Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56996.t1 | XP_013459883.1 | 98.1 | 480 | 9 | 0 | 1 | 480 | 1 | 480 | 1.90E-271 | 944.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56996.t1 | Q94IB8 | 76.0 | 479 | 115 | 0 | 2 | 480 | 1 | 479 | 3.2e-219 | 762.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56996.t1 | A0A072UVT1 | 98.1 | 480 | 9 | 0 | 1 | 480 | 1 | 480 | 1.4e-271 | 944.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene022257 | MS.gene56996 | PPI |
MS.gene25914 | MS.gene56996 | PPI |
MS.gene56996 | MS.gene70587 | PPI |
MS.gene56996 | MS.gene074392 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56996.t1 | MTR_3g054030 | 98.125 | 480 | 9 | 0 | 1 | 480 | 1 | 480 | 0.0 | 972 |
MS.gene56996.t1 | MTR_5g072020 | 98.125 | 480 | 9 | 0 | 1 | 480 | 1 | 480 | 0.0 | 970 |
MS.gene56996.t1 | MTR_1g018970 | 82.216 | 343 | 61 | 0 | 2 | 344 | 1 | 343 | 0.0 | 563 |
MS.gene56996.t1 | MTR_2g090820 | 73.770 | 122 | 20 | 1 | 341 | 450 | 15 | 136 | 9.73e-54 | 177 |
MS.gene56996.t1 | MTR_1g019030 | 90.722 | 97 | 9 | 0 | 384 | 480 | 27 | 123 | 1.78e-52 | 173 |
MS.gene56996.t1 | MTR_1g019000 | 93.243 | 74 | 5 | 0 | 305 | 378 | 21 | 94 | 8.89e-42 | 144 |
MS.gene56996.t1 | MTR_6g033290 | 25.654 | 382 | 256 | 7 | 111 | 479 | 101 | 467 | 8.54e-35 | 136 |
MS.gene56996.t1 | MTR_3g008020 | 22.179 | 257 | 170 | 7 | 110 | 346 | 100 | 346 | 1.91e-14 | 75.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene56996.t1 | AT4G36480 | 75.992 | 479 | 115 | 0 | 2 | 480 | 1 | 479 | 0.0 | 782 |
MS.gene56996.t1 | AT4G36480 | 75.992 | 479 | 115 | 0 | 2 | 480 | 1 | 479 | 0.0 | 782 |
MS.gene56996.t1 | AT4G36480 | 77.910 | 335 | 74 | 0 | 2 | 336 | 1 | 335 | 0.0 | 571 |
MS.gene56996.t1 | AT3G48780 | 26.509 | 381 | 252 | 7 | 111 | 478 | 101 | 466 | 9.48e-37 | 142 |
MS.gene56996.t1 | AT3G48780 | 26.509 | 381 | 252 | 7 | 111 | 478 | 101 | 466 | 9.48e-37 | 142 |
MS.gene56996.t1 | AT5G23670 | 25.722 | 381 | 255 | 7 | 111 | 478 | 101 | 466 | 7.48e-36 | 139 |
MS.gene56996.t1 | AT5G23670 | 25.722 | 381 | 255 | 7 | 111 | 478 | 101 | 466 | 7.48e-36 | 139 |
MS.gene56996.t1 | AT3G48790 | 26.786 | 336 | 218 | 7 | 152 | 478 | 7 | 323 | 1.15e-27 | 114 |
MS.gene56996.t1 | AT3G48790 | 25.890 | 309 | 201 | 7 | 179 | 478 | 2 | 291 | 3.11e-20 | 91.7 |
MS.gene56996.t1 | AT5G04620 | 23.798 | 416 | 251 | 16 | 83 | 467 | 70 | 450 | 4.09e-19 | 90.1 |
MS.gene56996.t1 | AT5G04620 | 23.891 | 293 | 188 | 8 | 83 | 350 | 70 | 352 | 3.04e-18 | 87.4 |
MS.gene56996.t1 | AT5G04620 | 24.518 | 363 | 211 | 16 | 117 | 467 | 6 | 317 | 1.90e-12 | 68.9 |
Find 89 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATTCAATTCTATACTCTTA+TGG | 0.157510 | 5.1:-55429656 | MS.gene56996:CDS |
CTTCATCTTTGTTAATATAT+TGG | 0.160264 | 5.1:+55427905 | None:intergenic |
TGGTGAACACTACATTAAAT+TGG | 0.173675 | 5.1:-55433241 | MS.gene56996:CDS |
CAATTTAATGATATCATCTA+AGG | 0.207047 | 5.1:+55428487 | None:intergenic |
TTCATCTTTGTTAATATATT+GGG | 0.243049 | 5.1:+55427906 | None:intergenic |
GCAAACTATCTTGGGCTTAT+AGG | 0.246504 | 5.1:-55429972 | MS.gene56996:CDS |
GGCTTCAGCTGTTGTTAATT+TGG | 0.249613 | 5.1:-55433261 | MS.gene56996:CDS |
TTTGGTGTGCTTGGAAGTTC+TGG | 0.252911 | 5.1:-55428419 | MS.gene56996:CDS |
ATCTATAACTCTTGCACTTC+CGG | 0.274595 | 5.1:+55428188 | None:intergenic |
ATTCAATTCTATACTCTTAT+GGG | 0.280484 | 5.1:-55429655 | MS.gene56996:CDS |
AATATAACGCCTCAAATTCT+TGG | 0.308467 | 5.1:+55429195 | None:intergenic |
ACTTCTGCTTTAGAGAAATA+TGG | 0.315204 | 5.1:-55429840 | MS.gene56996:CDS |
AACTTCTTTACCATTAACTA+TGG | 0.324145 | 5.1:+55430010 | None:intergenic |
GGCCCACATACCATAGTTAA+TGG | 0.336802 | 5.1:-55430020 | MS.gene56996:CDS |
TTTGCTTCAGCAAACTATCT+TGG | 0.349658 | 5.1:-55429981 | MS.gene56996:CDS |
TTTAATCTCAAATAAACAAT+TGG | 0.376539 | 5.1:+55427635 | None:intergenic |
TTGCTTCAGCAAACTATCTT+GGG | 0.384774 | 5.1:-55429980 | MS.gene56996:CDS |
CACAACAATTCTTACACGTT+CGG | 0.393295 | 5.1:+55427562 | None:intergenic |
GGTGAACACTACATTAAATT+GGG | 0.397917 | 5.1:-55433240 | MS.gene56996:CDS |
ATTGCAGCGCTTGCAAGATA+TGG | 0.398789 | 5.1:+55427957 | None:intergenic |
CTGGATGAGAGCAACTCATT+TGG | 0.408220 | 5.1:-55428437 | MS.gene56996:CDS |
ATAAGATTGTTTGTTTCTGC+AGG | 0.409979 | 5.1:-55427408 | MS.gene56996:CDS |
AGCAACTCATTTGGTGTGCT+TGG | 0.418751 | 5.1:-55428428 | MS.gene56996:CDS |
AGAACAACATTGCTGTGTTA+TGG | 0.426220 | 5.1:-55427884 | MS.gene56996:CDS |
AGATGATATCATTAAATTGA+AGG | 0.426232 | 5.1:-55428483 | MS.gene56996:CDS |
CAGTGCTTCTAGAAAGATAA+AGG | 0.430339 | 5.1:+55429293 | None:intergenic |
GAAAGAAGATTCTGTATTTG+TGG | 0.431444 | 5.1:-55427478 | MS.gene56996:CDS |
AGGCATCTGAATCATTGAAA+AGG | 0.432396 | 5.1:-55427362 | MS.gene56996:CDS |
GAGAAGGAATAAGCGGTTGC+GGG | 0.442969 | 5.1:+55430854 | None:intergenic |
TAAGAGTATAGAATTGAATC+AGG | 0.451302 | 5.1:+55429659 | None:intergenic |
TTACCATTAACTATGGTATG+TGG | 0.452309 | 5.1:+55430017 | None:intergenic |
AATTTCTTATGCAGTGCTGC+TGG | 0.466285 | 5.1:-55430041 | MS.gene56996:intron |
GCACTATGAACCACCAGTGC+TGG | 0.466748 | 5.1:-55430818 | MS.gene56996:CDS |
AAATAAACAATTGGTGACTC+TGG | 0.467192 | 5.1:+55427644 | None:intergenic |
AGAGGTCTCACTGAACACTA+TGG | 0.480877 | 5.1:-55428395 | MS.gene56996:CDS |
AGATCTTATAACTGCTGCTA+TGG | 0.488053 | 5.1:-55428244 | MS.gene56996:CDS |
TTGAGATTAAAGAAGTCAAC+GGG | 0.490251 | 5.1:-55427623 | MS.gene56996:CDS |
GGCATCTGAATCATTGAAAA+GGG | 0.490844 | 5.1:-55427361 | MS.gene56996:CDS |
ATTGGCTACTGCAGGGTTGT+TGG | 0.493292 | 5.1:-55427696 | MS.gene56996:intron |
ATAAGCACACCAAGAATTTG+AGG | 0.494318 | 5.1:-55429204 | MS.gene56996:CDS |
GTTGGAAATACCAGGCTTCA+CGG | 0.496792 | 5.1:-55427678 | MS.gene56996:CDS |
TTGCAGCGATTGAGTAGCTC+TGG | 0.506343 | 5.1:-55428005 | MS.gene56996:intron |
TTGACGAGTTATGTGATGAA+TGG | 0.512063 | 5.1:-55430879 | MS.gene56996:CDS |
TGCTGCTATGGGACATGCAT+TGG | 0.515548 | 5.1:-55428232 | MS.gene56996:CDS |
CGTAATCACCTTTCCAGCAC+TGG | 0.519357 | 5.1:+55430805 | None:intergenic |
GCATCATACCTTGTTTGTCA+AGG | 0.527121 | 5.1:+55432968 | None:intergenic |
AGAGAAGGAATAAGCGGTTG+CGG | 0.527440 | 5.1:+55430853 | None:intergenic |
GCTTTAGAGAAATATGGTGT+TGG | 0.529087 | 5.1:-55429834 | MS.gene56996:CDS |
ATCTTATTCCTACAGGCAAA+CGG | 0.529325 | 5.1:+55427424 | None:intergenic |
GTGCTTGGAAGTTCTGGAAG+AGG | 0.536425 | 5.1:-55428413 | MS.gene56996:CDS |
CAGGGATGAAGGAGTCCACT+GGG | 0.540737 | 5.1:-55429329 | MS.gene56996:CDS |
TGACTCGCAACCGTGAAGCC+TGG | 0.541831 | 5.1:+55427668 | None:intergenic |
TGACGAGTTATGTGATGAAT+GGG | 0.544155 | 5.1:-55430878 | MS.gene56996:CDS |
CATCATACCTTGTTTGTCAA+GGG | 0.553882 | 5.1:+55432969 | None:intergenic |
GATCTTATAACTGCTGCTAT+GGG | 0.556581 | 5.1:-55428243 | MS.gene56996:CDS |
ATGAACCACCAGTGCTGGAA+AGG | 0.558391 | 5.1:-55430813 | MS.gene56996:intron |
TACCATTAACTATGGTATGT+GGG | 0.558768 | 5.1:+55430018 | None:intergenic |
ACAAACAATCTTATTCCTAC+AGG | 0.559718 | 5.1:+55427417 | None:intergenic |
ACAGGGATGAAGGAGTCCAC+TGG | 0.559845 | 5.1:-55429330 | MS.gene56996:intron |
CAATTGTTCCATAAAACCCA+CGG | 0.560580 | 5.1:+55429799 | None:intergenic |
TGCATATCTTTATCAAGAGA+AGG | 0.565672 | 5.1:+55430838 | None:intergenic |
AACATTGCTGTGTTATGGAA+AGG | 0.565817 | 5.1:-55427879 | MS.gene56996:intron |
TGCAAGAGTTATAGATCACC+AGG | 0.568076 | 5.1:-55428181 | MS.gene56996:intron |
GCAGGGTTGTTGGAAATACC+AGG | 0.569040 | 5.1:-55427686 | MS.gene56996:intron |
TTGGTTCATGTGGTCCCCGT+GGG | 0.570350 | 5.1:-55429815 | MS.gene56996:CDS |
TAAGATTGTTTGTTTCTGCA+GGG | 0.573662 | 5.1:-55427407 | MS.gene56996:CDS |
TTTGAGATTAAAGAAGTCAA+CGG | 0.584081 | 5.1:-55427624 | MS.gene56996:CDS |
AATTTAATGATATCATCTAA+GGG | 0.585413 | 5.1:+55428488 | None:intergenic |
AGCAGGAATAGCACTGAACA+TGG | 0.585997 | 5.1:+55429625 | None:intergenic |
CATGCATTGGCCACAGAAGG+AGG | 0.588651 | 5.1:-55428219 | MS.gene56996:CDS |
AATTGTTCCATAAAACCCAC+GGG | 0.590052 | 5.1:+55429800 | None:intergenic |
GGACATGCATTGGCCACAGA+AGG | 0.590206 | 5.1:-55428222 | MS.gene56996:CDS |
AAAACTATAGCTCTTGCAGA+AGG | 0.592321 | 5.1:+55433197 | None:intergenic |
GTCCACTGGGGAATACAGAA+TGG | 0.593062 | 5.1:-55429316 | MS.gene56996:CDS |
TGTTGTCGAAGCTCTCTACC+AGG | 0.597185 | 5.1:-55429173 | MS.gene56996:intron |
TAAAAGACCCTTGACAAACA+AGG | 0.601029 | 5.1:-55432976 | MS.gene56996:intron |
ACAGAAGGAGGATTCTGCAC+CGG | 0.604655 | 5.1:-55428207 | MS.gene56996:CDS |
GGTGCAGAATCCTCCTTCTG+TGG | 0.610091 | 5.1:+55428209 | None:intergenic |
GACAAGTGCCGTTTGCCTGT+AGG | 0.612786 | 5.1:-55427432 | MS.gene56996:CDS |
AATCACCTTTCCAGCACTGG+TGG | 0.626413 | 5.1:+55430808 | None:intergenic |
AAATATGGTGTTGGTTCATG+TGG | 0.629485 | 5.1:-55429825 | MS.gene56996:CDS |
GTTGGTTCATGTGGTCCCCG+TGG | 0.636228 | 5.1:-55429816 | MS.gene56996:CDS |
GCAGCGCTTGCAAGATATGG+AGG | 0.640184 | 5.1:+55427960 | None:intergenic |
TTATCAAGAGAAGGAATAAG+CGG | 0.647888 | 5.1:+55430847 | None:intergenic |
TTCAGAGTCTGATCTTCACA+AGG | 0.660377 | 5.1:-55427382 | MS.gene56996:CDS |
GGCCATTCTGTATTCCCCAG+TGG | 0.696448 | 5.1:+55429314 | None:intergenic |
AGGAATAGCACTGAACATGG+TGG | 0.728012 | 5.1:+55429628 | None:intergenic |
AGGGATGAAGGAGTCCACTG+GGG | 0.777778 | 5.1:-55429328 | MS.gene56996:CDS |
ATTGTTCCATAAAACCCACG+GGG | 0.815269 | 5.1:+55429801 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTTATAATTTGAAAAGAA+AGG | - | chr5.1:55428342-55428361 | MS.gene56996:intron | 10.0% |
!! | TCCAAATAAATAAATTAAAA+AGG | - | chr5.1:55432841-55432860 | MS.gene56996:intron | 10.0% |
!!! | AAATTAAGAATTTATTTTCA+AGG | - | chr5.1:55432508-55432527 | MS.gene56996:intron | 10.0% |
!!! | AATTAGGATTTTATTTTTAA+AGG | - | chr5.1:55428381-55428400 | MS.gene56996:intron | 10.0% |
!!! | ACTATTTTGAATTTTTTATA+CGG | + | chr5.1:55429099-55429118 | None:intergenic | 10.0% |
!!! | ATAATTTTGTATTTTTTAAC+AGG | - | chr5.1:55431259-55431278 | MS.gene56996:intron | 10.0% |
!!! | TAATTTTGTATTTTTTAACA+GGG | - | chr5.1:55431260-55431279 | MS.gene56996:intron | 10.0% |
!!! | TATTTTAAAAAATGGATAAT+TGG | + | chr5.1:55430534-55430553 | None:intergenic | 10.0% |
!!! | TTTTATTGAAGTTAAAAATA+AGG | - | chr5.1:55430304-55430323 | MS.gene56996:intron | 10.0% |
!! | AACTATTAAATTACAATGTT+AGG | - | chr5.1:55428908-55428927 | MS.gene56996:intron | 15.0% |
!! | AATTTAATGATATCATCTAA+GGG | + | chr5.1:55432122-55432141 | None:intergenic | 15.0% |
!! | ACTATTAAATTACAATGTTA+GGG | - | chr5.1:55428909-55428928 | MS.gene56996:intron | 15.0% |
!! | AGAAAAAGAATTTATTGATA+TGG | + | chr5.1:55430691-55430710 | None:intergenic | 15.0% |
!! | ATAAACTATAGTTAAATGAT+AGG | + | chr5.1:55428051-55428070 | None:intergenic | 15.0% |
!! | ATTTAACAATAAAATGTCAT+AGG | - | chr5.1:55429332-55429351 | MS.gene56996:intron | 15.0% |
!! | CATTTGGTATATTATTAATT+AGG | - | chr5.1:55428365-55428384 | MS.gene56996:intron | 15.0% |
!! | GAAAAAGAATTTATTGATAT+GGG | + | chr5.1:55430690-55430709 | None:intergenic | 15.0% |
!! | TAAAATGATAAAAATAGATG+AGG | + | chr5.1:55429847-55429866 | None:intergenic | 15.0% |
!! | TTAAATTGAAGGAAAAATAT+CGG | - | chr5.1:55432135-55432154 | MS.gene56996:intron | 15.0% |
!! | TTATATCTACTTTATATTGT+AGG | - | chr5.1:55430736-55430755 | MS.gene56996:intron | 15.0% |
!! | TTCATCTTTGTTAATATATT+GGG | + | chr5.1:55432704-55432723 | None:intergenic | 15.0% |
!! | TTTAATCTCAAATAAACAAT+TGG | + | chr5.1:55432975-55432994 | None:intergenic | 15.0% |
!!! | AATATTAAAGTTTGTTTTTG+AGG | - | chr5.1:55430840-55430859 | MS.gene56996:CDS | 15.0% |
!!! | ACAATCAGTATTTTAAAAAA+TGG | + | chr5.1:55430542-55430561 | None:intergenic | 15.0% |
!!! | AGAAAAAATTTAGAATCTAA+AGG | + | chr5.1:55430145-55430164 | None:intergenic | 15.0% |
!!! | AGAATTCTGAAAATTTTAAA+AGG | + | chr5.1:55432087-55432106 | None:intergenic | 15.0% |
!!! | ATAGTTTTTGGATATAATTT+TGG | - | chr5.1:55427425-55427444 | MS.gene56996:CDS | 15.0% |
!!! | ATTTCTCTTATAATTTTTCT+TGG | + | chr5.1:55428134-55428153 | None:intergenic | 15.0% |
!!! | ATTTTTTAGTATTCTTTATG+AGG | - | chr5.1:55428623-55428642 | MS.gene56996:intron | 15.0% |
!!! | GAAAAAATTTAGAATCTAAA+GGG | + | chr5.1:55430144-55430163 | None:intergenic | 15.0% |
!!! | GCCTTTTTAATTTATTTATT+TGG | + | chr5.1:55432845-55432864 | None:intergenic | 15.0% |
!!! | TAAATTCATGAACTTTTTTT+AGG | - | chr5.1:55429986-55430005 | MS.gene56996:CDS | 15.0% |
!!! | TCTTTACTTTTTTATTACAA+TGG | - | chr5.1:55431160-55431179 | MS.gene56996:intron | 15.0% |
!!! | TTTACTTTTTACTTTATAGA+TGG | - | chr5.1:55427481-55427500 | MS.gene56996:CDS | 15.0% |
!!! | TTTTAAAATTTTCAGAATTC+TGG | - | chr5.1:55432086-55432105 | MS.gene56996:intron | 15.0% |
!!! | TTTTTGGTTATAAATTAATG+TGG | - | chr5.1:55429600-55429619 | MS.gene56996:CDS | 15.0% |
!!! | TTTTTTTATCTTATGTTTGA+AGG | - | chr5.1:55427536-55427555 | MS.gene56996:intron | 15.0% |
!! | AATATCAGAGTTATATAAAG+TGG | + | chr5.1:55431216-55431235 | None:intergenic | 20.0% |
!! | AATTTATTCATAATTTCTGC+AGG | - | chr5.1:55429702-55429721 | MS.gene56996:CDS | 20.0% |
!! | ACAAAACATAAGATTATTTC+AGG | + | chr5.1:55429927-55429946 | None:intergenic | 20.0% |
!! | AGATGATATCATTAAATTGA+AGG | - | chr5.1:55432124-55432143 | MS.gene56996:intron | 20.0% |
!! | ATTCAATTCTATACTCTTAT+GGG | - | chr5.1:55430952-55430971 | MS.gene56996:intron | 20.0% |
!! | ATTGAAGTTAAAAATAAGGA+AGG | - | chr5.1:55430308-55430327 | MS.gene56996:intron | 20.0% |
!! | CAAAACATAAGATTATTTCA+GGG | + | chr5.1:55429926-55429945 | None:intergenic | 20.0% |
!! | CAATTTAATGATATCATCTA+AGG | + | chr5.1:55432123-55432142 | None:intergenic | 20.0% |
!! | CTTCATCTTTGTTAATATAT+TGG | + | chr5.1:55432705-55432724 | None:intergenic | 20.0% |
!! | GACAAAAATTTGAACAAAAA+TGG | + | chr5.1:55431068-55431087 | None:intergenic | 20.0% |
!! | TAAAAAAGGAGATATAATTG+TGG | - | chr5.1:55431010-55431029 | MS.gene56996:intron | 20.0% |
!! | TAAAATCAAATTTGTAGTTG+AGG | + | chr5.1:55429411-55429430 | None:intergenic | 20.0% |
!! | TAGAAATTTGAATGCATTAA+CGG | + | chr5.1:55432300-55432319 | None:intergenic | 20.0% |
!! | TGTCTGATGATATTTATATT+GGG | - | chr5.1:55431084-55431103 | MS.gene56996:intron | 20.0% |
!! | TTGTCTGATGATATTTATAT+TGG | - | chr5.1:55431083-55431102 | MS.gene56996:intron | 20.0% |
!! | TTTAAAAAATGGATAATTGG+CGG | + | chr5.1:55430531-55430550 | None:intergenic | 20.0% |
!!! | AACAATTTTCCTATTTTCAT+TGG | + | chr5.1:55429486-55429505 | None:intergenic | 20.0% |
!!! | AATAAAAATATAGAAGTGCA+CGG | + | chr5.1:55431479-55431498 | None:intergenic | 20.0% |
!!! | ATTTATTGAAGTTTTTCTCT+TGG | - | chr5.1:55427565-55427584 | MS.gene56996:intron | 20.0% |
!!! | CAATGTTTATTTCTTACTTT+CGG | - | chr5.1:55433069-55433088 | MS.gene56996:intron | 20.0% |
!!! | CTATTTAGATTTTAAGTGTT+CGG | + | chr5.1:55428544-55428563 | None:intergenic | 20.0% |
!!! | TCTTGGTATTTTACTATTTT+AGG | - | chr5.1:55428940-55428959 | MS.gene56996:intron | 20.0% |
!!! | TCTTTTTTATATCACATTCT+TGG | + | chr5.1:55428887-55428906 | None:intergenic | 20.0% |
! | AACTTCTTTACCATTAACTA+TGG | + | chr5.1:55430600-55430619 | None:intergenic | 25.0% |
! | AACTTGTATCATAGCATATA+GGG | - | chr5.1:55430271-55430290 | MS.gene56996:intron | 25.0% |
! | AATCATATGGATCTAACATA+TGG | - | chr5.1:55428597-55428616 | MS.gene56996:intron | 25.0% |
! | AGAAAATGTATGACATACAA+GGG | + | chr5.1:55430243-55430262 | None:intergenic | 25.0% |
! | ATACTGTAATATAGATCAGA+TGG | - | chr5.1:55428076-55428095 | MS.gene56996:intron | 25.0% |
! | ATATTAGATTGTGATGATTG+AGG | - | chr5.1:55430334-55430353 | MS.gene56996:intron | 25.0% |
! | ATCATATGGATCTAACATAT+GGG | - | chr5.1:55428598-55428617 | MS.gene56996:intron | 25.0% |
! | ATGGTATTTACTTGTATGTT+TGG | + | chr5.1:55429367-55429386 | None:intergenic | 25.0% |
! | ATTCTTAATTTCAGTACACT+TGG | + | chr5.1:55432499-55432518 | None:intergenic | 25.0% |
! | GATTCAATTCTATACTCTTA+TGG | - | chr5.1:55430951-55430970 | MS.gene56996:intron | 25.0% |
! | GTATTGTAGTGTCTATTATT+TGG | - | chr5.1:55432792-55432811 | MS.gene56996:intron | 25.0% |
! | TAAAGGTAAAGTGACTTTAT+TGG | - | chr5.1:55428398-55428417 | MS.gene56996:CDS | 25.0% |
! | TATGTTCAGTAATAAAAGCA+TGG | + | chr5.1:55428724-55428743 | None:intergenic | 25.0% |
! | TATTAGATTGTGATGATTGA+GGG | - | chr5.1:55430335-55430354 | MS.gene56996:intron | 25.0% |
! | TATTTCATCGAAATGCTAAT+AGG | - | chr5.1:55428423-55428442 | MS.gene56996:CDS | 25.0% |
! | TCAATCTATTCATTCTACTA+TGG | + | chr5.1:55427929-55427948 | None:intergenic | 25.0% |
! | TGATTTATGACAAAACATTG+TGG | - | chr5.1:55428195-55428214 | MS.gene56996:CDS | 25.0% |
! | TTATGAATCATGGAATCATA+GGG | - | chr5.1:55427853-55427872 | MS.gene56996:intron | 25.0% |
!! | AACTTTTATATGAGATGCAT+TGG | - | chr5.1:55432893-55432912 | MS.gene56996:intron | 25.0% |
!! | AGTGGTTTTTATTAATGTGT+AGG | - | chr5.1:55428505-55428524 | MS.gene56996:CDS | 25.0% |
!! | ATAACTCTGATATTTCAAGT+AGG | - | chr5.1:55431222-55431241 | MS.gene56996:intron | 25.0% |
!! | ATATTTTGTAGTAGATAGCA+GGG | - | chr5.1:55428789-55428808 | MS.gene56996:intron | 25.0% |
!! | ATTTTCATGATCAAAACAGT+TGG | - | chr5.1:55429564-55429583 | MS.gene56996:intron | 25.0% |
!! | GATATACACTTATCTGTTTT+GGG | - | chr5.1:55428567-55428586 | MS.gene56996:intron | 25.0% |
!! | GCAAGAATAGCAAAATTTTT+AGG | - | chr5.1:55430921-55430940 | MS.gene56996:intron | 25.0% |
!! | TAACTTGTATCATAGCATAT+AGG | - | chr5.1:55430270-55430289 | MS.gene56996:intron | 25.0% |
!! | TAAGAGTATAGAATTGAATC+AGG | + | chr5.1:55430951-55430970 | None:intergenic | 25.0% |
!! | TATATTTTGTAGTAGATAGC+AGG | - | chr5.1:55428788-55428807 | MS.gene56996:intron | 25.0% |
!! | TGATATACACTTATCTGTTT+TGG | - | chr5.1:55428566-55428585 | MS.gene56996:intron | 25.0% |
!! | TTTGAGATTAAAGAAGTCAA+CGG | - | chr5.1:55432983-55433002 | MS.gene56996:CDS | 25.0% |
!! | TTTTATCTGTCACGAATTAT+GGG | - | chr5.1:55431776-55431795 | MS.gene56996:intron | 25.0% |
!!! | AACTGTTTTGATCATGAAAA+TGG | + | chr5.1:55429565-55429584 | None:intergenic | 25.0% |
!!! | AATTTGAAAAGAAAGGCATT+TGG | - | chr5.1:55428349-55428368 | MS.gene56996:intron | 25.0% |
!!! | ACTGTTTTGATCATGAAAAT+GGG | + | chr5.1:55429564-55429583 | None:intergenic | 25.0% |
!!! | AGAATAGTTGATAATGTTAG+CGG | + | chr5.1:55431966-55431985 | None:intergenic | 25.0% |
!!! | GTTATTTTATGAATGTGTGT+TGG | - | chr5.1:55428301-55428320 | MS.gene56996:intron | 25.0% |
!!! | GTTTTTGGATATAATTTTGG+TGG | - | chr5.1:55427428-55427447 | MS.gene56996:CDS | 25.0% |
!!! | TTTGGGTTTTAGTAATCATA+TGG | - | chr5.1:55428584-55428603 | MS.gene56996:intron | 25.0% |
AAACACAAATTGTGAGCATA+TGG | - | chr5.1:55431688-55431707 | MS.gene56996:intron | 30.0% | |
AAATACAACCTGATGAATCT+CGG | + | chr5.1:55429670-55429689 | None:intergenic | 30.0% | |
AACATCAAGATAGCAAATAG+AGG | + | chr5.1:55429129-55429148 | None:intergenic | 30.0% | |
AAGTTCTCATGTGATTTCAT+AGG | - | chr5.1:55430204-55430223 | MS.gene56996:intron | 30.0% | |
AATATAACGCCTCAAATTCT+TGG | + | chr5.1:55431415-55431434 | None:intergenic | 30.0% | |
ACAAACAATCTTATTCCTAC+AGG | + | chr5.1:55433193-55433212 | None:intergenic | 30.0% | |
ACAACAGAGTGAGTTATTTA+TGG | - | chr5.1:55427967-55427986 | MS.gene56996:CDS | 30.0% | |
ACATAAGATTATTTCAGGGA+AGG | + | chr5.1:55429922-55429941 | None:intergenic | 30.0% | |
ACATCAAGATAGCAAATAGA+GGG | + | chr5.1:55429128-55429147 | None:intergenic | 30.0% | |
ACTTATTGTTCTGTATTCAC+AGG | - | chr5.1:55433102-55433121 | MS.gene56996:intron | 30.0% | |
AGAATGTACAAGAACTAACA+TGG | + | chr5.1:55429644-55429663 | None:intergenic | 30.0% | |
ATTCAAATTTCTACTGCTGT+TGG | - | chr5.1:55432307-55432326 | MS.gene56996:intron | 30.0% | |
CAACAGAGTGAGTTATTTAT+GGG | - | chr5.1:55427968-55427987 | MS.gene56996:CDS | 30.0% | |
CAGAAAATGTATGACATACA+AGG | + | chr5.1:55430244-55430263 | None:intergenic | 30.0% | |
CCTATATAGAACTATTTGGA+TGG | - | chr5.1:55431126-55431145 | MS.gene56996:intron | 30.0% | |
CCTTTGACATCTCAAAAAAA+TGG | + | chr5.1:55429460-55429479 | None:intergenic | 30.0% | |
GAAAGAAGATTCTGTATTTG+TGG | - | chr5.1:55433129-55433148 | MS.gene56996:intron | 30.0% | |
GAATGAAAACATTAGAGAGT+TGG | - | chr5.1:55427743-55427762 | MS.gene56996:intron | 30.0% | |
GAGTAGATTGTTATGAATCA+TGG | - | chr5.1:55427843-55427862 | MS.gene56996:intron | 30.0% | |
GGTGAACACTACATTAAATT+GGG | - | chr5.1:55427367-55427386 | MS.gene56996:CDS | 30.0% | |
GGTGGTAATATTTCTTGTTA+TGG | - | chr5.1:55427446-55427465 | MS.gene56996:CDS | 30.0% | |
GTCATCAAAAGTTACTTGTA+AGG | - | chr5.1:55430657-55430676 | MS.gene56996:intron | 30.0% | |
GTTATGAATCATGGAATCAT+AGG | - | chr5.1:55427852-55427871 | MS.gene56996:intron | 30.0% | |
GTTGTAATTGATCAGTGAAA+TGG | + | chr5.1:55429035-55429054 | None:intergenic | 30.0% | |
TAATATAGACAACATCTACC+TGG | + | chr5.1:55431455-55431474 | None:intergenic | 30.0% | |
TACCATTAACTATGGTATGT+GGG | + | chr5.1:55430592-55430611 | None:intergenic | 30.0% | |
TATATCACATTCTTGGTTGA+GGG | + | chr5.1:55428880-55428899 | None:intergenic | 30.0% | |
TATCCAACTCATATATCTCA+AGG | + | chr5.1:55428169-55428188 | None:intergenic | 30.0% | |
TCATAGTTATAGCAAGGTTA+AGG | - | chr5.1:55430055-55430074 | MS.gene56996:intron | 30.0% | |
TCATATGGATCTAACATATG+GGG | - | chr5.1:55428599-55428618 | MS.gene56996:intron | 30.0% | |
TGCATATCTTTATCAAGAGA+AGG | + | chr5.1:55429772-55429791 | None:intergenic | 30.0% | |
TGGTGAACACTACATTAAAT+TGG | - | chr5.1:55427366-55427385 | MS.gene56996:CDS | 30.0% | |
TGTAATATAGATCAGATGGA+GGG | - | chr5.1:55428080-55428099 | MS.gene56996:intron | 30.0% | |
TTAAAGAACGACATTGCAAT+AGG | + | chr5.1:55431733-55431752 | None:intergenic | 30.0% | |
TTACCATTAACTATGGTATG+TGG | + | chr5.1:55430593-55430612 | None:intergenic | 30.0% | |
TTATATCACATTCTTGGTTG+AGG | + | chr5.1:55428881-55428900 | None:intergenic | 30.0% | |
TTATCAAGAGAAGGAATAAG+CGG | + | chr5.1:55429763-55429782 | None:intergenic | 30.0% | |
TTGAGATTAAAGAAGTCAAC+GGG | - | chr5.1:55432984-55433003 | MS.gene56996:CDS | 30.0% | |
TTTCTTGCAAATTGAAGCAT+TGG | - | chr5.1:55431642-55431661 | MS.gene56996:intron | 30.0% | |
! | AAATAAACAATTGGTGACTC+TGG | + | chr5.1:55432966-55432985 | None:intergenic | 30.0% |
! | ACACTAATTTTCTTTATCGC+AGG | + | chr5.1:55430177-55430196 | None:intergenic | 30.0% |
! | ATATATTGGGATTTTCGTCA+AGG | + | chr5.1:55432691-55432710 | None:intergenic | 30.0% |
! | ATTACAATGTTAGGGCTTTT+TGG | - | chr5.1:55428917-55428936 | MS.gene56996:intron | 30.0% |
! | ATTCCTGCTTTCTCTAAAAA+AGG | - | chr5.1:55430996-55431015 | MS.gene56996:intron | 30.0% |
! | CCATCCAAATAGTTCTATAT+AGG | + | chr5.1:55431129-55431148 | None:intergenic | 30.0% |
! | GTTTTATCTGTCACGAATTA+TGG | - | chr5.1:55431775-55431794 | MS.gene56996:intron | 30.0% |
! | GTTTTATGGAACAATTGGTA+AGG | - | chr5.1:55430814-55430833 | MS.gene56996:CDS | 30.0% |
! | TATTGAAGTTTTTCTCTTGG+TGG | - | chr5.1:55427568-55427587 | MS.gene56996:intron | 30.0% |
! | TCCAAATAGTTCTATATAGG+TGG | + | chr5.1:55431126-55431145 | None:intergenic | 30.0% |
!! | ACTTCTGCTTTAGAGAAATA+TGG | - | chr5.1:55430767-55430786 | MS.gene56996:intron | 30.0% |
!! | AGTGATAAGAGTATTCATGT+GGG | - | chr5.1:55427887-55427906 | MS.gene56996:CDS | 30.0% |
!! | ATAAGATTGTTTGTTTCTGC+AGG | - | chr5.1:55433199-55433218 | MS.gene56996:CDS | 30.0% |
!! | GTATTTTAAGCACAATGACA+TGG | - | chr5.1:55431341-55431360 | MS.gene56996:intron | 30.0% |
!! | TAAGATTGTTTGTTTCTGCA+GGG | - | chr5.1:55433200-55433219 | MS.gene56996:CDS | 30.0% |
!! | TACTGATTCATAAACCAACT+TGG | - | chr5.1:55432469-55432488 | MS.gene56996:intron | 30.0% |
!! | TAGTGATAAGAGTATTCATG+TGG | - | chr5.1:55427886-55427905 | MS.gene56996:CDS | 30.0% |
!!! | ATATCGGTTTCGTATTTTAC+TGG | - | chr5.1:55432151-55432170 | MS.gene56996:intron | 30.0% |
!!! | CCATTTTTTTGAGATGTCAA+AGG | - | chr5.1:55429457-55429476 | MS.gene56996:intron | 30.0% |
!!! | CTGAACATATGCTTTTTTTC+TGG | - | chr5.1:55428735-55428754 | MS.gene56996:intron | 30.0% |
!!! | GTATTTTTTAACAGGGATGA+AGG | - | chr5.1:55431267-55431286 | MS.gene56996:intron | 30.0% |
!!! | TATGCTTTTTTTCTGGTACT+TGG | - | chr5.1:55428742-55428761 | MS.gene56996:intron | 30.0% |
!!! | TCTTGATGTTGCATTTTTTG+TGG | - | chr5.1:55429139-55429158 | MS.gene56996:intron | 30.0% |
!!! | TGGTTGTCTTCTAACTTTTT+TGG | - | chr5.1:55429584-55429603 | MS.gene56996:intron | 30.0% |
AAAACTATAGCTCTTGCAGA+AGG | + | chr5.1:55427413-55427432 | None:intergenic | 35.0% | |
AAAATACACCAGAACAGCAT+TGG | - | chr5.1:55428975-55428994 | MS.gene56996:intron | 35.0% | |
AAATACACCAGAACAGCATT+GGG | - | chr5.1:55428976-55428995 | MS.gene56996:intron | 35.0% | |
AACATTGCTGTGTTATGGAA+AGG | - | chr5.1:55432728-55432747 | MS.gene56996:intron | 35.0% | |
AATCCTTATCCCACTAAATG+GGG | + | chr5.1:55427807-55427826 | None:intergenic | 35.0% | |
AATTGTTCCATAAAACCCAC+GGG | + | chr5.1:55430810-55430829 | None:intergenic | 35.0% | |
AGAACAACATTGCTGTGTTA+TGG | - | chr5.1:55432723-55432742 | MS.gene56996:intron | 35.0% | |
AGAACTAACATGGAACACTA+TGG | + | chr5.1:55429634-55429653 | None:intergenic | 35.0% | |
AGACCTTGAGATATATGAGT+TGG | - | chr5.1:55428163-55428182 | MS.gene56996:intron | 35.0% | |
AGATCTTATAACTGCTGCTA+TGG | - | chr5.1:55432363-55432382 | MS.gene56996:intron | 35.0% | |
AGGCATCTGAATCATTGAAA+AGG | - | chr5.1:55433245-55433264 | MS.gene56996:CDS | 35.0% | |
AGTTATTTATGGGAGTGAGT+TGG | - | chr5.1:55427978-55427997 | MS.gene56996:CDS | 35.0% | |
ATAAGCACACCAAGAATTTG+AGG | - | chr5.1:55431403-55431422 | MS.gene56996:intron | 35.0% | |
ATATCACATTCTTGGTTGAG+GGG | + | chr5.1:55428879-55428898 | None:intergenic | 35.0% | |
ATCGAAATGCTAATAGGCTT+TGG | - | chr5.1:55428429-55428448 | MS.gene56996:CDS | 35.0% | |
ATCTACCACTGTTATCAATC+CGG | + | chr5.1:55429190-55429209 | None:intergenic | 35.0% | |
ATCTATAACTCTTGCACTTC+CGG | + | chr5.1:55432422-55432441 | None:intergenic | 35.0% | |
ATCTTATTCCTACAGGCAAA+CGG | + | chr5.1:55433186-55433205 | None:intergenic | 35.0% | |
ATTCTTATCCGAGATTCATC+AGG | - | chr5.1:55429659-55429678 | MS.gene56996:CDS | 35.0% | |
CAATCCTTATCCCACTAAAT+GGG | + | chr5.1:55427808-55427827 | None:intergenic | 35.0% | |
CAATTGTTCCATAAAACCCA+CGG | + | chr5.1:55430811-55430830 | None:intergenic | 35.0% | |
CACAACAATTCTTACACGTT+CGG | + | chr5.1:55433048-55433067 | None:intergenic | 35.0% | |
CTCCATTCGAAACACAATAT+AGG | + | chr5.1:55431590-55431609 | None:intergenic | 35.0% | |
CTCCTATATTGTGTTTCGAA+TGG | - | chr5.1:55431585-55431604 | MS.gene56996:intron | 35.0% | |
CTGTAATATAGATCAGATGG+AGG | - | chr5.1:55428079-55428098 | MS.gene56996:intron | 35.0% | |
GAAAACCTACCAATATGCTA+GGG | + | chr5.1:55430017-55430036 | None:intergenic | 35.0% | |
GAATGCATTAACGGTAAATC+TGG | + | chr5.1:55432291-55432310 | None:intergenic | 35.0% | |
GATCACGTAAATCAGACATT+AGG | - | chr5.1:55430433-55430452 | MS.gene56996:intron | 35.0% | |
GATCTTATAACTGCTGCTAT+GGG | - | chr5.1:55432364-55432383 | MS.gene56996:intron | 35.0% | |
GATTACAGTTGAAGTGTAAG+TGG | + | chr5.1:55429007-55429026 | None:intergenic | 35.0% | |
GCCACCTATATAGAACTATT+TGG | - | chr5.1:55431122-55431141 | MS.gene56996:intron | 35.0% | |
GGCATCTGAATCATTGAAAA+GGG | - | chr5.1:55433246-55433265 | MS.gene56996:CDS | 35.0% | |
GTTAACTAGAGTTACCAAGT+TGG | + | chr5.1:55428029-55428048 | None:intergenic | 35.0% | |
GTTGAAAACACAGACATTAG+CGG | + | chr5.1:55432580-55432599 | None:intergenic | 35.0% | |
TAAAAGACCCTTGACAAACA+AGG | - | chr5.1:55427631-55427650 | MS.gene56996:CDS | 35.0% | |
TATGTTGTGCAGTTCAAAAG+TGG | - | chr5.1:55428487-55428506 | MS.gene56996:CDS | 35.0% | |
TCCATTTATGAAAGTAGCAG+CGG | + | chr5.1:55432769-55432788 | None:intergenic | 35.0% | |
TGACGAGTTATGTGATGAAT+GGG | - | chr5.1:55429729-55429748 | MS.gene56996:intron | 35.0% | |
TGATAACAGTGGTAGATAGT+GGG | - | chr5.1:55429193-55429212 | MS.gene56996:CDS | 35.0% | |
TGGTAGTCATAGTTATAGCA+AGG | - | chr5.1:55430049-55430068 | MS.gene56996:intron | 35.0% | |
TTGACGAGTTATGTGATGAA+TGG | - | chr5.1:55429728-55429747 | MS.gene56996:intron | 35.0% | |
TTGCTTCAGCAAACTATCTT+GGG | - | chr5.1:55430627-55430646 | MS.gene56996:intron | 35.0% | |
TTTGCTTCAGCAAACTATCT+TGG | - | chr5.1:55430626-55430645 | MS.gene56996:intron | 35.0% | |
! | CAGTGCTTCTAGAAAGATAA+AGG | + | chr5.1:55431317-55431336 | None:intergenic | 35.0% |
! | CATCATACCTTGTTTGTCAA+GGG | + | chr5.1:55427641-55427660 | None:intergenic | 35.0% |
! | CTTTTTCTTGAACACTGCTT+TGG | - | chr5.1:55430703-55430722 | MS.gene56996:intron | 35.0% |
! | TCTGCAAGAGCTATAGTTTT+TGG | - | chr5.1:55427413-55427432 | MS.gene56996:CDS | 35.0% |
! | TTGATAACAGTGGTAGATAG+TGG | - | chr5.1:55429192-55429211 | MS.gene56996:CDS | 35.0% |
! | TTGTTTGTCAAGGGTCTTTT+AGG | + | chr5.1:55427632-55427651 | None:intergenic | 35.0% |
! | TTTCTTACTTTCGGTTTTGC+TGG | - | chr5.1:55433078-55433097 | MS.gene56996:intron | 35.0% |
!! | AAATATGGTGTTGGTTCATG+TGG | - | chr5.1:55430782-55430801 | MS.gene56996:intron | 35.0% |
!! | CAAAGGTGTCCAATGAAAAT+AGG | - | chr5.1:55429474-55429493 | MS.gene56996:intron | 35.0% |
!! | GCTTTAGAGAAATATGGTGT+TGG | - | chr5.1:55430773-55430792 | MS.gene56996:intron | 35.0% |
!! | GGCATTCATCTACTACTTTT+TGG | + | chr5.1:55429529-55429548 | None:intergenic | 35.0% |
!! | GTTTTGATCATGAAAATGGG+TGG | + | chr5.1:55429561-55429580 | None:intergenic | 35.0% |
!! | TATTTTCAAGGCGAAGTGAT+TGG | - | chr5.1:55432520-55432539 | MS.gene56996:intron | 35.0% |
!! | TTTTTCTGGTACTTGGAAAC+AGG | - | chr5.1:55428749-55428768 | MS.gene56996:intron | 35.0% |
!!! | TCTCCTTTTTTAGAGAAAGC+AGG | + | chr5.1:55431002-55431021 | None:intergenic | 35.0% |
AAAACACAGACATTAGCGGA+GGG | + | chr5.1:55432576-55432595 | None:intergenic | 40.0% | |
AAGTCCTATCCCACTATGTA+GGG | + | chr5.1:55428244-55428263 | None:intergenic | 40.0% | |
AATTTCTTATGCAGTGCTGC+TGG | - | chr5.1:55430566-55430585 | MS.gene56996:intron | 40.0% | |
ACAAATGACACTACCATACC+TGG | + | chr5.1:55432447-55432466 | None:intergenic | 40.0% | |
ACTATGACTACCATGTCAGA+AGG | + | chr5.1:55430042-55430061 | None:intergenic | 40.0% | |
ACTTGTCAACTTCACTGCTA+TGG | - | chr5.1:55429947-55429966 | MS.gene56996:intron | 40.0% | |
AGAGTTGGAGTAGAACATTG+TGG | - | chr5.1:55427758-55427777 | MS.gene56996:intron | 40.0% | |
AGTTCTATATAGGTGGCGTA+TGG | + | chr5.1:55431119-55431138 | None:intergenic | 40.0% | |
ATGTACCGAAAATCTCCGTT+TGG | - | chr5.1:55432244-55432263 | MS.gene56996:intron | 40.0% | |
ATTGTTCCATAAAACCCACG+GGG | + | chr5.1:55430809-55430828 | None:intergenic | 40.0% | |
CACAGTCAAGATGTACATCT+GGG | + | chr5.1:55430899-55430918 | None:intergenic | 40.0% | |
CATTAACGGTAAATCTGGTG+GGG | + | chr5.1:55432286-55432305 | None:intergenic | 40.0% | |
CCAATCCTTATCCCACTAAA+TGG | + | chr5.1:55427809-55427828 | None:intergenic | 40.0% | |
CCATTTAGTGGGATAAGGAT+TGG | - | chr5.1:55427806-55427825 | MS.gene56996:intron | 40.0% | |
GAGTTATAGATCACCAGGTA+TGG | - | chr5.1:55432431-55432450 | MS.gene56996:intron | 40.0% | |
GCAAACTATCTTGGGCTTAT+AGG | - | chr5.1:55430635-55430654 | MS.gene56996:intron | 40.0% | |
GCATTAACGGTAAATCTGGT+GGG | + | chr5.1:55432287-55432306 | None:intergenic | 40.0% | |
GGAAAACCTACCAATATGCT+AGG | + | chr5.1:55430018-55430037 | None:intergenic | 40.0% | |
GGCTTCAGCTGTTGTTAATT+TGG | - | chr5.1:55427346-55427365 | MS.gene56996:CDS | 40.0% | |
GTACACTTGGAAATCCAAGT+TGG | + | chr5.1:55432486-55432505 | None:intergenic | 40.0% | |
GTCATGGTATCAAAGCCTAT+CGG | + | chr5.1:55431889-55431908 | None:intergenic | 40.0% | |
TACAGTTGAAGTGTAAGTGG+AGG | + | chr5.1:55429004-55429023 | None:intergenic | 40.0% | |
TAGGATTACAGTTTGCACTC+TGG | - | chr5.1:55430452-55430471 | MS.gene56996:intron | 40.0% | |
TAGTTCCACATCGGATAGTA+AGG | + | chr5.1:55431925-55431944 | None:intergenic | 40.0% | |
TCACAGTCAAGATGTACATC+TGG | + | chr5.1:55430900-55430919 | None:intergenic | 40.0% | |
TCATGGTATCAAAGCCTATC+GGG | + | chr5.1:55431888-55431907 | None:intergenic | 40.0% | |
TGATTGTGATTGTGTTCTGC+AGG | - | chr5.1:55432330-55432349 | MS.gene56996:intron | 40.0% | |
TGCAAGAGTTATAGATCACC+AGG | - | chr5.1:55432426-55432445 | MS.gene56996:intron | 40.0% | |
TGCATTAACGGTAAATCTGG+TGG | + | chr5.1:55432288-55432307 | None:intergenic | 40.0% | |
TGTACCGAAAATCTCCGTTT+GGG | - | chr5.1:55432245-55432264 | MS.gene56996:intron | 40.0% | |
TTCAGAGTCTGATCTTCACA+AGG | - | chr5.1:55433225-55433244 | MS.gene56996:CDS | 40.0% | |
TTGCTGTGTTATGGAAAGGT+AGG | - | chr5.1:55432732-55432751 | MS.gene56996:intron | 40.0% | |
TTGTGGCGTAATTTGATCCA+TGG | - | chr5.1:55427775-55427794 | MS.gene56996:intron | 40.0% | |
! | CTATTCCGGATTGATAACAG+TGG | - | chr5.1:55429182-55429201 | MS.gene56996:CDS | 40.0% |
! | GAAAATATGCTCCTGACTTG+TGG | - | chr5.1:55428691-55428710 | MS.gene56996:intron | 40.0% |
! | GCATCATACCTTGTTTGTCA+AGG | + | chr5.1:55427642-55427661 | None:intergenic | 40.0% |
! | GGTGATTACGTTTTCTCTTG+TGG | - | chr5.1:55429815-55429834 | MS.gene56996:CDS | 40.0% |
! | TTTGTCAAGGGTCTTTTAGG+AGG | + | chr5.1:55427629-55427648 | None:intergenic | 40.0% |
!! | ACCAAGTTGGTTAGGTAGTT+AGG | + | chr5.1:55428016-55428035 | None:intergenic | 40.0% |
!! | ACCGCTGCTACTTTCATAAA+TGG | - | chr5.1:55432765-55432784 | MS.gene56996:intron | 40.0% |
!! | ATATGGTGTTGCTGTTAGAC+TGG | - | chr5.1:55431705-55431724 | MS.gene56996:intron | 40.0% |
!! | ATGTTAGGGCTTTTTGGTCT+TGG | - | chr5.1:55428923-55428942 | MS.gene56996:intron | 40.0% |
!! | CAATATTTTCAAGCAGGCGT+AGG | + | chr5.1:55433025-55433044 | None:intergenic | 40.0% |
!! | CCAAGTTGGTTAGGTAGTTA+GGG | + | chr5.1:55428015-55428034 | None:intergenic | 40.0% |
!! | CGTGGGTTTTATGGAACAAT+TGG | - | chr5.1:55430809-55430828 | MS.gene56996:intron | 40.0% |
!! | CTAGAGTTACCAAGTTGGTT+AGG | + | chr5.1:55428024-55428043 | None:intergenic | 40.0% |
!! | GTTCGGCAATATTTTCAAGC+AGG | + | chr5.1:55433031-55433050 | None:intergenic | 40.0% |
!!! | GGTTGCTGCATTAGTTTTGT+AGG | - | chr5.1:55433267-55433286 | MS.gene56996:CDS | 40.0% |
AACTAAATCCCACCGAGTGT+TGG | - | chr5.1:55431940-55431959 | MS.gene56996:intron | 45.0% | |
ACAAGACTGCCATTGTAGTG+GGG | + | chr5.1:55430105-55430124 | None:intergenic | 45.0% | |
ACTACGCTCGTCTTCTATTC+CGG | - | chr5.1:55429168-55429187 | MS.gene56996:intron | 45.0% | |
ACTATGTAGGGTTGACTGCA+TGG | + | chr5.1:55428232-55428251 | None:intergenic | 45.0% | |
AGAGAAGGAATAAGCGGTTG+CGG | + | chr5.1:55429757-55429776 | None:intergenic | 45.0% | |
AGAGGTCTCACTGAACACTA+TGG | - | chr5.1:55432212-55432231 | MS.gene56996:intron | 45.0% | |
AGTTAAGTCGCAAGAGGCAA+AGG | - | chr5.1:55428104-55428123 | MS.gene56996:intron | 45.0% | |
ATACCATGACACGAAAGTCG+AGG | - | chr5.1:55431899-55431918 | MS.gene56996:intron | 45.0% | |
ATCTGTCACGAATTATGGGC+CGG | - | chr5.1:55431780-55431799 | MS.gene56996:intron | 45.0% | |
ATGACTACCATGTCAGAAGG+TGG | + | chr5.1:55430039-55430058 | None:intergenic | 45.0% | |
ATGAGCCCTAGCATATTGGT+AGG | - | chr5.1:55430009-55430028 | MS.gene56996:CDS | 45.0% | |
ATGCAGTCAACCCTACATAG+TGG | - | chr5.1:55428231-55428250 | MS.gene56996:CDS | 45.0% | |
ATGGCAAAAGTCCACAAGTC+AGG | + | chr5.1:55428705-55428724 | None:intergenic | 45.0% | |
ATTGCAGCGCTTGCAAGATA+TGG | + | chr5.1:55432653-55432672 | None:intergenic | 45.0% | |
CAAGTCCTATCCCACTATGT+AGG | + | chr5.1:55428245-55428264 | None:intergenic | 45.0% | |
CACAAGACTGCCATTGTAGT+GGG | + | chr5.1:55430106-55430125 | None:intergenic | 45.0% | |
CATCAAGTATGCAGTCGACA+TGG | + | chr5.1:55429386-55429405 | None:intergenic | 45.0% | |
CCCTAACTACCTAACCAACT+TGG | - | chr5.1:55428012-55428031 | MS.gene56996:intron | 45.0% | |
CTATAGCCTATAACGGCTAG+GGG | + | chr5.1:55428856-55428875 | None:intergenic | 45.0% | |
CTGGATGAGAGCAACTCATT+TGG | - | chr5.1:55432170-55432189 | MS.gene56996:intron | 45.0% | |
CTTATCCCACTAAATGGGGT+CGG | + | chr5.1:55427803-55427822 | None:intergenic | 45.0% | |
GAAAACACAGACATTAGCGG+AGG | + | chr5.1:55432577-55432596 | None:intergenic | 45.0% | |
GAAAATGGGTGGACAGACAA+AGG | + | chr5.1:55429550-55429569 | None:intergenic | 45.0% | |
GCTATAGCCTATAACGGCTA+GGG | + | chr5.1:55428857-55428876 | None:intergenic | 45.0% | |
GGCCCACATACCATAGTTAA+TGG | - | chr5.1:55430587-55430606 | MS.gene56996:intron | 45.0% | |
GTTGGAAATACCAGGCTTCA+CGG | - | chr5.1:55432929-55432948 | MS.gene56996:intron | 45.0% | |
TAATGTTAGCGGCCAACACT+CGG | + | chr5.1:55431955-55431974 | None:intergenic | 45.0% | |
TAGGATGAGCCCTAGCATAT+TGG | - | chr5.1:55430005-55430024 | MS.gene56996:CDS | 45.0% | |
TGAGGGGCTATAGCCTATAA+CGG | + | chr5.1:55428863-55428882 | None:intergenic | 45.0% | |
TGCAGTCAACCCTACATAGT+GGG | - | chr5.1:55428232-55428251 | MS.gene56996:CDS | 45.0% | |
TGGTGAACATGCAGCTCTAT+GGG | + | chr5.1:55429509-55429528 | None:intergenic | 45.0% | |
TGTATGCACACACACCCAAA+CGG | + | chr5.1:55432262-55432281 | None:intergenic | 45.0% | |
TTGGTGAACATGCAGCTCTA+TGG | + | chr5.1:55429510-55429529 | None:intergenic | 45.0% | |
TTGTGATGATTGAGGGAGAC+TGG | - | chr5.1:55430342-55430361 | MS.gene56996:intron | 45.0% | |
! | AACACTATTGCTGCTTGCTC+TGG | - | chr5.1:55431753-55431772 | MS.gene56996:intron | 45.0% |
! | AGCAGGAATAGCACTGAACA+TGG | + | chr5.1:55430985-55431004 | None:intergenic | 45.0% |
! | AGGAATAGCACTGAACATGG+TGG | + | chr5.1:55430982-55431001 | None:intergenic | 45.0% |
! | AGGTTTTCCACCTTCTGACA+TGG | - | chr5.1:55430029-55430048 | MS.gene56996:CDS | 45.0% |
! | CACACCCAAACGGAGATTTT+CGG | + | chr5.1:55432252-55432271 | None:intergenic | 45.0% |
! | CGGAGATTTTCGGTACATAC+TGG | + | chr5.1:55432242-55432261 | None:intergenic | 45.0% |
! | CTACATAGTGGGATAGGACT+TGG | - | chr5.1:55428243-55428262 | MS.gene56996:CDS | 45.0% |
! | GGTGGGATTTAGTTCCACAT+CGG | + | chr5.1:55431934-55431953 | None:intergenic | 45.0% |
! | TCAACCCTACATAGTGGGAT+AGG | - | chr5.1:55428237-55428256 | MS.gene56996:CDS | 45.0% |
! | TTTGGTGTGCTTGGAAGTTC+TGG | - | chr5.1:55432188-55432207 | MS.gene56996:intron | 45.0% |
!! | AGCAACTCATTTGGTGTGCT+TGG | - | chr5.1:55432179-55432198 | MS.gene56996:intron | 45.0% |
ACAGAAGGAGGATTCTGCAC+CGG | - | chr5.1:55432400-55432419 | MS.gene56996:intron | 50.0% | |
ATTGGCTACTGCAGGGTTGT+TGG | - | chr5.1:55432911-55432930 | MS.gene56996:intron | 50.0% | |
CAAGATGTACATCTGGGCAG+AGG | + | chr5.1:55430893-55430912 | None:intergenic | 50.0% | |
CGACCCCATTTAGTGGGATA+AGG | - | chr5.1:55427801-55427820 | MS.gene56996:intron | 50.0% | |
CGTAATCACCTTTCCAGCAC+TGG | + | chr5.1:55429805-55429824 | None:intergenic | 50.0% | |
GAGAAGGAATAAGCGGTTGC+GGG | + | chr5.1:55429756-55429775 | None:intergenic | 50.0% | |
GAGGGTAGTTAAGTCGCAAG+AGG | - | chr5.1:55428098-55428117 | MS.gene56996:intron | 50.0% | |
GCACAAGACTGCCATTGTAG+TGG | + | chr5.1:55430107-55430126 | None:intergenic | 50.0% | |
GCAGGGTTGTTGGAAATACC+AGG | - | chr5.1:55432921-55432940 | MS.gene56996:intron | 50.0% | |
GGAATAGAAGACGAGCGTAG+TGG | + | chr5.1:55429169-55429188 | None:intergenic | 50.0% | |
GGCTATAGCCTATAACGGCT+AGG | + | chr5.1:55428858-55428877 | None:intergenic | 50.0% | |
GTCCACTGGGGAATACAGAA+TGG | - | chr5.1:55431291-55431310 | MS.gene56996:intron | 50.0% | |
TGCTGCTATGGGACATGCAT+TGG | - | chr5.1:55432375-55432394 | MS.gene56996:intron | 50.0% | |
TGTTGTCGAAGCTCTCTACC+AGG | - | chr5.1:55431434-55431453 | MS.gene56996:intron | 50.0% | |
TTCTGCATCGTCCATGCTTC+AGG | + | chr5.1:55431851-55431870 | None:intergenic | 50.0% | |
TTGCAGCGATTGAGTAGCTC+TGG | - | chr5.1:55432602-55432621 | MS.gene56996:intron | 50.0% | |
! | AATCACCTTTCCAGCACTGG+TGG | + | chr5.1:55429802-55429821 | None:intergenic | 50.0% |
! | ACAATGGCAGTCTTGTGCAC+TGG | - | chr5.1:55430109-55430128 | MS.gene56996:intron | 50.0% |
! | ATGAACCACCAGTGCTGGAA+AGG | - | chr5.1:55429794-55429813 | MS.gene56996:intron | 50.0% |
! | ATTGTAGTGGGGTCCAGGTA+GGG | + | chr5.1:55430094-55430113 | None:intergenic | 50.0% |
!! | GAGATGCATTGGCTACTGCA+GGG | - | chr5.1:55432904-55432923 | MS.gene56996:intron | 50.0% |
!! | GTGCTTGGAAGTTCTGGAAG+AGG | - | chr5.1:55432194-55432213 | MS.gene56996:intron | 50.0% |
!! | TGAGATGCATTGGCTACTGC+AGG | - | chr5.1:55432903-55432922 | MS.gene56996:intron | 50.0% |
AAGCAGCCCCTAGCCGTTAT+AGG | - | chr5.1:55428847-55428866 | MS.gene56996:intron | 55.0% | |
AAGCCTATCGGGTCCATCGT+TGG | + | chr5.1:55431877-55431896 | None:intergenic | 55.0% | |
ACAGGGATGAAGGAGTCCAC+TGG | - | chr5.1:55431277-55431296 | MS.gene56996:intron | 55.0% | |
AGCCTATCGGGTCCATCGTT+GGG | + | chr5.1:55431876-55431895 | None:intergenic | 55.0% | |
AGGCCTCGACTTTCGTGTCA+TGG | + | chr5.1:55431905-55431924 | None:intergenic | 55.0% | |
AGGGATGAAGGAGTCCACTG+GGG | - | chr5.1:55431279-55431298 | MS.gene56996:intron | 55.0% | |
ATGGAGCCGACCCCATTTAG+TGG | - | chr5.1:55427794-55427813 | MS.gene56996:intron | 55.0% | |
CAGGGATGAAGGAGTCCACT+GGG | - | chr5.1:55431278-55431297 | MS.gene56996:intron | 55.0% | |
CGAGGCCTTACTATCCGATG+TGG | - | chr5.1:55431917-55431936 | MS.gene56996:intron | 55.0% | |
CGATGCAGAAAGCCCAACGA+TGG | - | chr5.1:55431861-55431880 | MS.gene56996:intron | 55.0% | |
CTACCTGGACCCCACTACAA+TGG | - | chr5.1:55430093-55430112 | MS.gene56996:intron | 55.0% | |
CTGTCAGTTCAGACCCTACC+TGG | - | chr5.1:55430078-55430097 | MS.gene56996:intron | 55.0% | |
GCACTATGAACCACCAGTGC+TGG | - | chr5.1:55429789-55429808 | MS.gene56996:intron | 55.0% | |
GCAGCGCTTGCAAGATATGG+AGG | + | chr5.1:55432650-55432669 | None:intergenic | 55.0% | |
GGCCATTCTGTATTCCCCAG+TGG | + | chr5.1:55431296-55431315 | None:intergenic | 55.0% | |
GGTGCAGAATCCTCCTTCTG+TGG | + | chr5.1:55432401-55432420 | None:intergenic | 55.0% | |
GTCCATGCTTCAGGCCCATT+GGG | + | chr5.1:55431842-55431861 | None:intergenic | 55.0% | |
TATAACGGCTAGGGGCTGCT+TGG | + | chr5.1:55428848-55428867 | None:intergenic | 55.0% | |
TGGAGCCGACCCCATTTAGT+GGG | - | chr5.1:55427795-55427814 | MS.gene56996:intron | 55.0% | |
TTGGTTCATGTGGTCCCCGT+GGG | - | chr5.1:55430792-55430811 | MS.gene56996:intron | 55.0% | |
! | ACTAAATGGGGTCGGCTCCA+TGG | + | chr5.1:55427795-55427814 | None:intergenic | 55.0% |
! | CATGCATTGGCCACAGAAGG+AGG | - | chr5.1:55432388-55432407 | MS.gene56996:intron | 55.0% |
! | CATTGTAGTGGGGTCCAGGT+AGG | + | chr5.1:55430095-55430114 | None:intergenic | 55.0% |
! | GGACATGCATTGGCCACAGA+AGG | - | chr5.1:55432385-55432404 | MS.gene56996:intron | 55.0% |
! | TGTGGTCCCCGTGGGTTTTA+TGG | - | chr5.1:55430800-55430819 | MS.gene56996:intron | 55.0% |
!! | CTGAAGCACTGAAGCGTGAG+GGG | + | chr5.1:55431814-55431833 | None:intergenic | 55.0% |
!! | GACAAGTGCCGTTTGCCTGT+AGG | - | chr5.1:55433175-55433194 | MS.gene56996:intron | 55.0% |
!! | GCTGAAGCACTGAAGCGTGA+GGG | + | chr5.1:55431815-55431834 | None:intergenic | 55.0% |
!! | TGAAGCACTGAAGCGTGAGG+GGG | + | chr5.1:55431813-55431832 | None:intergenic | 55.0% |
AGCCCAACGATGGACCCGAT+AGG | - | chr5.1:55431871-55431890 | MS.gene56996:intron | 60.0% | |
AGCCCAATGGGCCTGAAGCA+TGG | - | chr5.1:55431837-55431856 | MS.gene56996:intron | 60.0% | |
AGTGCTTCAGCCCAGCCCAA+TGG | - | chr5.1:55431824-55431843 | MS.gene56996:intron | 60.0% | |
ATGCTTCAGGCCCATTGGGC+TGG | + | chr5.1:55431838-55431857 | None:intergenic | 60.0% | |
CGTCCATGCTTCAGGCCCAT+TGG | + | chr5.1:55431843-55431862 | None:intergenic | 60.0% | |
GGAGGAGCCCAATGCTGTTC+TGG | + | chr5.1:55428986-55429005 | None:intergenic | 60.0% | |
GTGCTTCAGCCCAGCCCAAT+GGG | - | chr5.1:55431825-55431844 | MS.gene56996:intron | 60.0% | |
GTTAGCGGCCAACACTCGGT+GGG | + | chr5.1:55431951-55431970 | None:intergenic | 60.0% | |
TGACTCGCAACCGTGAAGCC+TGG | + | chr5.1:55432942-55432961 | None:intergenic | 60.0% | |
TGCTTCAGGCCCATTGGGCT+GGG | + | chr5.1:55431837-55431856 | None:intergenic | 60.0% | |
TGTTAGCGGCCAACACTCGG+TGG | + | chr5.1:55431952-55431971 | None:intergenic | 60.0% | |
! | CTGCCATTGTAGTGGGGTCC+AGG | + | chr5.1:55430099-55430118 | None:intergenic | 60.0% |
! | GTTGGTTCATGTGGTCCCCG+TGG | - | chr5.1:55430791-55430810 | MS.gene56996:intron | 60.0% |
!! | AGCGTGAGGGGGAGTGTTAC+CGG | + | chr5.1:55431802-55431821 | None:intergenic | 60.0% |
!! | GGCTGAAGCACTGAAGCGTG+AGG | + | chr5.1:55431816-55431835 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 55427341 | 55433288 | 55427341 | ID=MS.gene56996 |
chr5.1 | mRNA | 55427341 | 55433288 | 55427341 | ID=MS.gene56996.t1;Parent=MS.gene56996 |
chr5.1 | exon | 55433180 | 55433288 | 55433180 | ID=MS.gene56996.t1.exon1;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55433180 | 55433288 | 55433180 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55432977 | 55433071 | 55432977 | ID=MS.gene56996.t1.exon2;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55432977 | 55433071 | 55432977 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55430814 | 55430905 | 55430814 | ID=MS.gene56996.t1.exon3;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55430814 | 55430905 | 55430814 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55429956 | 55430049 | 55429956 | ID=MS.gene56996.t1.exon4;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55429956 | 55430049 | 55429956 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55429799 | 55429871 | 55429799 | ID=MS.gene56996.t1.exon5;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55429799 | 55429871 | 55429799 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55429596 | 55429728 | 55429596 | ID=MS.gene56996.t1.exon6;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55429596 | 55429728 | 55429596 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55429174 | 55429348 | 55429174 | ID=MS.gene56996.t1.exon7;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55429174 | 55429348 | 55429174 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55428388 | 55428528 | 55428388 | ID=MS.gene56996.t1.exon8;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55428388 | 55428528 | 55428388 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55428182 | 55428277 | 55428182 | ID=MS.gene56996.t1.exon9;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55428182 | 55428277 | 55428182 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55427880 | 55428021 | 55427880 | ID=MS.gene56996.t1.exon10;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55427880 | 55428021 | 55427880 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55427577 | 55427704 | 55427577 | ID=MS.gene56996.t1.exon11;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55427577 | 55427704 | 55427577 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
chr5.1 | exon | 55427341 | 55427505 | 55427341 | ID=MS.gene56996.t1.exon12;Parent=MS.gene56996.t1 |
chr5.1 | CDS | 55427341 | 55427505 | 55427341 | ID=cds.MS.gene56996.t1;Parent=MS.gene56996.t1 |
Gene Sequence |
Protein sequence |