Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55744.t1 | XP_013447111.1 | 97.6 | 370 | 9 | 0 | 1 | 370 | 1 | 370 | 3.20E-197 | 697.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55744.t1 | A0A072TW77 | 97.6 | 370 | 9 | 0 | 1 | 370 | 1 | 370 | 2.3e-197 | 697.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05190 | MS.gene55744 | 0.824264 | 8.87E-54 | -1.69E-46 |
| MS.gene057094 | MS.gene55744 | 0.818152 | 2.28E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene55744 | 0.835233 | 1.89E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55744.t1 | MTR_8g098940 | 97.568 | 370 | 9 | 0 | 1 | 370 | 1 | 370 | 0.0 | 741 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55744.t1 | AT1G63980 | 52.152 | 395 | 159 | 5 | 1 | 372 | 1 | 388 | 7.71e-123 | 360 |
| MS.gene55744.t1 | AT1G63980 | 52.393 | 397 | 157 | 6 | 1 | 372 | 1 | 390 | 5.71e-122 | 358 |
Find 87 sgRNAs with CRISPR-Local
Find 463 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTCTTCAGCTTCATTT+TGG | 0.132422 | 4.3:+5321406 | None:intergenic |
| ACGTAATTGAGAGGGATTTC+AGG | 0.274276 | 4.3:+5327356 | None:intergenic |
| ACGGAAAGCGGCGGATTTCC+TGG | 0.296784 | 4.3:+5327325 | None:intergenic |
| ATAGCATCCAGCTACTTTCT+TGG | 0.306181 | 4.3:+5321556 | None:intergenic |
| GAGTGGTGGGGCAATAAGTT+TGG | 0.332881 | 4.3:-5321965 | MS.gene55744:CDS |
| CAGGGTACAAAGACATCATT+TGG | 0.354894 | 4.3:-5321530 | MS.gene55744:CDS |
| AATAAGTTTGGGTTTGTCTC+TGG | 0.369180 | 4.3:-5321953 | MS.gene55744:CDS |
| CACCACTCTGGATGGATATC+AGG | 0.397376 | 4.3:+5321980 | None:intergenic |
| ACCAGTAGTGTCTTGTTTGT+TGG | 0.402610 | 4.3:+5327127 | None:intergenic |
| AGTGGTGGGGCAATAAGTTT+GGG | 0.402996 | 4.3:-5321964 | MS.gene55744:CDS |
| AATAGAGAGTAACACGGTTA+AGG | 0.407598 | 4.3:-5326424 | MS.gene55744:intron |
| TGACAATGCTGATGATGAAT+TGG | 0.413502 | 4.3:-5325119 | MS.gene55744:CDS |
| TCTTCAAAATCTTGAAAGTC+AGG | 0.415020 | 4.3:+5325082 | None:intergenic |
| TCCTTGTGGTCTAGTAGCTC+TGG | 0.416775 | 4.3:+5326356 | None:intergenic |
| TAGACCTTGCTTTCCTGTTG+TGG | 0.423482 | 4.3:+5321595 | None:intergenic |
| AACTTACAAGAATTCCTTCA+AGG | 0.428878 | 4.3:+5326195 | None:intergenic |
| TCAATTACGTCGGTGTCGCC+AGG | 0.434618 | 4.3:-5327343 | MS.gene55744:CDS |
| AATTCCTTCAAGGTCCTTTG+AGG | 0.436390 | 4.3:+5326205 | None:intergenic |
| TTGTTTAAGGGATGGGAAGA+AGG | 0.443849 | 4.3:-5327200 | MS.gene55744:intron |
| GGTGGAAATGGTGGTGGAAA+AGG | 0.445635 | 4.3:-5321447 | MS.gene55744:CDS |
| ACATCTGAAATTGCTAAAAG+TGG | 0.450166 | 4.3:-5321890 | MS.gene55744:CDS |
| ACAGCAACCTCAGGATCAAC+AGG | 0.453089 | 4.3:+5326381 | None:intergenic |
| TCACTTTATGTACAGGCGCC+TGG | 0.454342 | 4.3:-5321301 | MS.gene55744:intron |
| TTCCAGGATAAATCCACAAC+AGG | 0.459724 | 4.3:-5321608 | MS.gene55744:intron |
| TGATGTTATACCTGTGTCAT+TGG | 0.466241 | 4.3:+5326537 | None:intergenic |
| GTGTCAAATGCCCATTGGTT+CGG | 0.470536 | 4.3:+5326715 | None:intergenic |
| GGAAATGGTGGTGGAAAAGG+TGG | 0.470669 | 4.3:-5321444 | MS.gene55744:CDS |
| TATTCCTCAAAGGACCTTGA+AGG | 0.471143 | 4.3:-5326209 | MS.gene55744:CDS |
| TTCAGTTTCAATGATTCTCC+AGG | 0.471393 | 4.3:+5321283 | None:intergenic |
| AAGTTTGGGTTTGTCTCTGG+TGG | 0.475356 | 4.3:-5321950 | MS.gene55744:CDS |
| TTTGTCTCTGGTGGATTGCT+CGG | 0.476345 | 4.3:-5321941 | MS.gene55744:CDS |
| AACTTATTGCCCCACCACTC+TGG | 0.483516 | 4.3:+5321968 | None:intergenic |
| TGGGAAGAAGGAGAAGGTCT+TGG | 0.485044 | 4.3:-5327188 | MS.gene55744:CDS |
| AGGGATTTCAGGCGCCGCCA+TGG | 0.485148 | 4.3:+5327367 | None:intergenic |
| GGTCCTTGACTTCAGCTGAC+AGG | 0.488330 | 4.3:-5320879 | MS.gene55744:intron |
| TTTCCGTCTCATGAAGCAAA+TGG | 0.492523 | 4.3:-5327309 | MS.gene55744:intron |
| GACAGGACCAAGAAAGTAGC+TGG | 0.500619 | 4.3:-5321563 | MS.gene55744:CDS |
| ATACCTGTGTCATTGGATAC+TGG | 0.507229 | 4.3:+5326544 | None:intergenic |
| AACAGATGATGAGGTGGAAA+TGG | 0.511159 | 4.3:-5321459 | MS.gene55744:CDS |
| TGTTGCTTACTTGAAGCAAA+AGG | 0.520825 | 4.3:-5321191 | MS.gene55744:intron |
| CGAAGGGAAAACAGTGCGAT+TGG | 0.521301 | 4.3:-5320838 | MS.gene55744:CDS |
| ACAACAGGAAAGCAAGGTCT+AGG | 0.522374 | 4.3:-5321593 | MS.gene55744:CDS |
| AGATACAAGAAAAGAGAAAG+AGG | 0.522803 | 4.3:-5326248 | MS.gene55744:CDS |
| TTTAGCAATTTCAGATGTAG+AGG | 0.526470 | 4.3:+5321895 | None:intergenic |
| CTGATATCCATCCAGAGTGG+TGG | 0.533288 | 4.3:-5321979 | MS.gene55744:CDS |
| AAAGCAAGGTCTAGGTATCA+AGG | 0.534292 | 4.3:-5321585 | MS.gene55744:CDS |
| TGATGAGGTGGAAATGGTGG+TGG | 0.535119 | 4.3:-5321453 | MS.gene55744:CDS |
| AAGGTCTAGGTATCAAGGAC+AGG | 0.540732 | 4.3:-5321580 | MS.gene55744:CDS |
| ATCAACAGGAACAGCCGCCT+CGG | 0.543358 | 4.3:+5326395 | None:intergenic |
| TGATATCCATCCAGAGTGGT+GGG | 0.544536 | 4.3:-5321978 | MS.gene55744:CDS |
| GAACCATTTGCTTCATGAGA+CGG | 0.548721 | 4.3:+5327306 | None:intergenic |
| TATTGCCCCACCACTCTGGA+TGG | 0.549715 | 4.3:+5321972 | None:intergenic |
| ATTAGAGAAGCCGAACCAAT+GGG | 0.550574 | 4.3:-5326725 | MS.gene55744:CDS |
| CATCTGAAATTGCTAAAAGT+GGG | 0.561005 | 4.3:-5321889 | MS.gene55744:CDS |
| TGTCTCTCATTATTCCTCAA+AGG | 0.561666 | 4.3:-5326219 | MS.gene55744:CDS |
| GATTAGAGAAGCCGAACCAA+TGG | 0.568653 | 4.3:-5326726 | MS.gene55744:CDS |
| ACCAACAAACAAGACACTAC+TGG | 0.578786 | 4.3:-5327128 | MS.gene55744:intron |
| GGCTGTTCCTGTTGATCCTG+AGG | 0.579039 | 4.3:-5326388 | MS.gene55744:CDS |
| AAGGGATGGGAAGAAGGAGA+AGG | 0.581093 | 4.3:-5327194 | MS.gene55744:CDS |
| AAAGAGTGACATATGTGAGG+AGG | 0.581608 | 4.3:-5325146 | MS.gene55744:CDS |
| AGAGAGTAACACGGTTAAGG+TGG | 0.584039 | 4.3:-5326421 | MS.gene55744:CDS |
| AGATGATGAGGTGGAAATGG+TGG | 0.587185 | 4.3:-5321456 | MS.gene55744:CDS |
| ATACTTGGACTAAATTGTAG+AGG | 0.589919 | 4.3:+5321828 | None:intergenic |
| CTTCATGAGACGGAAAGCGG+CGG | 0.593596 | 4.3:+5327316 | None:intergenic |
| GATACAAGAAAAGAGAAAGA+GGG | 0.596354 | 4.3:-5326247 | MS.gene55744:CDS |
| GCTCTGGATACAGCAACCTC+AGG | 0.600918 | 4.3:+5326372 | None:intergenic |
| AAATCCACAACAGGAAAGCA+AGG | 0.604142 | 4.3:-5321599 | MS.gene55744:CDS |
| GACTTCAGCTGACAGGTAGT+CGG | 0.607201 | 4.3:-5320872 | MS.gene55744:intron |
| AAGAGTGACATATGTGAGGA+GGG | 0.607283 | 4.3:-5325145 | MS.gene55744:CDS |
| AAACGAAACAGATGATGAGG+TGG | 0.610509 | 4.3:-5321465 | MS.gene55744:CDS |
| AGAAAACGAAACAGATGATG+AGG | 0.613423 | 4.3:-5321468 | MS.gene55744:CDS |
| TTGCTTCATGAGACGGAAAG+CGG | 0.618335 | 4.3:+5327313 | None:intergenic |
| TGAAATTGCTAAAAGTGGGA+TGG | 0.620584 | 4.3:-5321885 | MS.gene55744:CDS |
| CACGGTTAAGGTGGAAACCG+AGG | 0.620613 | 4.3:-5326412 | MS.gene55744:CDS |
| GTGTGGTGTCAAATGCCCAT+TGG | 0.646928 | 4.3:+5326710 | None:intergenic |
| GCGACACCGACGTAATTGAG+AGG | 0.647025 | 4.3:+5327347 | None:intergenic |
| GAGCTACTAGACCACAAGGA+AGG | 0.652543 | 4.3:-5326353 | MS.gene55744:intron |
| GAGTATGTTATCAAATTGTG+TGG | 0.654612 | 4.3:+5326693 | None:intergenic |
| CGACACCGACGTAATTGAGA+GGG | 0.655049 | 4.3:+5327348 | None:intergenic |
| GATATCCATCCAGAGTGGTG+GGG | 0.660296 | 4.3:-5321977 | MS.gene55744:CDS |
| TCCAGAGCTACTAGACCACA+AGG | 0.671642 | 4.3:-5326357 | MS.gene55744:CDS |
| GCGCCAGTATCCAATGACAC+AGG | 0.676662 | 4.3:-5326547 | MS.gene55744:intron |
| GAAATCCCTCTCAATTACGT+CGG | 0.692335 | 4.3:-5327353 | MS.gene55744:CDS |
| AAACGTACAGACCTTCCTTG+TGG | 0.713884 | 4.3:+5326342 | None:intergenic |
| GGTTTAAATAGAGAGTAACA+CGG | 0.716553 | 4.3:-5326430 | MS.gene55744:intron |
| GGTTAAGGTGGAAACCGAGG+CGG | 0.731442 | 4.3:-5326409 | MS.gene55744:CDS |
| GTCCTGATATCCATCCAGAG+TGG | 0.749851 | 4.3:-5321982 | MS.gene55744:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAGAAAAAAAAATTG+GGG | + | chr4.3:5324315-5324334 | None:intergenic | 10.0% |
| !! | ACAAAATAAGAAAAAAAAAT+TGG | + | chr4.3:5324317-5324336 | None:intergenic | 10.0% |
| !! | CAAAATAAGAAAAAAAAATT+GGG | + | chr4.3:5324316-5324335 | None:intergenic | 10.0% |
| !! | CAAAATTAAAGTAAAAAAAA+AGG | - | chr4.3:5323903-5323922 | MS.gene55744:intron | 10.0% |
| !! | AAATAAGAAAAAAAAATTGG+GGG | + | chr4.3:5324314-5324333 | None:intergenic | 15.0% |
| !!! | ACTTTTTCTTATTTTTTCTA+TGG | - | chr4.3:5320923-5320942 | MS.gene55744:intron | 15.0% |
| !!! | ATTCAAATTTAAAATAGAAC+AGG | + | chr4.3:5327088-5327107 | None:intergenic | 15.0% |
| !!! | ATTTTACATTGAAAAAGAAA+AGG | - | chr4.3:5325953-5325972 | MS.gene55744:intron | 15.0% |
| !!! | TTGTTTGTTCAATTTTAAAT+AGG | - | chr4.3:5321432-5321451 | MS.gene55744:CDS | 15.0% |
| !!! | TTTTACATTGAAAAAGAAAA+GGG | - | chr4.3:5325954-5325973 | MS.gene55744:intron | 15.0% |
| !! | AATAAGAAAAAAAAATTGGG+GGG | + | chr4.3:5324313-5324332 | None:intergenic | 20.0% |
| !! | AATGAATAGATCTATAGAAT+CGG | + | chr4.3:5322268-5322287 | None:intergenic | 20.0% |
| !! | AATTAATTATTACACCATTC+AGG | + | chr4.3:5326542-5326561 | None:intergenic | 20.0% |
| !! | AATTCGATTCATTTGTTTAA+GGG | - | chr4.3:5320974-5320993 | MS.gene55744:intron | 20.0% |
| !! | ACAATATATTTATCATGCAA+TGG | + | chr4.3:5327178-5327197 | None:intergenic | 20.0% |
| !! | ATGACCTTACAATTATATAA+AGG | - | chr4.3:5326447-5326466 | MS.gene55744:intron | 20.0% |
| !! | ATTAAGCTGTTTATTCAAAT+AGG | - | chr4.3:5321402-5321421 | MS.gene55744:CDS | 20.0% |
| !! | ATTGCATGATAAATATATTG+TGG | - | chr4.3:5327177-5327196 | MS.gene55744:CDS | 20.0% |
| !! | ATTGTTTACTTCTATAATGT+TGG | - | chr4.3:5323006-5323025 | MS.gene55744:intron | 20.0% |
| !! | TATCTTTGTAATCTATTTCA+TGG | - | chr4.3:5322165-5322184 | MS.gene55744:intron | 20.0% |
| !! | TGTTAATGAACATATTATGA+TGG | - | chr4.3:5321713-5321732 | MS.gene55744:intron | 20.0% |
| !! | TTACTTGGTTTAAATATCTT+GGG | + | chr4.3:5323642-5323661 | None:intergenic | 20.0% |
| !! | TTTGAACATGTTTCATTTAT+TGG | + | chr4.3:5325145-5325164 | None:intergenic | 20.0% |
| !!! | AGTCTTTATGTTATTTGTAT+TGG | - | chr4.3:5323154-5323173 | MS.gene55744:intron | 20.0% |
| !!! | CACTTAAGTTTTTATTGAAT+TGG | + | chr4.3:5324093-5324112 | None:intergenic | 20.0% |
| !!! | GTCTTTATGTTATTTGTATT+GGG | - | chr4.3:5323155-5323174 | MS.gene55744:intron | 20.0% |
| !!! | GTTCAATTTTAAATAGGTAT+TGG | - | chr4.3:5321438-5321457 | MS.gene55744:CDS | 20.0% |
| ! | AAAATCAATGAATACAAGCA+AGG | + | chr4.3:5323582-5323601 | None:intergenic | 25.0% |
| ! | AAAGAATGAAAAAGGATTCA+TGG | + | chr4.3:5324624-5324643 | None:intergenic | 25.0% |
| ! | AAAGTAAAAAAAAAGGGCTT+AGG | - | chr4.3:5323910-5323929 | MS.gene55744:intron | 25.0% |
| ! | AAATAGAACAGGAAGAAATT+TGG | + | chr4.3:5327077-5327096 | None:intergenic | 25.0% |
| ! | AAATATGCAACACGAAAAAT+AGG | + | chr4.3:5326833-5326852 | None:intergenic | 25.0% |
| ! | AAGTAAAAAAAAAGGGCTTA+GGG | - | chr4.3:5323911-5323930 | MS.gene55744:intron | 25.0% |
| ! | AATAATCACAGAAATGCAAA+TGG | + | chr4.3:5326117-5326136 | None:intergenic | 25.0% |
| ! | AATTGAAACATGTTCAACAT+TGG | + | chr4.3:5324945-5324964 | None:intergenic | 25.0% |
| ! | ACGTTGCATTAAATCTAAAT+GGG | - | chr4.3:5325707-5325726 | MS.gene55744:intron | 25.0% |
| ! | AGAACTAAATTTCAAGATAC+TGG | + | chr4.3:5326491-5326510 | None:intergenic | 25.0% |
| ! | AGTGTCAATAGAATATAGTA+CGG | + | chr4.3:5322773-5322792 | None:intergenic | 25.0% |
| ! | ATAAGAAAAAAAAATTGGGG+GGG | + | chr4.3:5324312-5324331 | None:intergenic | 25.0% |
| ! | ATATACATTGCAAATCTCTT+TGG | + | chr4.3:5325304-5325323 | None:intergenic | 25.0% |
| ! | ATTGGTGAAAAAAAGAAGAA+AGG | + | chr4.3:5321088-5321107 | None:intergenic | 25.0% |
| ! | ATTTGCAATGTATATCAATG+AGG | - | chr4.3:5325309-5325328 | MS.gene55744:intron | 25.0% |
| ! | CATGATAAATATATTGTGGA+CGG | - | chr4.3:5327181-5327200 | MS.gene55744:CDS | 25.0% |
| ! | CCATAACAATATGATTGTAA+GGG | + | chr4.3:5323941-5323960 | None:intergenic | 25.0% |
| ! | CCATCCTTTATATAATTGTA+AGG | + | chr4.3:5326454-5326473 | None:intergenic | 25.0% |
| ! | CCTTACAATCATATTGTTAT+GGG | - | chr4.3:5323939-5323958 | MS.gene55744:intron | 25.0% |
| ! | CCTTACAATTATATAAAGGA+TGG | - | chr4.3:5326451-5326470 | MS.gene55744:intron | 25.0% |
| ! | GAATTCGATTCATTTGTTTA+AGG | - | chr4.3:5320973-5320992 | MS.gene55744:intron | 25.0% |
| ! | GTTACTTGGTTTAAATATCT+TGG | + | chr4.3:5323643-5323662 | None:intergenic | 25.0% |
| ! | TAAAAAAACAAGTCAAGTGA+GGG | - | chr4.3:5324989-5325008 | MS.gene55744:intron | 25.0% |
| ! | TAATTTACTGAAAATCACAG+AGG | + | chr4.3:5321677-5321696 | None:intergenic | 25.0% |
| ! | TATGATAAGTGCTTATGTAT+AGG | + | chr4.3:5321359-5321378 | None:intergenic | 25.0% |
| ! | TATTTAAACCAAGTAACTTG+TGG | - | chr4.3:5323646-5323665 | MS.gene55744:intron | 25.0% |
| ! | TCATACATAACATCTTTACA+TGG | + | chr4.3:5322131-5322150 | None:intergenic | 25.0% |
| ! | TCTTGATCTTGTTCAAAAAA+AGG | + | chr4.3:5326335-5326354 | None:intergenic | 25.0% |
| ! | TTAGTATCTTCAACTTCAAA+AGG | + | chr4.3:5325392-5325411 | None:intergenic | 25.0% |
| !! | AAAAAGAAAAGTCTTTTGAG+AGG | + | chr4.3:5321911-5321930 | None:intergenic | 25.0% |
| !! | AGTTTTTATTGAATTGGAGA+AGG | + | chr4.3:5324087-5324106 | None:intergenic | 25.0% |
| !! | CCTTTTACATTACTTCAAAA+AGG | + | chr4.3:5327138-5327157 | None:intergenic | 25.0% |
| !! | GTTCTGAATAAACAGTAAAT+TGG | + | chr4.3:5321106-5321125 | None:intergenic | 25.0% |
| !!! | CCTTTTTGAAGTAATGTAAA+AGG | - | chr4.3:5327135-5327154 | MS.gene55744:CDS | 25.0% |
| !!! | GAAGGATACAATTTTAGTTT+TGG | + | chr4.3:5324883-5324902 | None:intergenic | 25.0% |
| !!! | GTTTGTGTTTTTATCTATTG+TGG | - | chr4.3:5321735-5321754 | MS.gene55744:intron | 25.0% |
| !!! | TGGAATGTAATTTTAGCAAA+TGG | + | chr4.3:5323717-5323736 | None:intergenic | 25.0% |
| !!! | TTCAAGTTGAAGGAATATAA+TGG | + | chr4.3:5324543-5324562 | None:intergenic | 25.0% |
| !!! | TTCAAGTTGAAGGATTATAA+TGG | - | chr4.3:5325551-5325570 | MS.gene55744:intron | 25.0% |
| !!! | TTTCAAGATTTTGAAGATGA+AGG | - | chr4.3:5323110-5323129 | MS.gene55744:intron | 25.0% |
| AAAAAAGAGTGACATATGTG+AGG | - | chr4.3:5323037-5323056 | MS.gene55744:intron | 30.0% | |
| AAAAAGAAAAGGGTCATTTG+AGG | - | chr4.3:5325964-5325983 | MS.gene55744:intron | 30.0% | |
| AAACATGTTCAACATTGGAA+AGG | + | chr4.3:5324940-5324959 | None:intergenic | 30.0% | |
| AAACCCATCAAGTGTAAATA+TGG | + | chr4.3:5322423-5322442 | None:intergenic | 30.0% | |
| AAAGAAAAACAAGGGATCAA+AGG | - | chr4.3:5321022-5321041 | MS.gene55744:intron | 30.0% | |
| AACTTACAAGAATTCCTTCA+AGG | + | chr4.3:5321994-5322013 | None:intergenic | 30.0% | |
| AAGCCATATTTACACTTGAT+GGG | - | chr4.3:5322417-5322436 | MS.gene55744:intron | 30.0% | |
| AATCAAAAAGTGGGTAAATG+TGG | - | chr4.3:5325738-5325757 | MS.gene55744:intron | 30.0% | |
| AATCACAAAGAAAGAAGTCT+TGG | + | chr4.3:5322817-5322836 | None:intergenic | 30.0% | |
| AATCGCTCAATTGAAACTAT+GGG | - | chr4.3:5325829-5325848 | MS.gene55744:intron | 30.0% | |
| AATCTTGAGCTGCTTATTAA+AGG | - | chr4.3:5324911-5324930 | MS.gene55744:intron | 30.0% | |
| AATGACCATGTATATGTTCT+GGG | + | chr4.3:5322385-5322404 | None:intergenic | 30.0% | |
| AATGCAATATAGACTGATTG+AGG | + | chr4.3:5326168-5326187 | None:intergenic | 30.0% | |
| AATTATCCACTCTAACCAAT+AGG | + | chr4.3:5324395-5324414 | None:intergenic | 30.0% | |
| ACTCAATTGAGAAACTATGA+GGG | - | chr4.3:5325802-5325821 | MS.gene55744:intron | 30.0% | |
| ACTTCATCAACATGTTCATA+GGG | - | chr4.3:5324257-5324276 | MS.gene55744:intron | 30.0% | |
| ACTTCTATAATGTTGGTCAT+AGG | - | chr4.3:5323013-5323032 | MS.gene55744:intron | 30.0% | |
| AGAATAACAGATTGCTCATT+CGG | - | chr4.3:5325337-5325356 | MS.gene55744:intron | 30.0% | |
| AGATACAAGAAAAGAGAAAG+AGG | - | chr4.3:5321938-5321957 | MS.gene55744:CDS | 30.0% | |
| AGTCTATATTGCATTGTTAC+AGG | - | chr4.3:5326173-5326192 | MS.gene55744:intron | 30.0% | |
| ATACTTGGACTAAATTGTAG+AGG | + | chr4.3:5326361-5326380 | None:intergenic | 30.0% | |
| ATATATCCACTGTAACCAAT+AGG | - | chr4.3:5325676-5325695 | MS.gene55744:intron | 30.0% | |
| ATATCATACCACAAGTTACT+TGG | + | chr4.3:5323657-5323676 | None:intergenic | 30.0% | |
| ATCAAAAAGTGGGTAAATGT+GGG | - | chr4.3:5325739-5325758 | MS.gene55744:intron | 30.0% | |
| ATCCTTGACTACTCAAATAT+AGG | - | chr4.3:5324017-5324036 | MS.gene55744:intron | 30.0% | |
| ATCTACTCACATAAGTATGT+CGG | - | chr4.3:5321240-5321259 | MS.gene55744:CDS | 30.0% | |
| ATTTCGGTTAGAGACTTATT+TGG | + | chr4.3:5322211-5322230 | None:intergenic | 30.0% | |
| ATTTCTAACTTAGAGGTGAA+AGG | + | chr4.3:5323688-5323707 | None:intergenic | 30.0% | |
| CAAATACGTCAAAAGAATTC+TGG | + | chr4.3:5325616-5325635 | None:intergenic | 30.0% | |
| CAATCATGATTTCACTATCA+AGG | + | chr4.3:5326860-5326879 | None:intergenic | 30.0% | |
| CACGTTGCATTAAATCTAAA+TGG | - | chr4.3:5325706-5325725 | MS.gene55744:intron | 30.0% | |
| CATTTAGATTTAATGCAACG+TGG | + | chr4.3:5325708-5325727 | None:intergenic | 30.0% | |
| CCCATAACAATATGATTGTA+AGG | + | chr4.3:5323942-5323961 | None:intergenic | 30.0% | |
| CCCTCATCTATATATTTATC+CGG | - | chr4.3:5324738-5324757 | MS.gene55744:intron | 30.0% | |
| CCCTTACAATCATATTGTTA+TGG | - | chr4.3:5323938-5323957 | MS.gene55744:intron | 30.0% | |
| CCGGATAAATATATAGATGA+GGG | + | chr4.3:5324741-5324760 | None:intergenic | 30.0% | |
| CGAGAATAAAAGAAACATAG+CGG | + | chr4.3:5323423-5323442 | None:intergenic | 30.0% | |
| CGGATAAATATATAGATGAG+GGG | + | chr4.3:5324740-5324759 | None:intergenic | 30.0% | |
| CGGTATTTGTGATACTATTT+GGG | - | chr4.3:5321260-5321279 | MS.gene55744:CDS | 30.0% | |
| CGTTGCATTAAATCTAAATG+GGG | - | chr4.3:5325708-5325727 | MS.gene55744:intron | 30.0% | |
| CTCAAGATTCAAAAAGTTGA+AGG | - | chr4.3:5325194-5325213 | MS.gene55744:intron | 30.0% | |
| GAGTATGTTATCAAATTGTG+TGG | + | chr4.3:5321496-5321515 | None:intergenic | 30.0% | |
| GATACAAGAAAAGAGAAAGA+GGG | - | chr4.3:5321939-5321958 | MS.gene55744:CDS | 30.0% | |
| GATCTAGTAAATGTATGGTA+AGG | + | chr4.3:5322722-5322741 | None:intergenic | 30.0% | |
| GATTCATTTGTTTAAGGGAT+GGG | - | chr4.3:5320979-5320998 | MS.gene55744:intron | 30.0% | |
| GGGCTAAAAAATCAAAAAGT+GGG | - | chr4.3:5325729-5325748 | MS.gene55744:intron | 30.0% | |
| GGTTTAAATAGAGAGTAACA+CGG | - | chr4.3:5321756-5321775 | MS.gene55744:intron | 30.0% | |
| GTAAAAAAACAAGTCAAGTG+AGG | - | chr4.3:5324988-5325007 | MS.gene55744:intron | 30.0% | |
| GTCGTTAAACTTAACTGAAA+TGG | - | chr4.3:5322538-5322557 | MS.gene55744:intron | 30.0% | |
| GTGTCAATAGAATATAGTAC+GGG | + | chr4.3:5322772-5322791 | None:intergenic | 30.0% | |
| GTTAATATGTGCATTCTAAC+TGG | - | chr4.3:5322299-5322318 | MS.gene55744:intron | 30.0% | |
| GTTAGAATGCACATATTAAC+AGG | + | chr4.3:5322299-5322318 | None:intergenic | 30.0% | |
| GTTAGAGACTTATTTGGATT+TGG | + | chr4.3:5322205-5322224 | None:intergenic | 30.0% | |
| GTTCTTTATAACCAGTAACA+TGG | - | chr4.3:5325993-5326012 | MS.gene55744:intron | 30.0% | |
| GTTGCATTAAATCTAAATGG+GGG | - | chr4.3:5325709-5325728 | MS.gene55744:intron | 30.0% | |
| TAAGAAAAAAAAATTGGGGG+GGG | + | chr4.3:5324311-5324330 | None:intergenic | 30.0% | |
| TAATGACCATGTATATGTTC+TGG | + | chr4.3:5322386-5322405 | None:intergenic | 30.0% | |
| TAATGCATCTTCCACAATTT+CGG | + | chr4.3:5322227-5322246 | None:intergenic | 30.0% | |
| TCATGCAATGGAAGTTAAAA+AGG | + | chr4.3:5327166-5327185 | None:intergenic | 30.0% | |
| TCCGGATAAATATATAGATG+AGG | + | chr4.3:5324742-5324761 | None:intergenic | 30.0% | |
| TCGACAACAAAGAATGAAAA+AGG | + | chr4.3:5324632-5324651 | None:intergenic | 30.0% | |
| TCGGTATTTGTGATACTATT+TGG | - | chr4.3:5321259-5321278 | MS.gene55744:CDS | 30.0% | |
| TCTTCAAAATCTTGAAAGTC+AGG | + | chr4.3:5323107-5323126 | None:intergenic | 30.0% | |
| TGTAACACTTGAAGATTAGT+TGG | + | chr4.3:5323374-5323393 | None:intergenic | 30.0% | |
| TTAAAGACAACATGTTCGTA+GGG | - | chr4.3:5324342-5324361 | MS.gene55744:intron | 30.0% | |
| TTGTTATGGGAAAATCATCA+TGG | - | chr4.3:5323952-5323971 | MS.gene55744:intron | 30.0% | |
| TTTAAAGACAACATGTTCGT+AGG | - | chr4.3:5324341-5324360 | MS.gene55744:intron | 30.0% | |
| TTTAATCACTCTTTCGCAAA+AGG | - | chr4.3:5324200-5324219 | MS.gene55744:intron | 30.0% | |
| TTTAGCAATTTCAGATGTAG+AGG | + | chr4.3:5326294-5326313 | None:intergenic | 30.0% | |
| TTTGCGAAAGAGTGATTAAA+TGG | + | chr4.3:5324200-5324219 | None:intergenic | 30.0% | |
| ! | AACTTCTTCAGCTTCATTTT+GGG | + | chr4.3:5326782-5326801 | None:intergenic | 30.0% |
| ! | ACATCTGAAATTGCTAAAAG+TGG | - | chr4.3:5326296-5326315 | MS.gene55744:intron | 30.0% |
| ! | ATTCGAGAAGTACAAAAAGA+TGG | + | chr4.3:5325904-5325923 | None:intergenic | 30.0% |
| ! | CAACTTTTTGAATCTTGAGA+TGG | + | chr4.3:5325193-5325212 | None:intergenic | 30.0% |
| ! | CATCTGAAATTGCTAAAAGT+GGG | - | chr4.3:5326297-5326316 | MS.gene55744:intron | 30.0% |
| ! | GTAACACTTGAAGATTAGTT+GGG | + | chr4.3:5323373-5323392 | None:intergenic | 30.0% |
| ! | GTTTCATTTTCTAACCTGAA+TGG | - | chr4.3:5326525-5326544 | MS.gene55744:intron | 30.0% |
| ! | GTTTCTCAATTGAGTGATTT+TGG | + | chr4.3:5325797-5325816 | None:intergenic | 30.0% |
| ! | TAACACTTGAAGATTAGTTG+GGG | + | chr4.3:5323372-5323391 | None:intergenic | 30.0% |
| ! | TCGGAGAAGTATATAAATGA+GGG | - | chr4.3:5325356-5325375 | MS.gene55744:intron | 30.0% |
| ! | TGATTAGTCACTTTATGTAC+AGG | - | chr4.3:5326878-5326897 | MS.gene55744:intron | 30.0% |
| ! | TGTTTCTTTTATTCTCGTGT+TGG | - | chr4.3:5323426-5323445 | MS.gene55744:intron | 30.0% |
| ! | TTAAATGGGAGTATAAGACT+TGG | + | chr4.3:5323795-5323814 | None:intergenic | 30.0% |
| ! | TTCGGAGAAGTATATAAATG+AGG | - | chr4.3:5325355-5325374 | MS.gene55744:intron | 30.0% |
| !! | AAAAAAAAAATGGTGTTGCG+CGG | - | chr4.3:5322093-5322112 | MS.gene55744:intron | 30.0% |
| !! | AAATCTCTTTGGAATGGATT+TGG | + | chr4.3:5325293-5325312 | None:intergenic | 30.0% |
| !! | GTTTTTGTTATCATCTGCAA+TGG | - | chr4.3:5322439-5322458 | MS.gene55744:intron | 30.0% |
| AAAAATGTCTCCACAAATGG+TGG | + | chr4.3:5326048-5326067 | None:intergenic | 35.0% | |
| AAAGAATGCAAAGGAACTGT+GGG | - | chr4.3:5325473-5325492 | MS.gene55744:intron | 35.0% | |
| AAATCCTTTCCACAACATCT+AGG | - | chr4.3:5324047-5324066 | MS.gene55744:intron | 35.0% | |
| AACGCATTGTGGTATAGATT+AGG | - | chr4.3:5324687-5324706 | MS.gene55744:intron | 35.0% | |
| AAGAAAAAAAAATTGGGGGG+GGG | + | chr4.3:5324310-5324329 | None:intergenic | 35.0% | |
| AAGAAAAGACACTCGAGTTA+CGG | + | chr4.3:5324172-5324191 | None:intergenic | 35.0% | |
| AAGTATGTGCCTTTCAAACT+TGG | - | chr4.3:5326375-5326394 | MS.gene55744:CDS | 35.0% | |
| AATAGAGAGTAACACGGTTA+AGG | - | chr4.3:5321762-5321781 | MS.gene55744:intron | 35.0% | |
| AATTGCTCAACTGAAACTAG+AGG | - | chr4.3:5325769-5325788 | MS.gene55744:intron | 35.0% | |
| ACCTATAGTAGAAAAGATGG+TGG | + | chr4.3:5323345-5323364 | None:intergenic | 35.0% | |
| AGAAAACGAAACAGATGATG+AGG | - | chr4.3:5326718-5326737 | MS.gene55744:CDS | 35.0% | |
| AGAGGTTTGAGTCATTGAAT+CGG | + | chr4.3:5322745-5322764 | None:intergenic | 35.0% | |
| AGATGTTGTGGAAAGGATTT+AGG | + | chr4.3:5324047-5324066 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGA+TGG | + | chr4.3:5323348-5323367 | None:intergenic | 35.0% | |
| AGGAAAAATGTCTCCACAAA+TGG | + | chr4.3:5326051-5326070 | None:intergenic | 35.0% | |
| AGTAGTCAAGGATATGTATG+AGG | + | chr4.3:5324010-5324029 | None:intergenic | 35.0% | |
| AGTTGAAGGGAACACTTTAT+CGG | + | chr4.3:5323504-5323523 | None:intergenic | 35.0% | |
| ATACGCATGCATAAGAATTC+AGG | - | chr4.3:5324478-5324497 | MS.gene55744:intron | 35.0% | |
| ATCGCTCAATTGAAACTATG+GGG | - | chr4.3:5325830-5325849 | MS.gene55744:intron | 35.0% | |
| ATCGGGATCTAGTAAATGTA+TGG | + | chr4.3:5322727-5322746 | None:intergenic | 35.0% | |
| ATTATAATGGTGCACACGTT+GGG | - | chr4.3:5325564-5325583 | MS.gene55744:intron | 35.0% | |
| ATTGCTCAACTGAAACTAGA+GGG | - | chr4.3:5325770-5325789 | MS.gene55744:intron | 35.0% | |
| CACTCAATTGAGAAACTATG+AGG | - | chr4.3:5325801-5325820 | MS.gene55744:intron | 35.0% | |
| CAGCATATACCAAGTTTGAA+AGG | + | chr4.3:5326387-5326406 | None:intergenic | 35.0% | |
| CATCTACAGAAAACACATCT+CGG | - | chr4.3:5323847-5323866 | MS.gene55744:intron | 35.0% | |
| CATGTGTGTTGCAATTCATA+AGG | - | chr4.3:5322469-5322488 | MS.gene55744:intron | 35.0% | |
| CATTGAGGTTAAGGCAATTA+AGG | + | chr4.3:5324514-5324533 | None:intergenic | 35.0% | |
| CGATTCATTTGTTTAAGGGA+TGG | - | chr4.3:5320978-5320997 | MS.gene55744:intron | 35.0% | |
| CTTACTTGAAGCAAAAGGTA+TGG | - | chr4.3:5327000-5327019 | MS.gene55744:intron | 35.0% | |
| GAAGCCATATTTACACTTGA+TGG | - | chr4.3:5322416-5322435 | MS.gene55744:intron | 35.0% | |
| GAATCGCTCAATTGAAACTA+TGG | - | chr4.3:5325828-5325847 | MS.gene55744:intron | 35.0% | |
| GACTTCATCAACATGTTCAT+AGG | - | chr4.3:5324256-5324275 | MS.gene55744:intron | 35.0% | |
| GATGCATTATGCTCTGATAT+TGG | - | chr4.3:5322238-5322257 | MS.gene55744:intron | 35.0% | |
| GGGGCTAAAAAATCAAAAAG+TGG | - | chr4.3:5325728-5325747 | MS.gene55744:intron | 35.0% | |
| GGGTTCATAGTACAAAATGA+TGG | + | chr4.3:5323622-5323641 | None:intergenic | 35.0% | |
| GTAGATGATATAGTCCTACT+CGG | + | chr4.3:5323834-5323853 | None:intergenic | 35.0% | |
| GTAGTCAAGGATATGTATGA+GGG | + | chr4.3:5324009-5324028 | None:intergenic | 35.0% | |
| GTCTTGGCAAAGAAAAACAA+GGG | - | chr4.3:5321014-5321033 | MS.gene55744:intron | 35.0% | |
| GTTATGCTATGCTATGCTTA+GGG | - | chr4.3:5321191-5321210 | MS.gene55744:intron | 35.0% | |
| TAACACCCAGAACATATACA+TGG | - | chr4.3:5322377-5322396 | MS.gene55744:intron | 35.0% | |
| TAACATGCAGTTAAGAAGCT+TGG | + | chr4.3:5322951-5322970 | None:intergenic | 35.0% | |
| TAAGACCGACAATGTTGTAT+GGG | + | chr4.3:5323474-5323493 | None:intergenic | 35.0% | |
| TAAGTACCACACTAGTTGAA+GGG | + | chr4.3:5323517-5323536 | None:intergenic | 35.0% | |
| TAAGTCTCTAACCGAAATTG+TGG | - | chr4.3:5322213-5322232 | MS.gene55744:intron | 35.0% | |
| TACAAGCAAGGTTGTTGAAA+TGG | + | chr4.3:5323570-5323589 | None:intergenic | 35.0% | |
| TAGAGGCAAGACAAAGTATA+TGG | + | chr4.3:5323737-5323756 | None:intergenic | 35.0% | |
| TAGTCAAGGATATGTATGAG+GGG | + | chr4.3:5324008-5324027 | None:intergenic | 35.0% | |
| TATCCTGGAATAGCAATCAA+CGG | + | chr4.3:5326568-5326587 | None:intergenic | 35.0% | |
| TCAAAAAGTGGGTAAATGTG+GGG | - | chr4.3:5325740-5325759 | MS.gene55744:intron | 35.0% | |
| TCAAGATACTGGTAGAACAT+CGG | + | chr4.3:5326480-5326499 | None:intergenic | 35.0% | |
| TCAGTTAAGTTTAACGACGA+AGG | + | chr4.3:5322536-5322555 | None:intergenic | 35.0% | |
| TCCTAGGCATAAAACCAAAT+TGG | - | chr4.3:5324142-5324161 | MS.gene55744:intron | 35.0% | |
| TCTTCAACTTCAAAAGGAGT+AGG | + | chr4.3:5325386-5325405 | None:intergenic | 35.0% | |
| TGAAATTGCTAAAAGTGGGA+TGG | - | chr4.3:5326301-5326320 | MS.gene55744:intron | 35.0% | |
| TGATGTTATACCTGTGTCAT+TGG | + | chr4.3:5321652-5321671 | None:intergenic | 35.0% | |
| TGCAACAGTTTCATTCCTAT+TGG | - | chr4.3:5324377-5324396 | MS.gene55744:intron | 35.0% | |
| TGCCTATATTTGAGTAGTCA+AGG | + | chr4.3:5324022-5324041 | None:intergenic | 35.0% | |
| TGTCTCTCATTATTCCTCAA+AGG | - | chr4.3:5321967-5321986 | MS.gene55744:CDS | 35.0% | |
| TGTTATGCTATGCTATGCTT+AGG | - | chr4.3:5321190-5321209 | MS.gene55744:intron | 35.0% | |
| TTAACGAAGGCAAAGAAGTA+TGG | + | chr4.3:5324852-5324871 | None:intergenic | 35.0% | |
| TTAAGACCGACAATGTTGTA+TGG | + | chr4.3:5323475-5323494 | None:intergenic | 35.0% | |
| TTATGCCTAGGAATCAACAT+TGG | + | chr4.3:5324134-5324153 | None:intergenic | 35.0% | |
| TTCAGTTTCAATGATTCTCC+AGG | + | chr4.3:5326906-5326925 | None:intergenic | 35.0% | |
| TTGTCTATCAATGAGACTGA+TGG | + | chr4.3:5324781-5324800 | None:intergenic | 35.0% | |
| TTTGGATGAACTGTTAACGA+AGG | + | chr4.3:5324865-5324884 | None:intergenic | 35.0% | |
| ! | AAGTTTGAAAGGCACATACT+TGG | + | chr4.3:5326376-5326395 | None:intergenic | 35.0% |
| ! | AATAAGTTTGGGTTTGTCTC+TGG | - | chr4.3:5326233-5326252 | MS.gene55744:CDS | 35.0% |
| ! | AGCAGATTTTAAACCAAGTG+AGG | - | chr4.3:5326807-5326826 | MS.gene55744:intron | 35.0% |
| ! | CAACTTCTTCAGCTTCATTT+TGG | + | chr4.3:5326783-5326802 | None:intergenic | 35.0% |
| ! | CAGAACATTTTACCATGTGA+AGG | + | chr4.3:5325639-5325658 | None:intergenic | 35.0% |
| ! | CATTGCAAATCTCTTTGGAA+TGG | + | chr4.3:5325299-5325318 | None:intergenic | 35.0% |
| ! | CGGAGAAGTATATAAATGAG+GGG | - | chr4.3:5325357-5325376 | MS.gene55744:intron | 35.0% |
| ! | GATCAGTTTTTCCATGTTAC+TGG | + | chr4.3:5326007-5326026 | None:intergenic | 35.0% |
| ! | GGATTTTGTAGTTAAGAGAG+TGG | + | chr4.3:5323285-5323304 | None:intergenic | 35.0% |
| ! | TCCACCATCTTTTCTACTAT+AGG | - | chr4.3:5323341-5323360 | MS.gene55744:intron | 35.0% |
| ! | TGACAATGCTGATGATGAAT+TGG | - | chr4.3:5323067-5323086 | MS.gene55744:intron | 35.0% |
| ! | TGACTTGTCTTCGAAAAAAG+AGG | - | chr4.3:5326971-5326990 | MS.gene55744:intron | 35.0% |
| ! | TGTTGCTTACTTGAAGCAAA+AGG | - | chr4.3:5326995-5327014 | MS.gene55744:intron | 35.0% |
| ! | TTCATTCCTATTGGTTACAG+TGG | + | chr4.3:5325685-5325704 | None:intergenic | 35.0% |
| ! | TTCATTCCTATTGGTTAGAG+TGG | - | chr4.3:5324386-5324405 | MS.gene55744:intron | 35.0% |
| ! | TTTTTCTTACAAAACCCTGC+AGG | + | chr4.3:5326071-5326090 | None:intergenic | 35.0% |
| !! | CAAAGTGATGTTCAAGTTGA+AGG | - | chr4.3:5325541-5325560 | MS.gene55744:intron | 35.0% |
| !! | CAAAGTGATGTTCAAGTTGA+AGG | + | chr4.3:5325560-5325541 | None:intergenic | 35.0% |
| !! | TACTTTGAGATTGCAATCTC+TGG | + | chr4.3:5322571-5322590 | None:intergenic | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+AGG | + | chr4.3:5323337-5323356 | None:intergenic | 35.0% |
| !! | TCTTTAAGATGTCCAGTGAA+TGG | + | chr4.3:5322032-5322051 | None:intergenic | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+AGG | + | chr4.3:5324146-5324165 | None:intergenic | 35.0% |
| AAAAAGTGGGTAAATGTGGG+GGG | - | chr4.3:5325742-5325761 | MS.gene55744:intron | 40.0% | |
| AAACGAAACAGATGATGAGG+TGG | - | chr4.3:5326721-5326740 | MS.gene55744:CDS | 40.0% | |
| AAAGAGTGACATATGTGAGG+AGG | - | chr4.3:5323040-5323059 | MS.gene55744:intron | 40.0% | |
| AAAGCAAGGTCTAGGTATCA+AGG | - | chr4.3:5326601-5326620 | MS.gene55744:intron | 40.0% | |
| AAATCCACAACAGGAAAGCA+AGG | - | chr4.3:5326587-5326606 | MS.gene55744:intron | 40.0% | |
| AACAGAACATTTGACCAAGC+CGG | - | chr4.3:5324452-5324471 | MS.gene55744:intron | 40.0% | |
| AACAGATGATGAGGTGGAAA+TGG | - | chr4.3:5326727-5326746 | MS.gene55744:CDS | 40.0% | |
| AACAGATGCAACTACTTGTC+TGG | - | chr4.3:5324660-5324679 | MS.gene55744:intron | 40.0% | |
| AAGAGTGACATATGTGAGGA+GGG | - | chr4.3:5323041-5323060 | MS.gene55744:intron | 40.0% | |
| AAGCAAGGTTGTTGAAATGG+AGG | + | chr4.3:5323567-5323586 | None:intergenic | 40.0% | |
| AATTCCTTCAAGGTCCTTTG+AGG | + | chr4.3:5321984-5322003 | None:intergenic | 40.0% | |
| ACCAACAAACAAGACACTAC+TGG | - | chr4.3:5321058-5321077 | MS.gene55744:intron | 40.0% | |
| ACGTAATTGAGAGGGATTTC+AGG | + | chr4.3:5320833-5320852 | None:intergenic | 40.0% | |
| AGAAAAAAAAATTGGGGGGG+GGG | + | chr4.3:5324309-5324328 | None:intergenic | 40.0% | |
| AGACATGTCAGTGTAGAAGA+TGG | + | chr4.3:5327286-5327305 | None:intergenic | 40.0% | |
| AGTCAAGGATATGTATGAGG+GGG | + | chr4.3:5324007-5324026 | None:intergenic | 40.0% | |
| AGTCGAGGGAGGAATTAAAT+GGG | + | chr4.3:5323809-5323828 | None:intergenic | 40.0% | |
| ATATAATGGCGCACACATTG+AGG | + | chr4.3:5324529-5324548 | None:intergenic | 40.0% | |
| ATTAGAGAAGCCGAACCAAT+GGG | - | chr4.3:5321461-5321480 | MS.gene55744:CDS | 40.0% | |
| CAAAAAGTGGGTAAATGTGG+GGG | - | chr4.3:5325741-5325760 | MS.gene55744:intron | 40.0% | |
| CAAAGAATGCAAAGGAACTG+TGG | - | chr4.3:5325472-5325491 | MS.gene55744:intron | 40.0% | |
| CAACAATGGAGAATTTAGGG+GGG | - | chr4.3:5325854-5325873 | MS.gene55744:intron | 40.0% | |
| CACATGTTTCATGTTGTGAC+CGG | - | chr4.3:5325496-5325515 | MS.gene55744:intron | 40.0% | |
| CAGGGTACAAAGACATCATT+TGG | - | chr4.3:5326656-5326675 | MS.gene55744:intron | 40.0% | |
| CATCACTTTGCATTGCTCAA+AGG | + | chr4.3:5325531-5325550 | None:intergenic | 40.0% | |
| CCAACAATGGAGAATTTAGG+GGG | - | chr4.3:5325853-5325872 | MS.gene55744:intron | 40.0% | |
| CCTGCATTAACAGTTCTTCA+CGG | + | chr4.3:5325234-5325253 | None:intergenic | 40.0% | |
| CTGCATCTGTTGTGTTAACT+CGG | - | chr4.3:5325446-5325465 | MS.gene55744:intron | 40.0% | |
| CTTGTTTGAACATGCAGAGT+GGG | + | chr4.3:5323978-5323997 | None:intergenic | 40.0% | |
| GAAACTAGGTTTAGGTGGTT+TGG | + | chr4.3:5323323-5323342 | None:intergenic | 40.0% | |
| GAAATCCCTCTCAATTACGT+CGG | - | chr4.3:5320833-5320852 | MS.gene55744:CDS | 40.0% | |
| GAAATGCAAATGGCAGAACA+CGG | + | chr4.3:5326107-5326126 | None:intergenic | 40.0% | |
| GAACCATTTGCTTCATGAGA+CGG | + | chr4.3:5320883-5320902 | None:intergenic | 40.0% | |
| GAATATAGTACGGGTTTGAG+AGG | + | chr4.3:5322763-5322782 | None:intergenic | 40.0% | |
| GAGGTTTGAGTCATTGAATC+GGG | + | chr4.3:5322744-5322763 | None:intergenic | 40.0% | |
| GATAGACAATGCAAGCTCTT+TGG | - | chr4.3:5324792-5324811 | MS.gene55744:intron | 40.0% | |
| GATTATAATGGTGCACACGT+TGG | - | chr4.3:5325563-5325582 | MS.gene55744:intron | 40.0% | |
| GCCAACAATGGAGAATTTAG+GGG | - | chr4.3:5325852-5325871 | MS.gene55744:intron | 40.0% | |
| GCTCAAGATTCAGAAGTTGA+AGG | + | chr4.3:5324901-5324920 | None:intergenic | 40.0% | |
| GGCCAACAATGGAGAATTTA+GGG | - | chr4.3:5325851-5325870 | MS.gene55744:intron | 40.0% | |
| GGTCTTGGCAAAGAAAAACA+AGG | - | chr4.3:5321013-5321032 | MS.gene55744:intron | 40.0% | |
| GTAAGTACCACACTAGTTGA+AGG | + | chr4.3:5323518-5323537 | None:intergenic | 40.0% | |
| GTTTGGACATGAAGAATCTG+TGG | + | chr4.3:5323306-5323325 | None:intergenic | 40.0% | |
| TATTCCTCAAAGGACCTTGA+AGG | - | chr4.3:5321977-5321996 | MS.gene55744:CDS | 40.0% | |
| TCTTCTACACTGACATGTCT+TGG | - | chr4.3:5327286-5327305 | MS.gene55744:intron | 40.0% | |
| TCTTTACATGGCAATGTAGC+AGG | + | chr4.3:5322119-5322138 | None:intergenic | 40.0% | |
| TGCTCCAAGATTCATCTTGT+CGG | - | chr4.3:5324576-5324595 | MS.gene55744:intron | 40.0% | |
| TGGATTTGGCAAATTGTCCA+GGG | + | chr4.3:5322191-5322210 | None:intergenic | 40.0% | |
| TGTAATCTATTTCATGGCCC+TGG | - | chr4.3:5322171-5322190 | MS.gene55744:intron | 40.0% | |
| TGTAGTTAAGAGAGTGGATG+TGG | + | chr4.3:5323279-5323298 | None:intergenic | 40.0% | |
| TTAATGCAGGCAAAGAAGCA+GGG | - | chr4.3:5325244-5325263 | MS.gene55744:intron | 40.0% | |
| TTAGGATCTTCAGCTTCAGA+AGG | - | chr4.3:5324705-5324724 | MS.gene55744:intron | 40.0% | |
| TTATAATGGTGCACACGTTG+GGG | - | chr4.3:5325565-5325584 | MS.gene55744:intron | 40.0% | |
| TTCCAGGATAAATCCACAAC+AGG | - | chr4.3:5326578-5326597 | MS.gene55744:intron | 40.0% | |
| TTCCTGTTGTGGATTTATCC+TGG | + | chr4.3:5326583-5326602 | None:intergenic | 40.0% | |
| TTCTCGAATTTCCCTTGTTG+TGG | - | chr4.3:5325915-5325934 | MS.gene55744:intron | 40.0% | |
| TTGACGTATTTGCCTTCACA+TGG | - | chr4.3:5325624-5325643 | MS.gene55744:intron | 40.0% | |
| TTGCTCAACTGAAACTAGAG+GGG | - | chr4.3:5325771-5325790 | MS.gene55744:intron | 40.0% | |
| TTGGATTTGGCAAATTGTCC+AGG | + | chr4.3:5322192-5322211 | None:intergenic | 40.0% | |
| TTGTTTAAGGGATGGGAAGA+AGG | - | chr4.3:5320986-5321005 | MS.gene55744:intron | 40.0% | |
| TTTCCGTCTCATGAAGCAAA+TGG | - | chr4.3:5320877-5320896 | MS.gene55744:intron | 40.0% | |
| ! | AAAGAAACATAGCGGAGATG+AGG | + | chr4.3:5323415-5323434 | None:intergenic | 40.0% |
| ! | ACAATGCAAGCTCTTTGGAA+TGG | - | chr4.3:5324797-5324816 | MS.gene55744:intron | 40.0% |
| ! | ATACCTGTGTCATTGGATAC+TGG | + | chr4.3:5321645-5321664 | None:intergenic | 40.0% |
| ! | ATAGCATCCAGCTACTTTCT+TGG | + | chr4.3:5326633-5326652 | None:intergenic | 40.0% |
| ! | ATTTGGTGGCAATTGAACTG+GGG | + | chr4.3:5325276-5325295 | None:intergenic | 40.0% |
| ! | CAAGCCTTATCCCATTAAGT+GGG | - | chr4.3:5323209-5323228 | MS.gene55744:intron | 40.0% |
| ! | GATAGGTCCAACCTTTTCAA+GGG | + | chr4.3:5322680-5322699 | None:intergenic | 40.0% |
| ! | GCGAAGCATTTCTAACTTAG+AGG | + | chr4.3:5323695-5323714 | None:intergenic | 40.0% |
| ! | TCTCGAATTTCCCTTGTTGT+GGG | - | chr4.3:5325916-5325935 | MS.gene55744:intron | 40.0% |
| ! | TCTTGTTTGAACATGCAGAG+TGG | + | chr4.3:5323979-5323998 | None:intergenic | 40.0% |
| !! | ACCAGTAGTGTCTTGTTTGT+TGG | + | chr4.3:5321062-5321081 | None:intergenic | 40.0% |
| !! | AGATGGTGGAAACTAGGTTT+AGG | + | chr4.3:5323331-5323350 | None:intergenic | 40.0% |
| !! | AGTCGGAAGTTTTGTATCGA+AGG | - | chr4.3:5327331-5327350 | MS.gene55744:CDS | 40.0% |
| !! | CTCTAAAATGCCACCATTTG+TGG | - | chr4.3:5326035-5326054 | MS.gene55744:intron | 40.0% |
| !! | CTTTAAAATCAGCTGCTCCA+TGG | - | chr4.3:5322601-5322620 | MS.gene55744:intron | 40.0% |
| !! | GATTTGGTGGCAATTGAACT+GGG | + | chr4.3:5325277-5325296 | None:intergenic | 40.0% |
| !! | GTCGGAAGTTTTGTATCGAA+GGG | - | chr4.3:5327332-5327351 | MS.gene55744:CDS | 40.0% |
| !! | TCCATCCAATGTTGATTCCT+AGG | - | chr4.3:5324126-5324145 | MS.gene55744:intron | 40.0% |
| !! | TCTCTTTGGAATGGATTTGG+TGG | + | chr4.3:5325290-5325309 | None:intergenic | 40.0% |
| !! | TCTGGGTGTTATTCCAGATT+CGG | + | chr4.3:5322368-5322387 | None:intergenic | 40.0% |
| !!! | AGTAGCTGGATGCTATTTTC+AGG | - | chr4.3:5326637-5326656 | MS.gene55744:intron | 40.0% |
| !!! | GTAGCTGGATGCTATTTTCA+GGG | - | chr4.3:5326638-5326657 | MS.gene55744:intron | 40.0% |
| AAACGTACAGACCTTCCTTG+TGG | + | chr4.3:5321847-5321866 | None:intergenic | 45.0% | |
| AAGGTCTAGGTATCAAGGAC+AGG | - | chr4.3:5326606-5326625 | MS.gene55744:intron | 45.0% | |
| AATGGAGAATTTAGGGGGGT+GGG | - | chr4.3:5325858-5325877 | MS.gene55744:intron | 45.0% | |
| ACAACAGGAAAGCAAGGTCT+AGG | - | chr4.3:5326593-5326612 | MS.gene55744:intron | 45.0% | |
| ACCGACAATGTTGTATGGGA+CGG | + | chr4.3:5323470-5323489 | None:intergenic | 45.0% | |
| ACTTCAGACACACCATTCAC+TGG | - | chr4.3:5322017-5322036 | MS.gene55744:intron | 45.0% | |
| AGAGAGTAACACGGTTAAGG+TGG | - | chr4.3:5321765-5321784 | MS.gene55744:intron | 45.0% | |
| AGATGATGAGGTGGAAATGG+TGG | - | chr4.3:5326730-5326749 | MS.gene55744:CDS | 45.0% | |
| AGTGCCTAGATGTTGTGGAA+AGG | + | chr4.3:5324054-5324073 | None:intergenic | 45.0% | |
| AGTGTTCCCTTCAACTAGTG+TGG | - | chr4.3:5323508-5323527 | MS.gene55744:intron | 45.0% | |
| ATGTAGCCAGACCCACTTAA+TGG | + | chr4.3:5323223-5323242 | None:intergenic | 45.0% | |
| ATTAAGTGGGTCTGGCTACA+TGG | - | chr4.3:5323222-5323241 | MS.gene55744:intron | 45.0% | |
| CAAGGTTGTTGAAATGGAGG+AGG | + | chr4.3:5323564-5323583 | None:intergenic | 45.0% | |
| CAATGAGACTGATGGAAGAG+CGG | + | chr4.3:5324773-5324792 | None:intergenic | 45.0% | |
| CACGAAAAATAGGCCTCACT+TGG | + | chr4.3:5326823-5326842 | None:intergenic | 45.0% | |
| CAGACCCACTTAATGGGATA+AGG | + | chr4.3:5323216-5323235 | None:intergenic | 45.0% | |
| CCACGTTTGATTACCGAATC+TGG | - | chr4.3:5322352-5322371 | MS.gene55744:intron | 45.0% | |
| CCACTTAATGGGATAAGGCT+TGG | + | chr4.3:5323211-5323230 | None:intergenic | 45.0% | |
| CCCCCTAAATTCTCCATTGT+TGG | + | chr4.3:5325856-5325875 | None:intergenic | 45.0% | |
| CCGTGAAGAACTGTTAATGC+AGG | - | chr4.3:5325231-5325250 | MS.gene55744:intron | 45.0% | |
| CGAGTTACGGCTAACCAATT+TGG | + | chr4.3:5324159-5324178 | None:intergenic | 45.0% | |
| CGTATCACATAGAACACACG+AGG | - | chr4.3:5323537-5323556 | MS.gene55744:intron | 45.0% | |
| CGTTGGGGCTAAAACAGTTA+AGG | - | chr4.3:5325580-5325599 | MS.gene55744:intron | 45.0% | |
| CTCGGCAACAAAGAATGCAA+AGG | - | chr4.3:5325464-5325483 | MS.gene55744:intron | 45.0% | |
| CTTATCCCATTAAGTGGGTC+TGG | - | chr4.3:5323214-5323233 | MS.gene55744:intron | 45.0% | |
| GAAAAAAAAATTGGGGGGGG+GGG | + | chr4.3:5324308-5324327 | None:intergenic | 45.0% | |
| GAAAAGGTTGGACCTATCGT+GGG | - | chr4.3:5322682-5322701 | MS.gene55744:intron | 45.0% | |
| GACTACAATAGACCCACGAT+AGG | + | chr4.3:5322697-5322716 | None:intergenic | 45.0% | |
| GAGTCGAGGGAGGAATTAAA+TGG | + | chr4.3:5323810-5323829 | None:intergenic | 45.0% | |
| GATTAGAGAAGCCGAACCAA+TGG | - | chr4.3:5321460-5321479 | MS.gene55744:CDS | 45.0% | |
| GCAACGTGGTTCATTCCTAT+TGG | + | chr4.3:5325694-5325713 | None:intergenic | 45.0% | |
| GCCTAGGAATCAACATTGGA+TGG | + | chr4.3:5324130-5324149 | None:intergenic | 45.0% | |
| GCGGAAGCAATATGCTTATG+AGG | - | chr4.3:5323762-5323781 | MS.gene55744:intron | 45.0% | |
| GGGCCAACAATGGAGAATTT+AGG | - | chr4.3:5325850-5325869 | MS.gene55744:intron | 45.0% | |
| GTGACCGACAAGATGAATCT+TGG | + | chr4.3:5324583-5324602 | None:intergenic | 45.0% | |
| GTTAATGCAGGCAAAGAAGC+AGG | - | chr4.3:5325243-5325262 | MS.gene55744:intron | 45.0% | |
| TAGACCTTGCTTTCCTGTTG+TGG | + | chr4.3:5326594-5326613 | None:intergenic | 45.0% | |
| TATTGCTTCCGCATGAGTAG+AGG | + | chr4.3:5323754-5323773 | None:intergenic | 45.0% | |
| TCCGTCCCATACAACATTGT+CGG | - | chr4.3:5323466-5323485 | MS.gene55744:intron | 45.0% | |
| TCTTATGCATGCGTATTCGC+CGG | + | chr4.3:5324474-5324493 | None:intergenic | 45.0% | |
| TGAAAAGGTTGGACCTATCG+TGG | - | chr4.3:5322681-5322700 | MS.gene55744:intron | 45.0% | |
| TGAAACTATGGGGCCAACAA+TGG | - | chr4.3:5325840-5325859 | MS.gene55744:intron | 45.0% | |
| TGATATCCATCCAGAGTGGT+GGG | - | chr4.3:5326208-5326227 | MS.gene55744:CDS | 45.0% | |
| TGCTCAAAGGTTCATCTTGC+CGG | + | chr4.3:5325518-5325537 | None:intergenic | 45.0% | |
| TGGTGGAAACTAGGTTTAGG+TGG | + | chr4.3:5323328-5323347 | None:intergenic | 45.0% | |
| TGTAGCCAGACCCACTTAAT+GGG | + | chr4.3:5323222-5323241 | None:intergenic | 45.0% | |
| TTGCTTCATGAGACGGAAAG+CGG | + | chr4.3:5320876-5320895 | None:intergenic | 45.0% | |
| TTGTCTTGCCTCTACTCATG+CGG | - | chr4.3:5323743-5323762 | MS.gene55744:intron | 45.0% | |
| ! | AAGTTTGGGTTTGTCTCTGG+TGG | - | chr4.3:5326236-5326255 | MS.gene55744:CDS | 45.0% |
| ! | AGTGGTGGGGCAATAAGTTT+GGG | - | chr4.3:5326222-5326241 | MS.gene55744:CDS | 45.0% |
| ! | CCAAGCCTTATCCCATTAAG+TGG | - | chr4.3:5323208-5323227 | MS.gene55744:intron | 45.0% |
| ! | CCAGATTCGGTAATCAAACG+TGG | + | chr4.3:5322355-5322374 | None:intergenic | 45.0% |
| ! | CGATAGGTCCAACCTTTTCA+AGG | + | chr4.3:5322681-5322700 | None:intergenic | 45.0% |
| ! | GATAGAGTGCCTAGATGTTG+TGG | + | chr4.3:5324059-5324078 | None:intergenic | 45.0% |
| ! | GGGAGTATAAGACTTGGAGA+CGG | + | chr4.3:5323789-5323808 | None:intergenic | 45.0% |
| ! | GTACCGTTGATTGCTATTCC+AGG | - | chr4.3:5326562-5326581 | MS.gene55744:intron | 45.0% |
| ! | GTGGAGACATTTTTCCTGCA+GGG | - | chr4.3:5326054-5326073 | MS.gene55744:intron | 45.0% |
| ! | GTGTCAAATGCCCATTGGTT+CGG | + | chr4.3:5321474-5321493 | None:intergenic | 45.0% |
| ! | TGTGGAGACATTTTTCCTGC+AGG | - | chr4.3:5326053-5326072 | MS.gene55744:intron | 45.0% |
| !! | CAAGCTCTTTGGAATGGACT+TGG | - | chr4.3:5324803-5324822 | MS.gene55744:intron | 45.0% |
| !! | GGATTTGGTGGCAATTGAAC+TGG | + | chr4.3:5325278-5325297 | None:intergenic | 45.0% |
| !! | TTTGTCTCTGGTGGATTGCT+CGG | - | chr4.3:5326245-5326264 | MS.gene55744:CDS | 45.0% |
| !! | AAAATTAAAGTAAAAAAAAA+GGG | - | chr4.3:5323904-5323923 | MS.gene55744:intron | 5.0% |
| !!! | TTTTCAAAAAAAAAAAAAAA+TGG | - | chr4.3:5322083-5322102 | MS.gene55744:intron | 5.0% |
| AACTTATTGCCCCACCACTC+TGG | + | chr4.3:5326221-5326240 | None:intergenic | 50.0% | |
| AAGGGATGGGAAGAAGGAGA+AGG | - | chr4.3:5320992-5321011 | MS.gene55744:intron | 50.0% | |
| ACAGCAACCTCAGGATCAAC+AGG | + | chr4.3:5321808-5321827 | None:intergenic | 50.0% | |
| ACTATGCGTTGTTGTCCGAC+TGG | - | chr4.3:5325420-5325439 | MS.gene55744:intron | 50.0% | |
| AGTCGGACAACAACGCATAG+TGG | + | chr4.3:5325421-5325440 | None:intergenic | 50.0% | |
| ATGGAGAATTTAGGGGGGTG+GGG | - | chr4.3:5325859-5325878 | MS.gene55744:intron | 50.0% | |
| ATGGCAGAACACGGAAGTAG+AGG | + | chr4.3:5326098-5326117 | None:intergenic | 50.0% | |
| CAACAGATGCAGCTACCAGT+CGG | + | chr4.3:5325438-5325457 | None:intergenic | 50.0% | |
| CAATGGAGAATTTAGGGGGG+TGG | - | chr4.3:5325857-5325876 | MS.gene55744:intron | 50.0% | |
| CACCACTCTGGATGGATATC+AGG | + | chr4.3:5326209-5326228 | None:intergenic | 50.0% | |
| CATGGCGTGATCCTCGAAAA+GGG | - | chr4.3:5322619-5322638 | MS.gene55744:intron | 50.0% | |
| CATGTTCGTAGGGACTGTCA+AGG | - | chr4.3:5324352-5324371 | MS.gene55744:intron | 50.0% | |
| CCATGACGTGTCCCTTGAAA+AGG | - | chr4.3:5322666-5322685 | MS.gene55744:intron | 50.0% | |
| CGAAGGGAAAACAGTGCGAT+TGG | - | chr4.3:5327348-5327367 | MS.gene55744:CDS | 50.0% | |
| CGACACCGACGTAATTGAGA+GGG | + | chr4.3:5320841-5320860 | None:intergenic | 50.0% | |
| CTACCTGTCAGCTGAAGTCA+AGG | + | chr4.3:5327313-5327332 | None:intergenic | 50.0% | |
| CTGATATCCATCCAGAGTGG+TGG | - | chr4.3:5326207-5326226 | MS.gene55744:CDS | 50.0% | |
| CTTGGCGCAACAACTAGACT+TGG | + | chr4.3:5322799-5322818 | None:intergenic | 50.0% | |
| GACAGGACCAAGAAAGTAGC+TGG | - | chr4.3:5326623-5326642 | MS.gene55744:intron | 50.0% | |
| GACGTGTCCCTTGAAAAGGT+TGG | - | chr4.3:5322670-5322689 | MS.gene55744:intron | 50.0% | |
| GACTTCAGCTGACAGGTAGT+CGG | - | chr4.3:5327314-5327333 | MS.gene55744:CDS | 50.0% | |
| GAGCTACTAGACCACAAGGA+AGG | - | chr4.3:5321833-5321852 | MS.gene55744:CDS | 50.0% | |
| GATAGAGCCACCCACAACAA+GGG | + | chr4.3:5325929-5325948 | None:intergenic | 50.0% | |
| GATATCCATCCAGAGTGGTG+GGG | - | chr4.3:5326209-5326228 | MS.gene55744:CDS | 50.0% | |
| GATCCTCGAAAAGGGAAACC+TGG | - | chr4.3:5322627-5322646 | MS.gene55744:intron | 50.0% | |
| GGAGGGAACTTTATGACACC+AGG | + | chr4.3:5322648-5322667 | None:intergenic | 50.0% | |
| GTAACGAGAGAGAGAGAGAG+AGG | + | chr4.3:5320905-5320924 | None:intergenic | 50.0% | |
| GTCCTGATATCCATCCAGAG+TGG | - | chr4.3:5326204-5326223 | MS.gene55744:CDS | 50.0% | |
| TCACTTTATGTACAGGCGCC+TGG | - | chr4.3:5326885-5326904 | MS.gene55744:intron | 50.0% | |
| TCCAGAGCTACTAGACCACA+AGG | - | chr4.3:5321829-5321848 | MS.gene55744:intron | 50.0% | |
| TCCTTGTGGTCTAGTAGCTC+TGG | + | chr4.3:5321833-5321852 | None:intergenic | 50.0% | |
| TGATGAGGTGGAAATGGTGG+TGG | - | chr4.3:5326733-5326752 | MS.gene55744:CDS | 50.0% | |
| TGGCGCACACATTGAGGTTA+AGG | + | chr4.3:5324523-5324542 | None:intergenic | 50.0% | |
| TGGGAAGAAGGAGAAGGTCT+TGG | - | chr4.3:5320998-5321017 | MS.gene55744:intron | 50.0% | |
| TGTCTGGCAACAACGCATTG+TGG | - | chr4.3:5324676-5324695 | MS.gene55744:intron | 50.0% | |
| TGTTGTATGGGACGGAGTGT+TGG | + | chr4.3:5323462-5323481 | None:intergenic | 50.0% | |
| TTCAAGGGACACGTCATGGA+GGG | + | chr4.3:5322665-5322684 | None:intergenic | 50.0% | |
| TTTCAAGGGACACGTCATGG+AGG | + | chr4.3:5322666-5322685 | None:intergenic | 50.0% | |
| ! | ACACCAGGTTTCCCTTTTCG+AGG | + | chr4.3:5322633-5322652 | None:intergenic | 50.0% |
| ! | CGAATTTCCCTTGTTGTGGG+TGG | - | chr4.3:5325919-5325938 | MS.gene55744:intron | 50.0% |
| ! | GAGTGGTGGGGCAATAAGTT+TGG | - | chr4.3:5326221-5326240 | MS.gene55744:CDS | 50.0% |
| ! | GTGTGGTGTCAAATGCCCAT+TGG | + | chr4.3:5321479-5321498 | None:intergenic | 50.0% |
| ! | GTTGTATGGGACGGAGTGTT+GGG | + | chr4.3:5323461-5323480 | None:intergenic | 50.0% |
| !! | CCTTTTCAAGGGACACGTCA+TGG | + | chr4.3:5322669-5322688 | None:intergenic | 50.0% |
| !! | GCTCTTTGGAATGGACTTGG+TGG | - | chr4.3:5324806-5324825 | MS.gene55744:intron | 50.0% |
| !! | GGAAATGGTGGTGGAAAAGG+TGG | - | chr4.3:5326742-5326761 | MS.gene55744:intron | 50.0% |
| !! | GGTGGAAATGGTGGTGGAAA+AGG | - | chr4.3:5326739-5326758 | MS.gene55744:intron | 50.0% |
| !!! | CACATCTCGGTGCTAGCTTT+TGG | - | chr4.3:5323860-5323879 | MS.gene55744:intron | 50.0% |
| AGTCCTACTCGGAGAGTCGA+GGG | + | chr4.3:5323823-5323842 | None:intergenic | 55.0% | |
| ATCAACAGGAACAGCCGCCT+CGG | + | chr4.3:5321794-5321813 | None:intergenic | 55.0% | |
| CACGGTTAAGGTGGAAACCG+AGG | - | chr4.3:5321774-5321793 | MS.gene55744:intron | 55.0% | |
| CCATGGCGTGATCCTCGAAA+AGG | - | chr4.3:5322618-5322637 | MS.gene55744:intron | 55.0% | |
| CGATAGAGCCACCCACAACA+AGG | + | chr4.3:5325930-5325949 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr4.3:5323403-5323422 | None:intergenic | 55.0% | |
| CTTCATGAGACGGAAAGCGG+CGG | + | chr4.3:5320873-5320892 | None:intergenic | 55.0% | |
| GCGACACCGACGTAATTGAG+AGG | + | chr4.3:5320842-5320861 | None:intergenic | 55.0% | |
| GCGCCAGTATCCAATGACAC+AGG | - | chr4.3:5321639-5321658 | MS.gene55744:intron | 55.0% | |
| GGCTGTTCCTGTTGATCCTG+AGG | - | chr4.3:5321798-5321817 | MS.gene55744:intron | 55.0% | |
| GGTCCTTGACTTCAGCTGAC+AGG | - | chr4.3:5327307-5327326 | MS.gene55744:intron | 55.0% | |
| GGTTAAGGTGGAAACCGAGG+CGG | - | chr4.3:5321777-5321796 | MS.gene55744:intron | 55.0% | |
| TAGTCCTACTCGGAGAGTCG+AGG | + | chr4.3:5323824-5323843 | None:intergenic | 55.0% | |
| TATTGCCCCACCACTCTGGA+TGG | + | chr4.3:5326217-5326236 | None:intergenic | 55.0% | |
| TGGAGAATTTAGGGGGGTGG+GGG | - | chr4.3:5325860-5325879 | MS.gene55744:intron | 55.0% | |
| ! | GCTCTGGATACAGCAACCTC+AGG | + | chr4.3:5321817-5321836 | None:intergenic | 55.0% |
| !! | CCTTTTCGAGGATCACGCCA+TGG | + | chr4.3:5322621-5322640 | None:intergenic | 55.0% |
| !! | GGAAGAGCGGATTGCTCATC+CGG | + | chr4.3:5324760-5324779 | None:intergenic | 55.0% |
| !! | TCAATTACGTCGGTGTCGCC+AGG | - | chr4.3:5320843-5320862 | MS.gene55744:CDS | 55.0% |
| GGAGAATTTAGGGGGGTGGG+GGG | - | chr4.3:5325861-5325880 | MS.gene55744:intron | 60.0% | |
| ! | ACGGAAAGCGGCGGATTTCC+TGG | + | chr4.3:5320864-5320883 | None:intergenic | 60.0% |
| ! | TGCATGCGTATTCGCCGGCT+TGG | + | chr4.3:5324469-5324488 | None:intergenic | 60.0% |
| CCTACTCGGAGAGTCGAGGG+AGG | + | chr4.3:5323820-5323839 | None:intergenic | 65.0% | |
| CCTCCCTCGACTCTCCGAGT+AGG | - | chr4.3:5323817-5323836 | MS.gene55744:intron | 65.0% | |
| ! | ATTGGGGGGGGGGGCGTAGT+AGG | + | chr4.3:5324299-5324318 | None:intergenic | 70.0% |
| ! | GGGGGGGGCGTAGTAGGCTT+GGG | + | chr4.3:5324293-5324312 | None:intergenic | 70.0% |
| ! | GGGGGGGGGCGTAGTAGGCT+TGG | + | chr4.3:5324294-5324313 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 5320821 | 5327387 | 5320821 | ID=MS.gene55744 |
| chr4.3 | mRNA | 5320821 | 5327387 | 5320821 | ID=MS.gene55744.t1;Parent=MS.gene55744 |
| chr4.3 | exon | 5327310 | 5327387 | 5327310 | ID=MS.gene55744.t1.exon1;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5327310 | 5327387 | 5327310 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5327129 | 5327213 | 5327129 | ID=MS.gene55744.t1.exon2;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5327129 | 5327213 | 5327129 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5326678 | 5326754 | 5326678 | ID=MS.gene55744.t1.exon3;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5326678 | 5326754 | 5326678 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5326548 | 5326572 | 5326548 | ID=MS.gene55744.t1.exon4;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5326548 | 5326572 | 5326548 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5326354 | 5326441 | 5326354 | ID=MS.gene55744.t1.exon5;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5326354 | 5326441 | 5326354 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5326202 | 5326268 | 5326202 | ID=MS.gene55744.t1.exon6;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5326202 | 5326268 | 5326202 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5325077 | 5325173 | 5325077 | ID=MS.gene55744.t1.exon7;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5325077 | 5325173 | 5325077 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5321832 | 5322013 | 5321832 | ID=MS.gene55744.t1.exon8;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5321832 | 5322013 | 5321832 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5321385 | 5321624 | 5321385 | ID=MS.gene55744.t1.exon9;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5321385 | 5321624 | 5321385 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5321192 | 5321308 | 5321192 | ID=MS.gene55744.t1.exon10;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5321192 | 5321308 | 5321192 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| chr4.3 | exon | 5320821 | 5320886 | 5320821 | ID=MS.gene55744.t1.exon11;Parent=MS.gene55744.t1 |
| chr4.3 | CDS | 5320821 | 5320886 | 5320821 | ID=cds.MS.gene55744.t1;Parent=MS.gene55744.t1 |
| Gene Sequence |
| Protein sequence |
