Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57072.t1 | XP_013450839.1 | 66.9 | 562 | 8 | 1 | 1 | 384 | 1 | 562 | 6.00E-191 | 676.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57072.t1 | Q8VZ10 | 31.8 | 157 | 90 | 6 | 87 | 234 | 740 | 888 | 1.4e-07 | 58.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57072.t1 | A0A072U590 | 66.9 | 562 | 8 | 1 | 1 | 384 | 1 | 562 | 4.3e-191 | 676.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058909 | MS.gene57072 | 0.815615 | 8.44E-52 | -1.69E-46 |
| MS.gene058912 | MS.gene57072 | 0.807571 | 4.74E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57072.t1 | MTR_6g007720 | 97.668 | 343 | 8 | 0 | 1 | 343 | 1 | 343 | 0.0 | 686 |
| MS.gene57072.t1 | MTR_6g007720 | 100.000 | 41 | 0 | 0 | 344 | 384 | 522 | 562 | 8.02e-21 | 94.7 |
| MS.gene57072.t1 | MTR_8g063760 | 61.012 | 336 | 112 | 6 | 12 | 345 | 19 | 337 | 2.77e-133 | 392 |
| MS.gene57072.t1 | MTR_5g034750 | 60.000 | 330 | 113 | 4 | 22 | 345 | 19 | 335 | 3.18e-132 | 390 |
| MS.gene57072.t1 | MTR_2g075860 | 43.408 | 311 | 146 | 8 | 7 | 311 | 10 | 296 | 3.69e-75 | 241 |
| MS.gene57072.t1 | MTR_8g058630 | 59.677 | 124 | 48 | 1 | 120 | 243 | 13 | 134 | 3.18e-47 | 158 |
| MS.gene57072.t1 | MTR_5g034550 | 50.000 | 166 | 54 | 3 | 119 | 273 | 2 | 149 | 1.97e-42 | 145 |
| MS.gene57072.t1 | MTR_8g063700 | 41.111 | 180 | 101 | 3 | 65 | 243 | 26 | 201 | 1.67e-33 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57072.t1 | AT1G70280 | 61.755 | 319 | 101 | 5 | 28 | 345 | 28 | 326 | 8.40e-126 | 372 |
| MS.gene57072.t1 | AT1G23880 | 56.716 | 335 | 125 | 6 | 7 | 339 | 65 | 381 | 1.23e-119 | 357 |
| MS.gene57072.t1 | AT5G14890 | 55.685 | 343 | 131 | 8 | 19 | 354 | 21 | 349 | 1.07e-118 | 353 |
| MS.gene57072.t1 | AT1G70280 | 63.345 | 281 | 85 | 4 | 66 | 345 | 1 | 264 | 1.58e-114 | 341 |
| MS.gene57072.t1 | AT1G23880 | 60.584 | 274 | 91 | 4 | 66 | 339 | 1 | 257 | 2.25e-105 | 317 |
| MS.gene57072.t1 | AT3G14860 | 44.755 | 286 | 136 | 6 | 1 | 284 | 13 | 278 | 1.89e-74 | 239 |
| MS.gene57072.t1 | AT3G14860 | 44.755 | 286 | 136 | 6 | 1 | 284 | 13 | 278 | 2.60e-74 | 239 |
| MS.gene57072.t1 | AT1G23890 | 43.478 | 184 | 98 | 4 | 67 | 248 | 23 | 202 | 2.88e-41 | 146 |
| MS.gene57072.t1 | AT1G23890 | 42.935 | 184 | 99 | 4 | 67 | 248 | 23 | 202 | 5.21e-40 | 146 |
Find 81 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCCAGATGGTGAATATT+TGG | 0.159273 | 6.2:+3398793 | MS.gene57072:CDS |
| ATATTATGGTGACTAAATTT+TGG | 0.159816 | 6.2:-3402356 | None:intergenic |
| TTGTTTCTTCTCTTCTTAAA+TGG | 0.172191 | 6.2:+3398416 | MS.gene57072:CDS |
| TCATCTTCATTAGGGATTAA+AGG | 0.208414 | 6.2:-3401672 | None:intergenic |
| AAAGGAGGCCTAACTGATTT+AGG | 0.228168 | 6.2:-3401654 | None:intergenic |
| CATTGCAGACACATTGAATA+TGG | 0.250525 | 6.2:+3400195 | MS.gene57072:CDS |
| CTACCTGGTACTTTAACTTT+TGG | 0.252864 | 6.2:-3398460 | None:intergenic |
| GAAGATCCAGCAAGCAGTTT+TGG | 0.261360 | 6.2:-3400079 | None:intergenic |
| TTAACCTAGGTCGAATATTA+TGG | 0.266682 | 6.2:-3402370 | None:intergenic |
| TCATCAACTGTAAGCCCTTT+AGG | 0.275718 | 6.2:-3400157 | None:intergenic |
| CATCAACATGGCCTCCTAAT+TGG | 0.286978 | 6.2:-3400857 | None:intergenic |
| TAGAAGTAGTTGCTCTCTTT+TGG | 0.288214 | 6.2:+3400929 | MS.gene57072:CDS |
| CTTCTCTTCTTAAATGGATA+TGG | 0.289356 | 6.2:+3398422 | MS.gene57072:CDS |
| AGATGGTGAATATTTGGTTT+TGG | 0.301551 | 6.2:+3398799 | MS.gene57072:CDS |
| TCTCAAATTCATCTTCATTA+GGG | 0.302840 | 6.2:-3401680 | None:intergenic |
| TTCTCAAATTCATCTTCATT+AGG | 0.311852 | 6.2:-3401681 | None:intergenic |
| GGATCTTCTGAGGGGTATAT+TGG | 0.321417 | 6.2:+3400094 | MS.gene57072:CDS |
| AATGTGGAAACAATATTTGA+TGG | 0.330878 | 6.2:+3398734 | MS.gene57072:CDS |
| AGGATTCAAGGGCACATATA+AGG | 0.336115 | 6.2:+3401592 | MS.gene57072:intron |
| GTGATAAAGGCTGTGGATTA+TGG | 0.344089 | 6.2:+3402329 | MS.gene57072:CDS |
| GAAGGCTTCTTTGTTTCTCT+TGG | 0.356177 | 6.2:+3401711 | MS.gene57072:CDS |
| ATAGCTGCTCTTGTTTCTGC+TGG | 0.364729 | 6.2:+3401181 | MS.gene57072:CDS |
| TTCATCACTGATCTTTCTAA+TGG | 0.373047 | 6.2:-3400218 | None:intergenic |
| ACGTGAGGCTATGGTGATAA+AGG | 0.389534 | 6.2:+3402316 | MS.gene57072:CDS |
| AGTGAACTCAAGTTCATCAA+TGG | 0.414203 | 6.2:+3401743 | MS.gene57072:CDS |
| ATATGTTAGCATTACTTAAG+AGG | 0.422314 | 6.2:+3401215 | MS.gene57072:CDS |
| AAAACCAAATATTCACCATC+TGG | 0.435104 | 6.2:-3398797 | None:intergenic |
| TGACATGCAGAAATTGTTAC+TGG | 0.436787 | 6.2:+3398379 | MS.gene57072:intron |
| AGCAAACCAAAACTGCTTGC+TGG | 0.444843 | 6.2:+3400073 | MS.gene57072:CDS |
| GGGTATATTGGACACATAGA+TGG | 0.445127 | 6.2:+3400106 | MS.gene57072:CDS |
| GAAAACTTTGCATCCTCACT+TGG | 0.448935 | 6.2:-3400882 | None:intergenic |
| CGACCTAGGTTAAATTATGT+TGG | 0.467022 | 6.2:+3402380 | MS.gene57072:CDS |
| CAATTAGGAGGCCATGTTGA+TGG | 0.476101 | 6.2:+3400858 | MS.gene57072:CDS |
| ATAGGGGTAACAACCATTGC+AGG | 0.479173 | 6.2:+3400819 | MS.gene57072:intron |
| GTGAACTCAAGTTCATCAAT+GGG | 0.484957 | 6.2:+3401744 | MS.gene57072:CDS |
| TGGTTCAGTCTTGCATCTCT+AGG | 0.485332 | 6.2:-3400133 | None:intergenic |
| ATATTTGATGGACGTAAGCT+TGG | 0.486395 | 6.2:+3398746 | MS.gene57072:CDS |
| AGGGCACATATAAGGACAAA+AGG | 0.486828 | 6.2:+3401600 | MS.gene57072:CDS |
| TATGACAATAGTTTCCCCTT+AGG | 0.487484 | 6.2:+3401044 | MS.gene57072:CDS |
| GGAAATTTACATCTTGACAT+TGG | 0.502050 | 6.2:-3398857 | None:intergenic |
| CAAGACTGAACCATCCTAAA+GGG | 0.514153 | 6.2:+3400143 | MS.gene57072:CDS |
| TTTCACTTACTTGCAGGTGG+TGG | 0.525688 | 6.2:-3398287 | None:intergenic |
| GGTGGTGGTGTAGCTGAAGT+TGG | 0.538593 | 6.2:-3398272 | None:intergenic |
| GCAAGACTGAACCATCCTAA+AGG | 0.538732 | 6.2:+3400142 | MS.gene57072:CDS |
| GGCCTAACTGATTTAGGAGG+AGG | 0.539849 | 6.2:-3401648 | None:intergenic |
| GGCCTCCTCCTAAATCAGTT+AGG | 0.542090 | 6.2:+3401646 | MS.gene57072:CDS |
| ATTAGAAAGATCAGTGATGA+AGG | 0.542470 | 6.2:+3400220 | MS.gene57072:CDS |
| GAATTTGAGAAACATGATGA+AGG | 0.545619 | 6.2:+3401693 | MS.gene57072:CDS |
| CTGCTTGCTGGATCTTCTGA+GGG | 0.553364 | 6.2:+3400085 | MS.gene57072:CDS |
| TTGTTTCACTTACTTGCAGG+TGG | 0.562484 | 6.2:-3398290 | None:intergenic |
| ACTGCTTGCTGGATCTTCTG+AGG | 0.569083 | 6.2:+3400084 | MS.gene57072:CDS |
| GGCTATGGTGATAAAGGCTG+TGG | 0.569335 | 6.2:+3402322 | MS.gene57072:CDS |
| GGCCTTTGTTGTGATGCAAA+TGG | 0.574250 | 6.2:-3401627 | None:intergenic |
| CAACTGTAAGCCCTTTAGGA+TGG | 0.576300 | 6.2:-3400153 | None:intergenic |
| GTAACAACCATTGCAGGTGG+AGG | 0.576648 | 6.2:+3400825 | MS.gene57072:CDS |
| GTTAGCATTACTTAAGAGGA+GGG | 0.579193 | 6.2:+3401219 | MS.gene57072:CDS |
| TGATGGAAGACGTGAGGCTA+TGG | 0.581508 | 6.2:+3402307 | MS.gene57072:CDS |
| TGTTAGCATTACTTAAGAGG+AGG | 0.588173 | 6.2:+3401218 | MS.gene57072:CDS |
| GGTGCAGTTCAAGAACATGA+TGG | 0.596214 | 6.2:+3402290 | MS.gene57072:intron |
| AAACCAAAAGTTAAAGTACC+AGG | 0.610352 | 6.2:+3398457 | MS.gene57072:CDS |
| GGAGATATTTCAATTGAGTG+TGG | 0.612555 | 6.2:-3398776 | None:intergenic |
| CACCATTTGCATCACAACAA+AGG | 0.612868 | 6.2:+3401625 | MS.gene57072:CDS |
| GGAGGCCTAACTGATTTAGG+AGG | 0.614176 | 6.2:-3401651 | None:intergenic |
| CCTCACTTGGACCATCAACA+TGG | 0.615549 | 6.2:-3400869 | None:intergenic |
| AGTGCAACATAGTCGATCCA+TGG | 0.621478 | 6.2:+3398691 | MS.gene57072:intron |
| TCAATTGAAATATCTCCAGA+TGG | 0.621497 | 6.2:+3398782 | MS.gene57072:CDS |
| GTCACCATAATATTCGACCT+AGG | 0.624366 | 6.2:+3402366 | MS.gene57072:CDS |
| ATTACTTAAGAGGAGGGTGA+CGG | 0.627394 | 6.2:+3401225 | MS.gene57072:CDS |
| TAACCAACATAATTTAACCT+AGG | 0.630944 | 6.2:-3402383 | None:intergenic |
| ATATTGGACACATAGATGGA+AGG | 0.643121 | 6.2:+3400110 | MS.gene57072:CDS |
| GGGGTAACAACCATTGCAGG+TGG | 0.643595 | 6.2:+3400822 | MS.gene57072:intron |
| TCTTCATTAGGGATTAAAGG+AGG | 0.645407 | 6.2:-3401669 | None:intergenic |
| ATTTGAGAGTGGTTACAATG+TGG | 0.666565 | 6.2:+3398718 | MS.gene57072:CDS |
| TCCATGGTGAAATTTGAGAG+TGG | 0.666837 | 6.2:+3398707 | MS.gene57072:CDS |
| TAGGAAAAGAAACAATGACT+AGG | 0.672622 | 6.2:+3398198 | None:intergenic |
| ACCACTCTCAAATTTCACCA+TGG | 0.677537 | 6.2:-3398708 | None:intergenic |
| CCATGTTGATGGTCCAAGTG+AGG | 0.680475 | 6.2:+3400869 | MS.gene57072:CDS |
| AGAACATGATGGAAGACGTG+AGG | 0.685866 | 6.2:+3402301 | MS.gene57072:CDS |
| TGGATCATATCATACCTAAG+GGG | 0.695856 | 6.2:-3401058 | None:intergenic |
| GGGCTTACAGTTGATGACAG+TGG | 0.707025 | 6.2:+3400163 | MS.gene57072:CDS |
| TGCTTGCTGGATCTTCTGAG+GGG | 0.707915 | 6.2:+3400086 | MS.gene57072:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAATGTATATATTATA+AGG | - | chr6.2:3398938-3398957 | None:intergenic | 10.0% |
| !! | AAAATATATAAAGTATAACA+TGG | + | chr6.2:3399416-3399435 | MS.gene57072:intron | 10.0% |
| !! | AATATACTAAAAATAACTTA+TGG | - | chr6.2:3400406-3400425 | None:intergenic | 10.0% |
| !!! | AAACAAGATTTTAAAATTTT+AGG | - | chr6.2:3401565-3401584 | None:intergenic | 10.0% |
| !! | AAATTCTTTAGTATTAATTG+TGG | + | chr6.2:3399182-3399201 | MS.gene57072:intron | 15.0% |
| !! | ATCAAAAGAAAAATAAAGAA+AGG | + | chr6.2:3399497-3399516 | MS.gene57072:intron | 15.0% |
| !! | TAGTTAAAGATATATTGTTT+GGG | + | chr6.2:3399772-3399791 | MS.gene57072:intron | 15.0% |
| !! | TGAAAAAATAATAACATTAC+AGG | + | chr6.2:3401157-3401176 | MS.gene57072:intron | 15.0% |
| !! | TTAGTTAAAGATATATTGTT+TGG | + | chr6.2:3399771-3399790 | MS.gene57072:intron | 15.0% |
| !! | TTTCTTTATTGATATATGAT+TGG | + | chr6.2:3399929-3399948 | MS.gene57072:intron | 15.0% |
| !!! | AAGTTTGATATATCTTTTTT+AGG | + | chr6.2:3398896-3398915 | MS.gene57072:intron | 15.0% |
| !!! | AATAAGTTGAAAATATCTTA+TGG | - | chr6.2:3400601-3400620 | None:intergenic | 15.0% |
| !!! | AGTTTTCAAAATATATAGTA+AGG | + | chr6.2:3401354-3401373 | MS.gene57072:intron | 15.0% |
| !!! | ATTTTTTAATTTGTGACTAA+AGG | - | chr6.2:3399401-3399420 | None:intergenic | 15.0% |
| !!! | GTTAAATAAATTTTTAGTCT+TGG | - | chr6.2:3399085-3399104 | None:intergenic | 15.0% |
| !!! | GTTTTCAAAATATATAGTAA+GGG | + | chr6.2:3401355-3401374 | MS.gene57072:intron | 15.0% |
| !!! | TACTATATATTTTGAAAACT+CGG | - | chr6.2:3401354-3401373 | None:intergenic | 15.0% |
| !!! | TGCTTATCATTTTATATATA+GGG | + | chr6.2:3401114-3401133 | MS.gene57072:intron | 15.0% |
| !!! | TTGCTTATCATTTTATATAT+AGG | + | chr6.2:3401113-3401132 | MS.gene57072:intron | 15.0% |
| !! | AAATAGACCATAAATCAATT+TGG | - | chr6.2:3400299-3400318 | None:intergenic | 20.0% |
| !! | AAATATTCATAAGAGTTTAG+AGG | - | chr6.2:3398316-3398335 | None:intergenic | 20.0% |
| !! | AGAATGGAAATTTGAATAAA+AGG | - | chr6.2:3399112-3399131 | None:intergenic | 20.0% |
| !! | CAAACAAAAAAGAAACATAA+TGG | - | chr6.2:3400021-3400040 | None:intergenic | 20.0% |
| !! | CATATATCAATAAAGAAACT+AGG | - | chr6.2:3399927-3399946 | None:intergenic | 20.0% |
| !! | GCAAATGAAAATAAATACTA+AGG | - | chr6.2:3401097-3401116 | None:intergenic | 20.0% |
| !! | TACCAAAAAGAAAAGTAAAA+GGG | - | chr6.2:3399579-3399598 | None:intergenic | 20.0% |
| !! | TCTAAACATGTTATAACATA+TGG | + | chr6.2:3401539-3401558 | MS.gene57072:intron | 20.0% |
| !!! | AAATTGATTTATGGTCTATT+TGG | + | chr6.2:3400298-3400317 | MS.gene57072:intron | 20.0% |
| !!! | AAGTGACGATAAATTTTAAT+AGG | + | chr6.2:3399030-3399049 | MS.gene57072:intron | 20.0% |
| !!! | AGTGACGATAAATTTTAATA+GGG | + | chr6.2:3399031-3399050 | MS.gene57072:intron | 20.0% |
| !!! | ATAATGGAAAATTTTCTAGA+GGG | - | chr6.2:3400005-3400024 | None:intergenic | 20.0% |
| !!! | ATATTATGGTGACTAAATTT+TGG | - | chr6.2:3402359-3402378 | None:intergenic | 20.0% |
| !!! | ATTTATCTTTGAGTTTCTTA+AGG | + | chr6.2:3399650-3399669 | MS.gene57072:intron | 20.0% |
| !!! | CATTATGTTTCTTTTTTGTT+TGG | + | chr6.2:3400019-3400038 | MS.gene57072:intron | 20.0% |
| !!! | GAATTTACCAAATTGATTTA+TGG | + | chr6.2:3400289-3400308 | MS.gene57072:intron | 20.0% |
| !!! | GCTTATCATTTTATATATAG+GGG | + | chr6.2:3401115-3401134 | MS.gene57072:intron | 20.0% |
| !!! | TAAAATCTTGTTTCATTTTC+AGG | + | chr6.2:3401572-3401591 | MS.gene57072:intron | 20.0% |
| !!! | TATATAGTAAGGGTTTTAAA+TGG | + | chr6.2:3401365-3401384 | MS.gene57072:intron | 20.0% |
| !!! | TGTTTAATTAAAGCGTTTAT+CGG | + | chr6.2:3400732-3400751 | MS.gene57072:intron | 20.0% |
| !!! | TTAGGGTTTTTTTTTTTGAA+AGG | - | chr6.2:3400778-3400797 | None:intergenic | 20.0% |
| !!! | TTTTGAAAGGTTATAGTTTA+GGG | - | chr6.2:3400765-3400784 | None:intergenic | 20.0% |
| !!! | TTTTTGAAAGGTTATAGTTT+AGG | - | chr6.2:3400766-3400785 | None:intergenic | 20.0% |
| ! | AAAGCATGTCTTATAGTTTA+GGG | - | chr6.2:3400795-3400814 | None:intergenic | 25.0% |
| ! | AAATAGCAACAACAAAAGAA+TGG | - | chr6.2:3399128-3399147 | None:intergenic | 25.0% |
| ! | AACTTAGAAAATTTGAGCAA+AGG | - | chr6.2:3398881-3398900 | None:intergenic | 25.0% |
| ! | AATAAGACGTAAGTAAATTC+TGG | - | chr6.2:3399836-3399855 | None:intergenic | 25.0% |
| ! | AATGTGGAAACAATATTTGA+TGG | + | chr6.2:3398734-3398753 | MS.gene57072:CDS | 25.0% |
| ! | ACTAAGGATAAGATTAAATG+TGG | - | chr6.2:3401081-3401100 | None:intergenic | 25.0% |
| ! | ATATGTTAGCATTACTTAAG+AGG | + | chr6.2:3401215-3401234 | MS.gene57072:CDS | 25.0% |
| ! | CATAAAAAATTGTTATGTCG+CGG | + | chr6.2:3401496-3401515 | MS.gene57072:intron | 25.0% |
| ! | CCAAAAAAGAAAACAGTTTA+TGG | + | chr6.2:3400476-3400495 | MS.gene57072:intron | 25.0% |
| ! | CGAGAAAATTATAAACTCAA+TGG | - | chr6.2:3398618-3398637 | None:intergenic | 25.0% |
| ! | CTTTCTGTTTGTCTATTTAT+CGG | - | chr6.2:3402062-3402081 | None:intergenic | 25.0% |
| ! | GAAACATCAAACATTCTTAA+AGG | - | chr6.2:3399262-3399281 | None:intergenic | 25.0% |
| ! | GAATGTTGTAACTTATAAAG+TGG | - | chr6.2:3399379-3399398 | None:intergenic | 25.0% |
| ! | GGAAATTTGAATAAAAGGTA+GGG | - | chr6.2:3399107-3399126 | None:intergenic | 25.0% |
| ! | GTACCAAAAAGAAAAGTAAA+AGG | - | chr6.2:3399580-3399599 | None:intergenic | 25.0% |
| ! | TAACCAACATAATTTAACCT+AGG | - | chr6.2:3402386-3402405 | None:intergenic | 25.0% |
| ! | TATAACATGGAATATCTACA+TGG | + | chr6.2:3399429-3399448 | MS.gene57072:intron | 25.0% |
| ! | TCTCAAATTCATCTTCATTA+GGG | - | chr6.2:3401683-3401702 | None:intergenic | 25.0% |
| ! | TCTTGCATATTAATCTCATA+TGG | + | chr6.2:3398972-3398991 | MS.gene57072:intron | 25.0% |
| ! | TGGAAATTTGAATAAAAGGT+AGG | - | chr6.2:3399108-3399127 | None:intergenic | 25.0% |
| ! | TTCTCAAATTCATCTTCATT+AGG | - | chr6.2:3401684-3401703 | None:intergenic | 25.0% |
| ! | TTGAGTTTCTTAAGGAAATT+AGG | + | chr6.2:3399658-3399677 | MS.gene57072:intron | 25.0% |
| ! | TTGGAAAAAACAAGAGATAA+CGG | + | chr6.2:3402002-3402021 | MS.gene57072:intron | 25.0% |
| !! | AAAAGCATGTCTTATAGTTT+AGG | - | chr6.2:3400796-3400815 | None:intergenic | 25.0% |
| !! | AAACTAGGAATATCATTTTG+AGG | - | chr6.2:3399912-3399931 | None:intergenic | 25.0% |
| !! | AATGATCTCTTATGCATTTT+AGG | + | chr6.2:3399002-3399021 | MS.gene57072:intron | 25.0% |
| !! | ACGTCTTATTAGTTGAATAT+CGG | + | chr6.2:3399846-3399865 | MS.gene57072:intron | 25.0% |
| !! | ATATGAAAGTGGTTTTCTTT+TGG | - | chr6.2:3401799-3401818 | None:intergenic | 25.0% |
| !! | ATGATCTCTTATGCATTTTA+GGG | + | chr6.2:3399003-3399022 | MS.gene57072:intron | 25.0% |
| !! | CCATAAACTGTTTTCTTTTT+TGG | - | chr6.2:3400479-3400498 | None:intergenic | 25.0% |
| !! | TATAACATGTTTAGAACTCA+AGG | - | chr6.2:3401534-3401553 | None:intergenic | 25.0% |
| !! | TTAAACTTTTGTTAAGCTCA+AGG | + | chr6.2:3399351-3399370 | MS.gene57072:intron | 25.0% |
| !! | TTGTTTCTTCTCTTCTTAAA+TGG | + | chr6.2:3398416-3398435 | MS.gene57072:CDS | 25.0% |
| !!! | AACTTATTTTCATGAGCTTT+TGG | + | chr6.2:3400613-3400632 | MS.gene57072:intron | 25.0% |
| !!! | ACTTATTTTCATGAGCTTTT+GGG | + | chr6.2:3400614-3400633 | MS.gene57072:intron | 25.0% |
| !!! | ATAAGACATGCTTTTTGTAT+AGG | + | chr6.2:3400801-3400820 | MS.gene57072:intron | 25.0% |
| !!! | ATCCCTTTTACTTTTCTTTT+TGG | + | chr6.2:3399574-3399593 | MS.gene57072:intron | 25.0% |
| !!! | ATCTTTTTGAGCTTATTCTT+AGG | + | chr6.2:3401771-3401790 | MS.gene57072:intron | 25.0% |
| !!! | CATAATGGAAAATTTTCTAG+AGG | - | chr6.2:3400006-3400025 | None:intergenic | 25.0% |
| !!! | GTGACGATAAATTTTAATAG+GGG | + | chr6.2:3399032-3399051 | MS.gene57072:intron | 25.0% |
| !!! | TAAGACATGCTTTTTGTATA+GGG | + | chr6.2:3400802-3400821 | MS.gene57072:intron | 25.0% |
| !!! | TGACGATAAATTTTAATAGG+GGG | + | chr6.2:3399033-3399052 | MS.gene57072:intron | 25.0% |
| !!! | TTCTTTTTTGCAATCATTAG+AGG | + | chr6.2:3399459-3399478 | MS.gene57072:intron | 25.0% |
| !!! | TTTGCTTTTATTGTTCTACT+TGG | + | chr6.2:3398239-3398258 | MS.gene57072:CDS | 25.0% |
| AAAACCAAATATTCACCATC+TGG | - | chr6.2:3398800-3398819 | None:intergenic | 30.0% | |
| AAAAGTAAAAGGGATCATAG+TGG | - | chr6.2:3399569-3399588 | None:intergenic | 30.0% | |
| AAACAAAAACACCTTCACAA+AGG | + | chr6.2:3401943-3401962 | MS.gene57072:intron | 30.0% | |
| AAACAAGGAATTGGAAATGT+TGG | + | chr6.2:3401983-3402002 | MS.gene57072:intron | 30.0% | |
| AAAGTAAAAGGGATCATAGT+GGG | - | chr6.2:3399568-3399587 | None:intergenic | 30.0% | |
| AACATATCCTTACACAAACA+AGG | + | chr6.2:3401968-3401987 | MS.gene57072:intron | 30.0% | |
| AATTTAGTGAAATCTGTCAC+TGG | - | chr6.2:3398565-3398584 | None:intergenic | 30.0% | |
| AGTAGAATCAAAAGATTTCC+CGG | - | chr6.2:3399319-3399338 | None:intergenic | 30.0% | |
| ATAACTTATGGACATGTCAT+CGG | - | chr6.2:3400394-3400413 | None:intergenic | 30.0% | |
| ATAGACAACATTCCAATTCA+TGG | + | chr6.2:3401865-3401884 | MS.gene57072:intron | 30.0% | |
| ATCACAAAACTTTCTTGCAT+TGG | - | chr6.2:3401891-3401910 | None:intergenic | 30.0% | |
| ATTAGAAAGATCAGTGATGA+AGG | + | chr6.2:3400220-3400239 | MS.gene57072:CDS | 30.0% | |
| CTTCTCTTCTTAAATGGATA+TGG | + | chr6.2:3398422-3398441 | MS.gene57072:CDS | 30.0% | |
| GAATTTGAGAAACATGATGA+AGG | + | chr6.2:3401693-3401712 | MS.gene57072:CDS | 30.0% | |
| GCTAAATGGTTAAACTCAAA+TGG | + | chr6.2:3399738-3399757 | MS.gene57072:intron | 30.0% | |
| GGAAATTAGGAAATATCACA+TGG | + | chr6.2:3399671-3399690 | MS.gene57072:intron | 30.0% | |
| GGAAATTTACATCTTGACAT+TGG | - | chr6.2:3398860-3398879 | None:intergenic | 30.0% | |
| GTGAATATCACTTTCGAAAA+TGG | - | chr6.2:3399883-3399902 | None:intergenic | 30.0% | |
| TCAATTGAAATATCTCCAGA+TGG | + | chr6.2:3398782-3398801 | MS.gene57072:CDS | 30.0% | |
| TCATCTTCATTAGGGATTAA+AGG | - | chr6.2:3401675-3401694 | None:intergenic | 30.0% | |
| TTAACCTAGGTCGAATATTA+TGG | - | chr6.2:3402373-3402392 | None:intergenic | 30.0% | |
| TTCATCACTGATCTTTCTAA+TGG | - | chr6.2:3400221-3400240 | None:intergenic | 30.0% | |
| ! | AAAACTCGGTATCCAATTTT+AGG | - | chr6.2:3401340-3401359 | None:intergenic | 30.0% |
| ! | AAACCAAAAGTTAAAGTACC+AGG | + | chr6.2:3398457-3398476 | MS.gene57072:CDS | 30.0% |
| ! | AAACTCGGTATCCAATTTTA+GGG | - | chr6.2:3401339-3401358 | None:intergenic | 30.0% |
| ! | ACACACTTGAATTTTGAATC+TGG | - | chr6.2:3399239-3399258 | None:intergenic | 30.0% |
| ! | TAAACACTTGAGAGACTTTT+TGG | + | chr6.2:3400350-3400369 | MS.gene57072:intron | 30.0% |
| !! | AAGACATGCTTTTTGTATAG+GGG | + | chr6.2:3400803-3400822 | MS.gene57072:intron | 30.0% |
| !! | ACGATAAATTTTAATAGGGG+GGG | + | chr6.2:3399035-3399054 | MS.gene57072:intron | 30.0% |
| !! | AGATGGTGAATATTTGGTTT+TGG | + | chr6.2:3398799-3398818 | MS.gene57072:CDS | 30.0% |
| !! | CAGCTTTTGAAAACAGTTTA+TGG | + | chr6.2:3400444-3400463 | MS.gene57072:intron | 30.0% |
| !! | GACGATAAATTTTAATAGGG+GGG | + | chr6.2:3399034-3399053 | MS.gene57072:intron | 30.0% |
| !! | GGTGTTTTTGTTTCCATATT+AGG | - | chr6.2:3401936-3401955 | None:intergenic | 30.0% |
| !! | GTTTCATTTTCAGGATTCAA+GGG | + | chr6.2:3401581-3401600 | MS.gene57072:intron | 30.0% |
| !! | GTTTTTGTTTCCATATTAGG+AGG | - | chr6.2:3401933-3401952 | None:intergenic | 30.0% |
| !! | TGGTACTTTAACTTTTGGTT+TGG | - | chr6.2:3398458-3398477 | None:intergenic | 30.0% |
| !! | TGGTATTGATGATATGAAAG+TGG | - | chr6.2:3401810-3401829 | None:intergenic | 30.0% |
| !! | TGTTTCATTTTCAGGATTCA+AGG | + | chr6.2:3401580-3401599 | MS.gene57072:intron | 30.0% |
| !!! | ATAGTAAGGGTTTTAAATGG+TGG | + | chr6.2:3401368-3401387 | MS.gene57072:intron | 30.0% |
| !!! | CTTTTGTTGTTGCTATTTGT+TGG | + | chr6.2:3399130-3399149 | MS.gene57072:intron | 30.0% |
| !!! | TAGGAATATCATTTTGAGGT+TGG | - | chr6.2:3399908-3399927 | None:intergenic | 30.0% |
| AAAAAATTTGTCACCCTGAG+GGG | - | chr6.2:3401297-3401316 | None:intergenic | 35.0% | |
| AAGTAAAAGGGATCATAGTG+GGG | - | chr6.2:3399567-3399586 | None:intergenic | 35.0% | |
| AGGAAATATCACATGGAGAT+TGG | + | chr6.2:3399678-3399697 | MS.gene57072:intron | 35.0% | |
| AGTGAACTCAAGTTCATCAA+TGG | + | chr6.2:3401743-3401762 | MS.gene57072:CDS | 35.0% | |
| ATATTGGACACATAGATGGA+AGG | + | chr6.2:3400110-3400129 | MS.gene57072:CDS | 35.0% | |
| ATCTCCAGATGGTGAATATT+TGG | + | chr6.2:3398793-3398812 | MS.gene57072:CDS | 35.0% | |
| ATTTGAGAGTGGTTACAATG+TGG | + | chr6.2:3398718-3398737 | MS.gene57072:CDS | 35.0% | |
| CAAAAAATTTGTCACCCTGA+GGG | - | chr6.2:3401298-3401317 | None:intergenic | 35.0% | |
| CATAGAGTGAAGACAAAATC+TGG | + | chr6.2:3399716-3399735 | MS.gene57072:intron | 35.0% | |
| CATTGCAGACACATTGAATA+TGG | + | chr6.2:3400195-3400214 | MS.gene57072:CDS | 35.0% | |
| CGACCTAGGTTAAATTATGT+TGG | + | chr6.2:3402380-3402399 | MS.gene57072:CDS | 35.0% | |
| GAAGACAAAATCTGGCTAAA+TGG | + | chr6.2:3399724-3399743 | MS.gene57072:intron | 35.0% | |
| GAAGCAAAGTCATATGTACA+AGG | - | chr6.2:3399292-3399311 | None:intergenic | 35.0% | |
| GAGACAAATGAGATTGTGTT+TGG | + | chr6.2:3402269-3402288 | MS.gene57072:intron | 35.0% | |
| GGAGATATTTCAATTGAGTG+TGG | - | chr6.2:3398779-3398798 | None:intergenic | 35.0% | |
| GTAGAATCAAAAGATTTCCC+GGG | - | chr6.2:3399318-3399337 | None:intergenic | 35.0% | |
| GTGAACTCAAGTTCATCAAT+GGG | + | chr6.2:3401744-3401763 | MS.gene57072:CDS | 35.0% | |
| GTGGATCATATCATACCTAA+GGG | - | chr6.2:3401062-3401081 | None:intergenic | 35.0% | |
| GTTAGCATTACTTAAGAGGA+GGG | + | chr6.2:3401219-3401238 | MS.gene57072:CDS | 35.0% | |
| GTTGTTGATGTTGATGTTGT+TGG | - | chr6.2:3401830-3401849 | None:intergenic | 35.0% | |
| TAGTTGAATATCGGATTACC+AGG | + | chr6.2:3399855-3399874 | MS.gene57072:intron | 35.0% | |
| TATGACAATAGTTTCCCCTT+AGG | + | chr6.2:3401044-3401063 | MS.gene57072:CDS | 35.0% | |
| TCAAAAAATTTGTCACCCTG+AGG | - | chr6.2:3401299-3401318 | None:intergenic | 35.0% | |
| TCCTTACACAAACAAGGAAT+TGG | + | chr6.2:3401974-3401993 | MS.gene57072:intron | 35.0% | |
| TCTACTAGTAAATCTCTACC+TGG | - | chr6.2:3398478-3398497 | None:intergenic | 35.0% | |
| TCTTCATTAGGGATTAAAGG+AGG | - | chr6.2:3401672-3401691 | None:intergenic | 35.0% | |
| TGACATGCAGAAATTGTTAC+TGG | + | chr6.2:3398379-3398398 | MS.gene57072:intron | 35.0% | |
| TGGATCATATCATACCTAAG+GGG | - | chr6.2:3401061-3401080 | None:intergenic | 35.0% | |
| TGTGGATCATATCATACCTA+AGG | - | chr6.2:3401063-3401082 | None:intergenic | 35.0% | |
| TGTTAGCATTACTTAAGAGG+AGG | + | chr6.2:3401218-3401237 | MS.gene57072:CDS | 35.0% | |
| TTAAATGGTGGTCATGGTAA+CGG | + | chr6.2:3401380-3401399 | MS.gene57072:intron | 35.0% | |
| TTCTTCTCATAGTAACTCGA+TGG | - | chr6.2:3402245-3402264 | None:intergenic | 35.0% | |
| TTTGTTTCCATATTAGGAGG+TGG | - | chr6.2:3401930-3401949 | None:intergenic | 35.0% | |
| ! | ACTGTTTTCAAAAGCTGTCT+TGG | - | chr6.2:3400441-3400460 | None:intergenic | 35.0% |
| ! | ATATTTGATGGACGTAAGCT+TGG | + | chr6.2:3398746-3398765 | MS.gene57072:CDS | 35.0% |
| ! | GGATATGTTTTCCTTTGTGA+AGG | - | chr6.2:3401957-3401976 | None:intergenic | 35.0% |
| ! | TAGAAGTAGTTGCTCTCTTT+TGG | + | chr6.2:3400929-3400948 | MS.gene57072:CDS | 35.0% |
| ! | TCCAATTCCTTGTTTGTGTA+AGG | - | chr6.2:3401978-3401997 | None:intergenic | 35.0% |
| ! | TTTTGGTACTTCTTGCTACA+TGG | + | chr6.2:3399591-3399610 | MS.gene57072:intron | 35.0% |
| !! | CTACCTGGTACTTTAACTTT+TGG | - | chr6.2:3398463-3398482 | None:intergenic | 35.0% |
| !! | GCAAGAAAGTTTTGTGATTC+CGG | + | chr6.2:3401893-3401912 | MS.gene57072:intron | 35.0% |
| !!! | CTTGTTTCTGCTGGATTTTT+TGG | + | chr6.2:3401190-3401209 | MS.gene57072:CDS | 35.0% |
| AAGCTGTCTTGGAGAGTTTA+TGG | - | chr6.2:3400430-3400449 | None:intergenic | 40.0% | |
| ACCACTCTCAAATTTCACCA+TGG | - | chr6.2:3398711-3398730 | None:intergenic | 40.0% | |
| AGGGCACATATAAGGACAAA+AGG | + | chr6.2:3401600-3401619 | MS.gene57072:CDS | 40.0% | |
| ATTACTTAAGAGGAGGGTGA+CGG | + | chr6.2:3401225-3401244 | MS.gene57072:CDS | 40.0% | |
| CAAGACTGAACCATCCTAAA+GGG | + | chr6.2:3400143-3400162 | MS.gene57072:CDS | 40.0% | |
| CACCATTTGCATCACAACAA+AGG | + | chr6.2:3401625-3401644 | MS.gene57072:CDS | 40.0% | |
| CGCTGCAATCGTTAATATTG+CGG | + | chr6.2:3401412-3401431 | MS.gene57072:intron | 40.0% | |
| GAAAACTTTGCATCCTCACT+TGG | - | chr6.2:3400885-3400904 | None:intergenic | 40.0% | |
| GGGTATATTGGACACATAGA+TGG | + | chr6.2:3400106-3400125 | MS.gene57072:CDS | 40.0% | |
| GTCACCATAATATTCGACCT+AGG | + | chr6.2:3402366-3402385 | MS.gene57072:CDS | 40.0% | |
| GTTTGTCTATTTATCGGCAC+AGG | - | chr6.2:3402056-3402075 | None:intergenic | 40.0% | |
| TCACTTTCGAAAATGGATCC+TGG | - | chr6.2:3399876-3399895 | None:intergenic | 40.0% | |
| TCATCAACTGTAAGCCCTTT+AGG | - | chr6.2:3400160-3400179 | None:intergenic | 40.0% | |
| TCCATGGTGAAATTTGAGAG+TGG | + | chr6.2:3398707-3398726 | MS.gene57072:CDS | 40.0% | |
| TGAGGTTGCATCAATCACAT+TGG | - | chr6.2:3401449-3401468 | None:intergenic | 40.0% | |
| TTCTATACAATGACCCCTCA+GGG | + | chr6.2:3401281-3401300 | MS.gene57072:intron | 40.0% | |
| TTGTTTCACTTACTTGCAGG+TGG | - | chr6.2:3398293-3398312 | None:intergenic | 40.0% | |
| ! | AAAGGAGGCCTAACTGATTT+AGG | - | chr6.2:3401657-3401676 | None:intergenic | 40.0% |
| ! | AAGTAGTTGCTCTCTTTTGG+TGG | + | chr6.2:3400932-3400951 | MS.gene57072:CDS | 40.0% |
| ! | AGATTAGTCGGCCCTAAAAT+TGG | + | chr6.2:3401325-3401344 | MS.gene57072:intron | 40.0% |
| ! | AGGATTCAAGGGCACATATA+AGG | + | chr6.2:3401592-3401611 | MS.gene57072:intron | 40.0% |
| ! | AGGTTGTTTCACTTACTTGC+AGG | - | chr6.2:3398296-3398315 | None:intergenic | 40.0% |
| ! | GAAGGCTTCTTTGTTTCTCT+TGG | + | chr6.2:3401711-3401730 | MS.gene57072:CDS | 40.0% |
| ! | GTGATAAAGGCTGTGGATTA+TGG | + | chr6.2:3402329-3402348 | MS.gene57072:CDS | 40.0% |
| ! | TCCCTGGCTAAATTTTGTGA+CGG | - | chr6.2:3398541-3398560 | None:intergenic | 40.0% |
| ! | TTCTTGCATTGGCCATGAAT+TGG | - | chr6.2:3401880-3401899 | None:intergenic | 40.0% |
| ! | TTTTGACCCCTCAGATTAGT+CGG | + | chr6.2:3401313-3401332 | MS.gene57072:intron | 40.0% |
| !! | GAAAGTTTTGTGATTCCGGA+CGG | + | chr6.2:3401897-3401916 | MS.gene57072:intron | 40.0% |
| !!! | AGGGTTTTAAATGGTGGTCA+TGG | + | chr6.2:3401374-3401393 | MS.gene57072:intron | 40.0% |
| ACGTGAGGCTATGGTGATAA+AGG | + | chr6.2:3402316-3402335 | MS.gene57072:CDS | 45.0% | |
| AGAACTCAAGGTAGCGATCT+AGG | - | chr6.2:3401522-3401541 | None:intergenic | 45.0% | |
| AGACGAACCACCTCCTAATA+TGG | + | chr6.2:3401920-3401939 | MS.gene57072:intron | 45.0% | |
| AGCAAACCAAAACTGCTTGC+TGG | + | chr6.2:3400073-3400092 | MS.gene57072:CDS | 45.0% | |
| AGTGCAACATAGTCGATCCA+TGG | + | chr6.2:3398691-3398710 | MS.gene57072:intron | 45.0% | |
| ATAGGGGTAACAACCATTGC+AGG | + | chr6.2:3400819-3400838 | MS.gene57072:intron | 45.0% | |
| ATATGACTTTGCTTCGTGCC+CGG | + | chr6.2:3399297-3399316 | MS.gene57072:intron | 45.0% | |
| ATTGCAGGTGGAGGAAAAAG+AGG | + | chr6.2:3400834-3400853 | MS.gene57072:CDS | 45.0% | |
| CAATTAGGAGGCCATGTTGA+TGG | + | chr6.2:3400858-3400877 | MS.gene57072:CDS | 45.0% | |
| CATCAACATGGCCTCCTAAT+TGG | - | chr6.2:3400860-3400879 | None:intergenic | 45.0% | |
| CCCGTCACAAAATTTAGCCA+GGG | + | chr6.2:3398537-3398556 | MS.gene57072:intron | 45.0% | |
| CTTCTATACAATGACCCCTC+AGG | + | chr6.2:3401280-3401299 | MS.gene57072:intron | 45.0% | |
| GATTGATGCAACCTCAGAAG+CGG | + | chr6.2:3401453-3401472 | MS.gene57072:intron | 45.0% | |
| GCAAGACTGAACCATCCTAA+AGG | + | chr6.2:3400142-3400161 | MS.gene57072:CDS | 45.0% | |
| GGAAAAAGAGGCCAATTAGG+AGG | + | chr6.2:3400846-3400865 | MS.gene57072:CDS | 45.0% | |
| GGAGGAAAAAGAGGCCAATT+AGG | + | chr6.2:3400843-3400862 | MS.gene57072:CDS | 45.0% | |
| GGTGCAGTTCAAGAACATGA+TGG | + | chr6.2:3402290-3402309 | MS.gene57072:intron | 45.0% | |
| TGGTTCAGTCTTGCATCTCT+AGG | - | chr6.2:3400136-3400155 | None:intergenic | 45.0% | |
| TGTCTATTTATCGGCACAGG+CGG | - | chr6.2:3402053-3402072 | None:intergenic | 45.0% | |
| TTTCACTTACTTGCAGGTGG+TGG | - | chr6.2:3398290-3398309 | None:intergenic | 45.0% | |
| ! | AGAACATGATGGAAGACGTG+AGG | + | chr6.2:3402301-3402320 | MS.gene57072:CDS | 45.0% |
| ! | CAACTGTAAGCCCTTTAGGA+TGG | - | chr6.2:3400156-3400175 | None:intergenic | 45.0% |
| ! | CCCTGGCTAAATTTTGTGAC+GGG | - | chr6.2:3398540-3398559 | None:intergenic | 45.0% |
| ! | CCTGGCTAAATTTTGTGACG+GGG | - | chr6.2:3398539-3398558 | None:intergenic | 45.0% |
| ! | GAAGATCCAGCAAGCAGTTT+TGG | - | chr6.2:3400082-3400101 | None:intergenic | 45.0% |
| ! | GGATCTTCTGAGGGGTATAT+TGG | + | chr6.2:3400094-3400113 | MS.gene57072:CDS | 45.0% |
| ! | GGCCTTTGTTGTGATGCAAA+TGG | - | chr6.2:3401630-3401649 | None:intergenic | 45.0% |
| ! | TAGTTGCTCTCTTTTGGTGG+TGG | + | chr6.2:3400935-3400954 | MS.gene57072:CDS | 45.0% |
| ! | TCTTTTTCCTCCACCTGCAA+TGG | - | chr6.2:3400835-3400854 | None:intergenic | 45.0% |
| ! | TTTAGGGCCGACTAATCTGA+GGG | - | chr6.2:3401323-3401342 | None:intergenic | 45.0% |
| !! | ATAGCTGCTCTTGTTTCTGC+TGG | + | chr6.2:3401181-3401200 | MS.gene57072:CDS | 45.0% |
| !!! | TCTCTTTTGGTGGTGGATAG+AGG | + | chr6.2:3400942-3400961 | MS.gene57072:CDS | 45.0% |
| !!! | TTTTAGGGCCGACTAATCTG+AGG | - | chr6.2:3401324-3401343 | None:intergenic | 45.0% |
| CCCCGTCACAAAATTTAGCC+AGG | + | chr6.2:3398536-3398555 | MS.gene57072:intron | 50.0% | |
| CCTCACTTGGACCATCAACA+TGG | - | chr6.2:3400872-3400891 | None:intergenic | 50.0% | |
| GGCCTCCTCCTAAATCAGTT+AGG | + | chr6.2:3401646-3401665 | MS.gene57072:CDS | 50.0% | |
| GGCTATGGTGATAAAGGCTG+TGG | + | chr6.2:3402322-3402341 | MS.gene57072:CDS | 50.0% | |
| GTAACAACCATTGCAGGTGG+AGG | + | chr6.2:3400825-3400844 | MS.gene57072:CDS | 50.0% | |
| TATGACTTTGCTTCGTGCCC+GGG | + | chr6.2:3399298-3399317 | MS.gene57072:intron | 50.0% | |
| TGATGGAAGACGTGAGGCTA+TGG | + | chr6.2:3402307-3402326 | MS.gene57072:CDS | 50.0% | |
| TTAGGGCCGACTAATCTGAG+GGG | - | chr6.2:3401322-3401341 | None:intergenic | 50.0% | |
| ! | ACTGCTTGCTGGATCTTCTG+AGG | + | chr6.2:3400084-3400103 | MS.gene57072:CDS | 50.0% |
| ! | CTGCTTGCTGGATCTTCTGA+GGG | + | chr6.2:3400085-3400104 | MS.gene57072:CDS | 50.0% |
| ! | GGAGGCCTAACTGATTTAGG+AGG | - | chr6.2:3401654-3401673 | None:intergenic | 50.0% |
| ! | GGCCTAACTGATTTAGGAGG+AGG | - | chr6.2:3401651-3401670 | None:intergenic | 50.0% |
| ! | TGCTTGCTGGATCTTCTGAG+GGG | + | chr6.2:3400086-3400105 | MS.gene57072:CDS | 50.0% |
| !! | CCATGTTGATGGTCCAAGTG+AGG | + | chr6.2:3400869-3400888 | MS.gene57072:CDS | 50.0% |
| !! | GAAATCTGTCACTGGTTCCC+TGG | - | chr6.2:3398557-3398576 | None:intergenic | 50.0% |
| !! | GGGCTTACAGTTGATGACAG+TGG | + | chr6.2:3400163-3400182 | MS.gene57072:CDS | 50.0% |
| CTATTTATCGGCACAGGCGG+AGG | - | chr6.2:3402050-3402069 | None:intergenic | 55.0% | |
| GGGGTAACAACCATTGCAGG+TGG | + | chr6.2:3400822-3400841 | MS.gene57072:intron | 55.0% | |
| ! | GGTGGTGGTGTAGCTGAAGT+TGG | - | chr6.2:3398275-3398294 | None:intergenic | 55.0% |
| TGACAACGCAGCCGCTTCTG+AGG | - | chr6.2:3401467-3401486 | None:intergenic | 60.0% | |
| GGAGGTGGTTCGTCTCCGTC+CGG | - | chr6.2:3401915-3401934 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 3398212 | 3402421 | 3398212 | ID=MS.gene57072 |
| chr6.2 | mRNA | 3398212 | 3402421 | 3398212 | ID=MS.gene57072.t1;Parent=MS.gene57072 |
| chr6.2 | exon | 3398212 | 3398299 | 3398212 | ID=MS.gene57072.t1.exon1;Parent=MS.gene57072.t1 |
| chr6.2 | CDS | 3398212 | 3398299 | 3398212 | ID=cds.MS.gene57072.t1;Parent=MS.gene57072.t1 |
| chr6.2 | exon | 3398389 | 3398478 | 3398389 | ID=MS.gene57072.t1.exon2;Parent=MS.gene57072.t1 |
| chr6.2 | CDS | 3398389 | 3398478 | 3398389 | ID=cds.MS.gene57072.t1;Parent=MS.gene57072.t1 |
| chr6.2 | exon | 3398693 | 3398869 | 3398693 | ID=MS.gene57072.t1.exon3;Parent=MS.gene57072.t1 |
| chr6.2 | CDS | 3398693 | 3398869 | 3398693 | ID=cds.MS.gene57072.t1;Parent=MS.gene57072.t1 |
| chr6.2 | exon | 3400071 | 3400241 | 3400071 | ID=MS.gene57072.t1.exon4;Parent=MS.gene57072.t1 |
| chr6.2 | CDS | 3400071 | 3400241 | 3400071 | ID=cds.MS.gene57072.t1;Parent=MS.gene57072.t1 |
| chr6.2 | exon | 3400823 | 3401065 | 3400823 | ID=MS.gene57072.t1.exon5;Parent=MS.gene57072.t1 |
| chr6.2 | CDS | 3400823 | 3401065 | 3400823 | ID=cds.MS.gene57072.t1;Parent=MS.gene57072.t1 |
| chr6.2 | exon | 3401179 | 3401267 | 3401179 | ID=MS.gene57072.t1.exon6;Parent=MS.gene57072.t1 |
| chr6.2 | CDS | 3401179 | 3401267 | 3401179 | ID=cds.MS.gene57072.t1;Parent=MS.gene57072.t1 |
| chr6.2 | exon | 3401594 | 3401765 | 3401594 | ID=MS.gene57072.t1.exon7;Parent=MS.gene57072.t1 |
| chr6.2 | CDS | 3401594 | 3401765 | 3401594 | ID=cds.MS.gene57072.t1;Parent=MS.gene57072.t1 |
| chr6.2 | exon | 3402297 | 3402421 | 3402297 | ID=MS.gene57072.t1.exon8;Parent=MS.gene57072.t1 |
| chr6.2 | CDS | 3402297 | 3402421 | 3402297 | ID=cds.MS.gene57072.t1;Parent=MS.gene57072.t1 |
| Gene Sequence |
| Protein sequence |
