Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56761.t1 | XP_003588461.2 | 89.9 | 286 | 5 | 1 | 1 | 262 | 107 | 392 | 2.10E-134 | 488.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56761.t1 | Q1H5E9 | 74.0 | 289 | 47 | 2 | 1 | 261 | 109 | 397 | 6.7e-110 | 398.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56761.t1 | G7I294 | 89.9 | 286 | 5 | 1 | 1 | 262 | 107 | 392 | 1.5e-134 | 488.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055370 | MS.gene56761 | 0.823733 | 1.18E-53 | -1.69E-46 |
| MS.gene059492 | MS.gene56761 | 0.88139 | 2.50E-70 | -1.69E-46 |
| MS.gene059494 | MS.gene56761 | 0.932584 | 6.84E-95 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56761.t1 | MTR_1g007490 | 89.860 | 286 | 5 | 1 | 1 | 262 | 107 | 392 | 0.0 | 514 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56761.t1 | AT5G48470 | 74.048 | 289 | 47 | 2 | 1 | 261 | 109 | 397 | 5.39e-149 | 422 |
Find 0 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGCATAAAATTAGAAAT+AGG | + | 10789:11590-11609 | None:intergenic | 15.0% |
| !! | AATCTATTACAATCTACATT+TGG | - | 10789:9737-9756 | MS.gene56761:intron | 20.0% |
| !! | AGATTGTAATAGATTATAGT+TGG | + | 10789:9732-9751 | None:intergenic | 20.0% |
| !! | ATATTTATCACTCAATTGAA+AGG | + | 10789:10472-10491 | None:intergenic | 20.0% |
| !! | CCATATAATTGTAAAATACT+TGG | - | 10789:11255-11274 | MS.gene56761:intron | 20.0% |
| !! | GTTATCAAAATAAAACAGTT+TGG | + | 10789:11311-11330 | None:intergenic | 20.0% |
| !!! | AAAAATAGAAAAGTATCAAC+TGG | + | 10789:11425-11444 | None:intergenic | 20.0% |
| !!! | CCAAGTATTTTACAATTATA+TGG | + | 10789:11258-11277 | None:intergenic | 20.0% |
| !!! | TGTGTAGATTTAAAACTAAA+TGG | - | 10789:10798-10817 | MS.gene56761:intron | 20.0% |
| ! | AATAGAAACATTTGTGGATT+TGG | + | 10789:11533-11552 | None:intergenic | 25.0% |
| ! | ACCATTCATCATAAAAACTA+TGG | + | 10789:11207-11226 | None:intergenic | 25.0% |
| ! | AGTTGAAAATTTCACTCTAT+TGG | - | 10789:11281-11300 | MS.gene56761:intron | 25.0% |
| ! | ATATATCAAGAACTGAGTAT+GGG | + | 10789:11339-11358 | None:intergenic | 25.0% |
| ! | GATTAATTGTTTACAGACAA+TGG | - | 10789:10545-10564 | MS.gene56761:CDS | 25.0% |
| ! | GTTGAAAATTTCACTCTATT+GGG | - | 10789:11282-11301 | MS.gene56761:intron | 25.0% |
| ! | TACAATTATATGGAATTCTC+AGG | + | 10789:11248-11267 | None:intergenic | 25.0% |
| ! | TAGAAATAGGTATTTATGAC+AGG | + | 10789:11577-11596 | None:intergenic | 25.0% |
| ! | TATATATCAAGAACTGAGTA+TGG | + | 10789:11340-11359 | None:intergenic | 25.0% |
| ! | TGTATGATAGAGTAATAATC+AGG | + | 10789:11364-11383 | None:intergenic | 25.0% |
| ! | TTAAACAACTGTATGAATGA+AGG | + | 10789:10242-10261 | None:intergenic | 25.0% |
| ! | TTCGAATGAAAAACAAAGTT+TGG | - | 10789:11866-11885 | MS.gene56761:intron | 25.0% |
| ! | TTGAAAATTTCACTCTATTG+GGG | - | 10789:11283-11302 | MS.gene56761:intron | 25.0% |
| ! | TTTGGAAATAGAAACATTTG+TGG | + | 10789:11539-11558 | None:intergenic | 25.0% |
| !!! | ATCTTTTAGGTTCAAGTAAT+TGG | - | 10789:10019-10038 | MS.gene56761:intron | 25.0% |
| !!! | ATTTTGTCGTTTGTGTTAAA+AGG | - | 10789:10753-10772 | MS.gene56761:intron | 25.0% |
| !!! | TGGCTTGTTACTTTATAATA+TGG | + | 10789:11910-11929 | None:intergenic | 25.0% |
| !!! | TTTTGTCGTTTGTGTTAAAA+GGG | - | 10789:10754-10773 | MS.gene56761:intron | 25.0% |
| AAGGATAGAAAAAGTTAACC+AGG | + | 10789:10453-10472 | None:intergenic | 30.0% | |
| ACCGATATTTAATTAGCTCA+CGG | - | 10789:11663-11682 | MS.gene56761:intron | 30.0% | |
| ACTTGAACCTAAAAGATGAA+GGG | + | 10789:10016-10035 | None:intergenic | 30.0% | |
| AGTGGATCATGATGATTTAA+TGG | + | 10789:11930-11949 | None:intergenic | 30.0% | |
| ATATTTAATTAGCTCACGGA+AGG | - | 10789:11667-11686 | MS.gene56761:intron | 30.0% | |
| ATCGAAATATATGCACAGTT+AGG | + | 10789:9838-9857 | None:intergenic | 30.0% | |
| ATGATAAGAAATGTGATGCT+CGG | - | 10789:10930-10949 | MS.gene56761:CDS | 30.0% | |
| ATTATTAAGCTTGGTCTGTT+AGG | + | 10789:9792-9811 | None:intergenic | 30.0% | |
| GAACTTCTTAACTAAATTGG+TGG | - | 10789:10878-10897 | MS.gene56761:intron | 30.0% | |
| GGTGAACTTCTTAACTAAAT+TGG | - | 10789:10875-10894 | MS.gene56761:intron | 30.0% | |
| GTCGCAAAAAAATATGCTTT+CGG | - | 10789:10827-10846 | MS.gene56761:intron | 30.0% | |
| TACTTGAACCTAAAAGATGA+AGG | + | 10789:10017-10036 | None:intergenic | 30.0% | |
| TCCGTGAGCTAATTAAATAT+CGG | + | 10789:11667-11686 | None:intergenic | 30.0% | |
| TGGTATACAACATTACAACT+TGG | + | 10789:9981-10000 | None:intergenic | 30.0% | |
| TTAAAAATCATAAGAGACGC+AGG | + | 10789:11791-11810 | None:intergenic | 30.0% | |
| TTATTAAGCTTGGTCTGTTA+GGG | + | 10789:9791-9810 | None:intergenic | 30.0% | |
| ! | AACAGTGTTTAAAATTCACG+TGG | + | 10789:10524-10543 | None:intergenic | 30.0% |
| ! | AGGTTGTATGCACATTATTT+TGG | + | 10789:11557-11576 | None:intergenic | 30.0% |
| ! | GCCATAGTTTTTATGATGAA+TGG | - | 10789:11203-11222 | MS.gene56761:intron | 30.0% |
| ! | TCATATCTGCTTTCCTTTTT+GGG | + | 10789:10061-10080 | None:intergenic | 30.0% |
| ! | TTCATATCTGCTTTCCTTTT+TGG | + | 10789:10062-10081 | None:intergenic | 30.0% |
| !!! | GATACTTTTCTATTTTTGCC+AGG | - | 10789:11428-11447 | MS.gene56761:CDS | 30.0% |
| AAAAGACAGAAGTCATTCAG+TGG | + | 10789:11948-11967 | None:intergenic | 35.0% | |
| AAGGTCGATCATGTAATCAA+GGG | + | 10789:9605-9624 | None:intergenic | 35.0% | |
| ACTTCTATCAAGTTCTGTAG+AGG | - | 10789:10285-10304 | MS.gene56761:intron | 35.0% | |
| ACTTGAAGATTCATATCCCA+GGG | - | 10789:10131-10150 | MS.gene56761:intron | 35.0% | |
| AGTTAAATGCTATCTCCTGA+AGG | + | 10789:12015-12034 | None:intergenic | 35.0% | |
| ATATATGCTGGATCTGACAA+TGG | - | 10789:11462-11481 | MS.gene56761:CDS | 35.0% | |
| CTATATCTGAATTCTTGCCA+AGG | - | 10789:10495-10514 | MS.gene56761:intron | 35.0% | |
| CTTAAAGAAGTTCCTTACCT+GGG | + | 10789:9929-9948 | None:intergenic | 35.0% | |
| GAATTTACACCTTATCATCC+TGG | + | 10789:9639-9658 | None:intergenic | 35.0% | |
| GAGGTAGAGTATATAATCCA+CGG | + | 10789:10676-10695 | None:intergenic | 35.0% | |
| TAAAATTCACGTGGTTTCCT+TGG | + | 10789:10515-10534 | None:intergenic | 35.0% | |
| TAGAGGTTCTCAATATTGGA+GGG | - | 10789:10302-10321 | MS.gene56761:intron | 35.0% | |
| TCGTTTGTGTTAAAAGGGAT+TGG | - | 10789:10759-10778 | MS.gene56761:intron | 35.0% | |
| TCTAAATGACATAGCTAACC+AGG | - | 10789:10159-10178 | MS.gene56761:intron | 35.0% | |
| TCTATGTAGAACTCCCAAAA+AGG | - | 10789:10045-10064 | MS.gene56761:CDS | 35.0% | |
| TCTGTAGAGGTTCTCAATAT+TGG | - | 10789:10298-10317 | MS.gene56761:intron | 35.0% | |
| TGAGTTGCGATTATTAAGCT+TGG | + | 10789:9801-9820 | None:intergenic | 35.0% | |
| TGGATTATATACTCTACCTC+CGG | - | 10789:10676-10695 | MS.gene56761:intron | 35.0% | |
| TTAAAGAAGTTCCTTACCTG+GGG | + | 10789:9928-9947 | None:intergenic | 35.0% | |
| TTCGGCATCATTAAAACTGT+TGG | - | 10789:10845-10864 | MS.gene56761:intron | 35.0% | |
| ! | ATTTTCCTCTAGGTACAAGT+TGG | + | 10789:11832-11851 | None:intergenic | 35.0% |
| ! | TCAAAACTGCATTTTCCTCT+AGG | + | 10789:11842-11861 | None:intergenic | 35.0% |
| !! | TCAGAAAAGTGTTTGAGAAG+TGG | + | 10789:9952-9971 | None:intergenic | 35.0% |
| AAAGACACTTCAAGTCCTTC+AGG | - | 10789:11997-12016 | MS.gene56761:CDS | 40.0% | |
| ACACTCCATTCCATTTGGAA+AGG | - | 10789:9703-9722 | MS.gene56761:intron | 40.0% | |
| ACTTGTCTGTCATGATATCC+AGG | - | 10789:11105-11124 | MS.gene56761:intron | 40.0% | |
| AGAAGAAGCCGTGATATGAT+GGG | - | 10789:10623-10642 | MS.gene56761:CDS | 40.0% | |
| AGAATCTGAGAAAGTAGCAG+TGG | - | 10789:9516-9535 | MS.gene56761:CDS | 40.0% | |
| ATCAAGGGCCATCATGAAAT+CGG | + | 10789:9590-9609 | None:intergenic | 40.0% | |
| ATTAAAACTGTTGGCAGTGC+AGG | - | 10789:10854-10873 | MS.gene56761:intron | 40.0% | |
| CAAAACCAACTTGTACCTAG+AGG | - | 10789:11824-11843 | MS.gene56761:intron | 40.0% | |
| CAAGGTCGATCATGTAATCA+AGG | + | 10789:9606-9625 | None:intergenic | 40.0% | |
| CATATATACCAGACAAGACC+TGG | + | 10789:11449-11468 | None:intergenic | 40.0% | |
| CCAGGCTGATGATTTATTAG+AGG | - | 10789:10177-10196 | MS.gene56761:intron | 40.0% | |
| CCTCTAATAAATCATCAGCC+TGG | + | 10789:10180-10199 | None:intergenic | 40.0% | |
| CTTGAAGATTCATATCCCAG+GGG | - | 10789:10132-10151 | MS.gene56761:intron | 40.0% | |
| GACTTGAAGATTCATATCCC+AGG | - | 10789:10130-10149 | MS.gene56761:intron | 40.0% | |
| GATATTGCACTTGAAAGACG+CGG | + | 10789:10390-10409 | None:intergenic | 40.0% | |
| GATGGAATCCGATTTCATGA+TGG | - | 10789:9579-9598 | MS.gene56761:intron | 40.0% | |
| GCTTAAAGAAGTTCCTTACC+TGG | + | 10789:9930-9949 | None:intergenic | 40.0% | |
| GTAGAGGTTCTCAATATTGG+AGG | - | 10789:10301-10320 | MS.gene56761:intron | 40.0% | |
| GTCTTGTCTGGTATATATGC+TGG | - | 10789:11450-11469 | MS.gene56761:CDS | 40.0% | |
| GTTTCTCGAAACAGTCTCTA+AGG | - | 10789:11171-11190 | MS.gene56761:intron | 40.0% | |
| TAGTTGGAGACCTTTCCAAA+TGG | + | 10789:9716-9735 | None:intergenic | 40.0% | |
| TGAACCTAAAAGATGAAGGG+AGG | + | 10789:10013-10032 | None:intergenic | 40.0% | |
| TTGGATGAAAGAAATGACCG+TGG | - | 10789:10656-10675 | MS.gene56761:intron | 40.0% | |
| TTTCCAAATGGAATGGAGTG+TGG | + | 10789:9704-9723 | None:intergenic | 40.0% | |
| TTTGATGAACCTGCAAGCAA+AGG | + | 10789:11979-11998 | None:intergenic | 40.0% | |
| ! | AAATTGGTGGCCTTAAAACC+TGG | - | 10789:10891-10910 | MS.gene56761:intron | 40.0% |
| ! | AACTCCTCCCTTCATCTTTT+AGG | - | 10789:10006-10025 | MS.gene56761:intron | 40.0% |
| ! | AATTGGTGGCCTTAAAACCT+GGG | - | 10789:10892-10911 | MS.gene56761:intron | 40.0% |
| ! | ATGTCATTTAGATTTGCCCC+TGG | + | 10789:10151-10170 | None:intergenic | 40.0% |
| ! | CACAACTTTCCCAGGTTTTA+AGG | + | 10789:10904-10923 | None:intergenic | 40.0% |
| ! | TGGTAAGAGAGTTGATCAGA+TGG | - | 10789:9561-9580 | MS.gene56761:intron | 40.0% |
| ! | TGTCATTTAGATTTGCCCCT+GGG | + | 10789:10150-10169 | None:intergenic | 40.0% |
| !! | CAGAAGCTTTCTAAAATGCC+TGG | - | 10789:10432-10451 | MS.gene56761:intron | 40.0% |
| !! | CAGGCATTTTAGAAAGCTTC+TGG | + | 10789:10434-10453 | None:intergenic | 40.0% |
| !! | TATTTTTGCCAGGTCTTGTC+TGG | - | 10789:11438-11457 | MS.gene56761:CDS | 40.0% |
| !! | TTCAGTAGGATTTGCTGGAA+GGG | - | 10789:11001-11020 | MS.gene56761:intron | 40.0% |
| !! | TTTCAGTAGGATTTGCTGGA+AGG | - | 10789:11000-11019 | MS.gene56761:intron | 40.0% |
| !!! | CTCTAGGTACAAGTTGGTTT+TGG | + | 10789:11826-11845 | None:intergenic | 40.0% |
| !!! | TAGGTACAAGTTGGTTTTGG+TGG | + | 10789:11823-11842 | None:intergenic | 40.0% |
| AAAACCTGGGAAAGTTGTGC+TGG | - | 10789:10905-10924 | MS.gene56761:CDS | 45.0% | |
| AACTAAAAAATGCCCACCCC+AGG | - | 10789:9909-9928 | MS.gene56761:intron | 45.0% | |
| ACTGTTTCGAGAAACATGCC+CGG | + | 10789:11166-11185 | None:intergenic | 45.0% | |
| AGGGTTTCAGTAGGATTTGC+TGG | - | 10789:10996-11015 | MS.gene56761:intron | 45.0% | |
| ATATCCAGCACAACTTTCCC+AGG | + | 10789:10912-10931 | None:intergenic | 45.0% | |
| ATGAAGGGAGGAGTTCACAT+TGG | + | 10789:10001-10020 | None:intergenic | 45.0% | |
| CAGATCGAAAACTGCTTGCA+AGG | - | 10789:10586-10605 | MS.gene56761:CDS | 45.0% | |
| CATCCACACTCCATTCCATT+TGG | - | 10789:9698-9717 | MS.gene56761:intron | 45.0% | |
| GAGAAGAAGCCGTGATATGA+TGG | - | 10789:10622-10641 | MS.gene56761:CDS | 45.0% | |
| GATGATGACAGGGTTTCAGT+AGG | - | 10789:10987-11006 | MS.gene56761:intron | 45.0% | |
| GGAGACCTTTCCAAATGGAA+TGG | + | 10789:9711-9730 | None:intergenic | 45.0% | |
| GTGATGCTCGGAAAAGATGA+AGG | - | 10789:10942-10961 | MS.gene56761:CDS | 45.0% | |
| TCACATCAACATACCTCAGC+CGG | + | 10789:10698-10717 | None:intergenic | 45.0% | |
| TCACTGCACAACATCTGGAA+TGG | - | 10789:11487-11506 | MS.gene56761:intron | 45.0% | |
| TGAACCTGCAAGCAAAGGAA+AGG | + | 10789:11974-11993 | None:intergenic | 45.0% | |
| TGAGAAAGTAGCAGTGGAGT+TGG | - | 10789:9522-9541 | MS.gene56761:intron | 45.0% | |
| TGAGAAGGACCAGGATGATA+AGG | - | 10789:9627-9646 | MS.gene56761:intron | 45.0% | |
| TGGTATCACTGCACAACATC+TGG | - | 10789:11482-11501 | MS.gene56761:CDS | 45.0% | |
| TGTTCCTTTCCTTTGCTTGC+AGG | - | 10789:11967-11986 | MS.gene56761:CDS | 45.0% | |
| TTAGCTCACGGAAGGTAACT+AGG | - | 10789:11675-11694 | MS.gene56761:intron | 45.0% | |
| TTGGCTGCACAAGGAGTTAT+TGG | - | 10789:9541-9560 | MS.gene56761:intron | 45.0% | |
| ! | AGTTTTCGATCTGGCACAAC+AGG | + | 10789:10579-10598 | None:intergenic | 45.0% |
| ! | CACTGCACAACATCTGGAAT+GGG | - | 10789:11488-11507 | MS.gene56761:intron | 45.0% |
| ! | CTTGCAAGCAGTTTTCGATC+TGG | + | 10789:10588-10607 | None:intergenic | 45.0% |
| ! | TCAACTGGAAGTGCAAACAC+AGG | + | 10789:11410-11429 | None:intergenic | 45.0% |
| ! | TGGCAACGATGATGATGACA+GGG | - | 10789:10977-10996 | MS.gene56761:intron | 45.0% |
| !! | GCTGGTGGCGGTTTATTTAA+AGG | - | 10789:10100-10119 | MS.gene56761:intron | 45.0% |
| AAAAATGCCCACCCCAGGTA+AGG | - | 10789:9914-9933 | MS.gene56761:intron | 50.0% | |
| AAGAAGTTCCTTACCTGGGG+TGG | + | 10789:9925-9944 | None:intergenic | 50.0% | |
| AGAAGTTCCTTACCTGGGGT+GGG | + | 10789:9924-9943 | None:intergenic | 50.0% | |
| AGTGCAAACACAGGCAGAGA+AGG | + | 10789:11401-11420 | None:intergenic | 50.0% | |
| ATATACTCTACCTCCGGCTG+AGG | - | 10789:10682-10701 | MS.gene56761:intron | 50.0% | |
| ATCGCAACTCACACACATGC+TGG | - | 10789:9810-9829 | MS.gene56761:intron | 50.0% | |
| CATGATCGACCTTGCTGAGA+AGG | - | 10789:9612-9631 | MS.gene56761:intron | 50.0% | |
| CTGTTTCGAGAAACATGCCC+GGG | + | 10789:11165-11184 | None:intergenic | 50.0% | |
| GATATCCAGGCAAGTGTGAC+AGG | - | 10789:11118-11137 | MS.gene56761:intron | 50.0% | |
| GTGAGTCGAATTGGATGACG+TGG | - | 10789:11023-11042 | MS.gene56761:intron | 50.0% | |
| TCGCAACTCACACACATGCT+GGG | - | 10789:9811-9830 | MS.gene56761:intron | 50.0% | |
| ! | AAGCCGTGATATGATGGGAG+GGG | - | 10789:10628-10647 | MS.gene56761:CDS | 50.0% |
| ! | AGAAGCCGTGATATGATGGG+AGG | - | 10789:10626-10645 | MS.gene56761:CDS | 50.0% |
| ! | CTGGCAACGATGATGATGAC+AGG | - | 10789:10976-10995 | MS.gene56761:intron | 50.0% |
| ! | GAAGCCGTGATATGATGGGA+GGG | - | 10789:10627-10646 | MS.gene56761:CDS | 50.0% |
| ! | GATGAAGGTGCAGACAACAC+TGG | - | 10789:10957-10976 | MS.gene56761:intron | 50.0% |
| !! | TATGATGGGAGGGGGGATTT+TGG | - | 10789:10637-10656 | MS.gene56761:intron | 50.0% |
| !!! | AGTTGGTTTTGGTGGCAACG+TGG | + | 10789:11815-11834 | None:intergenic | 50.0% |
| CATCAACATACCTCAGCCGG+AGG | + | 10789:10695-10714 | None:intergenic | 55.0% | |
| CATCCTGGTCCTTCTCAGCA+AGG | + | 10789:9624-9643 | None:intergenic | 55.0% | |
| GATGCAGCGCAAGTCACTGT+TGG | - | 10789:9855-9874 | MS.gene56761:intron | 55.0% | |
| GCTGGAAGGGTGAGTCGAAT+TGG | - | 10789:11014-11033 | MS.gene56761:intron | 55.0% | |
| TCCAGGCAAGTGTGACAGGA+CGG | - | 10789:11122-11141 | MS.gene56761:intron | 55.0% | |
| TCCCCCCTCCCATCATATCA+CGG | + | 10789:10634-10653 | None:intergenic | 55.0% | |
| TTGTTACGCCGAGTTGCAGC+TGG | - | 10789:10082-10101 | MS.gene56761:intron | 55.0% | |
| ! | AGCCGTGATATGATGGGAGG+GGG | - | 10789:10629-10648 | MS.gene56761:CDS | 55.0% |
| AACCGCCACCAGCTGCAACT+CGG | + | 10789:10093-10112 | None:intergenic | 60.0% | |
| AGAAACATGCCCGGGCGTAC+GGG | + | 10789:11157-11176 | None:intergenic | 60.0% | |
| CGACCTTGCTGAGAAGGACC+AGG | - | 10789:9618-9637 | MS.gene56761:intron | 60.0% | |
| GAGAAACATGCCCGGGCGTA+CGG | + | 10789:11158-11177 | None:intergenic | 60.0% | |
| GCAGTGGAGTTGGCTGCACA+AGG | - | 10789:9532-9551 | MS.gene56761:intron | 60.0% | |
| TCCGTCCTGTCACACTTGCC+TGG | + | 10789:11126-11145 | None:intergenic | 60.0% | |
| TTACGCCGAGTTGCAGCTGG+TGG | - | 10789:10085-10104 | MS.gene56761:intron | 60.0% | |
| ! | GCCGTGATATGATGGGAGGG+GGG | - | 10789:10630-10649 | MS.gene56761:CDS | 60.0% |
| AAGCCACATCCCGTACGCCC+GGG | - | 10789:11145-11164 | MS.gene56761:intron | 65.0% | |
| GAAGCCACATCCCGTACGCC+CGG | - | 10789:11144-11163 | MS.gene56761:intron | 65.0% | |
| ATGCCCGGGCGTACGGGATG+TGG | + | 10789:11151-11170 | None:intergenic | 70.0% | |
| CGCCGAGTTGCAGCTGGTGG+CGG | - | 10789:10088-10107 | MS.gene56761:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10789 | gene | 9493 | 12036 | 9493 | ID=MS.gene56761 |
| 10789 | mRNA | 9493 | 12036 | 9493 | ID=MS.gene56761.t1;Parent=MS.gene56761 |
| 10789 | exon | 11881 | 12036 | 11881 | ID=MS.gene56761.t1.exon1;Parent=MS.gene56761.t1 |
| 10789 | CDS | 11881 | 12036 | 11881 | ID=cds.MS.gene56761.t1;Parent=MS.gene56761.t1 |
| 10789 | exon | 11599 | 11667 | 11599 | ID=MS.gene56761.t1.exon2;Parent=MS.gene56761.t1 |
| 10789 | CDS | 11599 | 11667 | 11599 | ID=cds.MS.gene56761.t1;Parent=MS.gene56761.t1 |
| 10789 | exon | 11331 | 11501 | 11331 | ID=MS.gene56761.t1.exon3;Parent=MS.gene56761.t1 |
| 10789 | CDS | 11331 | 11501 | 11331 | ID=cds.MS.gene56761.t1;Parent=MS.gene56761.t1 |
| 10789 | exon | 10897 | 10968 | 10897 | ID=MS.gene56761.t1.exon4;Parent=MS.gene56761.t1 |
| 10789 | CDS | 10897 | 10968 | 10897 | ID=cds.MS.gene56761.t1;Parent=MS.gene56761.t1 |
| 10789 | exon | 10507 | 10653 | 10507 | ID=MS.gene56761.t1.exon5;Parent=MS.gene56761.t1 |
| 10789 | CDS | 10507 | 10653 | 10507 | ID=cds.MS.gene56761.t1;Parent=MS.gene56761.t1 |
| 10789 | exon | 10337 | 10402 | 10337 | ID=MS.gene56761.t1.exon6;Parent=MS.gene56761.t1 |
| 10789 | CDS | 10337 | 10402 | 10337 | ID=cds.MS.gene56761.t1;Parent=MS.gene56761.t1 |
| 10789 | exon | 10020 | 10079 | 10020 | ID=MS.gene56761.t1.exon7;Parent=MS.gene56761.t1 |
| 10789 | CDS | 10020 | 10079 | 10020 | ID=cds.MS.gene56761.t1;Parent=MS.gene56761.t1 |
| 10789 | exon | 9493 | 9540 | 9493 | ID=MS.gene56761.t1.exon8;Parent=MS.gene56761.t1 |
| 10789 | CDS | 9493 | 9540 | 9493 | ID=cds.MS.gene56761.t1;Parent=MS.gene56761.t1 |
| Gene Sequence |
| Protein sequence |
