Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059492.t1 | XP_003588461.2 | 77.3 | 304 | 45 | 3 | 1 | 298 | 107 | 392 | 4.40E-117 | 431 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059492.t1 | Q1H5E9 | 62.5 | 307 | 87 | 4 | 1 | 297 | 109 | 397 | 9.4e-92 | 338.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059492.t1 | G7I294 | 77.3 | 304 | 45 | 3 | 1 | 298 | 107 | 392 | 3.2e-117 | 431.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059492 | MS.gene059494 | 0.938927 | 2.99E-99 | -1.69E-46 |
| MS.gene059492 | MS.gene56719 | 0.814093 | 1.84E-51 | -1.69E-46 |
| MS.gene059492 | MS.gene56721 | 0.825791 | 3.87E-54 | -1.69E-46 |
| MS.gene059492 | MS.gene56759 | 0.869701 | 2.54E-66 | -1.69E-46 |
| MS.gene059492 | MS.gene56761 | 0.88139 | 2.50E-70 | -1.69E-46 |
| MS.gene059492 | MS.gene56763 | 0.844079 | 9.44E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059492.t1 | MTR_1g007490 | 77.303 | 304 | 45 | 3 | 1 | 298 | 107 | 392 | 3.73e-161 | 454 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059492.t1 | AT5G48470 | 62.541 | 307 | 87 | 4 | 1 | 297 | 109 | 397 | 1.08e-123 | 359 |
Find 0 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATGCATAAAATTAGAAAT+AGG | + | 10787:15725-15744 | MS.gene059492:intergenic | 15.0% |
| !! | AATCTATTACAATCTACATT+TGG | - | 10787:13873-13892 | MS.gene059492:intron | 20.0% |
| !! | AGATTGTAATAGATTATAGT+TGG | + | 10787:13868-13887 | MS.gene059492:intergenic | 20.0% |
| !! | ATATTTATCACTCAATTGAA+AGG | + | 10787:14607-14626 | MS.gene059492:intergenic | 20.0% |
| !! | CCATATAATTGTAAAATACT+TGG | - | 10787:15390-15409 | MS.gene059492:intron | 20.0% |
| !! | GTTATCAAAATAAAACAGTT+TGG | + | 10787:15446-15465 | MS.gene059492:intergenic | 20.0% |
| !! | TTAATGATTAAACAACTGTA+TGG | + | 10787:14385-14404 | MS.gene059492:intergenic | 20.0% |
| !!! | AAAAATAGAAAAGTATCAAC+TGG | + | 10787:15560-15579 | MS.gene059492:intergenic | 20.0% |
| !!! | CCAAGTATTTTACAATTATA+TGG | + | 10787:15393-15412 | MS.gene059492:intergenic | 20.0% |
| !!! | TGTGTAGATTTAAAACTAAA+TGG | - | 10787:14933-14952 | MS.gene059492:intron | 20.0% |
| ! | AATAGAAACATTTGTGGATT+TGG | + | 10787:15668-15687 | MS.gene059492:intergenic | 25.0% |
| ! | ACCATTCATCATAAAAACTA+TGG | + | 10787:15342-15361 | MS.gene059492:intergenic | 25.0% |
| ! | AGTTGAAAATTTCACTCTAT+TGG | - | 10787:15416-15435 | MS.gene059492:intron | 25.0% |
| ! | ATATATCAAGAACTGAGTAT+GGG | + | 10787:15474-15493 | MS.gene059492:intergenic | 25.0% |
| ! | GATTAATTGTTTACAGACAA+TGG | - | 10787:14680-14699 | MS.gene059492:CDS | 25.0% |
| ! | GTTGAAAATTTCACTCTATT+GGG | - | 10787:15417-15436 | MS.gene059492:intron | 25.0% |
| ! | TACAATTATATGGAATTCTC+AGG | + | 10787:15383-15402 | MS.gene059492:intergenic | 25.0% |
| ! | TAGAAATAGGTATTTATGAC+AGG | + | 10787:15712-15731 | MS.gene059492:intergenic | 25.0% |
| ! | TATATATCAAGAACTGAGTA+TGG | + | 10787:15475-15494 | MS.gene059492:intergenic | 25.0% |
| ! | TGTATGATAGAGTAATAATC+AGG | + | 10787:15499-15518 | MS.gene059492:intergenic | 25.0% |
| ! | TTCGAATGAAAAACAAAGTT+TGG | - | 10787:16000-16019 | MS.gene059492:intron | 25.0% |
| ! | TTGAAAATTTCACTCTATTG+GGG | - | 10787:15418-15437 | MS.gene059492:intron | 25.0% |
| ! | TTTGGAAATAGAAACATTTG+TGG | + | 10787:15674-15693 | MS.gene059492:intergenic | 25.0% |
| !!! | ATCTTTTAGGTTCAAGTAAT+TGG | - | 10787:14154-14173 | MS.gene059492:intron | 25.0% |
| !!! | ATTTTGTCGTTTGTGTTAAA+AGG | - | 10787:14888-14907 | MS.gene059492:intron | 25.0% |
| !!! | TGGCTTGTTACTTTATAATA+TGG | + | 10787:16044-16063 | MS.gene059492:intergenic | 25.0% |
| !!! | TTTTGTCGTTTGTGTTAAAA+GGG | - | 10787:14889-14908 | MS.gene059492:intron | 25.0% |
| AAGGATAGAAAAAGTTAACC+AGG | + | 10787:14588-14607 | MS.gene059492:intergenic | 30.0% | |
| ACCGATATTTAATTAGCTCA+CGG | - | 10787:15798-15817 | MS.gene059492:intron | 30.0% | |
| ACTTGAACCTAAAAGATGAA+GGG | + | 10787:14151-14170 | MS.gene059492:intergenic | 30.0% | |
| AGTGGATCATGATGATTTAA+TGG | + | 10787:16064-16083 | MS.gene059492:intergenic | 30.0% | |
| ATATTTAATTAGCTCACGGA+AGG | - | 10787:15802-15821 | MS.gene059492:intron | 30.0% | |
| ATCGAAATATATGCACAGTT+AGG | + | 10787:13974-13993 | MS.gene059492:intergenic | 30.0% | |
| ATGATAAGAAATGTGATGCT+CGG | - | 10787:15065-15084 | MS.gene059492:CDS | 30.0% | |
| ATTATTAAGCTTGGTCTGTT+AGG | + | 10787:13928-13947 | MS.gene059492:intergenic | 30.0% | |
| GAACTTCTTAACTAAATTGG+TGG | - | 10787:15013-15032 | MS.gene059492:CDS | 30.0% | |
| GGTGAACTTCTTAACTAAAT+TGG | - | 10787:15010-15029 | MS.gene059492:CDS | 30.0% | |
| GTCGCAAAAAAATATGCTTT+CGG | - | 10787:14962-14981 | MS.gene059492:CDS | 30.0% | |
| TAAACAACTGTATGGAATGA+AGG | + | 10787:14377-14396 | MS.gene059492:intergenic | 30.0% | |
| TACTTGAACCTAAAAGATGA+AGG | + | 10787:14152-14171 | MS.gene059492:intergenic | 30.0% | |
| TCCGTGAGCTAATTAAATAT+CGG | + | 10787:15802-15821 | MS.gene059492:intergenic | 30.0% | |
| TGGTATACAACATTACAACT+TGG | + | 10787:14116-14135 | MS.gene059492:intergenic | 30.0% | |
| TTATTAAGCTTGGTCTGTTA+GGG | + | 10787:13927-13946 | MS.gene059492:intergenic | 30.0% | |
| ! | AACAGTGTTTAAAATTCACG+TGG | + | 10787:14659-14678 | MS.gene059492:intergenic | 30.0% |
| ! | AGGTTGTATGCACATTATTT+TGG | + | 10787:15692-15711 | MS.gene059492:intergenic | 30.0% |
| ! | GCCATAGTTTTTATGATGAA+TGG | - | 10787:15338-15357 | MS.gene059492:intron | 30.0% |
| ! | TCATATCTGCTTTCCTTTTT+GGG | + | 10787:14195-14214 | MS.gene059492:intergenic | 30.0% |
| ! | TTCATATCTGCTTTCCTTTT+TGG | + | 10787:14196-14215 | MS.gene059492:intergenic | 30.0% |
| ! | TTTAAAATCATAAGAGACGC+AGG | + | 10787:15926-15945 | MS.gene059492:intergenic | 30.0% |
| !!! | GATACTTTTCTATTTTTGCC+AGG | - | 10787:15563-15582 | MS.gene059492:CDS | 30.0% |
| AAAAGACAGAAGTCATTCAG+TGG | + | 10787:16082-16101 | MS.gene059492:intergenic | 35.0% | |
| AAGGTCGATCATGTAATCAA+GGG | + | 10787:13741-13760 | MS.gene059492:intergenic | 35.0% | |
| ACTTCTATCAAGTTCTGTAG+AGG | - | 10787:14421-14440 | MS.gene059492:intron | 35.0% | |
| ACTTGAAGATTCATATCCCA+GGG | - | 10787:14265-14284 | MS.gene059492:intron | 35.0% | |
| AGTTAAATGCTATCTCCTGA+AGG | + | 10787:16149-16168 | MS.gene059492:intergenic | 35.0% | |
| ATATATGCTGGATCTGACAA+TGG | - | 10787:15597-15616 | MS.gene059492:CDS | 35.0% | |
| CTATATCTGAATTCTTGCCA+AGG | - | 10787:14630-14649 | MS.gene059492:intron | 35.0% | |
| CTTAAAGAAGTTCCTTACCT+GGG | + | 10787:14064-14083 | MS.gene059492:intergenic | 35.0% | |
| GAATTTACACCTTATCATCC+TGG | + | 10787:13775-13794 | MS.gene059492:intergenic | 35.0% | |
| GAGGTAGAGTATATAATCCA+CGG | + | 10787:14811-14830 | MS.gene059492:intergenic | 35.0% | |
| TAAAATTCACGTGGTTTCCT+TGG | + | 10787:14650-14669 | MS.gene059492:intergenic | 35.0% | |
| TAGAGGTTCTCAATATTGGA+GGG | - | 10787:14438-14457 | MS.gene059492:intron | 35.0% | |
| TCGTTTGTGTTAAAAGGGAT+TGG | - | 10787:14894-14913 | MS.gene059492:intron | 35.0% | |
| TCTAAATGACATAGCTAACC+AGG | - | 10787:14294-14313 | MS.gene059492:intron | 35.0% | |
| TCTATGTAGAACTCCCAAAA+AGG | - | 10787:14179-14198 | MS.gene059492:CDS | 35.0% | |
| TCTGTAGAGGTTCTCAATAT+TGG | - | 10787:14434-14453 | MS.gene059492:intron | 35.0% | |
| TGAGTTGCGATTATTAAGCT+TGG | + | 10787:13937-13956 | MS.gene059492:intergenic | 35.0% | |
| TGGATTATATACTCTACCTC+CGG | - | 10787:14811-14830 | MS.gene059492:intron | 35.0% | |
| TTAAAGAAGTTCCTTACCTG+GGG | + | 10787:14063-14082 | MS.gene059492:intergenic | 35.0% | |
| TTCGGCATCATTAAAACTGT+TGG | - | 10787:14980-14999 | MS.gene059492:CDS | 35.0% | |
| ! | ATTTTCCTCTAGGTACAAGT+TGG | + | 10787:15966-15985 | MS.gene059492:intergenic | 35.0% |
| ! | TCAAAACTGCATTTTCCTCT+AGG | + | 10787:15976-15995 | MS.gene059492:intergenic | 35.0% |
| !! | TCAGAAAAGTGTTTGAGAAG+TGG | + | 10787:14087-14106 | MS.gene059492:intergenic | 35.0% |
| AAAGACACTTCAAGTCCTTC+AGG | - | 10787:16131-16150 | MS.gene059492:CDS | 40.0% | |
| ACACTCCATTCCATTTGGAA+AGG | - | 10787:13839-13858 | MS.gene059492:intron | 40.0% | |
| ACTTGTCTGTCATGATATCC+AGG | - | 10787:15240-15259 | MS.gene059492:intron | 40.0% | |
| AGAATCTGAGAAAGTAGCAG+TGG | - | 10787:13652-13671 | MS.gene059492:CDS | 40.0% | |
| ATCAAGGGCCATCATGAAAT+CGG | + | 10787:13726-13745 | MS.gene059492:intergenic | 40.0% | |
| ATTAAAACTGTTGGCAGTGC+AGG | - | 10787:14989-15008 | MS.gene059492:CDS | 40.0% | |
| CAAAACCAACTTGTACCTAG+AGG | - | 10787:15958-15977 | MS.gene059492:intron | 40.0% | |
| CAAGGTCGATCATGTAATCA+AGG | + | 10787:13742-13761 | MS.gene059492:intergenic | 40.0% | |
| CATATATACCAGACAAGACC+TGG | + | 10787:15584-15603 | MS.gene059492:intergenic | 40.0% | |
| CCAGGCTGATGATTTATTAG+AGG | - | 10787:14312-14331 | MS.gene059492:intron | 40.0% | |
| CCTCTAATAAATCATCAGCC+TGG | + | 10787:14315-14334 | MS.gene059492:intergenic | 40.0% | |
| CTTGAAGATTCATATCCCAG+GGG | - | 10787:14266-14285 | MS.gene059492:intron | 40.0% | |
| GACTTGAAGATTCATATCCC+AGG | - | 10787:14264-14283 | MS.gene059492:intron | 40.0% | |
| GATATTGCACTTGAAAGACG+CGG | + | 10787:14525-14544 | MS.gene059492:intergenic | 40.0% | |
| GATGGAATCCGATTTCATGA+TGG | - | 10787:13715-13734 | MS.gene059492:intron | 40.0% | |
| GCTTAAAGAAGTTCCTTACC+TGG | + | 10787:14065-14084 | MS.gene059492:intergenic | 40.0% | |
| GTAGAGGTTCTCAATATTGG+AGG | - | 10787:14437-14456 | MS.gene059492:intron | 40.0% | |
| GTCTTGTCTGGTATATATGC+TGG | - | 10787:15585-15604 | MS.gene059492:CDS | 40.0% | |
| GTTTCTCGAAACAGTCTCTA+AGG | - | 10787:15306-15325 | MS.gene059492:intron | 40.0% | |
| TAGTTGGAGACCTTTCCAAA+TGG | + | 10787:13852-13871 | MS.gene059492:intergenic | 40.0% | |
| TGAACCTAAAAGATGAAGGG+AGG | + | 10787:14148-14167 | MS.gene059492:intergenic | 40.0% | |
| TTGAAGATTCATATCCCAGG+GGG | - | 10787:14267-14286 | MS.gene059492:intron | 40.0% | |
| TTGCTGCACAAGGAGTTATT+TGG | - | 10787:13677-13696 | MS.gene059492:intron | 40.0% | |
| TTGGATGAAAGAAATGACCG+TGG | - | 10787:14791-14810 | MS.gene059492:intron | 40.0% | |
| TTTCCAAATGGAATGGAGTG+TGG | + | 10787:13840-13859 | MS.gene059492:intergenic | 40.0% | |
| TTTGATGAACCTGCAAGCAA+AGG | + | 10787:16113-16132 | MS.gene059492:intergenic | 40.0% | |
| ! | AAATTGGTGGCCTTAAAACC+TGG | - | 10787:15026-15045 | MS.gene059492:CDS | 40.0% |
| ! | AACTCCTCCCTTCATCTTTT+AGG | - | 10787:14141-14160 | MS.gene059492:intron | 40.0% |
| ! | AATTGGTGGCCTTAAAACCT+GGG | - | 10787:15027-15046 | MS.gene059492:CDS | 40.0% |
| ! | CACAACTTTCCCAGGTTTTA+AGG | + | 10787:15039-15058 | MS.gene059492:intergenic | 40.0% |
| ! | TGGTAAGAGAGTTGATCAGA+TGG | - | 10787:13697-13716 | MS.gene059492:intron | 40.0% |
| !! | CAGAAGCTTTCTAAAATGCC+TGG | - | 10787:14567-14586 | MS.gene059492:intron | 40.0% |
| !! | CAGGCATTTTAGAAAGCTTC+TGG | + | 10787:14569-14588 | MS.gene059492:intergenic | 40.0% |
| !! | TATTTTTGCCAGGTCTTGTC+TGG | - | 10787:15573-15592 | MS.gene059492:CDS | 40.0% |
| !! | TTCAGTAGGATTTGCTGGAA+GGG | - | 10787:15136-15155 | MS.gene059492:intron | 40.0% |
| !! | TTTCAGTAGGATTTGCTGGA+AGG | - | 10787:15135-15154 | MS.gene059492:intron | 40.0% |
| !!! | CTCTAGGTACAAGTTGGTTT+TGG | + | 10787:15960-15979 | MS.gene059492:intergenic | 40.0% |
| !!! | TAGGTACAAGTTGGTTTTGG+TGG | + | 10787:15957-15976 | MS.gene059492:intergenic | 40.0% |
| AAAACCTGGGAAAGTTGTGC+TGG | - | 10787:15040-15059 | MS.gene059492:CDS | 45.0% | |
| AACTAAAAAATGCCCACCCC+AGG | - | 10787:14044-14063 | MS.gene059492:intron | 45.0% | |
| ACTGTTTCGAGAAACATGCC+CGG | + | 10787:15301-15320 | MS.gene059492:intergenic | 45.0% | |
| AGAAGAAGCCCGTGATATGA+TGG | - | 10787:14758-14777 | MS.gene059492:CDS | 45.0% | |
| AGGGTTTCAGTAGGATTTGC+TGG | - | 10787:15131-15150 | MS.gene059492:intron | 45.0% | |
| ATATCCAGCACAACTTTCCC+AGG | + | 10787:15047-15066 | MS.gene059492:intergenic | 45.0% | |
| ATGAAGGGAGGAGTTCACAT+TGG | + | 10787:14136-14155 | MS.gene059492:intergenic | 45.0% | |
| CAGATCGAAAACTGCTTGCA+AGG | - | 10787:14721-14740 | MS.gene059492:CDS | 45.0% | |
| CATCCACACTCCATTCCATT+TGG | - | 10787:13834-13853 | MS.gene059492:intron | 45.0% | |
| GATGATGACAGGGTTTCAGT+AGG | - | 10787:15122-15141 | MS.gene059492:CDS | 45.0% | |
| GGAGACCTTTCCAAATGGAA+TGG | + | 10787:13847-13866 | MS.gene059492:intergenic | 45.0% | |
| GTCATTTAGATTTGCCCCCT+GGG | + | 10787:14284-14303 | MS.gene059492:intergenic | 45.0% | |
| GTGATGCTCGGAAAAGATGA+AGG | - | 10787:15077-15096 | MS.gene059492:CDS | 45.0% | |
| TCACATCAACATACCTCAGC+CGG | + | 10787:14833-14852 | MS.gene059492:intergenic | 45.0% | |
| TCACTGCACAACATCTGGAA+TGG | - | 10787:15622-15641 | MS.gene059492:CDS | 45.0% | |
| TGAACCTGCAAGCAAAGGAA+AGG | + | 10787:16108-16127 | MS.gene059492:intergenic | 45.0% | |
| TGAGAAGGACCAGGATGATA+AGG | - | 10787:13763-13782 | MS.gene059492:intron | 45.0% | |
| TGGTATCACTGCACAACATC+TGG | - | 10787:15617-15636 | MS.gene059492:CDS | 45.0% | |
| TGTTCCTTTCCTTTGCTTGC+AGG | - | 10787:16101-16120 | MS.gene059492:CDS | 45.0% | |
| TTAGCTCACGGAAGGTAACT+AGG | - | 10787:15810-15829 | MS.gene059492:intron | 45.0% | |
| ! | AGTTTTCGATCTGGCACAAC+AGG | + | 10787:14714-14733 | MS.gene059492:intergenic | 45.0% |
| ! | CACTGCACAACATCTGGAAT+GGG | - | 10787:15623-15642 | MS.gene059492:CDS | 45.0% |
| ! | CTTGCAAGCAGTTTTCGATC+TGG | + | 10787:14723-14742 | MS.gene059492:intergenic | 45.0% |
| ! | TCAACTGGAAGTGCAAACAC+AGG | + | 10787:15545-15564 | MS.gene059492:intergenic | 45.0% |
| ! | TGGCAACGATGATGATGACA+GGG | - | 10787:15112-15131 | MS.gene059492:CDS | 45.0% |
| ! | TGTCATTTAGATTTGCCCCC+TGG | + | 10787:14285-14304 | MS.gene059492:intergenic | 45.0% |
| !! | ATATGATGGAGGGGGGATTT+TGG | - | 10787:14772-14791 | MS.gene059492:intron | 45.0% |
| !! | GCTGGTGGCGGTTTATTTAA+AGG | - | 10787:14234-14253 | MS.gene059492:intron | 45.0% |
| AAAAATGCCCACCCCAGGTA+AGG | - | 10787:14049-14068 | MS.gene059492:intron | 50.0% | |
| AAGAAGTTCCTTACCTGGGG+TGG | + | 10787:14060-14079 | MS.gene059492:intergenic | 50.0% | |
| AGAAGCCCGTGATATGATGG+AGG | - | 10787:14761-14780 | MS.gene059492:CDS | 50.0% | |
| AGAAGTTCCTTACCTGGGGT+GGG | + | 10787:14059-14078 | MS.gene059492:intergenic | 50.0% | |
| AGTGCAAACACAGGCAGAGA+AGG | + | 10787:15536-15555 | MS.gene059492:intergenic | 50.0% | |
| ATATACTCTACCTCCGGCTG+AGG | - | 10787:14817-14836 | MS.gene059492:intron | 50.0% | |
| ATCCCCCCTCCATCATATCA+CGG | + | 10787:14770-14789 | MS.gene059492:intergenic | 50.0% | |
| ATCGCAACTCACACACATGC+TGG | - | 10787:13946-13965 | MS.gene059492:intron | 50.0% | |
| CATGATCGACCTTGCTGAGA+AGG | - | 10787:13748-13767 | MS.gene059492:intron | 50.0% | |
| CTGTTTCGAGAAACATGCCC+GGG | + | 10787:15300-15319 | MS.gene059492:intergenic | 50.0% | |
| GATATCCAGGCAAGTGTGAC+AGG | - | 10787:15253-15272 | MS.gene059492:intron | 50.0% | |
| GTGAGTCGAATTGGATGACG+TGG | - | 10787:15158-15177 | MS.gene059492:intron | 50.0% | |
| TCGCAACTCACACACATGCT+GGG | - | 10787:13947-13966 | MS.gene059492:intron | 50.0% | |
| ! | AAGCCCGTGATATGATGGAG+GGG | - | 10787:14763-14782 | MS.gene059492:CDS | 50.0% |
| ! | CTGGCAACGATGATGATGAC+AGG | - | 10787:15111-15130 | MS.gene059492:CDS | 50.0% |
| ! | GAAGCCCGTGATATGATGGA+GGG | - | 10787:14762-14781 | MS.gene059492:CDS | 50.0% |
| ! | GATGAAGGTGCAGACAACAC+TGG | - | 10787:15092-15111 | MS.gene059492:CDS | 50.0% |
| !!! | AGTTGGTTTTGGTGGCAACG+TGG | + | 10787:15949-15968 | MS.gene059492:intergenic | 50.0% |
| AGCAGTGGAGTTGCTGCACA+AGG | - | 10787:13667-13686 | MS.gene059492:intron | 55.0% | |
| CATCAACATACCTCAGCCGG+AGG | + | 10787:14830-14849 | MS.gene059492:intergenic | 55.0% | |
| CATCCTGGTCCTTCTCAGCA+AGG | + | 10787:13760-13779 | MS.gene059492:intergenic | 55.0% | |
| GATGCAGCGCAAGTCACTGT+TGG | - | 10787:13991-14010 | MS.gene059492:intron | 55.0% | |
| GCTGGAAGGGTGAGTCGAAT+TGG | - | 10787:15149-15168 | MS.gene059492:intron | 55.0% | |
| TCCAGGCAAGTGTGACAGGA+CGG | - | 10787:15257-15276 | MS.gene059492:intron | 55.0% | |
| TCCCCCCTCCATCATATCAC+GGG | + | 10787:14769-14788 | MS.gene059492:intergenic | 55.0% | |
| TTGTTACGCCGAGTTGCAGC+TGG | - | 10787:14216-14235 | MS.gene059492:intron | 55.0% | |
| ! | AGCCCGTGATATGATGGAGG+GGG | - | 10787:14764-14783 | MS.gene059492:CDS | 55.0% |
| AACCGCCACCAGCTGCAACT+CGG | + | 10787:14227-14246 | MS.gene059492:intergenic | 60.0% | |
| AGAAACATGCCCGGGCGTAC+GGG | + | 10787:15292-15311 | MS.gene059492:intergenic | 60.0% | |
| CGACCTTGCTGAGAAGGACC+AGG | - | 10787:13754-13773 | MS.gene059492:intron | 60.0% | |
| GAGAAACATGCCCGGGCGTA+CGG | + | 10787:15293-15312 | MS.gene059492:intergenic | 60.0% | |
| TCCGTCCTGTCACACTTGCC+TGG | + | 10787:15261-15280 | MS.gene059492:intergenic | 60.0% | |
| TTACGCCGAGTTGCAGCTGG+TGG | - | 10787:14219-14238 | MS.gene059492:intron | 60.0% | |
| ! | GCCCGTGATATGATGGAGGG+GGG | - | 10787:14765-14784 | MS.gene059492:CDS | 60.0% |
| AAGCCACATCCCGTACGCCC+GGG | - | 10787:15280-15299 | MS.gene059492:intron | 65.0% | |
| GAAGCCACATCCCGTACGCC+CGG | - | 10787:15279-15298 | MS.gene059492:intron | 65.0% | |
| ATGCCCGGGCGTACGGGATG+TGG | + | 10787:15286-15305 | MS.gene059492:intergenic | 70.0% | |
| CGCCGAGTTGCAGCTGGTGG+CGG | - | 10787:14222-14241 | MS.gene059492:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10787 | gene | 13629 | 16170 | 13629 | ID=MS.gene059492 |
| 10787 | mRNA | 13629 | 16170 | 13629 | ID=MS.gene059492.t1;Parent=MS.gene059492 |
| 10787 | exon | 16013 | 16170 | 16013 | ID=MS.gene059492.t1.exon1;Parent=MS.gene059492.t1 |
| 10787 | CDS | 16013 | 16170 | 16013 | ID=cds.MS.gene059492.t1;Parent=MS.gene059492.t1 |
| 10787 | exon | 15734 | 15782 | 15734 | ID=MS.gene059492.t1.exon2;Parent=MS.gene059492.t1 |
| 10787 | CDS | 15734 | 15782 | 15734 | ID=cds.MS.gene059492.t1;Parent=MS.gene059492.t1 |
| 10787 | exon | 15511 | 15688 | 15511 | ID=MS.gene059492.t1.exon3;Parent=MS.gene059492.t1 |
| 10787 | CDS | 15511 | 15688 | 15511 | ID=cds.MS.gene059492.t1;Parent=MS.gene059492.t1 |
| 10787 | exon | 14957 | 15147 | 14957 | ID=MS.gene059492.t1.exon4;Parent=MS.gene059492.t1 |
| 10787 | CDS | 14957 | 15147 | 14957 | ID=cds.MS.gene059492.t1;Parent=MS.gene059492.t1 |
| 10787 | exon | 14642 | 14788 | 14642 | ID=MS.gene059492.t1.exon5;Parent=MS.gene059492.t1 |
| 10787 | CDS | 14642 | 14788 | 14642 | ID=cds.MS.gene059492.t1;Parent=MS.gene059492.t1 |
| 10787 | exon | 14472 | 14537 | 14472 | ID=MS.gene059492.t1.exon6;Parent=MS.gene059492.t1 |
| 10787 | CDS | 14472 | 14537 | 14472 | ID=cds.MS.gene059492.t1;Parent=MS.gene059492.t1 |
| 10787 | exon | 14155 | 14214 | 14155 | ID=MS.gene059492.t1.exon7;Parent=MS.gene059492.t1 |
| 10787 | CDS | 14155 | 14214 | 14155 | ID=cds.MS.gene059492.t1;Parent=MS.gene059492.t1 |
| 10787 | exon | 13629 | 13676 | 13629 | ID=MS.gene059492.t1.exon8;Parent=MS.gene059492.t1 |
| 10787 | CDS | 13629 | 13676 | 13629 | ID=cds.MS.gene059492.t1;Parent=MS.gene059492.t1 |
| Gene Sequence |
| Protein sequence |
