2.1:52719531-52719550 | MS.gene55125:intron | 15.0% |
!! | TTCAAAAATAGGAAAATAAA+TGG | + | chr2.1:52719859-52719878 | MS.gene55125:intron | 15.0% |
!!! | AAAAAATTTAATTGCACTTT+TGG | - | chr2.1:52721005-52721024 | None:intergenic | 15.0% |
!!! | AACACAATGTTATTTTTTTA+TGG | - | chr2.1:52721942-52721961 | None:intergenic | 15.0% |
!!! | AATTTCATACAATATTTTAC+TGG | - | chr2.1:52720214-52720233 | None:intergenic | 15.0% |
!!! | ATAAGATATTTTTTTGTTGT+TGG | - | chr2.1:52721150-52721169 | None:intergenic | 15.0% |
!!! | CAATTAAATTTTTTGTTTGA+AGG | + | chr2.1:52721011-52721030 | MS.gene55125:intron | 15.0% |
!!! | TCTATTTCAAATTAGTTTTT+AGG | + | chr2.1:52718949-52718968 | MS.gene55125:intron | 15.0% |
!!! | TGATTTTTTGTTGTATAAAT+TGG | - | chr2.1:52721347-52721366 | None:intergenic | 15.0% |
!!! | TTAAACTTAATCTCTAAAAT+TGG | + | chr2.1:52719213-52719232 | MS.gene55125:intron | 15.0% |
!!! | TTATTTTCTTTTTCTTTTGT+AGG | + | chr2.1:52719743-52719762 | MS.gene55125:intron | 15.0% |
!!! | TTTTTATTTCATTTTATTGG+TGG | + | chr2.1:52721401-52721420 | MS.gene55125:intron | 15.0% |
!!! | TTTTTTATTTTTTGGTCAAT+GGG | + | chr2.1:52720922-52720941 | MS.gene55125:intron | 15.0% |
!! | AAAAAATAACATTGTGTTGT+TGG | + | chr2.1:52721944-52721963 | MS.gene55125:intron | 20.0% |
!! | AAAGTAATCAAGAAATTATG+AGG | + | chr2.1:52720628-52720647 | MS.gene55125:intron | 20.0% |
!! | AATATACGTTGCAATAAATT+AGG | - | chr2.1:52720392-52720411 | None:intergenic | 20.0% |
!! | AATTCCTTCAACTAATTTAA+TGG | - | chr2.1:52718642-52718661 | None:intergenic | 20.0% |
!! | ACAAATTATAAGGTTACAAT+AGG | - | chr2.1:52724621-52724640 | None:intergenic | 20.0% |
!! | AGAATTCTTATAAAGAGATT+TGG | - | chr2.1:52723360-52723379 | None:intergenic | 20.0% |
!! | ATAAGATTATAGAAACCTAT+AGG | + | chr2.1:52722374-52722393 | MS.gene55125:intron | 20.0% |
!! | ATACTTTCTTCTTTCTTATT+TGG | + | chr2.1:52720483-52720502 | MS.gene55125:intron | 20.0% |
!! | ATATAACACAATTACAATGT+GGG | - | chr2.1:52719831-52719850 | None:intergenic | 20.0% |
!! | ATATTATAGAAATGCTGAAA+TGG | - | chr2.1:52724655-52724674 | None:intergenic | 20.0% |
!! | ATGTTAAATTATAGACCAAT+CGG | + | chr2.1:52722555-52722574 | MS.gene55125:intron | 20.0% |
!! | GGTAATAGAAGATTAATAAA+GGG | + | chr2.1:52723486-52723505 | MS.gene55125:CDS | 20.0% |
!! | GTAAATATTTATACTTCGAT+TGG | - | chr2.1:52723908-52723927 | None:intergenic | 20.0% |
!! | GTAATAGAAGATTAATAAAG+GGG | + | chr2.1:52723487-52723506 | MS.gene55125:CDS | 20.0% |
!! | TAAATTGGATATTACAACTT+TGG | - | chr2.1:52721332-52721351 | None:intergenic | 20.0% |
!! | TAAATTTGTATGCAAATCTA+TGG | + | chr2.1:52723012-52723031 | MS.gene55125:intron | 20.0% |
!! | TAATTAGGAAGATAGTATAT+AGG | - | chr2.1:52723661-52723680 | None:intergenic | 20.0% |
!! | TAATTTAAGAAGTGGTAAAA+TGG | + | chr2.1:52719149-52719168 | MS.gene55125:intron | 20.0% |
!! | TACTAAAACATTGGATTAAA+CGG | - | chr2.1:52719178-52719197 | None:intergenic | 20.0% |
!! | TATCTAACAATGTTTGAATT+AGG | + | chr2.1:52721249-52721268 | MS.gene55125:intron | 20.0% |
!! | TATTAAACACACTAATAAAG+CGG | + | chr2.1:52719243-52719262 | MS.gene55125:intron | 20.0% |
!! | TGGTAATAGAAGATTAATAA+AGG | + | chr2.1:52723485-52723504 | MS.gene55125:CDS | 20.0% |
!! | TGTTAAGAATAACAAATTGA+TGG | - | chr2.1:52723623-52723642 | None:intergenic | 20.0% |
!! | TTAAATTAGTTGAAGGAATT+TGG | + | chr2.1:52718642-52718661 | MS.gene55125:intron | 20.0% |
!! | TTAAGATATATGTGAGTTAT+CGG | - | chr2.1:52719911-52719930 | None:intergenic | 20.0% |
!! | TTTAAAAAAACTGCATGAAA+GGG | - | chr2.1:52721468-52721487 | None:intergenic | 20.0% |
!!! | AAATAAAAACTTTGGCTTTA+CGG | - | chr2.1:52721110-52721129 | None:intergenic | 20.0% |
!!! | AATTTCTTTTGTTTTCCTAT+AGG | - | chr2.1:52722392-52722411 | None:intergenic | 20.0% |
!!! | AGAGATTTTGTCAAAAATAA+CGG | - | chr2.1:52720658-52720677 | None:intergenic | 20.0% |
!!! | AGCTTTTTAGTTTATTTTTC+CGG | - | chr2.1:52718315-52718334 | None:intergenic | 20.0% |
!!! | ATTCATTTAAAGCAAATTCA+TGG | - | chr2.1:52719285-52719304 | None:intergenic | 20.0% |
!!! | ATTTTTTGGTCAAAAAACTA+GGG | + | chr2.1:52720947-52720966 | MS.gene55125:intron | 20.0% |
!!! | CAATGAATAATTTGTTAAGT+TGG | + | chr2.1:52722736-52722755 | MS.gene55125:intron | 20.0% |
!!! | CAATTTTAAATTTGAATCGT+CGG | + | chr2.1:52719790-52719809 | MS.gene55125:intron | 20.0% |
!!! | CTTTTTTTCTTTGAATTTAG+AGG | + | chr2.1:52720564-52720583 | MS.gene55125:intron | 20.0% |
!!! | GAAGAGTGTTTTTTATTTTT+TGG | + | chr2.1:52720914-52720933 | MS.gene55125:intron | 20.0% |
!!! | GTTTTTATTAAGAAATTACG+TGG | + | chr2.1:52719318-52719337 | MS.gene55125:intron | 20.0% |
!!! | GTTTTTTATTTTTTGGTCAA+TGG | + | chr2.1:52720921-52720940 | MS.gene55125:intron | 20.0% |
!!! | TAAATTTTACGATGTGTTTA+TGG | + | chr2.1:52722782-52722801 | MS.gene55125:intron | 20.0% |
!!! | TATGGATTGATTTCAAAAAT+AGG | + | chr2.1:52719848-52719867 | MS.gene55125:intron | 20.0% |
!!! | TATTTTTTGGTCAAAAAACT+AGG | + | chr2.1:52720946-52720965 | MS.gene55125:intron | 20.0% |
!!! | TGTGAATATGATAATGTATT+TGG | - | chr2.1:52720244-52720263 | None:intergenic | 20.0% |
!!! | TGTGATAACTTTTTTTTTAC+TGG | + | chr2.1:52718841-52718860 | MS.gene55125:intron | 20.0% |
!!! | TTAGTTTTAAAAAGAATGAG+TGG | - | chr2.1:52721214-52721233 | None:intergenic | 20.0% |
!!! | TTCTTCATTTCTTATGTTTT+AGG | + | chr2.1:52720514-52720533 | MS.gene55125:intron | 20.0% |
!!! | TTTTAGGATGAGTAAAAATA+GGG | + | chr2.1:52720530-52720549 | MS.gene55125:intron | 20.0% |
! | AACTCAATCTACTAAAACAT+TGG | - | chr2.1:52719187-52719206 | None:intergenic | 25.0% |
! | AAGATTCAATCATCAACATA+TGG | - | chr2.1:52720736-52720755 | None:intergenic | 25.0% |
! | AATCATCAACATATGGTTAA+AGG | - | chr2.1:52720729-52720748 | None:intergenic | 25.0% |
! | ACAGTTGTATTGAAAATGTA+CGG | + | chr2.1:52718770-52718789 | MS.gene55125:intron | 25.0% |
! | ACATCCATTAAATTAGTTGA+AGG | + | chr2.1:52718635-52718654 | MS.gene55125:intron | 25.0% |
! | AGTGAACAAAAAAAATGTAC+AGG | - | chr2.1:52721186-52721205 | None:intergenic | 25.0% |
! | ATACTTGTTCTAACTCAATT+AGG | - | chr2.1:52723050-52723069 | None:intergenic | 25.0% |
! | ATCATCAACATATGGTTAAA+GGG | - | chr2.1:52720728-52720747 | None:intergenic | 25.0% |
! | ATCGATACGAACAAAAATTA+AGG | - | chr2.1:52718350-52718369 | None:intergenic | 25.0% |
! | ATTATATATACCAAAGTTGC+CGG | + | chr2.1:52722409-52722428 | MS.gene55125:intron | 25.0% |
! | CAAAAGTAAAAGCTATAAAG+TGG | - | chr2.1:52720825-52720844 | None:intergenic | 25.0% |
! | CACATTGTAATTGTGTTATA+TGG | + | chr2.1:52719830-52719849 | MS.gene55125:intron | 25.0% |
! | CATATAACACAATTACAATG+TGG | - | chr2.1:52719832-52719851 | None:intergenic | 25.0% |
! | CGGGAAAATAAATAAATTAG+AGG | + | chr2.1:52724224-52724243 | MS.gene55125:intron | 25.0% |
! | CTGTGAAAACAAAATTAAGT+TGG | - | chr2.1:52721290-52721309 | None:intergenic | 25.0% |
! | CTTCTTAAATTATTAGTGAC+AGG | - | chr2.1:52719141-52719160 | None:intergenic | 25.0% |
! | GAAAATTTATGTTAACGTTG+AGG | + | chr2.1:52720797-52720816 | MS.gene55125:intron | 25.0% |
! | GAATCATTTCTTAACGAAAA+TGG | - | chr2.1:52720344-52720363 | None:intergenic | 25.0% |
! | GGTAATTTATAACCTTCATT+CGG | - | chr2.1:52720190-52720209 | None:intergenic | 25.0% |
! | GGTTTGACTATAAAAAAAAC+AGG | - | chr2.1:52722590-52722609 | None:intergenic | 25.0% |
! | GTCACTAATAATTTAAGAAG+TGG | + | chr2.1:52719141-52719160 | MS.gene55125:intron | 25.0% |
! | GTTTAAAAAAACTGCATGAA+AGG | - | chr2.1:52721469-52721488 | None:intergenic | 25.0% |
! | TACAACAATTCAATCATCTA+TGG | - | chr2.1:52722824-52722843 | None:intergenic | 25.0% |
! | TACATAAGTCAATCATTCTT+TGG | + | chr2.1:52723456-52723475 | MS.gene55125:CDS | 25.0% |
! | TAGAATTTCATTTGCTTCTT+TGG | - | chr2.1:52719116-52719135 | None:intergenic | 25.0% |
! | TATAAAAAAAACAGGTAAGC+AGG | - | chr2.1:52722582-52722601 | None:intergenic | 25.0% |
! | TATGATATTTAACCGAATGA+AGG | + | chr2.1:52720175-52720194 | MS.gene55125:intron | 25.0% |
! | TGTCTATCCAAAAAAAATGT+AGG | + | chr2.1:52723255-52723274 | MS.gene55125:intron | 25.0% |
! | TTAAAAAAACTGCATGAAAG+GGG | - | chr2.1:52721467-52721486 | None:intergenic | 25.0% |
! | TTGACTTATGTAACTTAACT+CGG | - | chr2.1:52723448-52723467 | None:intergenic | 25.0% |
! | TTGTTTACCTATTCAAAAGT+TGG | + | chr2.1:52724584-52724603 | MS.gene55125:CDS | 25.0% |
! | TTTGAATTTAGAGGAGAAAT+AGG | + | chr2.1:52720573-52720592 | MS.gene55125:intron | 25.0% |
! | TTTGCACTATATAGTTTAGT+AGG | + | chr2.1:52719082-52719101 | MS.gene55125:intron | 25.0% |
!! | AAGGTTCTTTTTACAGTTAA+TGG | + | chr2.1:52723534-52723553 | MS.gene55125:CDS | 25.0% |
!! | AATATAGTACTTTTGTGTAC+CGG | - | chr2.1:52724165-52724184 | None:intergenic | 25.0% |
!! | ATATGTTTAGTTTCGTGTTA+CGG | + | chr2.1:52720758-52720777 | MS.gene55125:intron | 25.0% |
!! | ATTTGATTTCTTACACCTTA+AGG | - | chr2.1:52720059-52720078 | None:intergenic | 25.0% |
!! | TCTAAAATTATTATCGGTGT+CGG | - | chr2.1:52721773-52721792 | None:intergenic | 25.0% |
!! | TTCATACAATATTTTACTGG+TGG | - | chr2.1:52720211-52720230 | None:intergenic | 25.0% |
!! | TTTAGGATGAGTAAAAATAG+GGG | + | chr2.1:52720531-52720550 | MS.gene55125:intron | 25.0% |
!!! | AATTTGTTATATGAAGATGC+AGG | + | chr2.1:52720289-52720308 | MS.gene55125:intron | 25.0% |
!!! | ACTAGTCCATATTTTAAGAT+GGG | - | chr2.1:52722611-52722630 | None:intergenic | 25.0% |
!!! | ACTTAATTTTGTTTTCACAG+TGG | + | chr2.1:52721290-52721309 | MS.gene55125:intron | 25.0% |
!!! | GATTGGTCTATAATTTAACA+TGG | - | chr2.1:52722556-52722575 | None:intergenic | 25.0% |
!!! | GTAAAACTTTTTTGCTCTAT+TGG | - | chr2.1:52721590-52721609 | None:intergenic | 25.0% |
!!! | GTATTTTTTAGAGAGCTTTT+CGG | + | chr2.1:52719379-52719398 | MS.gene55125:intron | 25.0% |
!!! | GTTTTAGGATGAGTAAAAAT+AGG | + | chr2.1:52720529-52720548 | MS.gene55125:intron | 25.0% |
!!! | TAAACTAAAAAGCTGTTTTC+CGG | + | chr2.1:52718321-52718340 | MS.gene55125:intron | 25.0% |
!!! | TGAAGTACCTACATTTTTTT+TGG | - | chr2.1:52723265-52723284 | None:intergenic | 25.0% |
AAAAAATGTAGGTACTTCAG+TGG | + | chr2.1:52723266-52723285 | MS.gene55125:intron | 30.0% | |
AAAATGTACAGGAAAAAGAG+TGG | - | chr2.1:52721175-52721194 | None:intergenic | 30.0% | |
AACAATGGATAAATTTCCCA+CGG | - | chr2.1:52719725-52719744 | None:intergenic | 30.0% | |
AACAGAGAGAAAAGATAAGA+CGG | - | chr2.1:52718220-52718239 | None:intergenic | 30.0% | |
AAGAAATGATTCAGATTCAG+AGG | + | chr2.1:52720352-52720371 | MS.gene55125:CDS | 30.0% | |
AATTTCCCACGGTTAAATAA+AGG | - | chr2.1:52719714-52719733 | None:intergenic | 30.0% | |
AGTACACACATGCATAAATA+TGG | + | chr2.1:52721495-52721514 | MS.gene55125:intron | 30.0% | |
AGTCAATCATTCTTTGGATT+TGG | + | chr2.1:52723462-52723481 | MS.gene55125:CDS | 30.0% | |
ATAAGAATTCTTCCTGTTAC+TGG | + | chr2.1:52723369-52723388 | MS.gene55125:CDS | 30.0% | |
ATAATGCTACATGCTTAGTT+TGG | + | chr2.1:52722242-52722261 | MS.gene55125:intron | 30.0% | |
ATACAAGTAATGGTGAAGAA+AGG | + | chr2.1:52723716-52723735 | MS.gene55125:CDS | 30.0% | |
ATGCTAAAGAAGTCATTTCA+AGG | + | chr2.1:52723749-52723768 | MS.gene55125:CDS | 30.0% | |
ATGTGAAGAAGCTAATAACA+AGG | - | chr2.1:52718283-52718302 | None:intergenic | 30.0% | |
ATTTCCCACGGTTAAATAAA+GGG | - | chr2.1:52719713-52719732 | None:intergenic | 30.0% | |
CATTGTCAGTATTACATTAG+AGG | - | chr2.1:52722666-52722685 | None:intergenic | 30.0% | |
CATTTCTTATCTCGAAATAG+TGG | + | chr2.1:52723595-52723614 | MS.gene55125:intron | 30.0% | |
CGGAAAACATAGAAATCATA+TGG | + | chr2.1:52722905-52722924 | MS.gene55125:CDS | 30.0% | |
GAAACATTGACATTAGAAGT+AGG | + | chr2.1:52724076-52724095 | MS.gene55125:intron | 30.0% | |
GAGATAGGACATATCAATTT+AGG | - | chr2.1:52719602-52719621 | None:intergenic | 30.0% | |
GCATCACATTACAATGTTAT+TGG | - | chr2.1:52721621-52721640 | None:intergenic | 30.0% | |
GTCAAACCCATCTTAAAATA+TGG | + | chr2.1:52722602-52722621 | MS.gene55125:intron | 30.0% | |
TAAATAAAGGGATGACAATG+CGG | - | chr2.1:52719701-52719720 | None:intergenic | 30.0% | |
TAAGTCTTCTTAAGAATGTG+CGG | + | chr2.1:52720411-52720430 | MS.gene55125:CDS | 30.0% | |
TACAAGTAATGGTGAAGAAA+GGG | + | chr2.1:52723717-52723736 | MS.gene55125:CDS | 30.0% | |
TCACCAAGAATTGGATTATA+AGG | - | chr2.1:52722160-52722179 | None:intergenic | 30.0% | |
TCGATTAGAAATGTTAGGAT+GGG | - | chr2.1:52722470-52722489 | None:intergenic | 30.0% | |
TGAGACAATGTGAAATGTTT+AGG | - | chr2.1:52724543-52724562 | None:intergenic | 30.0% | |
TGTTGTATTTGATTGTTTGC+AGG | + | chr2.1:52722837-52722856 | MS.gene55125:intron | 30.0% | |
TTGACGTTCAATTAAAGTTG+TGG | + | chr2.1:52723104-52723123 | MS.gene55125:intron | 30.0% | |
TTTGGAAAGTTGAATAATGG+TGG | - | chr2.1:52721986-52722005 | None:intergenic | 30.0% | |
! | ATTTTCGATGCTTTTCAATG+TGG | - | chr2.1:52719934-52719953 | None:intergenic | 30.0% |
! | GACTTTGGAAAGTTGAATAA+TGG | - | chr2.1:52721989-52722008 | None:intergenic | 30.0% |
! | TTTCATTTTATTGGTGGAGT+AGG | + | chr2.1:52721407-52721426 | MS.gene55125:intron | 30.0% |
! | TTTTACAGTTAATGGTCACT+GGG | + | chr2.1:52723542-52723561 | MS.gene55125:CDS | 30.0% |
! | TTTTTACAGTTAATGGTCAC+TGG | + | chr2.1:52723541-52723560 | MS.gene55125:CDS | 30.0% |
!! | AAAATATGGACTAGTCGAAT+CGG | + | chr2.1:52722616-52722635 | MS.gene55125:intron | 30.0% |
!! | ATTACATTAGAGGTGTCAAA+TGG | - | chr2.1:52722656-52722675 | None:intergenic | 30.0% |
!! | GACTAGTCCATATTTTAAGA+TGG | - | chr2.1:52722612-52722631 | None:intergenic | 30.0% |
!! | TATTGATTCACTCACATCTA+AGG | + | chr2.1:52723515-52723534 | MS.gene55125:CDS | 30.0% |
!! | TTTGTTAAGTTGGCGAAATA+TGG | + | chr2.1:52722746-52722765 | MS.gene55125:intron | 30.0% |
!!! | AAAAGTTTTAAGAAGGTCCA+GGG | + | chr2.1:52723203-52723222 | MS.gene55125:intron | 30.0% |
!!! | CAATTTTTTCCACAGTTTGA+AGG | - | chr2.1:52723994-52724013 | None:intergenic | 30.0% |
!!! | TGTTTTAGTAGATTGAGTTG+AGG | + | chr2.1:52719188-52719207 | MS.gene55125:intron | 30.0% |
!!! | TTGGTCAATGGGATATTTTT+TGG | + | chr2.1:52720933-52720952 | MS.gene55125:intron | 30.0% |
AAACATGTACCTGTTCTAGT+AGG | - | chr2.1:52722216-52722235 | None:intergenic | 35.0% | |
AAACTGTGGAGCAAAAACAA+AGG | + | chr2.1:52724475-52724494 | MS.gene55125:CDS | 35.0% | |
AAATAAAGGGATGACAATGC+GGG | - | chr2.1:52719700-52719719 | None:intergenic | 35.0% | |
AACATCAGGTGTATAGAAAC+AGG | + | chr2.1:52723414-52723433 | MS.gene55125:CDS | 35.0% | |
AACTGTGGAGCAAAAACAAA+GGG | + | chr2.1:52724476-52724495 | MS.gene55125:CDS | 35.0% | |
AAGAGAAGCAAAGAAAACTG+TGG | + | chr2.1:52724461-52724480 | MS.gene55125:CDS | 35.0% | |
AATCAAGTAAAGCAGTACAG+AGG | + | chr2.1:52724192-52724211 | MS.gene55125:intron | 35.0% | |
ACACTGAAGGATACAAGTAA+TGG | + | chr2.1:52723706-52723725 | MS.gene55125:CDS | 35.0% | |
ACATTGTCTCAAAGCAAAGA+AGG | + | chr2.1:52724552-52724571 | MS.gene55125:CDS | 35.0% | |
ACTGTGATTCAAACCTAAGT+TGG | - | chr2.1:52722315-52722334 | None:intergenic | 35.0% | |
ACTTAGGTTTGAATCACAGT+TGG | + | chr2.1:52722315-52722334 | MS.gene55125:intron | 35.0% | |
ATGCGCAATATGTGTGTATA+TGG | + | chr2.1:52723812-52723831 | MS.gene55125:intron | 35.0% | |
ATGTGCACGAAAAGAGAAAA+AGG | - | chr2.1:52718491-52718510 | None:intergenic | 35.0% | |
CAATCATTCTTTGGATTTGG+TGG | + | chr2.1:52723465-52723484 | MS.gene55125:CDS | 35.0% | |
CATAAGTCAATGCACATTGA+TGG | - | chr2.1:52720159-52720178 | None:intergenic | 35.0% | |
CATTGTCTCAAAGCAAAGAA+GGG | + | chr2.1:52724553-52724572 | MS.gene55125:CDS | 35.0% | |
CGAACAAAAATTAAGGTTGC+CGG | - | chr2.1:52718343-52718362 | None:intergenic | 35.0% | |
CTCGATTAGAAATGTTAGGA+TGG | - | chr2.1:52722471-52722490 | None:intergenic | 35.0% | |
CTTAGGTTTGAATCACAGTT+GGG | + | chr2.1:52722316-52722335 | MS.gene55125:intron | 35.0% | |
GACTGTAGTACCTACATATT+TGG | - | chr2.1:52723144-52723163 | None:intergenic | 35.0% | |
GATATCATGTAATTGTGCAG+TGG | + | chr2.1:52720853-52720872 | MS.gene55125:intron | 35.0% | |
GCTCCTTATAATCCAATTCT+TGG | + | chr2.1:52722154-52722173 | MS.gene55125:CDS | 35.0% | |
GTGACTCGATTAGAAATGTT+AGG | - | chr2.1:52722475-52722494 | None:intergenic | 35.0% | |
TAAGGAGCAACACCAAAAAT+TGG | - | chr2.1:52722142-52722161 | None:intergenic | 35.0% | |
TACTAAGCAAGTGTAACACT+GGG | + | chr2.1:52722056-52722075 | MS.gene55125:CDS | 35.0% | |
TAGGACATTAAGATTTCCCT+TGG | - | chr2.1:52722197-52722216 | None:intergenic | 35.0% | |
TCTTAATGTCCTACTAGAAC+AGG | + | chr2.1:52722204-52722223 | MS.gene55125:CDS | 35.0% | |
TGAAGAAAATATGGTCCAAG+TGG | + | chr2.1:52720689-52720708 | MS.gene55125:intron | 35.0% | |
TGCGCAATATGTGTGTATAT+GGG | + | chr2.1:52723813-52723832 | MS.gene55125:intron | 35.0% | |
TGTAAGCACAAAACCACAAA+TGG | - | chr2.1:52718618-52718637 | None:intergenic | 35.0% | |
TTACTAAGCAAGTGTAACAC+TGG | + | chr2.1:52722055-52722074 | MS.gene55125:CDS | 35.0% | |
TTAGAAATGTTAGGATGGGT+TGG | - | chr2.1:52722466-52722485 | None:intergenic | 35.0% | |
TTAGCGATTATGTTAAACCC+TGG | - | chr2.1:52723223-52723242 | None:intergenic | 35.0% | |
TTCTTCACATGAATTTCTGC+CGG | + | chr2.1:52718293-52718312 | MS.gene55125:intron | 35.0% | |
TTGATATGTCCTATCTCACA+TGG | + | chr2.1:52719605-52719624 | MS.gene55125:intron | 35.0% | |
TTGTCACATGTCATACTCTT+TGG | - | chr2.1:52719565-52719584 | None:intergenic | 35.0% | |
! | ACTTTTAACCCATCACAAAC+AGG | - | chr2.1:52719650-52719669 | None:intergenic | 35.0% |
! | CTTTTAACCCATCACAAACA+GGG | - | chr2.1:52719649-52719668 | None:intergenic | 35.0% |
! | GGACCTTCTTAAAACTTTTC+CGG | - | chr2.1:52723202-52723221 | None:intergenic | 35.0% |
! | GGTCTAAAGTAGCTAAATTG+AGG | + | chr2.1:52720968-52720987 | MS.gene55125:intron | 35.0% |
! | TAGAGTGAATGCTAGACTTT+TGG | - | chr2.1:52723954-52723973 | None:intergenic | 35.0% |
! | TCATCCCTTTATTTAACCGT+GGG | + | chr2.1:52719706-52719725 | MS.gene55125:intron | 35.0% |
! | TTCGTATCGATGTTTGATTG+TGG | + | chr2.1:52718359-52718378 | MS.gene55125:intron | 35.0% |
!! | AAAGCATCGAAAATTAACCC+TGG | + | chr2.1:52719940-52719959 | MS.gene55125:intron | 35.0% |
!! | AGCTCTGAAAATTGGTGTTA+CGG | + | chr2.1:52724043-52724062 | MS.gene55125:intron | 35.0% |
!! | TGTTTGTGATGGGTTAAAAG+TGG | + | chr2.1:52719649-52719668 | MS.gene55125:intron | 35.0% |
!! | TTAAGTTGGCGAAATATGGT+TGG | + | chr2.1:52722750-52722769 | MS.gene55125:intron | 35.0% |
!! | TTACGGAATGAAAAGTGTTC+CGG | + | chr2.1:52723924-52723943 | MS.gene55125:intron | 35.0% |
!!! | ACACCGGAAAAGTTTTAAGA+AGG | + | chr2.1:52723196-52723215 | MS.gene55125:intron | 35.0% |
!!! | GAAAAGTTTTAAGAAGGTCC+AGG | + | chr2.1:52723202-52723221 | MS.gene55125:intron | 35.0% |
AACACACTAATAAAGCGGAG+TGG | + | chr2.1:52719248-52719267 | MS.gene55125:intron | 40.0% | |
AAGCACAAAACCACAAATGG+CGG | - | chr2.1:52718615-52718634 | None:intergenic | 40.0% | |
AAGGTTACAATAGGAGAGTG+TGG | - | chr2.1:52724612-52724631 | None:intergenic | 40.0% | |
AAGTCACAACTTCAGTGCTA+TGG | + | chr2.1:52722004-52722023 | MS.gene55125:CDS | 40.0% | |
ACACACTAATAAAGCGGAGT+GGG | + | chr2.1:52719249-52719268 | MS.gene55125:intron | 40.0% | |
ACATGACAACCATGTGAGAT+AGG | - | chr2.1:52719617-52719636 | None:intergenic | 40.0% | |
AGAGTCCAAAGGAGAAACTT+GGG | + | chr2.1:52724515-52724534 | MS.gene55125:CDS | 40.0% | |
AGTACAGAGGACTTGATTTC+GGG | + | chr2.1:52724205-52724224 | MS.gene55125:intron | 40.0% | |
ATATACCAAAGTTGCCGGAT+TGG | + | chr2.1:52722414-52722433 | MS.gene55125:intron | 40.0% | |
ATCATGTAATTGTGCAGTGG+TGG | + | chr2.1:52720856-52720875 | MS.gene55125:intron | 40.0% | |
ATGCAGTACTGTAACACTGA+AGG | + | chr2.1:52723693-52723712 | MS.gene55125:intron | 40.0% | |
CAATACAACTGTCATCGATG+TGG | - | chr2.1:52718762-52718781 | None:intergenic | 40.0% | |
CAGTACAGAGGACTTGATTT+CGG | + | chr2.1:52724204-52724223 | MS.gene55125:intron | 40.0% | |
CATATGTCTCTCCATGATTG+AGG | - | chr2.1:52723326-52723345 | None:intergenic | 40.0% | |
CTAATCGAGTCACTAAAGTG+AGG | + | chr2.1:52722482-52722501 | MS.gene55125:intron | 40.0% | |
GACTCATATCTGTTGTAGCA+TGG | + | chr2.1:52722095-52722114 | MS.gene55125:CDS | 40.0% | |
GAGACTCATCATGTTTCCAA+GGG | + | chr2.1:52722178-52722197 | MS.gene55125:CDS | 40.0% | |
GAGCAACACCAAAAATTGGA+GGG | - | chr2.1:52722138-52722157 | None:intergenic | 40.0% | |
GAGCATGCAAGACTTGAAAT+CGG | + | chr2.1:52724015-52724034 | MS.gene55125:intron | 40.0% | |
GCTTAGTAAGTCTGAAGATG+TGG | - | chr2.1:52722044-52722063 | None:intergenic | 40.0% | |
GTCTGTGCTTCATAGTTTAC+AGG | + | chr2.1:52721888-52721907 | MS.gene55125:intron | 40.0% | |
GTGAAAAGAAAAAACGAGCG+CGG | + | chr2.1:52720878-52720897 | MS.gene55125:intron | 40.0% | |
GTGTATAGAAACAGGTCTTG+TGG | + | chr2.1:52723422-52723441 | MS.gene55125:CDS | 40.0% | |
TATCCTGCTGCAAAGTTCAA+TGG | + | chr2.1:52722934-52722953 | MS.gene55125:CDS | 40.0% | |
TCAAAGCAAAGAAGGGTCTT+GGG | + | chr2.1:52724560-52724579 | MS.gene55125:CDS | 40.0% | |
TCAAGAGAAAGAGAGTCCAA+AGG | + | chr2.1:52724504-52724523 | MS.gene55125:CDS | 40.0% | |
TCACATGTCATACTCTTTGG+CGG | - | chr2.1:52719562-52719581 | None:intergenic | 40.0% | |
TCTCACAACTTAGCCAACTT+AGG | + | chr2.1:52722299-52722318 | MS.gene55125:intron | 40.0% | |
TGAGACTCATCATGTTTCCA+AGG | + | chr2.1:52722177-52722196 | MS.gene55125:CDS | 40.0% | |
TGATGAGTCTCACCAAGAAT+TGG | - | chr2.1:52722169-52722188 | None:intergenic | 40.0% | |
TGCATGAAAGGGGAAAACTT+TGG | - | chr2.1:52721457-52721476 | None:intergenic | 40.0% | |
TGTTACGGTCTGTAAAATCG+AGG | + | chr2.1:52720773-52720792 | MS.gene55125:intron | 40.0% | |
TTACCATTGAACTTTGCAGC+AGG | - | chr2.1:52722940-52722959 | None:intergenic | 40.0% | |
! | ACATTGTGTTGTTGGTTGCT+TGG | + | chr2.1:52721952-52721971 | MS.gene55125:intron | 40.0% |
! | AGGTTACAATAGGAGAGTGT+GGG | - | chr2.1:52724611-52724630 | None:intergenic | 40.0% |
! | AGTACTTTTGTGTACCGGAA+AGG | - | chr2.1:52724160-52724179 | None:intergenic | 40.0% |
! | ATCTGATCTCACACGTTTTC+AGG | + | chr2.1:52720439-52720458 | MS.gene55125:CDS | 40.0% |
! | CAAATAAGAGCCGATTCAGT+TGG | - | chr2.1:52724396-52724415 | None:intergenic | 40.0% |
! | CAACTGAATCGGCTCTTATT+TGG | + | chr2.1:52724394-52724413 | MS.gene55125:CDS | 40.0% |
! | GTCATCCCTTTATTTAACCG+TGG | + | chr2.1:52719705-52719724 | MS.gene55125:intron | 40.0% |
! | TAGCACTGAAGTTGTGACTT+TGG | - | chr2.1:52722004-52722023 | None:intergenic | 40.0% |
! | TCCTGTTACTGGAGTTGATT+GGG | + | chr2.1:52723380-52723399 | MS.gene55125:CDS | 40.0% |
! | TGTGGGACCAACTTTTGAAT+AGG | - | chr2.1:52724594-52724613 | None:intergenic | 40.0% |
! | TTACTGGAGTTGATTGGGTT+GGG | + | chr2.1:52723385-52723404 | MS.gene55125:CDS | 40.0% |
! | TTCCTGTTACTGGAGTTGAT+TGG | + | chr2.1:52723379-52723398 | MS.gene55125:CDS | 40.0% |
!! | AAAAGTGGAGCGGACTAAAA+AGG | + | chr2.1:52719664-52719683 | MS.gene55125:intron | 40.0% |
!! | AAAGTGGAGCGGACTAAAAA+GGG | + | chr2.1:52719665-52719684 | MS.gene55125:intron | 40.0% |
!! | ATGCTAGACTTTTGGTGTAC+CGG | - | chr2.1:52723946-52723965 | None:intergenic | 40.0% |
!! | CAAGCTATGAAGCACTGATA+CGG | + | chr2.1:52721724-52721743 | MS.gene55125:intron | 40.0% |
!! | GGATATTACAACTTTGGAGC+CGG | - | chr2.1:52721326-52721345 | None:intergenic | 40.0% |
!!! | GCGTTACACGCTTTTTTTCT+TGG | + | chr2.1:52719964-52719983 | MS.gene55125:intron | 40.0% |
AAACGTGTGAGATCAGATCC+TGG | - | chr2.1:52720437-52720456 | None:intergenic | 45.0% | |
AAACTGAGGCTCCTCAATCA+TGG | + | chr2.1:52723312-52723331 | MS.gene55125:CDS | 45.0% | |
AAGCCATCTTGAGCAAAGAC+TGG | + | chr2.1:52724430-52724449 | MS.gene55125:CDS | 45.0% | |
AAGTAGGCCTAATCCCACTA+GGG | + | chr2.1:52724092-52724111 | MS.gene55125:intron | 45.0% | |
AATTCAGGTCAAGGGACTGA+AGG | - | chr2.1:52724127-52724146 | None:intergenic | 45.0% | |
ACCCAATCAACTCCAGTAAC+AGG | - | chr2.1:52723384-52723403 | None:intergenic | 45.0% | |
ACTTGGACTTGCCTAATCTG+AGG | + | chr2.1:52721862-52721881 | MS.gene55125:intron | 45.0% | |
AGCCATCTTGAGCAAAGACT+GGG | + | chr2.1:52724431-52724450 | MS.gene55125:CDS | 45.0% | |
AGGAACCCAAGTTTCTCCTT+TGG | - | chr2.1:52724523-52724542 | None:intergenic | 45.0% | |
AGTCTTTGCTCAAGATGGCT+TGG | - | chr2.1:52724431-52724450 | None:intergenic | 45.0% | |
ATGGATCATCTTACCTGCAG+TGG | - | chr2.1:52721923-52721942 | None:intergenic | 45.0% | |
ATTCAGGTCAAGGGACTGAA+GGG | - | chr2.1:52724126-52724145 | None:intergenic | 45.0% | |
CACACTAATAAAGCGGAGTG+GGG | + | chr2.1:52719250-52719269 | MS.gene55125:intron | 45.0% | |
CAGTTAATGGTCACTGGGAT+AGG | + | chr2.1:52723547-52723566 | MS.gene55125:CDS | 45.0% | |
CATCACAAACAGGGTGAGAT+GGG | - | chr2.1:52719640-52719659 | None:intergenic | 45.0% | |
CATCTCACCCTGTTTGTGAT+GGG | + | chr2.1:52719639-52719658 | MS.gene55125:intron | 45.0% | |
CGATGTTTGATTGTGGCTAG+TGG | + | chr2.1:52718366-52718385 | MS.gene55125:intron | 45.0% | |
CTCAAAGCAAAGAAGGGTCT+TGG | + | chr2.1:52724559-52724578 | MS.gene55125:CDS | 45.0% | |
GAAAATATGGTCCAAGTGGC+TGG | + | chr2.1:52720693-52720712 | MS.gene55125:intron | 45.0% | |
GAGAGTCCAAAGGAGAAACT+TGG | + | chr2.1:52724514-52724533 | MS.gene55125:CDS | 45.0% | |
GATTAGGCAAGTCCAAGTGT+CGG | - | chr2.1:52721860-52721879 | None:intergenic | 45.0% | |
GGAGCAACACCAAAAATTGG+AGG | - | chr2.1:52722139-52722158 | None:intergenic | 45.0% | |
TCAGTCCCTTGACCTGAATT+GGG | + | chr2.1:52724127-52724146 | MS.gene55125:intron | 45.0% | |
TGTGGAGCAAAAACAAAGGG+AGG | + | chr2.1:52724479-52724498 | MS.gene55125:CDS | 45.0% | |
TTCAGTCCCTTGACCTGAAT+TGG | + | chr2.1:52724126-52724145 | MS.gene55125:intron | 45.0% | |
TTCCCAGTCTTTGCTCAAGA+TGG | - | chr2.1:52724436-52724455 | None:intergenic | 45.0% | |
TTCTACGCGGTCAATCACAT+TGG | - | chr2.1:52719018-52719037 | None:intergenic | 45.0% | |
! | AAAAAAGCGTGTAACGCACC+AGG | - | chr2.1:52719961-52719980 | None:intergenic | 45.0% |
! | AAAAAGCGTGTAACGCACCA+GGG | - | chr2.1:52719960-52719979 | None:intergenic | 45.0% |
! | ACTAGTCGAATCGGCTCATT+AGG | + | chr2.1:52722625-52722644 | MS.gene55125:intron | 45.0% |
! | GTATATGTGTCGATGTCGTG+CGG | + | chr2.1:52721814-52721833 | MS.gene55125:intron | 45.0% |
! | GTTACTGGAGTTGATTGGGT+TGG | + | chr2.1:52723384-52723403 | MS.gene55125:CDS | 45.0% |
! | GTTGGCCTGATTGACTGAAT+CGG | + | chr2.1:52722436-52722455 | MS.gene55125:intron | 45.0% |
!! | AAATGTTAGGATGGGTTGGC+TGG | - | chr2.1:52722462-52722481 | None:intergenic | 45.0% |
!! | AAGTGGAGCGGACTAAAAAG+GGG | + | chr2.1:52719666-52719685 | MS.gene55125:intron | 45.0% |
!! | CGGACAGTAGCTCTGAAAAT+TGG | + | chr2.1:52724035-52724054 | MS.gene55125:intron | 45.0% |
!! | GTGATGGGTTAAAAGTGGAG+CGG | + | chr2.1:52719654-52719673 | MS.gene55125:intron | 45.0% |
!! | ATAAAATAAAATAAAAACTT+TGG | - | chr2.1:52721118-52721137 | None:intergenic | 5.0% |
!!! | AAAAAGTTATTTTTTTTTTA+AGG | + | chr2.1:52719462-52719481 | MS.gene55125:intron | 5.0% |
AAAGGGATGACAATGCGGGT+TGG | - | chr2.1:52719696-52719715 | None:intergenic | 50.0% | |
AAAGGTAACCCGCCCAATTC+AGG | - | chr2.1:52724142-52724161 | None:intergenic | 50.0% | |
AACAGGTAAGCAGGTCCGAT+TGG | - | chr2.1:52722573-52722592 | None:intergenic | 50.0% | |
AAGCTCAGGTGCACGGAAAA+CGG | + | chr2.1:52723289-52723308 | MS.gene55125:CDS | 50.0% | |
ACAGTCCCCTCTAGGTAGTT+CGG | + | chr2.1:52723158-52723177 | MS.gene55125:intron | 50.0% | |
ACAGTTTGAAGGCGACTCAG+TGG | - | chr2.1:52723983-52724002 | None:intergenic | 50.0% | |
ACCAAAACGTGTCCGACACT+TGG | + | chr2.1:52721845-52721864 | MS.gene55125:intron | 50.0% | |
ACCAACCGAACTACCTAGAG+GGG | - | chr2.1:52723166-52723185 | None:intergenic | 50.0% | |
ACTGAGTCGCCTTCAAACTG+TGG | + | chr2.1:52723982-52724001 | MS.gene55125:intron | 50.0% | |
AGGTACTTCAGTGGAAGCTC+AGG | + | chr2.1:52723275-52723294 | MS.gene55125:intron | 50.0% | |
CACCAACCGAACTACCTAGA+GGG | - | chr2.1:52723167-52723186 | None:intergenic | 50.0% | |
CAGTTTGAAGGCGACTCAGT+GGG | - | chr2.1:52723982-52724001 | None:intergenic | 50.0% | |
CATCGTGTATCCGCCATTTG+TGG | + | chr2.1:52718602-52718621 | MS.gene55125:intron | 50.0% | |
CATGAAGGGCAGATACAGCA+GGG | - | chr2.1:52722873-52722892 | None:intergenic | 50.0% | |
CCATCACAAACAGGGTGAGA+TGG | - | chr2.1:52719641-52719660 | None:intergenic | 50.0% | |
CCATCTCACCCTGTTTGTGA+TGG | + | chr2.1:52719638-52719657 | MS.gene55125:intron | 50.0% | |
CCTTCATGCAACTGACGAGA+CGG | + | chr2.1:52722885-52722904 | MS.gene55125:CDS | 50.0% | |
CGTCTCGTCAGTTGCATGAA+GGG | - | chr2.1:52722887-52722906 | None:intergenic | 50.0% | |
CGTTACCTCTGCATCCTTGA+CGG | - | chr2.1:52723788-52723807 | None:intergenic | 50.0% | |
CTTCTTAAGAATGTGCGGCC+AGG | + | chr2.1:52720416-52720435 | MS.gene55125:CDS | 50.0% | |
GAAGTAGGCCTAATCCCACT+AGG | + | chr2.1:52724091-52724110 | MS.gene55125:intron | 50.0% | |
GCACAGACACTCCTCAGATT+AGG | - | chr2.1:52721876-52721895 | None:intergenic | 50.0% | |
GGGTTGGGAATGTCAACATC+AGG | + | chr2.1:52723400-52723419 | MS.gene55125:CDS | 50.0% | |
GGTCAATACTACCAGCCACT+TGG | - | chr2.1:52720707-52720726 | None:intergenic | 50.0% | |
GTCAATCAGGCCAACCAATC+CGG | - | chr2.1:52722431-52722450 | None:intergenic | 50.0% | |
GTTTGCTTCATCAGAGCGTG+TGG | + | chr2.1:52724370-52724389 | MS.gene55125:intron | 50.0% | |
TACGCGGTCAATCACATTGG+TGG | - | chr2.1:52719015-52719034 | None:intergenic | 50.0% | |
TAGGTACTACAGTCCCCTCT+AGG | + | chr2.1:52723150-52723169 | MS.gene55125:intron | 50.0% | |
TCACCAACCGAACTACCTAG+AGG | - | chr2.1:52723168-52723187 | None:intergenic | 50.0% | |
TGCACGGAAAACGGAAACTG+AGG | + | chr2.1:52723298-52723317 | MS.gene55125:CDS | 50.0% | |
TGTTCCCTCACACTTCTACG+CGG | - | chr2.1:52719031-52719050 | None:intergenic | 50.0% | |
! | ACCAAAAATTGGAGGGCGTG+TGG | - | chr2.1:52722131-52722150 | None:intergenic | 50.0% |
! | ACCACACGCCCTCCAATTTT+TGG | + | chr2.1:52722127-52722146 | MS.gene55125:CDS | 50.0% |
! | ATTGACCGCGTAGAAGTGTG+AGG | + | chr2.1:52719023-52719042 | MS.gene55125:intron | 50.0% |
! | CAGGAGATTGATTCCACTGC+AGG | + | chr2.1:52721907-52721926 | MS.gene55125:intron | 50.0% |
! | GTTGGTGAGCTAAGGAACAC+CGG | + | chr2.1:52723180-52723199 | MS.gene55125:intron | 50.0% |
! | TCGAATCGGCTCATTAGGCT+AGG | + | chr2.1:52722630-52722649 | MS.gene55125:intron | 50.0% |
! | TTGACCGCGTAGAAGTGTGA+GGG | + | chr2.1:52719024-52719043 | MS.gene55125:intron | 50.0% |
!! | AATTGGGCGGGTTACCTTTC+CGG | + | chr2.1:52724143-52724162 | MS.gene55125:intron | 50.0% |
!! | ACCAAAGTTGCCGGATTGGT+TGG | + | chr2.1:52722418-52722437 | MS.gene55125:intron | 50.0% |
!! | GTAGTTCGGTTGGTGAGCTA+AGG | + | chr2.1:52723172-52723191 | MS.gene55125:intron | 50.0% |
!!! | TCCAAGTGTCGGACACGTTT+TGG | - | chr2.1:52721849-52721868 | None:intergenic | 50.0% |
AACCCGCCCAATTCAGGTCA+AGG | - | chr2.1:52724136-52724155 | None:intergenic | 55.0% | |
ACCCGCCCAATTCAGGTCAA+GGG | - | chr2.1:52724135-52724154 | None:intergenic | 55.0% | |
ACCTCTGCATCCTTGACGGT+AGG | - | chr2.1:52723784-52723803 | None:intergenic | 55.0% | |
CAACTGTCATCGATGTGGCG+TGG | - | chr2.1:52718757-52718776 | None:intergenic | 55.0% | |
CAGTCAGCCCTAGTGGGATT+AGG | - | chr2.1:52724102-52724121 | None:intergenic | 55.0% | |
CATCCTTGACGGTAGGAGCT+TGG | - | chr2.1:52723777-52723796 | None:intergenic | 55.0% | |
CCGTCTCGTCAGTTGCATGA+AGG | - | chr2.1:52722888-52722907 | None:intergenic | 55.0% | |
CTAATCCCACTAGGGCTGAC+TGG | + | chr2.1:52724100-52724119 | MS.gene55125:intron | 55.0% | |
GAGCGTGTGGCCAACTGAAT+CGG | + | chr2.1:52724383-52724402 | MS.gene55125:intron | 55.0% | |
GCATGAAGGGCAGATACAGC+AGG | - | chr2.1:52722874-52722893 | None:intergenic | 55.0% | |
GCCAACCAATCCGGCAACTT+TGG | - | chr2.1:52722422-52722441 | None:intergenic | 55.0% | |
GTCCCTTGACCTGAATTGGG+CGG | + | chr2.1:52724130-52724149 | MS.gene55125:intron | 55.0% | |
TCAGTGGAAGCTCAGGTGCA+CGG | + | chr2.1:52723282-52723301 | MS.gene55125:CDS | 55.0% | |
TCCCCTCTAGGTAGTTCGGT+TGG | + | chr2.1:52723162-52723181 | MS.gene55125:intron | 55.0% | |
TCCCTTGACCTGAATTGGGC+GGG | + | chr2.1:52724131-52724150 | MS.gene55125:intron | 55.0% | |
TCCTACCGTCAAGGATGCAG+AGG | + | chr2.1:52723780-52723799 | MS.gene55125:CDS | 55.0% | |
! | GCTGGCCGATTCAGTCAATC+AGG | - | chr2.1:52722444-52722463 | None:intergenic | 55.0% |
! | GTGTCGATGTCGTGCGGTAT+CGG | + | chr2.1:52721820-52721839 | MS.gene55125:intron | 55.0% |
!! | TACAACTTTGGAGCCGGTCG+AGG | - | chr2.1:52721320-52721339 | None:intergenic | 55.0% |
AAGGGCCAGTCAGCCCTAGT+GGG | - | chr2.1:52724108-52724127 | None:intergenic | 60.0% | |
GAAGGGCAGATACAGCAGGG+TGG | - | chr2.1:52722870-52722889 | None:intergenic | 60.0% | |
GCTCCAAGCTCCTACCGTCA+AGG | + | chr2.1:52723771-52723790 | MS.gene55125:CDS | 60.0% | |
TCACAGTGGTCCTCCTCGAC+CGG | + | chr2.1:52721304-52721323 | MS.gene55125:intron | 60.0% | |
!! | AACTTTGGAGCCGGTCGAGG+AGG | - | chr2.1:52721317-52721336 | None:intergenic | 60.0% |
GAAGGGCCAGTCAGCCCTAG+TGG | - | chr2.1:52724109-52724128 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 52718207 | 52724709 | 52718207 | ID=MS.gene55125 |
chr2.1 | mRNA | 52718207 | 52724709 | 52718207 | ID=MS.gene55125.t1;Parent=MS.gene55125 |
chr2.1 | exon | 52718207 | 52718209 | 52718207 | ID=MS.gene55125.t1.exon1;Parent=MS.gene55125.t1 |
chr2.1 | CDS | 52718207 | 52718209 | 52718207 | ID=cds.MS.gene55125.t1;Parent=MS.gene55125.t1 |
chr2.1 | exon | 52720305 | 52720460 | 52720305 | ID=MS.gene55125.t1.exon2;Parent=MS.gene55125.t1 |
chr2.1 | CDS | 52720305 | 52720460 | 52720305 | ID=cds.MS.gene55125.t1;Parent=MS.gene55125.t1 |
chr2.1 | exon | 52721980 | 52722225 | 52721980 | ID=MS.gene55125.t1.exon3;Parent=MS.gene55125.t1 |
chr2.1 | CDS | 52721980 | 52722225 | 52721980 | ID=cds.MS.gene55125.t1;Parent=MS.gene55125.t1 |
chr2.1 | exon | 52722859 | 52722955 | 52722859 | ID=MS.gene55125.t1.exon4;Parent=MS.gene55125.t1 |
chr2.1 | CDS | 52722859 | 52722955 | 52722859 | ID=cds.MS.gene55125.t1;Parent=MS.gene55125.t1 |
chr2.1 | exon | 52723277 | 52723568 | 52723277 | ID=MS.gene55125.t1.exon5;Parent=MS.gene55125.t1 |
chr2.1 | CDS | 52723277 | 52723568 | 52723277 | ID=cds.MS.gene55125.t1;Parent=MS.gene55125.t1 |
chr2.1 | exon | 52723699 | 52723801 | 52723699 | ID=MS.gene55125.t1.exon6;Parent=MS.gene55125.t1 |
chr2.1 | CDS | 52723699 | 52723801 | 52723699 | ID=cds.MS.gene55125.t1;Parent=MS.gene55125.t1 |
chr2.1 | exon | 52724384 | 52724623 | 52724384 | ID=MS.gene55125.t1.exon7;Parent=MS.gene55125.t1 |
chr2.1 | CDS | 52724384 | 52724623 | 52724384 | ID=cds.MS.gene55125.t1;Parent=MS.gene55125.t1 |
chr2.1 | exon | 52724701 | 52724709 | 52724701 | ID=MS.gene55125.t1.exon8;Parent=MS.gene55125.t1 |
chr2.1 | CDS | 52724701 | 52724709 | 52724701 | ID=cds.MS.gene55125.t1;Parent=MS.gene55125.t1 |
Gene Sequence |
Protein sequence |