Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56487.t1 | AES89982.1 | 83.1 | 308 | 30 | 3 | 1 | 294 | 57 | 356 | 2.40E-99 | 372.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56487.t1 | G7JHG5 | 83.1 | 308 | 30 | 3 | 1 | 294 | 57 | 356 | 1.7e-99 | 372.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058909 | MS.gene56487 | 0.82255 | 2.23E-53 | -1.69E-46 |
| MS.gene058912 | MS.gene56487 | 0.818533 | 1.87E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56487.t1 | MTR_4g082910 | 85.065 | 308 | 24 | 3 | 1 | 294 | 57 | 356 | 5.46e-157 | 442 |
| MS.gene56487.t1 | MTR_5g043690 | 45.424 | 295 | 118 | 9 | 3 | 294 | 59 | 313 | 9.78e-49 | 164 |
| MS.gene56487.t1 | MTR_5g043690 | 45.270 | 296 | 119 | 9 | 2 | 294 | 57 | 312 | 1.03e-48 | 164 |
| MS.gene56487.t1 | MTR_3g023650 | 39.815 | 108 | 64 | 1 | 187 | 294 | 126 | 232 | 9.03e-18 | 80.9 |
| MS.gene56487.t1 | MTR_5g043685 | 38.760 | 129 | 61 | 4 | 140 | 268 | 104 | 214 | 6.60e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56487.t1 | AT1G13920 | 50.943 | 106 | 52 | 0 | 189 | 294 | 240 | 345 | 5.23e-29 | 113 |
| MS.gene56487.t1 | AT1G13920 | 50.943 | 106 | 52 | 0 | 189 | 294 | 273 | 378 | 6.03e-29 | 114 |
| MS.gene56487.t1 | AT5G61280 | 28.421 | 190 | 126 | 3 | 107 | 294 | 56 | 237 | 7.97e-14 | 70.1 |
| MS.gene56487.t1 | AT5G61280 | 28.421 | 190 | 126 | 3 | 107 | 294 | 79 | 260 | 1.80e-13 | 69.3 |
| MS.gene56487.t1 | AT1G69325 | 42.342 | 111 | 63 | 1 | 181 | 291 | 10 | 119 | 1.91e-13 | 66.2 |
Find 56 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTTACCTGATAATCTTT+TGG | 0.246925 | 4.4:-30132567 | None:intergenic |
| ATAGGCTTTGCTTCTGGTCT+TGG | 0.265119 | 4.4:-30132507 | None:intergenic |
| GGTTGTGGTGGCGGCGGAGG+TGG | 0.327009 | 4.4:-30133172 | None:intergenic |
| TTTATCATAGGCTTTGCTTC+TGG | 0.328813 | 4.4:-30132513 | None:intergenic |
| TGTGGTGGCGGCGGAGGTGG+TGG | 0.339507 | 4.4:-30133169 | None:intergenic |
| GTTGCACCTGGTCTAGTTGA+TGG | 0.341217 | 4.4:-30133205 | None:intergenic |
| CGGATATCCTAACACCAAAA+AGG | 0.345474 | 4.4:+30133044 | MS.gene56487:CDS |
| GCTGCATCCAAAAGATTATC+AGG | 0.351559 | 4.4:+30132560 | MS.gene56487:CDS |
| GGCGGAGGTGGTGGCGGCTG+CGG | 0.379635 | 4.4:-30133160 | None:intergenic |
| TCTCTAATAGAAGATGTTGT+TGG | 0.380294 | 4.4:-30132920 | None:intergenic |
| TTTGGATGCAGCACCTATAT+GGG | 0.393760 | 4.4:-30132549 | None:intergenic |
| GGAGGTTGTGGTGGCGGCGG+AGG | 0.394059 | 4.4:-30133175 | None:intergenic |
| GCAAACATTATTAGAACAAC+AGG | 0.416708 | 4.4:+30133945 | MS.gene56487:CDS |
| CAGAAGCAAAAGCAGATACT+TGG | 0.418811 | 4.4:+30133227 | MS.gene56487:CDS |
| GTTCTTTCTTTCTTAGAAGC+AGG | 0.419523 | 4.4:-30133988 | None:intergenic |
| CTGACAGGAGGTTGTGGTGG+CGG | 0.433854 | 4.4:-30133181 | None:intergenic |
| TGTTAGAGACAATAGATTCA+TGG | 0.438542 | 4.4:+30133403 | MS.gene56487:CDS |
| AGAACAACAGGAAAGCTTCC+AGG | 0.444025 | 4.4:+30133957 | MS.gene56487:CDS |
| AAATCTTTACCACCAAAACT+TGG | 0.448320 | 4.4:-30133070 | None:intergenic |
| GCGGCCATGAGGACGTGGTT+GGG | 0.450451 | 4.4:-30133141 | None:intergenic |
| AAAGTGAAAATACACGGAAA+AGG | 0.455987 | 4.4:+30133805 | MS.gene56487:CDS |
| ACAGGAGGTTGTGGTGGCGG+CGG | 0.464860 | 4.4:-30133178 | None:intergenic |
| GGTGGCGGCGGAGGTGGTGG+CGG | 0.466003 | 4.4:-30133166 | None:intergenic |
| AAGTGAAAATACACGGAAAA+GGG | 0.489919 | 4.4:+30133806 | MS.gene56487:CDS |
| TAGAAGCAGGAACAAGCCCC+TGG | 0.500961 | 4.4:-30133975 | None:intergenic |
| TGCGGCCATGAGGACGTGGT+TGG | 0.506565 | 4.4:-30133142 | None:intergenic |
| GTTAGAGACAATAGATTCAT+GGG | 0.510246 | 4.4:+30133404 | MS.gene56487:CDS |
| GATGGTCTGACAGGAGGTTG+TGG | 0.513783 | 4.4:-30133187 | None:intergenic |
| GCTTCTGGTCTTGGCCAATG+AGG | 0.527010 | 4.4:-30132498 | None:intergenic |
| GGTCTAGTTGATGGTCTGAC+AGG | 0.535460 | 4.4:-30133196 | None:intergenic |
| AAAAGCAGATACTTGGGAAA+GGG | 0.535761 | 4.4:+30133234 | MS.gene56487:CDS |
| GAACAACAGGAAAGCTTCCA+GGG | 0.544421 | 4.4:+30133958 | MS.gene56487:CDS |
| GGAGTTGCCTGAGACCTCAT+TGG | 0.544976 | 4.4:+30132484 | MS.gene56487:CDS |
| CGGCTGCGGCCATGAGGACG+TGG | 0.549078 | 4.4:-30133146 | None:intergenic |
| GTCTTGGCCAATGAGGTCTC+AGG | 0.549623 | 4.4:-30132491 | None:intergenic |
| CACGGAAAAGGGAGAAAGCA+TGG | 0.551213 | 4.4:+30133817 | MS.gene56487:CDS |
| TTGTCCCAACCACGTCCTCA+TGG | 0.559642 | 4.4:+30133137 | MS.gene56487:CDS |
| TTCCACATGAGCAGAAAATG+TGG | 0.560420 | 4.4:+30132462 | MS.gene56487:CDS |
| AGAAGCAAAAGCAGATACTT+GGG | 0.563207 | 4.4:+30133228 | MS.gene56487:CDS |
| TGATGATGCTGGTGCGAATG+AGG | 0.565873 | 4.4:-30132966 | None:intergenic |
| AACGCTGAAAGCAAAAGATA+AGG | 0.570182 | 4.4:+30133923 | MS.gene56487:CDS |
| CAAAAGCAGATACTTGGGAA+AGG | 0.582056 | 4.4:+30133233 | MS.gene56487:CDS |
| CAATAGATTCATGGGAAAAG+CGG | 0.584674 | 4.4:+30133412 | MS.gene56487:CDS |
| TGCTGCAGCAGCTACTGCTG+TGG | 0.588960 | 4.4:-30132411 | None:intergenic |
| CACAGATGAACAAGGAAACA+AGG | 0.591861 | 4.4:+30132895 | MS.gene56487:CDS |
| TGGTGGCGGCTGCGGCCATG+AGG | 0.604575 | 4.4:-30133152 | None:intergenic |
| TATATAGACGAGATTGCAGA+AGG | 0.610293 | 4.4:+30133864 | MS.gene56487:CDS |
| TTTAAAATCACAGATGAACA+AGG | 0.610365 | 4.4:+30132887 | MS.gene56487:CDS |
| GGTCTGACAGGAGGTTGTGG+TGG | 0.627760 | 4.4:-30133184 | None:intergenic |
| CTAGTTGATGGTCTGACAGG+AGG | 0.633454 | 4.4:-30133193 | None:intergenic |
| GTCAGACCATCAACTAGACC+AGG | 0.640427 | 4.4:+30133199 | MS.gene56487:CDS |
| TGCAGCAAAGTGAAAATACA+CGG | 0.640916 | 4.4:+30133799 | MS.gene56487:intron |
| TCCACATGAGCAGAAAATGT+GGG | 0.644028 | 4.4:+30132463 | MS.gene56487:CDS |
| ACGCAAGCTAAACAAGCATG+AGG | 0.679702 | 4.4:+30133452 | MS.gene56487:CDS |
| TGATGCTGGTGCGAATGAGG+TGG | 0.686427 | 4.4:-30132963 | None:intergenic |
| AACAACAGGAAAGCTTCCAG+GGG | 0.710912 | 4.4:+30133959 | MS.gene56487:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAAAAATAAAAAAA+AGG | - | chr4.4:30132597-30132616 | None:intergenic | 0.0% |
| !!! | AAATGAAGATTTTTTATCAT+AGG | - | chr4.4:30132528-30132547 | None:intergenic | 15.0% |
| !! | AGTTTAATCAGCTTATAATT+AGG | - | chr4.4:30133601-30133620 | None:intergenic | 20.0% |
| !! | GAAAATATAATCAATTTGTC+AGG | + | chr4.4:30133370-30133389 | MS.gene56487:intron | 20.0% |
| !!! | ATATTTACCTGATAATCTTT+TGG | - | chr4.4:30132570-30132589 | None:intergenic | 20.0% |
| !!! | TGATTATGATTTTATGGAAA+TGG | + | chr4.4:30132382-30132401 | MS.gene56487:CDS | 20.0% |
| ! | CTTCTATTAGAGAAGAAAAA+AGG | + | chr4.4:30132930-30132949 | MS.gene56487:CDS | 25.0% |
| ! | GAGAAATGATGATAAAAAAC+CGG | + | chr4.4:30133024-30133043 | MS.gene56487:CDS | 25.0% |
| ! | TGTATTCTTAGGGATAAATT+CGG | + | chr4.4:30132718-30132737 | MS.gene56487:intron | 25.0% |
| ! | TTAACGTTCTTGTATTCTTA+GGG | + | chr4.4:30132708-30132727 | MS.gene56487:intron | 25.0% |
| ! | TTTAACGTTCTTGTATTCTT+AGG | + | chr4.4:30132707-30132726 | MS.gene56487:intron | 25.0% |
| !! | AAATCTTCATTTTCCCATAT+AGG | + | chr4.4:30132536-30132555 | MS.gene56487:CDS | 25.0% |
| !! | GAGTCATGATTATGATTTTA+TGG | + | chr4.4:30132376-30132395 | MS.gene56487:CDS | 25.0% |
| !! | TTTAAAATCACAGATGAACA+AGG | + | chr4.4:30132887-30132906 | MS.gene56487:CDS | 25.0% |
| !!! | TTTGATTTTTCACCAAAAGT+AGG | - | chr4.4:30133004-30133023 | None:intergenic | 25.0% |
| AAAGTGAAAATACACGGAAA+AGG | + | chr4.4:30133805-30133824 | MS.gene56487:CDS | 30.0% | |
| AAATCTTTACCACCAAAACT+TGG | - | chr4.4:30133073-30133092 | None:intergenic | 30.0% | |
| AAGAACGTTAAAAACTCTTG+AGG | - | chr4.4:30132699-30132718 | None:intergenic | 30.0% | |
| AAGTGAAAATACACGGAAAA+GGG | + | chr4.4:30133806-30133825 | MS.gene56487:CDS | 30.0% | |
| AGAACGTTAAAAACTCTTGA+GGG | - | chr4.4:30132698-30132717 | None:intergenic | 30.0% | |
| AGCTCAAAAAGATCAAAGAA+AGG | + | chr4.4:30133260-30133279 | MS.gene56487:CDS | 30.0% | |
| ATTAAAGTGGTTATCCAAAC+AGG | - | chr4.4:30133498-30133517 | None:intergenic | 30.0% | |
| GCAAACATTATTAGAACAAC+AGG | + | chr4.4:30133945-30133964 | MS.gene56487:CDS | 30.0% | |
| GTTAATTCTCTGATAAAGTG+TGG | + | chr4.4:30133760-30133779 | MS.gene56487:intron | 30.0% | |
| GTTAGAGACAATAGATTCAT+GGG | + | chr4.4:30133404-30133423 | MS.gene56487:CDS | 30.0% | |
| TCTCTAATAGAAGATGTTGT+TGG | - | chr4.4:30132923-30132942 | None:intergenic | 30.0% | |
| TGTTAGAGACAATAGATTCA+TGG | + | chr4.4:30133403-30133422 | MS.gene56487:CDS | 30.0% | |
| TTAAAGTGGTTATCCAAACA+GGG | - | chr4.4:30133497-30133516 | None:intergenic | 30.0% | |
| ! | ATGAAAAAGACTCCTACTTT+TGG | + | chr4.4:30132989-30133008 | MS.gene56487:CDS | 30.0% |
| ! | GAGGTTAGATTTTCATATTC+AGG | + | chr4.4:30133471-30133490 | MS.gene56487:intron | 30.0% |
| !!! | GAGAATTAACAAGAGCATTT+TGG | - | chr4.4:30133750-30133769 | None:intergenic | 30.0% |
| !!! | TTGGGACAATTTTTGGTTTT+GGG | - | chr4.4:30133126-30133145 | None:intergenic | 30.0% |
| AAAAGCAGATACTTGGGAAA+GGG | + | chr4.4:30133234-30133253 | MS.gene56487:CDS | 35.0% | |
| AACGCTGAAAGCAAAAGATA+AGG | + | chr4.4:30133923-30133942 | MS.gene56487:CDS | 35.0% | |
| ACTCAATATGCATCACTTGT+AGG | + | chr4.4:30132860-30132879 | MS.gene56487:intron | 35.0% | |
| AGAAGCAAAAGCAGATACTT+GGG | + | chr4.4:30133228-30133247 | MS.gene56487:CDS | 35.0% | |
| CAATAGATTCATGGGAAAAG+CGG | + | chr4.4:30133412-30133431 | MS.gene56487:CDS | 35.0% | |
| TATATAGACGAGATTGCAGA+AGG | + | chr4.4:30133864-30133883 | MS.gene56487:CDS | 35.0% | |
| TGCAGCAAAGTGAAAATACA+CGG | + | chr4.4:30133799-30133818 | MS.gene56487:intron | 35.0% | |
| TTTATCATAGGCTTTGCTTC+TGG | - | chr4.4:30132516-30132535 | None:intergenic | 35.0% | |
| !!! | CTTTTTGGTGTTAGGATATC+CGG | - | chr4.4:30133046-30133065 | None:intergenic | 35.0% |
| !!! | GTCTTTTTCATTGATGATGC+TGG | - | chr4.4:30132980-30132999 | None:intergenic | 35.0% |
| !!! | GTTGGGACAATTTTTGGTTT+TGG | - | chr4.4:30133127-30133146 | None:intergenic | 35.0% |
| !!! | TGGGACAATTTTTGGTTTTG+GGG | - | chr4.4:30133125-30133144 | None:intergenic | 35.0% |
| CAAAAGCAGATACTTGGGAA+AGG | + | chr4.4:30133233-30133252 | MS.gene56487:CDS | 40.0% | |
| CACAGATGAACAAGGAAACA+AGG | + | chr4.4:30132895-30132914 | MS.gene56487:CDS | 40.0% | |
| CAGAAGCAAAAGCAGATACT+TGG | + | chr4.4:30133227-30133246 | MS.gene56487:CDS | 40.0% | |
| CGGATATCCTAACACCAAAA+AGG | + | chr4.4:30133044-30133063 | MS.gene56487:CDS | 40.0% | |
| GCTGCATCCAAAAGATTATC+AGG | + | chr4.4:30132560-30132579 | MS.gene56487:CDS | 40.0% | |
| GTGTAAGCGCTCAATTAAAG+TGG | - | chr4.4:30133511-30133530 | None:intergenic | 40.0% | |
| TCCACATGAGCAGAAAATGT+GGG | + | chr4.4:30132463-30132482 | MS.gene56487:CDS | 40.0% | |
| TTCCACATGAGCAGAAAATG+TGG | + | chr4.4:30132462-30132481 | MS.gene56487:CDS | 40.0% | |
| TTTCATATTCAGGCCCTGTT+TGG | + | chr4.4:30133481-30133500 | MS.gene56487:intron | 40.0% | |
| TTTGGATGCAGCACCTATAT+GGG | - | chr4.4:30132552-30132571 | None:intergenic | 40.0% | |
| ! | CCAAAAAGGACTCCAAGTTT+TGG | + | chr4.4:30133058-30133077 | MS.gene56487:CDS | 40.0% |
| ! | CCAAAACTTGGAGTCCTTTT+TGG | - | chr4.4:30133061-30133080 | None:intergenic | 40.0% |
| ! | TTTTGGATGCAGCACCTATA+TGG | - | chr4.4:30132553-30132572 | None:intergenic | 40.0% |
| !! | AAAAGGACTCCAAGTTTTGG+TGG | + | chr4.4:30133061-30133080 | MS.gene56487:CDS | 40.0% |
| !!! | ATTTTTGGTTTTGGGGTCTC+AGG | - | chr4.4:30133118-30133137 | None:intergenic | 40.0% |
| !!! | TTGGAGTCCTTTTTGGTGTT+AGG | - | chr4.4:30133054-30133073 | None:intergenic | 40.0% |
| AACAACAGGAAAGCTTCCAG+GGG | + | chr4.4:30133959-30133978 | MS.gene56487:CDS | 45.0% | |
| AATTCGGACTCACTACCTCT+TGG | + | chr4.4:30132734-30132753 | MS.gene56487:intron | 45.0% | |
| ACGCAAGCTAAACAAGCATG+AGG | + | chr4.4:30133452-30133471 | MS.gene56487:CDS | 45.0% | |
| AGAACAACAGGAAAGCTTCC+AGG | + | chr4.4:30133957-30133976 | MS.gene56487:CDS | 45.0% | |
| ATAGGCTTTGCTTCTGGTCT+TGG | - | chr4.4:30132510-30132529 | None:intergenic | 45.0% | |
| CAAGTCTCTTTCAGTCCAAG+AGG | - | chr4.4:30132752-30132771 | None:intergenic | 45.0% | |
| GAACAACAGGAAAGCTTCCA+GGG | + | chr4.4:30133958-30133977 | MS.gene56487:CDS | 45.0% | |
| ! | GACGTGGTTGGGACAATTTT+TGG | - | chr4.4:30133133-30133152 | None:intergenic | 45.0% |
| ! | TCCCACATTTTCTGCTCATG+TGG | - | chr4.4:30132467-30132486 | None:intergenic | 45.0% |
| CACGGAAAAGGGAGAAAGCA+TGG | + | chr4.4:30133817-30133836 | MS.gene56487:CDS | 50.0% | |
| CTGAGTAGAACCGCAATGTG+CGG | + | chr4.4:30132663-30132682 | MS.gene56487:intron | 50.0% | |
| GTCAGACCATCAACTAGACC+AGG | + | chr4.4:30133199-30133218 | MS.gene56487:CDS | 50.0% | |
| GTTGCACCTGGTCTAGTTGA+TGG | - | chr4.4:30133208-30133227 | None:intergenic | 50.0% | |
| ! | GCGAATGAGGTGGTCTTTTC+AGG | - | chr4.4:30132956-30132975 | None:intergenic | 50.0% |
| ! | GCTTTTGCTTCTGTTGCACC+TGG | - | chr4.4:30133220-30133239 | None:intergenic | 50.0% |
| ! | TGATGATGCTGGTGCGAATG+AGG | - | chr4.4:30132969-30132988 | None:intergenic | 50.0% |
| !! | CTAGTTGATGGTCTGACAGG+AGG | - | chr4.4:30133196-30133215 | None:intergenic | 50.0% |
| !! | GGTCTAGTTGATGGTCTGAC+AGG | - | chr4.4:30133199-30133218 | None:intergenic | 50.0% |
| GATGGTCTGACAGGAGGTTG+TGG | - | chr4.4:30133190-30133209 | None:intergenic | 55.0% | |
| GGAGTTGCCTGAGACCTCAT+TGG | + | chr4.4:30132484-30132503 | MS.gene56487:CDS | 55.0% | |
| GTCTTGGCCAATGAGGTCTC+AGG | - | chr4.4:30132494-30132513 | None:intergenic | 55.0% | |
| TAGAACCGCAATGTGCGGCA+AGG | + | chr4.4:30132668-30132687 | MS.gene56487:intron | 55.0% | |
| TAGAAGCAGGAACAAGCCCC+TGG | - | chr4.4:30133978-30133997 | None:intergenic | 55.0% | |
| TGATGCTGGTGCGAATGAGG+TGG | - | chr4.4:30132966-30132985 | None:intergenic | 55.0% | |
| TGCGGTTCTACTCAGCTCGA+TGG | - | chr4.4:30132658-30132677 | None:intergenic | 55.0% | |
| TTGTCCCAACCACGTCCTCA+TGG | + | chr4.4:30133137-30133156 | MS.gene56487:CDS | 55.0% | |
| !! | GCTTCTGGTCTTGGCCAATG+AGG | - | chr4.4:30132501-30132520 | None:intergenic | 55.0% |
| CTGACAGGAGGTTGTGGTGG+CGG | - | chr4.4:30133184-30133203 | None:intergenic | 60.0% | |
| GAGAGCCTTGCCGCACATTG+CGG | - | chr4.4:30132676-30132695 | None:intergenic | 60.0% | |
| GGTCTGACAGGAGGTTGTGG+TGG | - | chr4.4:30133187-30133206 | None:intergenic | 60.0% | |
| TGCTGCAGCAGCTACTGCTG+TGG | - | chr4.4:30132414-30132433 | None:intergenic | 60.0% | |
| GCGGCCATGAGGACGTGGTT+GGG | - | chr4.4:30133144-30133163 | None:intergenic | 65.0% | |
| TGCGGCCATGAGGACGTGGT+TGG | - | chr4.4:30133145-30133164 | None:intergenic | 65.0% | |
| !! | ACAGGAGGTTGTGGTGGCGG+CGG | - | chr4.4:30133181-30133200 | None:intergenic | 65.0% |
| CGGCTGCGGCCATGAGGACG+TGG | - | chr4.4:30133149-30133168 | None:intergenic | 75.0% | |
| !! | GGAGGTTGTGGTGGCGGCGG+AGG | - | chr4.4:30133178-30133197 | None:intergenic | 75.0% |
| !! | GGTTGTGGTGGCGGCGGAGG+TGG | - | chr4.4:30133175-30133194 | None:intergenic | 75.0% |
| !! | TGGTGGCGGCTGCGGCCATG+AGG | - | chr4.4:30133155-30133174 | None:intergenic | 75.0% |
| !! | TGTGGTGGCGGCGGAGGTGG+TGG | - | chr4.4:30133172-30133191 | None:intergenic | 75.0% |
| !! | GGTGGCGGCGGAGGTGGTGG+CGG | - | chr4.4:30133169-30133188 | None:intergenic | 80.0% |
| !!! | GGCGGAGGTGGTGGCGGCTG+CGG | - | chr4.4:30133163-30133182 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 30132374 | 30133998 | 30132374 | ID=MS.gene56487 |
| chr4.4 | mRNA | 30132374 | 30133998 | 30132374 | ID=MS.gene56487.t1;Parent=MS.gene56487 |
| chr4.4 | exon | 30132374 | 30132581 | 30132374 | ID=MS.gene56487.t1.exon1;Parent=MS.gene56487.t1 |
| chr4.4 | CDS | 30132374 | 30132581 | 30132374 | ID=cds.MS.gene56487.t1;Parent=MS.gene56487.t1 |
| chr4.4 | exon | 30132882 | 30133281 | 30132882 | ID=MS.gene56487.t1.exon2;Parent=MS.gene56487.t1 |
| chr4.4 | CDS | 30132882 | 30133281 | 30132882 | ID=cds.MS.gene56487.t1;Parent=MS.gene56487.t1 |
| chr4.4 | exon | 30133392 | 30133473 | 30133392 | ID=MS.gene56487.t1.exon3;Parent=MS.gene56487.t1 |
| chr4.4 | CDS | 30133392 | 30133473 | 30133392 | ID=cds.MS.gene56487.t1;Parent=MS.gene56487.t1 |
| chr4.4 | exon | 30133804 | 30133998 | 30133804 | ID=MS.gene56487.t1.exon4;Parent=MS.gene56487.t1 |
| chr4.4 | CDS | 30133804 | 30133998 | 30133804 | ID=cds.MS.gene56487.t1;Parent=MS.gene56487.t1 |
| Gene Sequence |
| Protein sequence |
