Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56507.t1 | XP_013456776.1 | 69 | 290 | 75 | 7 | 1 | 285 | 1 | 280 | 4.90E-73 | 284.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56507.t1 | A0A072UM87 | 69.0 | 290 | 75 | 7 | 1 | 285 | 1 | 280 | 3.5e-73 | 284.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050961 | MS.gene56507 | 0.8042 | 2.42E-49 | -1.69E-46 |
| MS.gene052570 | MS.gene56507 | 0.800849 | 1.19E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56507.t1 | MTR_4g082360 | 65.862 | 290 | 84 | 7 | 1 | 285 | 1 | 280 | 5.22e-106 | 310 |
| MS.gene56507.t1 | MTR_4g082355 | 62.718 | 287 | 102 | 4 | 1 | 285 | 1 | 284 | 7.43e-98 | 289 |
| MS.gene56507.t1 | MTR_4g082365 | 52.857 | 280 | 105 | 4 | 1 | 278 | 1 | 255 | 6.02e-83 | 250 |
| MS.gene56507.t1 | MTR_4g082550 | 32.308 | 325 | 136 | 12 | 4 | 269 | 11 | 310 | 5.72e-23 | 97.1 |
| MS.gene56507.t1 | MTR_4g096890 | 28.571 | 294 | 169 | 13 | 4 | 269 | 12 | 292 | 4.84e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56507.t1 | AT3G11810 | 33.439 | 314 | 166 | 7 | 4 | 275 | 14 | 326 | 4.87e-38 | 137 |
Find 77 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGACGTTTACATGATTT+TGG | 0.176385 | 4.2:-27348602 | MS.gene56507:CDS |
| AGTCCCACTTGTGGTTTATT+TGG | 0.226722 | 4.2:-27348620 | MS.gene56507:CDS |
| TCTAGTCTATTATGGAATTA+AGG | 0.232332 | 4.2:+27348279 | None:intergenic |
| GAAGTTGAAGAAGTGGAATT+TGG | 0.233912 | 4.2:-27348328 | MS.gene56507:CDS |
| AGTTTCCAGCTTCTCCTTAA+TGG | 0.257266 | 4.2:+27348538 | None:intergenic |
| AAATATAACAAAACAAAGTT+AGG | 0.287977 | 4.2:+27348664 | None:intergenic |
| TGGTGGGTGGGTTGTGTTGA+AGG | 0.317375 | 4.2:+27348983 | None:intergenic |
| GTTGGGGTTTGGAACCATTA+AGG | 0.318251 | 4.2:-27348552 | MS.gene56507:CDS |
| GTGGGGTTGGTAATGGTGGG+TGG | 0.324989 | 4.2:+27348970 | None:intergenic |
| CGGCGGAGGTGGCGAGGAGG+GGG | 0.336505 | 4.2:+27348794 | None:intergenic |
| TTTCTCTTTATGTTTCTCAT+TGG | 0.336811 | 4.2:-27348742 | MS.gene56507:CDS |
| TGTGGTGGGGTTGGTAATGG+TGG | 0.370934 | 4.2:+27348966 | None:intergenic |
| CATCGATTAGTGGTTATAGT+TGG | 0.378825 | 4.2:-27348450 | MS.gene56507:CDS |
| AAGTTGAAGAAGTGGAATTT+GGG | 0.381890 | 4.2:-27348327 | MS.gene56507:CDS |
| GGTGGAATCACGTTGGGGTT+TGG | 0.387654 | 4.2:-27348563 | MS.gene56507:CDS |
| AGAGGAAAGAGAGGGGAAGG+AGG | 0.392894 | 4.2:+27349034 | None:intergenic |
| GATTGTGGTGGGGTTGGTAA+TGG | 0.418184 | 4.2:+27348963 | None:intergenic |
| ATTAAGGAGAAGCTGGAAAC+TGG | 0.427521 | 4.2:-27348536 | MS.gene56507:CDS |
| TGTAGTGGTGGAATCACGTT+GGG | 0.429158 | 4.2:-27348569 | MS.gene56507:CDS |
| ATCGATTAGTGGTTATAGTT+GGG | 0.432064 | 4.2:-27348449 | MS.gene56507:CDS |
| TGACGGCGGAGGTGGCGAGG+AGG | 0.433770 | 4.2:+27348791 | None:intergenic |
| ACGGCGGAGGTGGCGAGGAG+GGG | 0.433896 | 4.2:+27348793 | None:intergenic |
| GAGGGGAAGGAGGAAGATGA+GGG | 0.434317 | 4.2:+27349044 | None:intergenic |
| AGAGGGGAAGGAGGAAGATG+AGG | 0.440647 | 4.2:+27349043 | None:intergenic |
| GGTTAGTCATGAAGTCGATA+TGG | 0.441486 | 4.2:+27348686 | None:intergenic |
| TGAGTTGGTAGATGAGGGAG+AGG | 0.444374 | 4.2:+27349016 | None:intergenic |
| TTTGACAGGTTGATTAAAGA+AGG | 0.447665 | 4.2:+27348855 | None:intergenic |
| AGTGAAAGTGACGGCGGAGG+TGG | 0.448228 | 4.2:+27348783 | None:intergenic |
| ATGGCTTCTTTGAGTTTGAC+AGG | 0.455773 | 4.2:+27348841 | None:intergenic |
| TGGGGTTGGTAATGGTGGGT+GGG | 0.463533 | 4.2:+27348971 | None:intergenic |
| GGAAGTGGTGATGGATTTGA+TGG | 0.464194 | 4.2:+27348822 | None:intergenic |
| AGATGAGGGAGAGGAAAGAG+AGG | 0.467128 | 4.2:+27349025 | None:intergenic |
| GGGGAAGAAGGAAGTGGTGA+TGG | 0.469954 | 4.2:+27348813 | None:intergenic |
| GGGAGAGGAAAGAGAGGGGA+AGG | 0.471420 | 4.2:+27349031 | None:intergenic |
| ACATGATGAAGTTGAAGAAG+TGG | 0.477972 | 4.2:-27348335 | MS.gene56507:CDS |
| AGATGGAAGAGGTAAGGAAG+AGG | 0.486051 | 4.2:+27348923 | None:intergenic |
| AAGAGAAGATGGAAGAGGTA+AGG | 0.488350 | 4.2:+27348917 | None:intergenic |
| GACGGCGGAGGTGGCGAGGA+GGG | 0.489494 | 4.2:+27348792 | None:intergenic |
| GGGATGTTGACATCGATTAG+TGG | 0.493411 | 4.2:-27348460 | MS.gene56507:CDS |
| TGGAACCATTAAGGAGAAGC+TGG | 0.500836 | 4.2:-27348543 | MS.gene56507:CDS |
| GATGGCACTATAAGAGAAGA+TGG | 0.501228 | 4.2:+27348906 | None:intergenic |
| TGGAAGAGGTAAGGAAGAGG+AGG | 0.510217 | 4.2:+27348926 | None:intergenic |
| AGTGAAAGCACCGCAAGTAT+AGG | 0.515408 | 4.2:+27348406 | None:intergenic |
| CGTGGTTTCTCCTATACTTG+CGG | 0.518316 | 4.2:-27348416 | MS.gene56507:CDS |
| GGAAGATGAGGGAAAGAGTG+AGG | 0.538897 | 4.2:+27349055 | None:intergenic |
| GTGGTGGGGTTGGTAATGGT+GGG | 0.540006 | 4.2:+27348967 | None:intergenic |
| AGTGGAATTTGGGAAGGAAA+AGG | 0.544513 | 4.2:-27348317 | MS.gene56507:CDS |
| AATATAACAAAACAAAGTTA+GGG | 0.546540 | 4.2:+27348665 | None:intergenic |
| AAAGATGATTGTGGTGGGGT+TGG | 0.549565 | 4.2:+27348957 | None:intergenic |
| GAGCATGAGTTGGTAGATGA+GGG | 0.556437 | 4.2:+27349011 | None:intergenic |
| GAGAGTGAAAGTGACGGCGG+AGG | 0.556656 | 4.2:+27348780 | None:intergenic |
| GATGAGGGAGAGGAAAGAGA+GGG | 0.561976 | 4.2:+27349026 | None:intergenic |
| TGAGCATGAGTTGGTAGATG+AGG | 0.563215 | 4.2:+27349010 | None:intergenic |
| GCTTTCACTTTACAGTATTG+CGG | 0.575903 | 4.2:-27348392 | MS.gene56507:CDS |
| TGAAGAAGTGGAATTTGGGA+AGG | 0.577294 | 4.2:-27348323 | MS.gene56507:CDS |
| ATGAGGGAGAGGAAAGAGAG+GGG | 0.577407 | 4.2:+27349027 | None:intergenic |
| AAGTGACGGCGGAGGTGGCG+AGG | 0.578409 | 4.2:+27348788 | None:intergenic |
| GATTCTTATAGTCCCACTTG+TGG | 0.579316 | 4.2:-27348629 | MS.gene56507:CDS |
| GGTGAAAGTGATTGTAGTGG+TGG | 0.584735 | 4.2:-27348581 | MS.gene56507:CDS |
| ACTATAAGAGAAGATGGAAG+AGG | 0.587360 | 4.2:+27348912 | None:intergenic |
| ACGTCCAAATAAACCACAAG+TGG | 0.588152 | 4.2:+27348616 | None:intergenic |
| AACTGGTGAAAGGAATGAAA+AGG | 0.591857 | 4.2:-27348519 | MS.gene56507:CDS |
| GCTGTAGGTGATGGTGATGA+TGG | 0.593392 | 4.2:+27348888 | None:intergenic |
| GGTGAAAGGAATGAAAAGGT+TGG | 0.594891 | 4.2:-27348515 | MS.gene56507:CDS |
| GAAGGCGTTGTAAACGCTGT+AGG | 0.602360 | 4.2:+27348873 | None:intergenic |
| GAAGGTCTTTGAGCATGAGT+TGG | 0.610047 | 4.2:+27349001 | None:intergenic |
| TTTGGTGAAAGTGATTGTAG+TGG | 0.612338 | 4.2:-27348584 | MS.gene56507:CDS |
| AGAAGCTGGAAACTGGTGAA+AGG | 0.623879 | 4.2:-27348529 | MS.gene56507:CDS |
| GAAAGAGTGAGGTAGTGACC+AGG | 0.630176 | 4.2:+27349066 | None:intergenic |
| GAAGTAGAGAGTGAAAGTGA+CGG | 0.630975 | 4.2:+27348774 | None:intergenic |
| GTCATAATAAATTCTCAACC+TGG | 0.635020 | 4.2:-27349084 | MS.gene56507:CDS |
| GTTGTAAACGCTGTAGGTGA+TGG | 0.651201 | 4.2:+27348879 | None:intergenic |
| TTGTAGTGGTGGAATCACGT+TGG | 0.659689 | 4.2:-27348570 | MS.gene56507:CDS |
| GTAGAGAGTGAAAGTGACGG+CGG | 0.661736 | 4.2:+27348777 | None:intergenic |
| ATTTGGGAAGGAAAAGGACG+AGG | 0.663443 | 4.2:-27348311 | MS.gene56507:CDS |
| CGTCCAAATAAACCACAAGT+GGG | 0.677797 | 4.2:+27348617 | None:intergenic |
| GTAGTGGTGGAATCACGTTG+GGG | 0.688303 | 4.2:-27348568 | MS.gene56507:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATAACAAAACAAAGTT+AGG | + | chr4.2:27348750-27348769 | None:intergenic | 15.0% |
| !! | AATATAACAAAACAAAGTTA+GGG | + | chr4.2:27348749-27348768 | None:intergenic | 15.0% |
| !!! | CTTTTCATCATTTTTATATT+AGG | - | chr4.2:27348702-27348721 | MS.gene56507:CDS | 15.0% |
| !!! | CTTTGTTTTGTTATATTTCA+TGG | - | chr4.2:27348752-27348771 | MS.gene56507:CDS | 20.0% |
| ! | GATAAACAAAAAGATGATTG+TGG | + | chr4.2:27348466-27348485 | None:intergenic | 25.0% |
| ! | TTTCTCTTTATGTTTCTCAT+TGG | - | chr4.2:27348669-27348688 | MS.gene56507:CDS | 25.0% |
| AAACAAAAAGATGATTGTGG+TGG | + | chr4.2:27348463-27348482 | None:intergenic | 30.0% | |
| AACAAAAAGATGATTGTGGT+GGG | + | chr4.2:27348462-27348481 | None:intergenic | 30.0% | |
| AAGTTGAAGAAGTGGAATTT+GGG | - | chr4.2:27349084-27349103 | MS.gene56507:CDS | 30.0% | |
| ATCGATTAGTGGTTATAGTT+GGG | - | chr4.2:27348962-27348981 | MS.gene56507:CDS | 30.0% | |
| GTCATAATAAATTCTCAACC+TGG | - | chr4.2:27348327-27348346 | MS.gene56507:CDS | 30.0% | |
| ! | TTTGGACGTTTACATGATTT+TGG | - | chr4.2:27348809-27348828 | MS.gene56507:CDS | 30.0% |
| !! | TTTGACAGGTTGATTAAAGA+AGG | + | chr4.2:27348559-27348578 | None:intergenic | 30.0% |
| AACTGGTGAAAGGAATGAAA+AGG | - | chr4.2:27348892-27348911 | MS.gene56507:CDS | 35.0% | |
| ACAAAAAGATGATTGTGGTG+GGG | + | chr4.2:27348461-27348480 | None:intergenic | 35.0% | |
| ACATGATGAAGTTGAAGAAG+TGG | - | chr4.2:27349076-27349095 | MS.gene56507:CDS | 35.0% | |
| ACTATAAGAGAAGATGGAAG+AGG | + | chr4.2:27348502-27348521 | None:intergenic | 35.0% | |
| GAAGTTGAAGAAGTGGAATT+TGG | - | chr4.2:27349083-27349102 | MS.gene56507:CDS | 35.0% | |
| GCTTTCACTTTACAGTATTG+CGG | - | chr4.2:27349019-27349038 | MS.gene56507:CDS | 35.0% | |
| TTTGGTGAAAGTGATTGTAG+TGG | - | chr4.2:27348827-27348846 | MS.gene56507:CDS | 35.0% | |
| ! | CATCGATTAGTGGTTATAGT+TGG | - | chr4.2:27348961-27348980 | MS.gene56507:CDS | 35.0% |
| ! | TAGAGAAGATCCCAGATTTT+TGG | + | chr4.2:27348297-27348316 | None:intergenic | 35.0% |
| ! | TAGTTGGGTTATGATTTTCG+TGG | - | chr4.2:27348977-27348996 | MS.gene56507:CDS | 35.0% |
| !!! | GGCTTTTTCAACCTTGTTTT+TGG | - | chr4.2:27348917-27348936 | MS.gene56507:CDS | 35.0% |
| AAGAGAAGATGGAAGAGGTA+AGG | + | chr4.2:27348497-27348516 | None:intergenic | 40.0% | |
| ACGTCCAAATAAACCACAAG+TGG | + | chr4.2:27348798-27348817 | None:intergenic | 40.0% | |
| AGTCCCACTTGTGGTTTATT+TGG | - | chr4.2:27348791-27348810 | MS.gene56507:CDS | 40.0% | |
| AGTGGAATTTGGGAAGGAAA+AGG | - | chr4.2:27349094-27349113 | MS.gene56507:CDS | 40.0% | |
| AGTTTCCAGCTTCTCCTTAA+TGG | + | chr4.2:27348876-27348895 | None:intergenic | 40.0% | |
| ATTAAGGAGAAGCTGGAAAC+TGG | - | chr4.2:27348875-27348894 | MS.gene56507:CDS | 40.0% | |
| CGTCCAAATAAACCACAAGT+GGG | + | chr4.2:27348797-27348816 | None:intergenic | 40.0% | |
| GAAGTAGAGAGTGAAAGTGA+CGG | + | chr4.2:27348640-27348659 | None:intergenic | 40.0% | |
| GATGGCACTATAAGAGAAGA+TGG | + | chr4.2:27348508-27348527 | None:intergenic | 40.0% | |
| GATTCTTATAGTCCCACTTG+TGG | - | chr4.2:27348782-27348801 | MS.gene56507:CDS | 40.0% | |
| GGTGAAAGGAATGAAAAGGT+TGG | - | chr4.2:27348896-27348915 | MS.gene56507:CDS | 40.0% | |
| TGAAGAAGTGGAATTTGGGA+AGG | - | chr4.2:27349088-27349107 | MS.gene56507:CDS | 40.0% | |
| ! | ATGGCTTCTTTGAGTTTGAC+AGG | + | chr4.2:27348573-27348592 | None:intergenic | 40.0% |
| ! | GGTTAGTCATGAAGTCGATA+TGG | + | chr4.2:27348728-27348747 | None:intergenic | 40.0% |
| AGAAGCTGGAAACTGGTGAA+AGG | - | chr4.2:27348882-27348901 | MS.gene56507:CDS | 45.0% | |
| AGATGGAAGAGGTAAGGAAG+AGG | + | chr4.2:27348491-27348510 | None:intergenic | 45.0% | |
| ATTTGGGAAGGAAAAGGACG+AGG | - | chr4.2:27349100-27349119 | MS.gene56507:CDS | 45.0% | |
| CGTGGTTTCTCCTATACTTG+CGG | - | chr4.2:27348995-27349014 | MS.gene56507:CDS | 45.0% | |
| GAAGGTCTTTGAGCATGAGT+TGG | + | chr4.2:27348413-27348432 | None:intergenic | 45.0% | |
| GGTGAAAGTGATTGTAGTGG+TGG | - | chr4.2:27348830-27348849 | MS.gene56507:CDS | 45.0% | |
| GTTGTAAACGCTGTAGGTGA+TGG | + | chr4.2:27348535-27348554 | None:intergenic | 45.0% | |
| TGGAACCATTAAGGAGAAGC+TGG | - | chr4.2:27348868-27348887 | MS.gene56507:CDS | 45.0% | |
| TTGCAACGCAGCCAAAAACA+AGG | + | chr4.2:27348931-27348950 | None:intergenic | 45.0% | |
| ! | AAAGATGATTGTGGTGGGGT+TGG | + | chr4.2:27348457-27348476 | None:intergenic | 45.0% |
| ! | GGGATGTTGACATCGATTAG+TGG | - | chr4.2:27348951-27348970 | MS.gene56507:CDS | 45.0% |
| ! | GTTGGGGTTTGGAACCATTA+AGG | - | chr4.2:27348859-27348878 | MS.gene56507:CDS | 45.0% |
| ! | TGTAGTGGTGGAATCACGTT+GGG | - | chr4.2:27348842-27348861 | MS.gene56507:CDS | 45.0% |
| ! | TTGTAGTGGTGGAATCACGT+TGG | - | chr4.2:27348841-27348860 | MS.gene56507:CDS | 45.0% |
| !! | AGTGAAAGCACCGCAAGTAT+AGG | + | chr4.2:27349008-27349027 | None:intergenic | 45.0% |
| !! | GAGCATGAGTTGGTAGATGA+GGG | + | chr4.2:27348403-27348422 | None:intergenic | 45.0% |
| !! | GGAAGTGGTGATGGATTTGA+TGG | + | chr4.2:27348592-27348611 | None:intergenic | 45.0% |
| !! | TGAGCATGAGTTGGTAGATG+AGG | + | chr4.2:27348404-27348423 | None:intergenic | 45.0% |
| !!! | TGTTTTTGGCTGCGTTGCAA+GGG | - | chr4.2:27348931-27348950 | MS.gene56507:CDS | 45.0% |
| !!! | TTGTTTTTGGCTGCGTTGCA+AGG | - | chr4.2:27348930-27348949 | MS.gene56507:CDS | 45.0% |
| AGATGAGGGAGAGGAAAGAG+AGG | + | chr4.2:27348389-27348408 | None:intergenic | 50.0% | |
| ATGAGGGAGAGGAAAGAGAG+GGG | + | chr4.2:27348387-27348406 | None:intergenic | 50.0% | |
| GAAAGAGTGAGGTAGTGACC+AGG | + | chr4.2:27348348-27348367 | None:intergenic | 50.0% | |
| GATGAGGGAGAGGAAAGAGA+GGG | + | chr4.2:27348388-27348407 | None:intergenic | 50.0% | |
| GGAAGATGAGGGAAAGAGTG+AGG | + | chr4.2:27348359-27348378 | None:intergenic | 50.0% | |
| GTAGAGAGTGAAAGTGACGG+CGG | + | chr4.2:27348637-27348656 | None:intergenic | 50.0% | |
| TGGAAGAGGTAAGGAAGAGG+AGG | + | chr4.2:27348488-27348507 | None:intergenic | 50.0% | |
| ! | GCTGTAGGTGATGGTGATGA+TGG | + | chr4.2:27348526-27348545 | None:intergenic | 50.0% |
| ! | GTAGTGGTGGAATCACGTTG+GGG | - | chr4.2:27348843-27348862 | MS.gene56507:CDS | 50.0% |
| !! | GAAGGCGTTGTAAACGCTGT+AGG | + | chr4.2:27348541-27348560 | None:intergenic | 50.0% |
| !! | GATTGTGGTGGGGTTGGTAA+TGG | + | chr4.2:27348451-27348470 | None:intergenic | 50.0% |
| !! | TGAGTTGGTAGATGAGGGAG+AGG | + | chr4.2:27348398-27348417 | None:intergenic | 50.0% |
| AGAGGAAAGAGAGGGGAAGG+AGG | + | chr4.2:27348380-27348399 | None:intergenic | 55.0% | |
| AGAGGGGAAGGAGGAAGATG+AGG | + | chr4.2:27348371-27348390 | None:intergenic | 55.0% | |
| GAGGGGAAGGAGGAAGATGA+GGG | + | chr4.2:27348370-27348389 | None:intergenic | 55.0% | |
| GGGGAAGAAGGAAGTGGTGA+TGG | + | chr4.2:27348601-27348620 | None:intergenic | 55.0% | |
| GGTGGAATCACGTTGGGGTT+TGG | - | chr4.2:27348848-27348867 | MS.gene56507:CDS | 55.0% | |
| !! | GTGGTGGGGTTGGTAATGGT+GGG | + | chr4.2:27348447-27348466 | None:intergenic | 55.0% |
| !! | TGGGGTTGGTAATGGTGGGT+GGG | + | chr4.2:27348443-27348462 | None:intergenic | 55.0% |
| !! | TGGTGGGTGGGTTGTGTTGA+AGG | + | chr4.2:27348431-27348450 | None:intergenic | 55.0% |
| !! | TGTGGTGGGGTTGGTAATGG+TGG | + | chr4.2:27348448-27348467 | None:intergenic | 55.0% |
| AGTGAAAGTGACGGCGGAGG+TGG | + | chr4.2:27348631-27348650 | None:intergenic | 60.0% | |
| GAGAGTGAAAGTGACGGCGG+AGG | + | chr4.2:27348634-27348653 | None:intergenic | 60.0% | |
| GAGGAGGGGGAAGAAGGAAG+TGG | + | chr4.2:27348607-27348626 | None:intergenic | 60.0% | |
| GGGAGAGGAAAGAGAGGGGA+AGG | + | chr4.2:27348383-27348402 | None:intergenic | 60.0% | |
| !! | GTGGGGTTGGTAATGGTGGG+TGG | + | chr4.2:27348444-27348463 | None:intergenic | 60.0% |
| AAGTGACGGCGGAGGTGGCG+AGG | + | chr4.2:27348626-27348645 | None:intergenic | 70.0% | |
| GGTGGCGAGGAGGGGGAAGA+AGG | + | chr4.2:27348613-27348632 | None:intergenic | 70.0% | |
| ACGGCGGAGGTGGCGAGGAG+GGG | + | chr4.2:27348621-27348640 | None:intergenic | 75.0% | |
| GACGGCGGAGGTGGCGAGGA+GGG | + | chr4.2:27348622-27348641 | None:intergenic | 75.0% | |
| TGACGGCGGAGGTGGCGAGG+AGG | + | chr4.2:27348623-27348642 | None:intergenic | 75.0% | |
| ! | CGGCGGAGGTGGCGAGGAGG+GGG | + | chr4.2:27348620-27348639 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 27348288 | 27349145 | 27348288 | ID=MS.gene56507 |
| chr4.2 | mRNA | 27348288 | 27349145 | 27348288 | ID=MS.gene56507.t1;Parent=MS.gene56507 |
| chr4.2 | exon | 27348288 | 27349145 | 27348288 | ID=MS.gene56507.t1.exon1;Parent=MS.gene56507.t1 |
| chr4.2 | CDS | 27348288 | 27349145 | 27348288 | ID=cds.MS.gene56507.t1;Parent=MS.gene56507.t1 |
| Gene Sequence |
| Protein sequence |