Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57215.t1 | XP_003611675.1 | 98.6 | 504 | 7 | 0 | 1 | 504 | 1 | 504 | 1.30E-273 | 951.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57215.t1 | Q9FH90 | 66.6 | 458 | 141 | 4 | 1 | 450 | 1 | 454 | 2.9e-178 | 626.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57215.t1 | G7K596 | 98.6 | 504 | 7 | 0 | 1 | 504 | 1 | 504 | 9.1e-274 | 951.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049227 | MS.gene57215 | 0.865538 | 5.49E-65 | -1.69E-46 |
| MS.gene049887 | MS.gene57215 | 0.800743 | 1.25E-48 | -1.69E-46 |
| MS.gene053143 | MS.gene57215 | 0.835422 | 1.69E-56 | -1.69E-46 |
| MS.gene054585 | MS.gene57215 | 0.809279 | 2.05E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57215.t1 | MTR_5g016600 | 99.008 | 504 | 5 | 0 | 1 | 504 | 1 | 504 | 0.0 | 1024 |
| MS.gene57215.t1 | MTR_4g094912 | 68.288 | 514 | 135 | 9 | 1 | 501 | 1 | 499 | 0.0 | 644 |
| MS.gene57215.t1 | MTR_3g111060 | 27.986 | 293 | 160 | 9 | 151 | 434 | 188 | 438 | 1.57e-24 | 106 |
| MS.gene57215.t1 | MTR_3g110142 | 29.532 | 342 | 178 | 15 | 113 | 432 | 131 | 431 | 9.63e-24 | 103 |
| MS.gene57215.t1 | MTR_3g110142 | 31.925 | 213 | 111 | 7 | 147 | 359 | 178 | 356 | 2.44e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57215.t1 | AT5G67230 | 63.261 | 509 | 160 | 8 | 1 | 499 | 1 | 492 | 0.0 | 647 |
| MS.gene57215.t1 | AT4G36890 | 67.396 | 457 | 127 | 8 | 1 | 439 | 1 | 453 | 0.0 | 607 |
| MS.gene57215.t1 | AT1G27600 | 29.866 | 298 | 157 | 10 | 150 | 437 | 139 | 394 | 3.74e-26 | 110 |
| MS.gene57215.t1 | AT1G27600 | 29.866 | 298 | 157 | 10 | 150 | 437 | 139 | 394 | 3.74e-26 | 110 |
| MS.gene57215.t1 | AT2G37090 | 24.870 | 386 | 225 | 21 | 40 | 416 | 18 | 347 | 1.03e-13 | 72.8 |
Find 131 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAGACTGCCTCGATTAT+TGG | 0.156276 | 5.4:+9927094 | MS.gene57215:CDS |
| TGATGCGTCTTCATGCTTTA+AGG | 0.188622 | 5.4:+9927200 | MS.gene57215:CDS |
| CTTCAATTCATTACGATATA+CGG | 0.199782 | 5.4:+9928428 | MS.gene57215:CDS |
| ACTTCTACTGCGTCTGGATC+TGG | 0.214817 | 5.4:-9930071 | None:intergenic |
| GCCTCGATTATTGGAAAATC+TGG | 0.237895 | 5.4:+9927103 | MS.gene57215:CDS |
| TGCTTAATCAGCCTCGTTCT+CGG | 0.309400 | 5.4:+9926647 | MS.gene57215:CDS |
| CCGACAAAATTTGAATGGTC+TGG | 0.319336 | 5.4:+9928492 | MS.gene57215:CDS |
| ATGTCTATCCTCCCACAAAC+TGG | 0.330083 | 5.4:-9927164 | None:intergenic |
| TGATAGTAATATGCATAATA+TGG | 0.344407 | 5.4:+9928221 | MS.gene57215:CDS |
| CGATAAGCCAGAGTGGATTA+AGG | 0.360709 | 5.4:+9928554 | MS.gene57215:CDS |
| TGCAGCTGAAATTTCTTCAT+TGG | 0.365838 | 5.4:+9928317 | MS.gene57215:CDS |
| TTCCACCGGAACAGTGATTC+CGG | 0.373427 | 5.4:-9926759 | None:intergenic |
| AACATCCTTCCAAAGTAATC+TGG | 0.378146 | 5.4:-9928529 | None:intergenic |
| GGGAGTTCAGGAGGAGAGTC+TGG | 0.378580 | 5.4:-9929971 | None:intergenic |
| TCTCTTACTTCTACTGCGTC+TGG | 0.379222 | 5.4:-9930077 | None:intergenic |
| CGACAAAATTTGAATGGTCT+GGG | 0.388127 | 5.4:+9928493 | MS.gene57215:CDS |
| ATGGGTGATTGACCCTCCTT+TGG | 0.392966 | 5.4:+9929916 | MS.gene57215:CDS |
| TTCATTACTTCCACAGGATC+CGG | 0.393487 | 5.4:-9926875 | None:intergenic |
| AATGAACAGAGATTGTTGTT+TGG | 0.396717 | 5.4:+9926926 | MS.gene57215:CDS |
| TTGTGCCTTATGATCTGATT+TGG | 0.408447 | 5.4:+9927044 | MS.gene57215:CDS |
| GATTAAAGATTATTCATGTT+GGG | 0.415897 | 5.4:+9927125 | MS.gene57215:CDS |
| GATGCGGCCATGGCCGAATC+CGG | 0.419202 | 5.4:-9926853 | None:intergenic |
| CTCTGAAGCTGTTTGTTCTA+CGG | 0.421760 | 5.4:-9926547 | None:intergenic |
| GGAGACACGGGATCCGGATT+CGG | 0.428474 | 5.4:+9926840 | MS.gene57215:CDS |
| GGCCATGGAGTGCGTTTCGA+TGG | 0.429896 | 5.4:-9929950 | None:intergenic |
| GCGCCGGTGCCGGAGGTGAA+TGG | 0.438005 | 5.4:-9926737 | None:intergenic |
| GGATTAAAGATTATTCATGT+TGG | 0.438140 | 5.4:+9927124 | MS.gene57215:CDS |
| AGAAAACAAGACGAGAAAAT+CGG | 0.438239 | 5.4:-9926673 | None:intergenic |
| AATTGTCGCCGGTGACTTAA+CGG | 0.438702 | 5.4:-9926597 | None:intergenic |
| CAACAGAATGTTCTAACAAA+CGG | 0.440408 | 5.4:+9926785 | MS.gene57215:CDS |
| AACAGAATGTTCTAACAAAC+GGG | 0.445176 | 5.4:+9926786 | MS.gene57215:CDS |
| TCAGAAAATGCCCAGTTTGT+GGG | 0.445775 | 5.4:+9927153 | MS.gene57215:CDS |
| CGTATATCGTAATGAATTGA+AGG | 0.445991 | 5.4:-9928427 | None:intergenic |
| CTTCTACTGCGTCTGGATCT+GGG | 0.446602 | 5.4:-9930070 | None:intergenic |
| ATGAAATTCAGAGTGTGAAA+TGG | 0.447404 | 5.4:+9928253 | MS.gene57215:CDS |
| GATTCGGCCATGGCCGCATC+CGG | 0.448954 | 5.4:+9926856 | MS.gene57215:CDS |
| AGTGATTCCGGCGCCGGTGC+CGG | 0.451879 | 5.4:-9926747 | None:intergenic |
| ATCAGAAAATGCCCAGTTTG+TGG | 0.453676 | 5.4:+9927152 | MS.gene57215:CDS |
| ATTTGGATTGTGGTGGAAGC+TGG | 0.460773 | 5.4:+9927061 | MS.gene57215:CDS |
| ACAATCCAAATCAGATCATA+AGG | 0.460948 | 5.4:-9927049 | None:intergenic |
| TGCGCTTTCATTACTTCCAC+AGG | 0.460964 | 5.4:-9926881 | None:intergenic |
| TTCACCTCCGGCACCGGCGC+CGG | 0.461470 | 5.4:+9926740 | MS.gene57215:CDS |
| GAAATGGATCGGTGCTGTTT+CGG | 0.465735 | 5.4:+9928269 | MS.gene57215:CDS |
| TTATGATCTGATTTGGATTG+TGG | 0.466877 | 5.4:+9927051 | MS.gene57215:CDS |
| CGGCGCCGGAATCACTGTTC+CGG | 0.471719 | 5.4:+9926754 | MS.gene57215:CDS |
| TGTTGAATTCCAGATTACTT+TGG | 0.473184 | 5.4:+9928520 | MS.gene57215:CDS |
| CACCAAAGTGATTGGTGTAC+AGG | 0.476382 | 5.4:+9930108 | MS.gene57215:CDS |
| CGCCGGTGACTTAACGGCGC+CGG | 0.479709 | 5.4:-9926591 | None:intergenic |
| CGCCGGCGCCGTTAAGTCAC+CGG | 0.482259 | 5.4:+9926589 | MS.gene57215:CDS |
| TGTTCTAACAAACGGGAGTT+CGG | 0.482950 | 5.4:+9926793 | MS.gene57215:CDS |
| ACAGGATCCGGATGCGGCCA+TGG | 0.485837 | 5.4:-9926863 | None:intergenic |
| AACAAACGGGAGTTCGGTAG+TGG | 0.486109 | 5.4:+9926799 | MS.gene57215:CDS |
| AAGCATGACACCAAAGTGAT+TGG | 0.488095 | 5.4:+9930100 | MS.gene57215:CDS |
| AGATGCACCAATTCATATCT+CGG | 0.491651 | 5.4:-9930152 | None:intergenic |
| TACACCGTTCCATTCACCTC+CGG | 0.496125 | 5.4:+9926728 | MS.gene57215:CDS |
| AGAGGCTTAGATTCAGATAA+CGG | 0.497985 | 5.4:+9926566 | MS.gene57215:CDS |
| GCAGGACCTTGCACCGGCAT+TGG | 0.498839 | 5.4:-9928369 | None:intergenic |
| TTCAATTCATTACGATATAC+GGG | 0.499087 | 5.4:+9928429 | MS.gene57215:CDS |
| TGTTGCCGACAAAATTTGAA+TGG | 0.500655 | 5.4:+9928487 | MS.gene57215:CDS |
| AAGGATCTTGATGCATTGGA+TGG | 0.504502 | 5.4:+9928573 | MS.gene57215:CDS |
| CGGAACAGTGATTCCGGCGC+CGG | 0.505384 | 5.4:-9926753 | None:intergenic |
| GTTCCATTCACCTCCGGCAC+CGG | 0.506995 | 5.4:+9926734 | MS.gene57215:CDS |
| GTGCAGTTTACATTGATGAC+CGG | 0.511167 | 5.4:+9928457 | MS.gene57215:CDS |
| TGGTTGGGAGACACGGGATC+CGG | 0.512530 | 5.4:+9926834 | MS.gene57215:CDS |
| GATTGTGAGAAAAGAGAAGC+TGG | 0.516119 | 5.4:+9928176 | MS.gene57215:CDS |
| TTGTCGGCAACACTGGTGCC+CGG | 0.518942 | 5.4:-9928476 | None:intergenic |
| GATTAAGGATCTTGATGCAT+TGG | 0.519612 | 5.4:+9928569 | MS.gene57215:CDS |
| ACCTTGCACCGGCATTGGCA+TGG | 0.519908 | 5.4:-9928364 | None:intergenic |
| TGGATCGGTGCTGTTTCGGT+TGG | 0.520170 | 5.4:+9928273 | MS.gene57215:CDS |
| TGGAACGGTGTAAATATTAG+TGG | 0.521470 | 5.4:-9926717 | None:intergenic |
| GCCATGGAGTGCGTTTCGAT+GGG | 0.536780 | 5.4:-9929949 | None:intergenic |
| GTGCAAGGTCCTGCTTGTAA+TGG | 0.539674 | 5.4:+9928378 | MS.gene57215:CDS |
| TTTCAAGCGATGCATTTGAC+TGG | 0.539811 | 5.4:+9927001 | MS.gene57215:CDS |
| TGGCGAGTAGAGTCGTGGTT+GGG | 0.540904 | 5.4:+9926819 | MS.gene57215:CDS |
| TCAGGAGGAGAGTCTGGCCA+TGG | 0.544157 | 5.4:-9929965 | None:intergenic |
| AGAGTCGTGGTTGGGAGACA+CGG | 0.549723 | 5.4:+9926827 | MS.gene57215:CDS |
| TGAGGAAACCATGCCAATGC+CGG | 0.551614 | 5.4:+9928356 | MS.gene57215:CDS |
| AGGATCTTGATGCATTGGAT+GGG | 0.552743 | 5.4:+9928574 | MS.gene57215:CDS |
| ACCATGCCAATGCCGGTGCA+AGG | 0.552760 | 5.4:+9928363 | MS.gene57215:CDS |
| GTGGCGAGTAGAGTCGTGGT+TGG | 0.558097 | 5.4:+9926818 | MS.gene57215:CDS |
| CAGCTGCATCAACAGAATGA+AGG | 0.558512 | 5.4:-9928302 | None:intergenic |
| TCAAGATCCTTAATCCACTC+TGG | 0.559323 | 5.4:-9928561 | None:intergenic |
| CGCCGGAATCACTGTTCCGG+TGG | 0.559732 | 5.4:+9926757 | MS.gene57215:CDS |
| TTGTAATGGTACTGATAAGT+TGG | 0.564365 | 5.4:+9928392 | MS.gene57215:CDS |
| ACGGGATCCGGATTCGGCCA+TGG | 0.566818 | 5.4:+9926846 | MS.gene57215:CDS |
| TGGATTGTGGTGGAAGCTGG+TGG | 0.567047 | 5.4:+9927064 | MS.gene57215:CDS |
| TCATTAGATGGGAGTTCAGG+AGG | 0.569861 | 5.4:-9929980 | None:intergenic |
| GAATTCCAGATTACTTTGGA+AGG | 0.571302 | 5.4:+9928524 | MS.gene57215:CDS |
| TGCAGTTTACATTGATGACC+GGG | 0.572154 | 5.4:+9928458 | MS.gene57215:CDS |
| ATGGTACTGATAAGTTGGTC+GGG | 0.572519 | 5.4:+9928397 | MS.gene57215:CDS |
| GATTCCGGCGCCGGTGCCGG+AGG | 0.573917 | 5.4:-9926744 | None:intergenic |
| ATGGCCGCATCCGGATCCTG+TGG | 0.574190 | 5.4:+9926865 | MS.gene57215:CDS |
| ACTTCCACAGGATCCGGATG+CGG | 0.575433 | 5.4:-9926869 | None:intergenic |
| ACATTCTGTTGAGTTTCCAC+CGG | 0.578267 | 5.4:-9926773 | None:intergenic |
| CGTAGAACAAACAGCTTCAG+AGG | 0.580812 | 5.4:+9926548 | MS.gene57215:CDS |
| GACCTGTACACCAATCACTT+TGG | 0.581284 | 5.4:-9930110 | None:intergenic |
| TGATCTGATTTGGATTGTGG+TGG | 0.581726 | 5.4:+9927054 | MS.gene57215:CDS |
| TTAGATTCAGATAACGGCGC+CGG | 0.583256 | 5.4:+9926572 | MS.gene57215:CDS |
| TCCCATCGAAACGCACTCCA+TGG | 0.588526 | 5.4:+9929948 | MS.gene57215:CDS |
| CTTGATGCATTGGATGGGGA+TGG | 0.588763 | 5.4:+9928579 | MS.gene57215:CDS |
| AATGGTACTGATAAGTTGGT+CGG | 0.589439 | 5.4:+9928396 | MS.gene57215:CDS |
| CAGACAGCAAATTCCCTGCT+CGG | 0.596900 | 5.4:+9928712 | MS.gene57215:CDS |
| TGTCTATCCTCCCACAAACT+GGG | 0.597037 | 5.4:-9927163 | None:intergenic |
| GTGAGAAAAGAGAAGCTGGA+TGG | 0.604430 | 5.4:+9928180 | MS.gene57215:CDS |
| GCAACCACCAAAGCAAAACA+TGG | 0.606572 | 5.4:-9928674 | None:intergenic |
| GTAGAACCACTAGGGAGTTG+TGG | 0.607713 | 5.4:+9928648 | MS.gene57215:CDS |
| GTGGAAGTAATGAAAGCGCA+TGG | 0.608289 | 5.4:+9926884 | MS.gene57215:CDS |
| GAGTCGTGGTTGGGAGACAC+GGG | 0.613626 | 5.4:+9926828 | MS.gene57215:CDS |
| ACCTCTGTGGTAGAACCACT+AGG | 0.613698 | 5.4:+9928639 | MS.gene57215:CDS |
| GGATCTTGATGCATTGGATG+GGG | 0.614063 | 5.4:+9928575 | MS.gene57215:CDS |
| GATGGGACTGTGATGTCCAA+AGG | 0.622491 | 5.4:-9929932 | None:intergenic |
| AAAATCGGAAGCCGAGAACG+AGG | 0.625000 | 5.4:-9926658 | None:intergenic |
| GGGACTGTGATGTCCAAAGG+AGG | 0.626469 | 5.4:-9929929 | None:intergenic |
| ATTCATTACGATATACGGGA+AGG | 0.635243 | 5.4:+9928433 | MS.gene57215:CDS |
| TTACAAGCAGGACCTTGCAC+CGG | 0.643021 | 5.4:-9928375 | None:intergenic |
| GAAAATGCCCAGTTTGTGGG+AGG | 0.647991 | 5.4:+9927156 | MS.gene57215:CDS |
| ACTAGCCAGAAAATTGTCGC+CGG | 0.649362 | 5.4:-9926608 | None:intergenic |
| CCTCTGTGGTAGAACCACTA+GGG | 0.659169 | 5.4:+9928640 | MS.gene57215:CDS |
| TTATCAGTACCATTACAAGC+AGG | 0.660972 | 5.4:-9928387 | None:intergenic |
| GGTGCCGGAGGTGAATGGAA+CGG | 0.663294 | 5.4:-9926732 | None:intergenic |
| GGACTGTGATGTCCAAAGGA+GGG | 0.672528 | 5.4:-9929928 | None:intergenic |
| ATTCAGAGTGTGAAATGGAT+CGG | 0.672674 | 5.4:+9928258 | MS.gene57215:CDS |
| TGAAAAGTCCTCACATACGT+TGG | 0.684360 | 5.4:-9926983 | None:intergenic |
| GGTAGTGGCGAGTAGAGTCG+TGG | 0.693719 | 5.4:+9926814 | MS.gene57215:CDS |
| TTTGCTCAAGAGTACCTCTG+TGG | 0.694643 | 5.4:+9928626 | MS.gene57215:CDS |
| TGGCGTCCACAACTCCCTAG+TGG | 0.699177 | 5.4:-9928654 | None:intergenic |
| GTACTCTTGAGCAAAGACAG+TGG | 0.702361 | 5.4:-9928618 | None:intergenic |
| TTGTGACACCAACGTATGTG+AGG | 0.703517 | 5.4:+9926975 | MS.gene57215:CDS |
| GTACTGATAAGTTGGTCGGG+TGG | 0.704370 | 5.4:+9928400 | MS.gene57215:CDS |
| ATGTTGACGATAAGCCAGAG+TGG | 0.723393 | 5.4:+9928547 | MS.gene57215:CDS |
| CCCTAGTGGTTCTACCACAG+AGG | 0.724372 | 5.4:-9928640 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAATAATAAAAAAAA+AGG | - | chr5.4:9928096-9928115 | None:intergenic | 0.0% |
| !! | ATAAAAATAATAAAAAAAAA+GGG | - | chr5.4:9928095-9928114 | None:intergenic | 0.0% |
| !! | AAAAATAATAAAAAAAAAGG+GGG | - | chr5.4:9928093-9928112 | None:intergenic | 10.0% |
| !!! | TGATTTTAGTCTTAAATTTA+TGG | + | chr5.4:9927752-9927771 | MS.gene57215:intron | 15.0% |
| !!! | TTTTACTTGATTTGTTATTA+TGG | + | chr5.4:9927251-9927270 | MS.gene57215:intron | 15.0% |
| !! | AATGAAAGATTCAATTTATG+TGG | + | chr5.4:9929294-9929313 | MS.gene57215:intron | 20.0% |
| !! | ATAATCATGACTATCTTAAT+AGG | + | chr5.4:9929025-9929044 | MS.gene57215:intron | 20.0% |
| !! | ATACAATTGGATATAATGAT+TGG | + | chr5.4:9929420-9929439 | MS.gene57215:intron | 20.0% |
| !! | ATGAAAGATTCAATTTATGT+GGG | + | chr5.4:9929295-9929314 | MS.gene57215:intron | 20.0% |
| !! | ATTAAGATAGTCATGATTAT+AGG | - | chr5.4:9929025-9929044 | None:intergenic | 20.0% |
| !! | CAAATATGCAAATAAATACA+AGG | - | chr5.4:9929850-9929869 | None:intergenic | 20.0% |
| !! | GATTAAAGATTATTCATGTT+GGG | + | chr5.4:9927125-9927144 | MS.gene57215:CDS | 20.0% |
| !! | GTATTTAGTAATTAAGTCAA+AGG | - | chr5.4:9927996-9928015 | None:intergenic | 20.0% |
| !! | TACAATTGGATATAATGATT+GGG | + | chr5.4:9929421-9929440 | MS.gene57215:intron | 20.0% |
| !! | TGATAGTAATATGCATAATA+TGG | + | chr5.4:9928221-9928240 | MS.gene57215:CDS | 20.0% |
| !!! | AAGTAAAAGCATAAACTAAA+AGG | - | chr5.4:9927239-9927258 | None:intergenic | 20.0% |
| !!! | ACTTTTTCATTTTCATTAGA+TGG | - | chr5.4:9929995-9930014 | None:intergenic | 20.0% |
| !!! | ATTGATTTTAACCATAAAAG+TGG | - | chr5.4:9927831-9927850 | None:intergenic | 20.0% |
| !!! | ATTTATTTCTAGGTTCTTAT+AGG | + | chr5.4:9929753-9929772 | MS.gene57215:intron | 20.0% |
| !!! | CTTTTTCATTTTCATTAGAT+GGG | - | chr5.4:9929994-9930013 | None:intergenic | 20.0% |
| !!! | TTGATTTTAACCATAAAAGT+GGG | - | chr5.4:9927830-9927849 | None:intergenic | 20.0% |
| !!! | TTGTAAAATTGATTTTGTCA+TGG | + | chr5.4:9927661-9927680 | MS.gene57215:intron | 20.0% |
| ! | ACTTTATGACTTTCTTATAC+AGG | + | chr5.4:9929323-9929342 | MS.gene57215:intron | 25.0% |
| ! | ATAACATTTCTACTCCAATA+TGG | - | chr5.4:9929196-9929215 | None:intergenic | 25.0% |
| ! | ATGTTGTTAAAATGTGATCA+TGG | + | chr5.4:9929729-9929748 | MS.gene57215:intron | 25.0% |
| ! | ATTCTAAGCAATGTTCTTAT+GGG | - | chr5.4:9929164-9929183 | None:intergenic | 25.0% |
| ! | CTTCAATTCATTACGATATA+CGG | + | chr5.4:9928428-9928447 | MS.gene57215:CDS | 25.0% |
| ! | GAAATCATTAACAAGTGATT+TGG | - | chr5.4:9929541-9929560 | None:intergenic | 25.0% |
| ! | GGATTAAAGATTATTCATGT+TGG | + | chr5.4:9927124-9927143 | MS.gene57215:CDS | 25.0% |
| ! | TATTCTAAGCAATGTTCTTA+TGG | - | chr5.4:9929165-9929184 | None:intergenic | 25.0% |
| ! | TATTGGAGTAGAAATGTTAT+AGG | + | chr5.4:9929196-9929215 | MS.gene57215:intron | 25.0% |
| ! | TGAATGTATTTGTGTAAAAG+TGG | - | chr5.4:9927784-9927803 | None:intergenic | 25.0% |
| ! | TGAATTGAATGACAAGTATA+AGG | + | chr5.4:9927538-9927557 | MS.gene57215:intron | 25.0% |
| ! | TTCAATTCATTACGATATAC+GGG | + | chr5.4:9928429-9928448 | MS.gene57215:CDS | 25.0% |
| !! | AAATTTTATGTCTGAGAATG+GGG | + | chr5.4:9929635-9929654 | MS.gene57215:intron | 25.0% |
| !! | ATGTGAAAGGATTTTATGTT+TGG | + | chr5.4:9927498-9927517 | MS.gene57215:intron | 25.0% |
| !! | CAAATTTTATGTCTGAGAAT+GGG | + | chr5.4:9929634-9929653 | MS.gene57215:intron | 25.0% |
| !! | GTCAAACAATTCACATTTTA+GGG | - | chr5.4:9928912-9928931 | None:intergenic | 25.0% |
| !! | TGAAAACGTTTAGAATATAG+AGG | - | chr5.4:9928750-9928769 | None:intergenic | 25.0% |
| !! | TGATCATGGAATTTATTTCT+AGG | + | chr5.4:9929743-9929762 | MS.gene57215:intron | 25.0% |
| !! | TGTCAAACAATTCACATTTT+AGG | - | chr5.4:9928913-9928932 | None:intergenic | 25.0% |
| !! | TTAGATCAAAATGTTGGTAA+CGG | + | chr5.4:9929493-9929512 | MS.gene57215:intron | 25.0% |
| !! | TTTTGTACTTCAATTTTCGA+CGG | + | chr5.4:9929782-9929801 | MS.gene57215:intron | 25.0% |
| !!! | AAAATTGATTTTGTCATGGT+TGG | + | chr5.4:9927665-9927684 | MS.gene57215:intron | 25.0% |
| !!! | GATTTGTTAGATCAAAATGT+TGG | + | chr5.4:9929487-9929506 | MS.gene57215:intron | 25.0% |
| !!! | TATTTGGTTTCAAGTTTCTA+GGG | + | chr5.4:9927619-9927638 | MS.gene57215:intron | 25.0% |
| !!! | TCTAACAAATCCTATTTTTC+TGG | - | chr5.4:9929478-9929497 | None:intergenic | 25.0% |
| !!! | TGTTTTTTACACTATCGTAT+TGG | - | chr5.4:9928842-9928861 | None:intergenic | 25.0% |
| AACAGAATGTTCTAACAAAC+GGG | + | chr5.4:9926786-9926805 | MS.gene57215:CDS | 30.0% | |
| AATTGGATATAATGATTGGG+TGG | + | chr5.4:9929424-9929443 | MS.gene57215:intron | 30.0% | |
| AATTTGACATCATGTGTGTT+TGG | + | chr5.4:9929702-9929721 | MS.gene57215:intron | 30.0% | |
| ACAATCCAAATCAGATCATA+AGG | - | chr5.4:9927052-9927071 | None:intergenic | 30.0% | |
| AGAAAACAAGACGAGAAAAT+CGG | - | chr5.4:9926676-9926695 | None:intergenic | 30.0% | |
| AGTGAATTGTTAGATGTGAA+AGG | + | chr5.4:9927485-9927504 | MS.gene57215:intron | 30.0% | |
| ATCAGTCTCTAATTGTATGT+CGG | + | chr5.4:9929389-9929408 | MS.gene57215:intron | 30.0% | |
| ATGAAATTCAGAGTGTGAAA+TGG | + | chr5.4:9928253-9928272 | MS.gene57215:CDS | 30.0% | |
| ATTGCACTAATTGTAGAAGT+AGG | - | chr5.4:9929677-9929696 | None:intergenic | 30.0% | |
| ATTGGATATAATGATTGGGT+GGG | + | chr5.4:9929425-9929444 | MS.gene57215:intron | 30.0% | |
| CAACAGAATGTTCTAACAAA+CGG | + | chr5.4:9926785-9926804 | MS.gene57215:CDS | 30.0% | |
| CAAGTAGAATTCATTCTACA+AGG | - | chr5.4:9927699-9927718 | None:intergenic | 30.0% | |
| CACAAGGAAAAATCAACAAA+AGG | - | chr5.4:9928147-9928166 | None:intergenic | 30.0% | |
| CATAGAAATAAGACATCGTT+TGG | - | chr5.4:9928796-9928815 | None:intergenic | 30.0% | |
| CGTATATCGTAATGAATTGA+AGG | - | chr5.4:9928430-9928449 | None:intergenic | 30.0% | |
| CGTTTGGCAAATGAAAATTA+CGG | - | chr5.4:9928780-9928799 | None:intergenic | 30.0% | |
| GAAATAGCATCATATAGTCA+GGG | - | chr5.4:9929890-9929909 | None:intergenic | 30.0% | |
| GATTTGCAGTAGAATCTTTA+TGG | + | chr5.4:9927287-9927306 | MS.gene57215:intron | 30.0% | |
| GCATTACAAGGTTTCAAAAA+AGG | - | chr5.4:9927974-9927993 | None:intergenic | 30.0% | |
| GTTTGGCAAATGAAAATTAC+GGG | - | chr5.4:9928779-9928798 | None:intergenic | 30.0% | |
| TACATAATCCATGCACTATT+TGG | - | chr5.4:9929813-9929832 | None:intergenic | 30.0% | |
| TATATGTTTGATTCCACTTC+TGG | - | chr5.4:9927884-9927903 | None:intergenic | 30.0% | |
| TGAAAAAAATTCCGCACAAA+AGG | + | chr5.4:9929267-9929286 | MS.gene57215:intron | 30.0% | |
| TGAAATAGCATCATATAGTC+AGG | - | chr5.4:9929891-9929910 | None:intergenic | 30.0% | |
| TGTTGAATTCCAGATTACTT+TGG | + | chr5.4:9928520-9928539 | MS.gene57215:CDS | 30.0% | |
| TGTTTGAATAATTAGTGTCG+CGG | + | chr5.4:9927315-9927334 | MS.gene57215:intron | 30.0% | |
| TTGCACTAATTGTAGAAGTA+GGG | - | chr5.4:9929676-9929695 | None:intergenic | 30.0% | |
| ! | AAACGTTTAGAATATAGAGG+TGG | - | chr5.4:9928747-9928766 | None:intergenic | 30.0% |
| ! | AACGTTTAGAATATAGAGGT+GGG | - | chr5.4:9928746-9928765 | None:intergenic | 30.0% |
| ! | AAGTTAGAATTTGCAGCTTT+TGG | + | chr5.4:9927719-9927738 | MS.gene57215:intron | 30.0% |
| ! | AATGAACAGAGATTGTTGTT+TGG | + | chr5.4:9926926-9926945 | MS.gene57215:CDS | 30.0% |
| ! | AATTTTATGTCTGAGAATGG+GGG | + | chr5.4:9929636-9929655 | MS.gene57215:intron | 30.0% |
| ! | GCAAATTTTATGTCTGAGAA+TGG | + | chr5.4:9929633-9929652 | MS.gene57215:intron | 30.0% |
| ! | TGCTGTGTTCTTAATAGTTT+TGG | - | chr5.4:9929616-9929635 | None:intergenic | 30.0% |
| ! | TTTCATTTTCTCCTTTTGTG+CGG | - | chr5.4:9929281-9929300 | None:intergenic | 30.0% |
| ! | TTTGTACTTCAATTTTCGAC+GGG | + | chr5.4:9929783-9929802 | MS.gene57215:intron | 30.0% |
| !! | ACATTTTAGGGAGTAGTTTT+TGG | - | chr5.4:9928900-9928919 | None:intergenic | 30.0% |
| !! | ATTAAGTCAAAGGCATTACA+AGG | - | chr5.4:9927986-9928005 | None:intergenic | 30.0% |
| !! | GTATTTGGTTTCAAGTTTCT+AGG | + | chr5.4:9927618-9927637 | MS.gene57215:intron | 30.0% |
| !! | TCACAACAATCACTTTTCTA+GGG | - | chr5.4:9926961-9926980 | None:intergenic | 30.0% |
| !! | TCTTCATTGGTTCAAAAAGA+AGG | + | chr5.4:9928330-9928349 | MS.gene57215:CDS | 30.0% |
| !! | TGATTCTGTGAAGTTGATTT+TGG | + | chr5.4:9927457-9927476 | MS.gene57215:intron | 30.0% |
| !! | TTACATTCAACCCACTTTTA+TGG | + | chr5.4:9927817-9927836 | MS.gene57215:intron | 30.0% |
| !! | TTATGATCTGATTTGGATTG+TGG | + | chr5.4:9927051-9927070 | MS.gene57215:CDS | 30.0% |
| !! | TTGTAATGGTACTGATAAGT+TGG | + | chr5.4:9928392-9928411 | MS.gene57215:CDS | 30.0% |
| !!! | AATCCTATTTTTCTGGAGTT+AGG | - | chr5.4:9929471-9929490 | None:intergenic | 30.0% |
| !!! | TTGTTGATTTTTCCTTGTGA+TGG | + | chr5.4:9928148-9928167 | MS.gene57215:intron | 30.0% |
| AACACACACTAAACCACATT+CGG | - | chr5.4:9927401-9927420 | None:intergenic | 35.0% | |
| AACATCCTTCCAAAGTAATC+TGG | - | chr5.4:9928532-9928551 | None:intergenic | 35.0% | |
| AATGTGGTTTAGTGTGTGTT+TGG | + | chr5.4:9927401-9927420 | MS.gene57215:intron | 35.0% | |
| AGAATACACTGCTACCATAT+TGG | + | chr5.4:9929179-9929198 | MS.gene57215:intron | 35.0% | |
| AGAGGCTTAGATTCAGATAA+CGG | + | chr5.4:9926566-9926585 | MS.gene57215:CDS | 35.0% | |
| ATGATTGAATATGCCGAATG+TGG | + | chr5.4:9927385-9927404 | MS.gene57215:intron | 35.0% | |
| ATTCAGAGTGTGAAATGGAT+CGG | + | chr5.4:9928258-9928277 | MS.gene57215:CDS | 35.0% | |
| ATTCATTACGATATACGGGA+AGG | + | chr5.4:9928433-9928452 | MS.gene57215:CDS | 35.0% | |
| CATCATATAGTCAGGGATAT+AGG | - | chr5.4:9929883-9929902 | None:intergenic | 35.0% | |
| CATGATTCTCCGCAATATAA+GGG | - | chr5.4:9927368-9927387 | None:intergenic | 35.0% | |
| CGACAAAATTTGAATGGTCT+GGG | + | chr5.4:9928493-9928512 | MS.gene57215:CDS | 35.0% | |
| GAATTCCAGATTACTTTGGA+AGG | + | chr5.4:9928524-9928543 | MS.gene57215:CDS | 35.0% | |
| GATTAAGGATCTTGATGCAT+TGG | + | chr5.4:9928569-9928588 | MS.gene57215:CDS | 35.0% | |
| GCTGAAGTCTATGATCAAAT+AGG | - | chr5.4:9929519-9929538 | None:intergenic | 35.0% | |
| GTCGGGTTAATTGATACAAT+TGG | + | chr5.4:9929407-9929426 | MS.gene57215:intron | 35.0% | |
| TAAGTAAGAACTGCATAAGC+TGG | - | chr5.4:9929109-9929128 | None:intergenic | 35.0% | |
| TACTGTCTAGTGATAATAGC+TGG | + | chr5.4:9929242-9929261 | MS.gene57215:intron | 35.0% | |
| TCAGTCTCTAATTGTATGTC+GGG | + | chr5.4:9929390-9929409 | MS.gene57215:intron | 35.0% | |
| TCATGATTCTCCGCAATATA+AGG | - | chr5.4:9927369-9927388 | None:intergenic | 35.0% | |
| TGCAGCTGAAATTTCTTCAT+TGG | + | chr5.4:9928317-9928336 | MS.gene57215:CDS | 35.0% | |
| TGGAACGGTGTAAATATTAG+TGG | - | chr5.4:9926720-9926739 | None:intergenic | 35.0% | |
| TGTTGCCGACAAAATTTGAA+TGG | + | chr5.4:9928487-9928506 | MS.gene57215:CDS | 35.0% | |
| TTACTATACAATCAGCCTGT+AGG | - | chr5.4:9929349-9929368 | None:intergenic | 35.0% | |
| TTATCAGTACCATTACAAGC+AGG | - | chr5.4:9928390-9928409 | None:intergenic | 35.0% | |
| TTCACAACAAGACAACAATC+TGG | - | chr5.4:9927951-9927970 | None:intergenic | 35.0% | |
| TTGTGCCTTATGATCTGATT+TGG | + | chr5.4:9927044-9927063 | MS.gene57215:CDS | 35.0% | |
| TTTCTAGGTTCTTATAGGTC+AGG | + | chr5.4:9929758-9929777 | MS.gene57215:intron | 35.0% | |
| ! | AATTAGTGTCGCGGTTTTTA+TGG | + | chr5.4:9927324-9927343 | MS.gene57215:intron | 35.0% |
| ! | ACGTTTAGAATATAGAGGTG+GGG | - | chr5.4:9928745-9928764 | None:intergenic | 35.0% |
| ! | ACTTGTTAATGATTTCCCAG+GGG | + | chr5.4:9929545-9929564 | MS.gene57215:intron | 35.0% |
| ! | CACTTGTTAATGATTTCCCA+GGG | + | chr5.4:9929544-9929563 | MS.gene57215:intron | 35.0% |
| ! | CCAGACCATTCAAATTTTGT+CGG | - | chr5.4:9928495-9928514 | None:intergenic | 35.0% |
| ! | GTAACTGCTGAGTTTTCTTT+CGG | - | chr5.4:9928981-9929000 | None:intergenic | 35.0% |
| ! | TCACTTGTTAATGATTTCCC+AGG | + | chr5.4:9929543-9929562 | MS.gene57215:intron | 35.0% |
| ! | TCCAGATTTTCCAATAATCG+AGG | - | chr5.4:9927107-9927126 | None:intergenic | 35.0% |
| ! | TTTTCATTAGATGGGAGTTC+AGG | - | chr5.4:9929986-9930005 | None:intergenic | 35.0% |
| !! | AATGGTACTGATAAGTTGGT+CGG | + | chr5.4:9928396-9928415 | MS.gene57215:CDS | 35.0% |
| !! | ATGATGCTATTTCATGCAGA+TGG | + | chr5.4:9929897-9929916 | MS.gene57215:intron | 35.0% |
| !! | ATTTTTCCTTGTGATGGAAC+AGG | + | chr5.4:9928154-9928173 | MS.gene57215:intron | 35.0% |
| !! | GTCACAACAATCACTTTTCT+AGG | - | chr5.4:9926962-9926981 | None:intergenic | 35.0% |
| !! | TGATGCTATTTCATGCAGAT+GGG | + | chr5.4:9929898-9929917 | MS.gene57215:intron | 35.0% |
| !! | TTCTAGCTTCAAGTCAGAAT+CGG | + | chr5.4:9927594-9927613 | MS.gene57215:intron | 35.0% |
| !!! | AGTTTTTGGCTTTGAGCTTT+TGG | - | chr5.4:9928886-9928905 | None:intergenic | 35.0% |
| !!! | ATTTTCTGGCTAGTACTTCA+CGG | + | chr5.4:9926617-9926636 | MS.gene57215:CDS | 35.0% |
| !!! | GTTTTTGGCTTTGAGCTTTT+GGG | - | chr5.4:9928885-9928904 | None:intergenic | 35.0% |
| AAGCATGACACCAAAGTGAT+TGG | + | chr5.4:9930100-9930119 | MS.gene57215:CDS | 40.0% | |
| AAGGATCTTGATGCATTGGA+TGG | + | chr5.4:9928573-9928592 | MS.gene57215:CDS | 40.0% | |
| AATGAGACTGCCTCGATTAT+TGG | + | chr5.4:9927094-9927113 | MS.gene57215:CDS | 40.0% | |
| ACATTCTGTTGAGTTTCCAC+CGG | - | chr5.4:9926776-9926795 | None:intergenic | 40.0% | |
| ACTTTCTTATACAGGCCTAC+AGG | + | chr5.4:9929331-9929350 | MS.gene57215:intron | 40.0% | |
| AGGATCTTGATGCATTGGAT+GGG | + | chr5.4:9928574-9928593 | MS.gene57215:CDS | 40.0% | |
| ATAATGATTGGGTGGGTGAT+AGG | + | chr5.4:9929432-9929451 | MS.gene57215:intron | 40.0% | |
| ATCAGAAAATGCCCAGTTTG+TGG | + | chr5.4:9927152-9927171 | MS.gene57215:CDS | 40.0% | |
| CAAGTCAGAATCGGTGTATT+TGG | + | chr5.4:9927603-9927622 | MS.gene57215:intron | 40.0% | |
| CCGACAAAATTTGAATGGTC+TGG | + | chr5.4:9928492-9928511 | MS.gene57215:CDS | 40.0% | |
| GATTGTGAGAAAAGAGAAGC+TGG | + | chr5.4:9928176-9928195 | MS.gene57215:CDS | 40.0% | |
| GCCTCGATTATTGGAAAATC+TGG | + | chr5.4:9927103-9927122 | MS.gene57215:CDS | 40.0% | |
| GGTTCAAAAAGAAGGAGATG+AGG | + | chr5.4:9928338-9928357 | MS.gene57215:CDS | 40.0% | |
| TCAAGATCCTTAATCCACTC+TGG | - | chr5.4:9928564-9928583 | None:intergenic | 40.0% | |
| TCAGAAAATGCCCAGTTTGT+GGG | + | chr5.4:9927153-9927172 | MS.gene57215:CDS | 40.0% | |
| TGAAAAGTCCTCACATACGT+TGG | - | chr5.4:9926986-9927005 | None:intergenic | 40.0% | |
| TGATGCGTCTTCATGCTTTA+AGG | + | chr5.4:9927200-9927219 | MS.gene57215:CDS | 40.0% | |
| TGGGCATCATGTGATGATAT+AGG | + | chr5.4:9929070-9929089 | MS.gene57215:intron | 40.0% | |
| TGTCACGATCCCTTATATTG+CGG | + | chr5.4:9927356-9927375 | MS.gene57215:intron | 40.0% | |
| TGTTCTAACAAACGGGAGTT+CGG | + | chr5.4:9926793-9926812 | MS.gene57215:CDS | 40.0% | |
| TTACTTAAGCACCCACTACA+AGG | + | chr5.4:9929122-9929141 | MS.gene57215:intron | 40.0% | |
| TTATGGGTCAATGTGACTAG+AGG | - | chr5.4:9929148-9929167 | None:intergenic | 40.0% | |
| TTCATTACTTCCACAGGATC+CGG | - | chr5.4:9926878-9926897 | None:intergenic | 40.0% | |
| TTTCAAGCGATGCATTTGAC+TGG | + | chr5.4:9927001-9927020 | MS.gene57215:CDS | 40.0% | |
| ! | CGTTTAGAATATAGAGGTGG+GGG | - | chr5.4:9928744-9928763 | None:intergenic | 40.0% |
| ! | CTCAGCAGTTACAGTTTTTG+TGG | + | chr5.4:9928989-9929008 | MS.gene57215:intron | 40.0% |
| ! | GTGCAGTTTACATTGATGAC+CGG | + | chr5.4:9928457-9928476 | MS.gene57215:CDS | 40.0% |
| ! | GTTTAGAATATAGAGGTGGG+GGG | - | chr5.4:9928743-9928762 | None:intergenic | 40.0% |
| ! | TCAAATTTTGTCGGCAACAC+TGG | - | chr5.4:9928486-9928505 | None:intergenic | 40.0% |
| ! | TGCAGTTTACATTGATGACC+GGG | + | chr5.4:9928458-9928477 | MS.gene57215:CDS | 40.0% |
| !! | AATGAAAAAGTGTTCGCTGC+AGG | + | chr5.4:9930004-9930023 | MS.gene57215:CDS | 40.0% |
| !! | ATGGTACTGATAAGTTGGTC+GGG | + | chr5.4:9928397-9928416 | MS.gene57215:CDS | 40.0% |
| !! | ATGTTTTGCTTTGGTGGTTG+CGG | + | chr5.4:9928676-9928695 | MS.gene57215:CDS | 40.0% |
| !! | CTCTGAAGCTGTTTGTTCTA+CGG | - | chr5.4:9926550-9926569 | None:intergenic | 40.0% |
| !! | TGATCTGATTTGGATTGTGG+TGG | + | chr5.4:9927054-9927073 | MS.gene57215:CDS | 40.0% |
| !! | TTAGTGTGTGTTTGGTTCTG+TGG | + | chr5.4:9927409-9927428 | MS.gene57215:intron | 40.0% |
| AAATCCAAGCTGTACCCAGA+AGG | - | chr5.4:9929581-9929600 | None:intergenic | 45.0% | |
| AATTGTCGCCGGTGACTTAA+CGG | - | chr5.4:9926600-9926619 | None:intergenic | 45.0% | |
| ACTAGCCAGAAAATTGTCGC+CGG | - | chr5.4:9926611-9926630 | None:intergenic | 45.0% | |
| ATGTCTATCCTCCCACAAAC+TGG | - | chr5.4:9927167-9927186 | None:intergenic | 45.0% | |
| ATGTTGACGATAAGCCAGAG+TGG | + | chr5.4:9928547-9928566 | MS.gene57215:CDS | 45.0% | |
| CACAATCCTGTTCCATCACA+AGG | - | chr5.4:9928163-9928182 | None:intergenic | 45.0% | |
| CACCAAAGTGATTGGTGTAC+AGG | + | chr5.4:9930108-9930127 | MS.gene57215:CDS | 45.0% | |
| CAGCTGCATCAACAGAATGA+AGG | - | chr5.4:9928305-9928324 | None:intergenic | 45.0% | |
| CGTAGAACAAACAGCTTCAG+AGG | + | chr5.4:9926548-9926567 | MS.gene57215:CDS | 45.0% | |
| GACCTGTACACCAATCACTT+TGG | - | chr5.4:9930113-9930132 | None:intergenic | 45.0% | |
| GCAACCACCAAAGCAAAACA+TGG | - | chr5.4:9928677-9928696 | None:intergenic | 45.0% | |
| GCGCCTAACTCCAGAAAAAT+AGG | + | chr5.4:9929465-9929484 | MS.gene57215:intron | 45.0% | |
| GGATCTTGATGCATTGGATG+GGG | + | chr5.4:9928575-9928594 | MS.gene57215:CDS | 45.0% | |
| GTACTCTTGAGCAAAGACAG+TGG | - | chr5.4:9928621-9928640 | None:intergenic | 45.0% | |
| GTGAGAAAAGAGAAGCTGGA+TGG | + | chr5.4:9928180-9928199 | MS.gene57215:CDS | 45.0% | |
| TAATTGTAGAAGTAGGGCCC+TGG | - | chr5.4:9929670-9929689 | None:intergenic | 45.0% | |
| TATGTCTGAGAATGGGGGAA+GGG | + | chr5.4:9929641-9929660 | MS.gene57215:intron | 45.0% | |
| TCATTAGATGGGAGTTCAGG+AGG | - | chr5.4:9929983-9930002 | None:intergenic | 45.0% | |
| TCTCTTACTTCTACTGCGTC+TGG | - | chr5.4:9930080-9930099 | None:intergenic | 45.0% | |
| TGCGCTTTCATTACTTCCAC+AGG | - | chr5.4:9926884-9926903 | None:intergenic | 45.0% | |
| TGCTTAATCAGCCTCGTTCT+CGG | + | chr5.4:9926647-9926666 | MS.gene57215:CDS | 45.0% | |
| TGTCTATCCTCCCACAAACT+GGG | - | chr5.4:9927166-9927185 | None:intergenic | 45.0% | |
| TTATGTCTGAGAATGGGGGA+AGG | + | chr5.4:9929640-9929659 | MS.gene57215:intron | 45.0% | |
| TTGTGACACCAACGTATGTG+AGG | + | chr5.4:9926975-9926994 | MS.gene57215:CDS | 45.0% | |
| ! | AATTTTGCGTGCTCCAGAAG+TGG | + | chr5.4:9927868-9927887 | MS.gene57215:intron | 45.0% |
| ! | AGCTGCATGCACTGATACTT+GGG | + | chr5.4:9929051-9929070 | MS.gene57215:intron | 45.0% |
| ! | AGGGTCAAAGTCGATTCTAG+AGG | + | chr5.4:9927638-9927657 | MS.gene57215:intron | 45.0% |
| ! | ATTTGGATTGTGGTGGAAGC+TGG | + | chr5.4:9927061-9927080 | MS.gene57215:CDS | 45.0% |
| ! | GTGGAAGTAATGAAAGCGCA+TGG | + | chr5.4:9926884-9926903 | MS.gene57215:CDS | 45.0% |
| ! | TAGCTGCATGCACTGATACT+TGG | + | chr5.4:9929050-9929069 | MS.gene57215:intron | 45.0% |
| ! | TTAGATTCAGATAACGGCGC+CGG | + | chr5.4:9926572-9926591 | MS.gene57215:CDS | 45.0% |
| !! | CGATAAGCCAGAGTGGATTA+AGG | + | chr5.4:9928554-9928573 | MS.gene57215:CDS | 45.0% |
| !! | GAAATGGATCGGTGCTGTTT+CGG | + | chr5.4:9928269-9928288 | MS.gene57215:CDS | 45.0% |
| !! | TGTTTTGCTTTGGTGGTTGC+GGG | + | chr5.4:9928677-9928696 | MS.gene57215:CDS | 45.0% |
| !! | TTTGCTCAAGAGTACCTCTG+TGG | + | chr5.4:9928626-9928645 | MS.gene57215:CDS | 45.0% |
| !!! | TTGGCTTTGAGCTTTTGGGT+GGG | - | chr5.4:9928881-9928900 | None:intergenic | 45.0% |
| !!! | TTTGGCTTTGAGCTTTTGGG+TGG | - | chr5.4:9928882-9928901 | None:intergenic | 45.0% |
| !! | TAAAAATAATAAAAAAAAAG+GGG | - | chr5.4:9928094-9928113 | None:intergenic | 5.0% |
| AAAATCGGAAGCCGAGAACG+AGG | - | chr5.4:9926661-9926680 | None:intergenic | 50.0% | |
| AACAAACGGGAGTTCGGTAG+TGG | + | chr5.4:9926799-9926818 | MS.gene57215:CDS | 50.0% | |
| ACCTCTGTGGTAGAACCACT+AGG | + | chr5.4:9928639-9928658 | MS.gene57215:CDS | 50.0% | |
| ACTTCTACTGCGTCTGGATC+TGG | - | chr5.4:9930074-9930093 | None:intergenic | 50.0% | |
| ATGGGTGATTGACCCTCCTT+TGG | + | chr5.4:9929916-9929935 | MS.gene57215:CDS | 50.0% | |
| ATGTCTGAGAATGGGGGAAG+GGG | + | chr5.4:9929642-9929661 | MS.gene57215:intron | 50.0% | |
| CAGACAGCAAATTCCCTGCT+CGG | + | chr5.4:9928712-9928731 | MS.gene57215:CDS | 50.0% | |
| CCTCTGTGGTAGAACCACTA+GGG | + | chr5.4:9928640-9928659 | MS.gene57215:CDS | 50.0% | |
| CGGGTTGTCCAAATAGTGCA+TGG | + | chr5.4:9929802-9929821 | MS.gene57215:intron | 50.0% | |
| CTTCTACTGCGTCTGGATCT+GGG | - | chr5.4:9930073-9930092 | None:intergenic | 50.0% | |
| CTTGATGCATTGGATGGGGA+TGG | + | chr5.4:9928579-9928598 | MS.gene57215:CDS | 50.0% | |
| GAAAATGCCCAGTTTGTGGG+AGG | + | chr5.4:9927156-9927175 | MS.gene57215:CDS | 50.0% | |
| GATGGGACTGTGATGTCCAA+AGG | - | chr5.4:9929935-9929954 | None:intergenic | 50.0% | |
| GGACTGTGATGTCCAAAGGA+GGG | - | chr5.4:9929931-9929950 | None:intergenic | 50.0% | |
| GTAGAACCACTAGGGAGTTG+TGG | + | chr5.4:9928648-9928667 | MS.gene57215:CDS | 50.0% | |
| GTGCAAGGTCCTGCTTGTAA+TGG | + | chr5.4:9928378-9928397 | MS.gene57215:CDS | 50.0% | |
| TACACCGTTCCATTCACCTC+CGG | + | chr5.4:9926728-9926747 | MS.gene57215:CDS | 50.0% | |
| TGAGGAAACCATGCCAATGC+CGG | + | chr5.4:9928356-9928375 | MS.gene57215:CDS | 50.0% | |
| TTACAAGCAGGACCTTGCAC+CGG | - | chr5.4:9928378-9928397 | None:intergenic | 50.0% | |
| TTCCACCGGAACAGTGATTC+CGG | - | chr5.4:9926762-9926781 | None:intergenic | 50.0% | |
| ! | AGTCACCGGCGACAATTTTC+TGG | + | chr5.4:9926603-9926622 | MS.gene57215:CDS | 50.0% |
| ! | GACGCCATGTTTTGCTTTGG+TGG | + | chr5.4:9928670-9928689 | MS.gene57215:CDS | 50.0% |
| ! | GATTTCCCAGGGGTATGTTC+CGG | + | chr5.4:9929555-9929574 | MS.gene57215:intron | 50.0% |
| ! | GTGACTAGAGGCCTTGTAGT+GGG | - | chr5.4:9929136-9929155 | None:intergenic | 50.0% |
| ! | GTGGACGCCATGTTTTGCTT+TGG | + | chr5.4:9928667-9928686 | MS.gene57215:CDS | 50.0% |
| ! | TGTGACTAGAGGCCTTGTAG+TGG | - | chr5.4:9929137-9929156 | None:intergenic | 50.0% |
| !! | CTTTGAGCTTTTGGGTGGGT+TGG | - | chr5.4:9928877-9928896 | None:intergenic | 50.0% |
| !! | GTACTGATAAGTTGGTCGGG+TGG | + | chr5.4:9928400-9928419 | MS.gene57215:CDS | 50.0% |
| !! | TTTCTGGAGTTAGGCGCTAC+TGG | - | chr5.4:9929462-9929481 | None:intergenic | 50.0% |
| ACTTCCACAGGATCCGGATG+CGG | - | chr5.4:9926872-9926891 | None:intergenic | 55.0% | |
| AGAGTCGTGGTTGGGAGACA+CGG | + | chr5.4:9926827-9926846 | MS.gene57215:CDS | 55.0% | |
| GCCATGGAGTGCGTTTCGAT+GGG | - | chr5.4:9929952-9929971 | None:intergenic | 55.0% | |
| GGGACTGTGATGTCCAAAGG+AGG | - | chr5.4:9929932-9929951 | None:intergenic | 55.0% | |
| TCCCATCGAAACGCACTCCA+TGG | + | chr5.4:9929948-9929967 | MS.gene57215:CDS | 55.0% | |
| TGGCGAGTAGAGTCGTGGTT+GGG | + | chr5.4:9926819-9926838 | MS.gene57215:CDS | 55.0% | |
| ! | CCCTAGTGGTTCTACCACAG+AGG | - | chr5.4:9928643-9928662 | None:intergenic | 55.0% |
| ! | TGGATTGTGGTGGAAGCTGG+TGG | + | chr5.4:9927064-9927083 | MS.gene57215:CDS | 55.0% |
| !! | TGGATCGGTGCTGTTTCGGT+TGG | + | chr5.4:9928273-9928292 | MS.gene57215:CDS | 55.0% |
| !!! | GCTTTTGGGTGGGTTGGCAT+TGG | - | chr5.4:9928871-9928890 | None:intergenic | 55.0% |
| ACCATGCCAATGCCGGTGCA+AGG | + | chr5.4:9928363-9928382 | MS.gene57215:CDS | 60.0% | |
| AGAAGGCCGGAACATACCCC+TGG | - | chr5.4:9929564-9929583 | None:intergenic | 60.0% | |
| CCAAGCTGTACCCAGAAGGC+CGG | - | chr5.4:9929577-9929596 | None:intergenic | 60.0% | |
| GAAGGCCGGAACATACCCCT+GGG | - | chr5.4:9929563-9929582 | None:intergenic | 60.0% | |
| GAGTCGTGGTTGGGAGACAC+GGG | + | chr5.4:9926828-9926847 | MS.gene57215:CDS | 60.0% | |
| GGAGACACGGGATCCGGATT+CGG | + | chr5.4:9926840-9926859 | MS.gene57215:CDS | 60.0% | |
| GGCCATGGAGTGCGTTTCGA+TGG | - | chr5.4:9929953-9929972 | None:intergenic | 60.0% | |
| GGGAGTTCAGGAGGAGAGTC+TGG | - | chr5.4:9929974-9929993 | None:intergenic | 60.0% | |
| GGGGTATGTTCCGGCCTTCT+GGG | + | chr5.4:9929564-9929583 | MS.gene57215:intron | 60.0% | |
| GTGGCGAGTAGAGTCGTGGT+TGG | + | chr5.4:9926818-9926837 | MS.gene57215:CDS | 60.0% | |
| GTTCCATTCACCTCCGGCAC+CGG | + | chr5.4:9926734-9926753 | MS.gene57215:CDS | 60.0% | |
| TCAGGAGGAGAGTCTGGCCA+TGG | - | chr5.4:9929968-9929987 | None:intergenic | 60.0% | |
| TGGCGTCCACAACTCCCTAG+TGG | - | chr5.4:9928657-9928676 | None:intergenic | 60.0% | |
| TGGTTGGGAGACACGGGATC+CGG | + | chr5.4:9926834-9926853 | MS.gene57215:CDS | 60.0% | |
| TTGTCGGCAACACTGGTGCC+CGG | - | chr5.4:9928479-9928498 | None:intergenic | 60.0% | |
| ! | AGGGGTATGTTCCGGCCTTC+TGG | + | chr5.4:9929563-9929582 | MS.gene57215:intron | 60.0% |
| ! | GGTAGTGGCGAGTAGAGTCG+TGG | + | chr5.4:9926814-9926833 | MS.gene57215:CDS | 60.0% |
| ! | GGTGCCGGAGGTGAATGGAA+CGG | - | chr5.4:9926735-9926754 | None:intergenic | 60.0% |
| !! | ACCTTGCACCGGCATTGGCA+TGG | - | chr5.4:9928367-9928386 | None:intergenic | 60.0% |
| ACAGGATCCGGATGCGGCCA+TGG | - | chr5.4:9926866-9926885 | None:intergenic | 65.0% | |
| ACGGGATCCGGATTCGGCCA+TGG | + | chr5.4:9926846-9926865 | MS.gene57215:CDS | 65.0% | |
| ATGGCCGCATCCGGATCCTG+TGG | + | chr5.4:9926865-9926884 | MS.gene57215:CDS | 65.0% | |
| CCGGCCTTCTGGGTACAGCT+TGG | + | chr5.4:9929574-9929593 | MS.gene57215:intron | 65.0% | |
| CGCCGGAATCACTGTTCCGG+TGG | + | chr5.4:9926757-9926776 | MS.gene57215:CDS | 65.0% | |
| CGGAACAGTGATTCCGGCGC+CGG | - | chr5.4:9926756-9926775 | None:intergenic | 65.0% | |
| GATGCGGCCATGGCCGAATC+CGG | - | chr5.4:9926856-9926875 | None:intergenic | 65.0% | |
| GATTCGGCCATGGCCGCATC+CGG | + | chr5.4:9926856-9926875 | MS.gene57215:CDS | 65.0% | |
| ! | CGGCGCCGGAATCACTGTTC+CGG | + | chr5.4:9926754-9926773 | MS.gene57215:CDS | 65.0% |
| ! | GCAGGACCTTGCACCGGCAT+TGG | - | chr5.4:9928372-9928391 | None:intergenic | 65.0% |
| !! | AGAATGGGGGAAGGGGTGCC+AGG | + | chr5.4:9929649-9929668 | MS.gene57215:intron | 65.0% |
| !! | GAATGGGGGAAGGGGTGCCA+GGG | + | chr5.4:9929650-9929669 | MS.gene57215:intron | 65.0% |
| CGCCGGCGCCGTTAAGTCAC+CGG | + | chr5.4:9926589-9926608 | MS.gene57215:CDS | 70.0% | |
| CGCCGGTGACTTAACGGCGC+CGG | - | chr5.4:9926594-9926613 | None:intergenic | 70.0% | |
| GTGGGGGGACTCACCGAGCA+GGG | - | chr5.4:9928728-9928747 | None:intergenic | 70.0% | |
| !! | AGTGATTCCGGCGCCGGTGC+CGG | - | chr5.4:9926750-9926769 | None:intergenic | 70.0% |
| GGTGGGGGGACTCACCGAGC+AGG | - | chr5.4:9928729-9928748 | None:intergenic | 75.0% | |
| ! | GCGCCGGTGCCGGAGGTGAA+TGG | - | chr5.4:9926740-9926759 | None:intergenic | 75.0% |
| !! | TTCACCTCCGGCACCGGCGC+CGG | + | chr5.4:9926740-9926759 | MS.gene57215:CDS | 75.0% |
| !!! | GATTCCGGCGCCGGTGCCGG+AGG | - | chr5.4:9926747-9926766 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 9926512 | 9930162 | 9926512 | ID=MS.gene57215 |
| chr5.4 | mRNA | 9926512 | 9930162 | 9926512 | ID=MS.gene57215.t1;Parent=MS.gene57215 |
| chr5.4 | exon | 9926512 | 9927221 | 9926512 | ID=MS.gene57215.t1.exon1;Parent=MS.gene57215.t1 |
| chr5.4 | CDS | 9926512 | 9927221 | 9926512 | ID=cds.MS.gene57215.t1;Parent=MS.gene57215.t1 |
| chr5.4 | exon | 9928176 | 9928733 | 9928176 | ID=MS.gene57215.t1.exon2;Parent=MS.gene57215.t1 |
| chr5.4 | CDS | 9928176 | 9928733 | 9928176 | ID=cds.MS.gene57215.t1;Parent=MS.gene57215.t1 |
| chr5.4 | exon | 9929916 | 9930162 | 9929916 | ID=MS.gene57215.t1.exon3;Parent=MS.gene57215.t1 |
| chr5.4 | CDS | 9929916 | 9930162 | 9929916 | ID=cds.MS.gene57215.t1;Parent=MS.gene57215.t1 |
| Gene Sequence |
| Protein sequence |
