Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57225.t1 | XP_003589022.1 | 97.1 | 350 | 10 | 0 | 1 | 350 | 1 | 350 | 2.00E-193 | 684.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57225.t1 | Q944K3 | 77.8 | 338 | 75 | 0 | 6 | 343 | 47 | 384 | 8.0e-151 | 534.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57225.t1 | G7IB89 | 97.1 | 350 | 10 | 0 | 1 | 350 | 1 | 350 | 1.4e-193 | 684.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene57225 | MS.gene072058 | PPI |
| MS.gene57225 | MS.gene047200 | PPI |
| MS.gene57225 | MS.gene00617 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57225.t1 | MTR_1g016440 | 97.143 | 350 | 10 | 0 | 1 | 350 | 1 | 350 | 0.0 | 699 |
| MS.gene57225.t1 | MTR_1g016440 | 94.139 | 273 | 13 | 1 | 1 | 273 | 1 | 270 | 0.0 | 524 |
| MS.gene57225.t1 | MTR_4g109500 | 25.656 | 343 | 213 | 12 | 32 | 344 | 18 | 348 | 6.20e-20 | 91.3 |
| MS.gene57225.t1 | MTR_4g109500 | 25.656 | 343 | 213 | 12 | 32 | 344 | 18 | 348 | 6.23e-20 | 91.3 |
| MS.gene57225.t1 | MTR_3g077160 | 25.342 | 292 | 183 | 9 | 52 | 320 | 45 | 324 | 1.38e-15 | 78.2 |
| MS.gene57225.t1 | MTR_5g004640 | 26.354 | 277 | 177 | 9 | 52 | 311 | 40 | 306 | 1.83e-15 | 77.8 |
| MS.gene57225.t1 | MTR_4g055080 | 26.263 | 297 | 181 | 9 | 52 | 325 | 24 | 305 | 2.26e-15 | 77.0 |
| MS.gene57225.t1 | MTR_3g118535 | 26.374 | 273 | 182 | 7 | 52 | 311 | 37 | 303 | 5.52e-15 | 76.3 |
| MS.gene57225.t1 | MTR_4g055080 | 26.871 | 294 | 174 | 10 | 58 | 325 | 2 | 280 | 8.27e-15 | 75.5 |
| MS.gene57225.t1 | MTR_8g093800 | 25.587 | 383 | 226 | 16 | 3 | 335 | 10 | 383 | 2.17e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57225.t1 | AT5G26040 | 77.419 | 341 | 77 | 0 | 3 | 343 | 44 | 384 | 0.0 | 548 |
| MS.gene57225.t1 | AT5G26040 | 71.006 | 338 | 70 | 1 | 6 | 343 | 47 | 356 | 6.63e-173 | 485 |
| MS.gene57225.t1 | AT5G63110 | 33.333 | 204 | 119 | 8 | 128 | 320 | 118 | 315 | 9.25e-18 | 84.7 |
| MS.gene57225.t1 | AT4G38130 | 26.374 | 273 | 182 | 6 | 52 | 311 | 36 | 302 | 9.31e-17 | 81.6 |
| MS.gene57225.t1 | AT4G38130 | 26.374 | 273 | 182 | 6 | 52 | 311 | 36 | 302 | 1.46e-16 | 81.3 |
| MS.gene57225.t1 | AT5G61060 | 26.452 | 310 | 203 | 9 | 32 | 320 | 26 | 331 | 9.50e-16 | 79.0 |
| MS.gene57225.t1 | AT1G08460 | 23.301 | 309 | 210 | 7 | 36 | 325 | 23 | 323 | 2.82e-15 | 76.6 |
| MS.gene57225.t1 | AT3G44680 | 25.253 | 297 | 184 | 9 | 52 | 325 | 24 | 305 | 1.85e-14 | 74.3 |
| MS.gene57225.t1 | AT5G61060 | 26.433 | 314 | 202 | 10 | 32 | 320 | 26 | 335 | 3.23e-14 | 74.3 |
| MS.gene57225.t1 | AT5G61070 | 24.561 | 285 | 180 | 11 | 62 | 320 | 89 | 364 | 5.23e-13 | 70.5 |
| MS.gene57225.t1 | AT4G33470 | 25.806 | 186 | 129 | 3 | 159 | 335 | 201 | 386 | 6.56e-12 | 66.6 |
| MS.gene57225.t1 | AT1G08460 | 22.780 | 259 | 176 | 5 | 36 | 277 | 23 | 274 | 8.54e-12 | 65.9 |
Find 85 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCGTTTGATTCGTCTAAA+TGG | 0.181388 | 1.4:-5956530 | MS.gene57225:CDS |
| CATCACTGTTCTGCAGAAAA+TGG | 0.209362 | 1.4:-5954819 | MS.gene57225:CDS |
| TGTAAGTTTCTTAATTCTTT+TGG | 0.262598 | 1.4:-5956498 | MS.gene57225:CDS |
| AAAACCTCCTCCCACATTAA+TGG | 0.273424 | 1.4:+5954842 | None:intergenic |
| CCTATTGTCATGCTCACTTC+AGG | 0.309644 | 1.4:-5952489 | MS.gene57225:intron |
| GATCACTGTTATGCAGTCTT+TGG | 0.318259 | 1.4:+5951750 | None:intergenic |
| CTGATGTGTTTCAAGGTTGC+TGG | 0.321961 | 1.4:-5952848 | MS.gene57225:intron |
| TTCCTAATGGATCACCTTCT+AGG | 0.332310 | 1.4:+5952777 | None:intergenic |
| ATTACCTTCAACCTTCCTAA+TGG | 0.340809 | 1.4:+5952764 | None:intergenic |
| GGAATTGGTTGTTACTTTAG+AGG | 0.343735 | 1.4:+5956771 | None:intergenic |
| TCCGTTTGATTCGTCTAAAT+GGG | 0.360447 | 1.4:-5956529 | MS.gene57225:CDS |
| TTTACCAAAGGATATATTCC+AGG | 0.381434 | 1.4:+5954460 | None:intergenic |
| TCTTATGACATATCATTTCT+CGG | 0.392913 | 1.4:-5956653 | MS.gene57225:CDS |
| AGAGTTTGGTAGAGAGGATA+CGG | 0.410858 | 1.4:+5956809 | None:intergenic |
| TCAAGGAAATGGTCATGAAA+TGG | 0.415584 | 1.4:-5954611 | MS.gene57225:CDS |
| GCAGGTTGGAGGAACTATAT+TGG | 0.416403 | 1.4:-5954895 | MS.gene57225:intron |
| CGAAAGTACCTCAATTATCT+TGG | 0.426478 | 1.4:+5955378 | None:intergenic |
| GATTTACCTGTTTCCTGAAT+GGG | 0.426483 | 1.4:+5954988 | None:intergenic |
| GGATTTACCTGTTTCCTGAA+TGG | 0.439631 | 1.4:+5954987 | None:intergenic |
| CTTGATGCACATCAAGGAAA+TGG | 0.443894 | 1.4:-5954622 | MS.gene57225:CDS |
| CCTGAAGTGAGCATGACAAT+AGG | 0.446956 | 1.4:+5952489 | None:intergenic |
| CTCAATTATCTTGGCAACAT+TGG | 0.449351 | 1.4:+5955387 | None:intergenic |
| TGTTCTATATTAGGATTATG+AGG | 0.464505 | 1.4:-5953424 | MS.gene57225:intron |
| AGGTACGTCGAAGTAGAGTT+TGG | 0.467538 | 1.4:+5956795 | None:intergenic |
| CATGAGAGTGTCGTCGGAAG+CGG | 0.470829 | 1.4:+5956837 | None:intergenic |
| TAACCCTGGAATATATCCTT+TGG | 0.472285 | 1.4:-5954464 | MS.gene57225:intron |
| GGCAGACCGAGTCTACATTC+TGG | 0.475079 | 1.4:-5954494 | MS.gene57225:intron |
| GAGTTGTTAGTTTATAATGC+TGG | 0.477061 | 1.4:-5952809 | MS.gene57225:CDS |
| TTTACGTTGCACAAGACCAT+TGG | 0.481724 | 1.4:+5955019 | None:intergenic |
| GAATTGGTTGTTACTTTAGA+GGG | 0.487635 | 1.4:+5956772 | None:intergenic |
| TTGTTCAGTTGAATATATCA+AGG | 0.488156 | 1.4:-5954746 | MS.gene57225:intron |
| GAAATTAGATGAAGCATTCG+AGG | 0.491843 | 1.4:-5953241 | MS.gene57225:intron |
| TTACGTTGCACAAGACCATT+GGG | 0.493432 | 1.4:+5955020 | None:intergenic |
| AAATGATATGTCATAAGAAT+CGG | 0.499520 | 1.4:+5956658 | None:intergenic |
| AAATCAGAAAGTTGAAGTAA+AGG | 0.500918 | 1.4:-5953388 | MS.gene57225:intron |
| ATTGATCTTGATGCACATCA+AGG | 0.501233 | 1.4:-5954628 | MS.gene57225:CDS |
| ATCCTAGAAGGTGATCCATT+AGG | 0.507010 | 1.4:-5952779 | MS.gene57225:CDS |
| GTTTCAAGGTTGCTGGGCGA+AGG | 0.512547 | 1.4:-5952841 | MS.gene57225:intron |
| CCTGTGGCATTGTTTCCCAA+TGG | 0.518965 | 1.4:-5955035 | MS.gene57225:CDS |
| AACTTGCGAAGGAGAGAGGA+TGG | 0.521425 | 1.4:-5954866 | MS.gene57225:CDS |
| CAATGTTGCCAAGATAATTG+AGG | 0.525266 | 1.4:-5955386 | MS.gene57225:intron |
| GATACATGAAGTCCAGTGCT+AGG | 0.527724 | 1.4:-5951833 | MS.gene57225:CDS |
| GCTGGAACTGACATCCTAGA+AGG | 0.531175 | 1.4:-5952791 | MS.gene57225:CDS |
| CGAAGTAGAGTTTGGTAGAG+AGG | 0.537218 | 1.4:+5956803 | None:intergenic |
| TGATCCATTAGGAAGGTTGA+AGG | 0.537244 | 1.4:-5952768 | MS.gene57225:intron |
| TCTATTGGCCATACTATCAT+CGG | 0.540934 | 1.4:+5954582 | None:intergenic |
| GAGAGGATGGGCCATTAATG+TGG | 0.551476 | 1.4:-5954853 | MS.gene57225:CDS |
| TCTCTAAGAGCAATTCCATC+GGG | 0.554567 | 1.4:+5952549 | None:intergenic |
| ATCTCTAAGAGCAATTCCAT+CGG | 0.557639 | 1.4:+5952548 | None:intergenic |
| GCGAAACTTGCGAAGGAGAG+AGG | 0.559522 | 1.4:-5954870 | MS.gene57225:CDS |
| GCATTATAAACTAACAACTC+AGG | 0.561437 | 1.4:+5952812 | None:intergenic |
| ATCATACTTGAATAGTCTGA+AGG | 0.568219 | 1.4:-5955416 | MS.gene57225:CDS |
| ATCTGCGATGACCCTAGCAC+TGG | 0.569570 | 1.4:+5951821 | None:intergenic |
| TTACCAAAGGATATATTCCA+GGG | 0.571772 | 1.4:+5954461 | None:intergenic |
| TGATGTGTTTCAAGGTTGCT+GGG | 0.586550 | 1.4:-5952847 | MS.gene57225:intron |
| TGGGCCATTAATGTGGGAGG+AGG | 0.588432 | 1.4:-5954846 | MS.gene57225:CDS |
| AGAGGATGGGCCATTAATGT+GGG | 0.590581 | 1.4:-5954852 | MS.gene57225:CDS |
| TGCATGCAGATTAGTCCCGA+TGG | 0.591142 | 1.4:-5952564 | MS.gene57225:intron |
| ATGGCATTATGGCAGGTTGG+AGG | 0.594831 | 1.4:-5954906 | MS.gene57225:intron |
| CCCCATTTAGACGAATCAAA+CGG | 0.595653 | 1.4:+5956528 | None:intergenic |
| TGTTCTGCAGAAAATGGTGG+TGG | 0.609323 | 1.4:-5954813 | MS.gene57225:CDS |
| TCATCTTTAGAAGCTTCAAG+AGG | 0.609813 | 1.4:+5956447 | None:intergenic |
| TTGGGAAACAATGCCACAGG+AGG | 0.609991 | 1.4:+5955038 | None:intergenic |
| AAATGCTTGATAGAAACAAG+TGG | 0.610551 | 1.4:-5951777 | MS.gene57225:CDS |
| TCGTCGGAAGCGGAACAAGA+AGG | 0.614373 | 1.4:+5956847 | None:intergenic |
| TTGGTTGTTACTTTAGAGGG+AGG | 0.615819 | 1.4:+5956775 | None:intergenic |
| CCATTGGGAAACAATGCCAC+AGG | 0.616536 | 1.4:+5955035 | None:intergenic |
| CATTATAAACTAACAACTCA+GGG | 0.617843 | 1.4:+5952813 | None:intergenic |
| ATACATGAAGTCCAGTGCTA+GGG | 0.620185 | 1.4:-5951832 | MS.gene57225:CDS |
| TTCTAAAGATGATCTTCTAG+TGG | 0.620264 | 1.4:-5956436 | MS.gene57225:intron |
| CCGTTTGATTCGTCTAAATG+GGG | 0.627608 | 1.4:-5956528 | MS.gene57225:CDS |
| TAGAAGGTGATCCATTAGGA+AGG | 0.638906 | 1.4:-5952775 | MS.gene57225:CDS |
| GTTGCGCATGAGAGTGTCGT+CGG | 0.640150 | 1.4:+5956831 | None:intergenic |
| CAAGAAGGAGGCGAAGACAT+CGG | 0.642374 | 1.4:+5956862 | None:intergenic |
| ACTTGCGAAGGAGAGAGGAT+GGG | 0.644649 | 1.4:-5954865 | MS.gene57225:CDS |
| ATTCTGGATATGTATAACCC+TGG | 0.648113 | 1.4:-5954478 | MS.gene57225:CDS |
| TAAGAATCGGAGTAGATAAG+CGG | 0.660736 | 1.4:+5956671 | None:intergenic |
| ACATATCCAGAATGTAGACT+CGG | 0.660904 | 1.4:+5954488 | None:intergenic |
| GGATGGGCCATTAATGTGGG+AGG | 0.673443 | 1.4:-5954849 | MS.gene57225:CDS |
| TGGGAAACAATGCCACAGGA+GGG | 0.674322 | 1.4:+5955039 | None:intergenic |
| TCGGAAGCGGAACAAGAAGG+AGG | 0.682976 | 1.4:+5956850 | None:intergenic |
| CACTGTTCTGCAGAAAATGG+TGG | 0.684154 | 1.4:-5954816 | MS.gene57225:CDS |
| ATTGGCTGCGAAACTTGCGA+AGG | 0.694927 | 1.4:-5954877 | MS.gene57225:CDS |
| TCAACTGAACAAAAGCAAAG+CGG | 0.698918 | 1.4:+5954757 | None:intergenic |
| ATAAATATAGGTCCCTCCTG+TGG | 0.699886 | 1.4:-5955051 | MS.gene57225:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAGGTTTTTATTTAAAAAA+AGG | + | chr1.4:5954847-5954866 | None:intergenic | 10.0% |
| !!! | TTTTTGTTTATTTTTGTTTT+AGG | - | chr1.4:5952063-5952082 | MS.gene57225:intron | 10.0% |
| !! | ACTTAATATAGTTGAATAAT+TGG | + | chr1.4:5955516-5955535 | None:intergenic | 15.0% |
| !! | ATATTGGAAAAATGTTTATA+AGG | + | chr1.4:5953012-5953031 | None:intergenic | 15.0% |
| !! | ATGAATAAAAAAACTAAGTA+AGG | + | chr1.4:5955748-5955767 | None:intergenic | 15.0% |
| !! | TATTGGAAAAATGTTTATAA+GGG | + | chr1.4:5953011-5953030 | None:intergenic | 15.0% |
| !! | TCATATAAAACAATTTAACA+TGG | + | chr1.4:5953045-5953064 | None:intergenic | 15.0% |
| !! | TGACATAAAGTAATAAATAT+AGG | - | chr1.4:5953524-5953543 | MS.gene57225:intron | 15.0% |
| !! | TTAAGATAATAAATTGAAGA+TGG | + | chr1.4:5955147-5955166 | None:intergenic | 15.0% |
| !! | TTATATTAAAAGTAACAATC+AGG | - | chr1.4:5955721-5955740 | MS.gene57225:intron | 15.0% |
| !! | TTTATATATCTCTGTTTATT+GGG | - | chr1.4:5954755-5954774 | MS.gene57225:CDS | 15.0% |
| !!! | AAAATAAAAAGTATTTATCC+TGG | - | chr1.4:5956242-5956261 | MS.gene57225:intron | 15.0% |
| !!! | AAACTTTTATTAAATCGATT+TGG | - | chr1.4:5955911-5955930 | MS.gene57225:intron | 15.0% |
| !!! | AAATTATTTGCTTTTAGTTT+AGG | - | chr1.4:5955099-5955118 | MS.gene57225:intron | 15.0% |
| !!! | AATTTTTCATTTCTTGTTTA+AGG | - | chr1.4:5956759-5956778 | MS.gene57225:intron | 15.0% |
| !!! | ACTTTTAAGTAAAAAACAAA+TGG | + | chr1.4:5956539-5956558 | None:intergenic | 15.0% |
| !!! | TACTTTTTATTTTATTTTCC+AGG | + | chr1.4:5956235-5956254 | None:intergenic | 15.0% |
| !!! | TATTTTTTTAATTCTACTTG+TGG | - | chr1.4:5954416-5954435 | MS.gene57225:intron | 15.0% |
| !!! | TTCATAATAATTTTTCTCTA+AGG | - | chr1.4:5956399-5956418 | MS.gene57225:intron | 15.0% |
| !!! | TTTATTGATAATGTTATCTT+AGG | - | chr1.4:5956567-5956586 | MS.gene57225:intron | 15.0% |
| !!! | TTTTACAAGTTAAATTCTTA+AGG | + | chr1.4:5952943-5952962 | None:intergenic | 15.0% |
| !!! | TTTTTCAATTAAGATTACAA+AGG | - | chr1.4:5952535-5952554 | MS.gene57225:CDS | 15.0% |
| !! | AAAAAAGTAGAAGTTAGTTA+TGG | + | chr1.4:5951870-5951889 | None:intergenic | 20.0% |
| !! | AAACATTATCTTCACTTAAA+AGG | - | chr1.4:5954509-5954528 | MS.gene57225:intron | 20.0% |
| !! | AAATGATATGTCATAAGAAT+CGG | + | chr1.4:5951962-5951981 | None:intergenic | 20.0% |
| !! | AAATGCAGTATAAAATATCT+AGG | + | chr1.4:5954193-5954212 | None:intergenic | 20.0% |
| !! | AATAAATGAACTTCACAAAA+CGG | - | chr1.4:5952620-5952639 | MS.gene57225:intron | 20.0% |
| !! | AATATAGTTGAATAATTGGA+TGG | + | chr1.4:5955512-5955531 | None:intergenic | 20.0% |
| !! | AGAATTGAAAGAAACTTATA+TGG | - | chr1.4:5953400-5953419 | MS.gene57225:CDS | 20.0% |
| !! | ATATAGTTGAATAATTGGAT+GGG | + | chr1.4:5955511-5955530 | None:intergenic | 20.0% |
| !! | ATTTATTACTTTATGTCAGT+AGG | + | chr1.4:5953522-5953541 | None:intergenic | 20.0% |
| !! | CTTTATATATCTCTGTTTAT+TGG | - | chr1.4:5954754-5954773 | MS.gene57225:CDS | 20.0% |
| !! | GAATTTGAATACTGAAAAAA+TGG | - | chr1.4:5954869-5954888 | MS.gene57225:CDS | 20.0% |
| !! | TAATAATCAATTAAGCACTT+TGG | - | chr1.4:5952000-5952019 | MS.gene57225:intron | 20.0% |
| !! | TTCAGTATTCAAATTCAAAT+AGG | + | chr1.4:5954865-5954884 | None:intergenic | 20.0% |
| !! | TTTAATATAACTTCTTCAAC+TGG | + | chr1.4:5955711-5955730 | None:intergenic | 20.0% |
| !! | TTTATCATCTAGACTTTAAT+TGG | - | chr1.4:5952240-5952259 | MS.gene57225:intron | 20.0% |
| !! | TTTATTACTTTATGTCAGTA+GGG | + | chr1.4:5953521-5953540 | None:intergenic | 20.0% |
| !!! | AAAGAGTTGATCATATTATT+GGG | + | chr1.4:5954815-5954834 | None:intergenic | 20.0% |
| !!! | AGTTTCTTTAAGAAAGTAAT+AGG | - | chr1.4:5955957-5955976 | MS.gene57225:intron | 20.0% |
| !!! | ATTTTAACATTCGAGTTAAA+TGG | - | chr1.4:5956371-5956390 | MS.gene57225:intron | 20.0% |
| !!! | GAAACACATTTTCATATTAT+GGG | + | chr1.4:5955067-5955086 | None:intergenic | 20.0% |
| !!! | GTCATATTTTTTTACTATCA+TGG | + | chr1.4:5956294-5956313 | None:intergenic | 20.0% |
| !!! | TGAAACACATTTTCATATTA+TGG | + | chr1.4:5955068-5955087 | None:intergenic | 20.0% |
| !!! | TGTAAGTTTCTTAATTCTTT+TGG | - | chr1.4:5952119-5952138 | MS.gene57225:intron | 20.0% |
| !!! | TTATACTGCATTTTATTATG+AGG | - | chr1.4:5954200-5954219 | MS.gene57225:intron | 20.0% |
| !!! | TTATTTTCCAGGATAAAAAT+GGG | + | chr1.4:5956224-5956243 | None:intergenic | 20.0% |
| !!! | TTTATTTTCCAGGATAAAAA+TGG | + | chr1.4:5956225-5956244 | None:intergenic | 20.0% |
| ! | AAAAACAACAGAAATACGAA+GGG | + | chr1.4:5955630-5955649 | None:intergenic | 25.0% |
| ! | AAAAATCCTAAGAGATATGA+AGG | + | chr1.4:5954081-5954100 | None:intergenic | 25.0% |
| ! | AAATCAGAAAGTTGAAGTAA+AGG | - | chr1.4:5955229-5955248 | MS.gene57225:intron | 25.0% |
| ! | AAATTGTCTGTATAATCTTC+AGG | - | chr1.4:5953957-5953976 | MS.gene57225:intron | 25.0% |
| ! | AATATTCAATGGGTATGTTT+GGG | + | chr1.4:5955675-5955694 | None:intergenic | 25.0% |
| ! | AATTGTCTGTATAATCTTCA+GGG | - | chr1.4:5953958-5953977 | MS.gene57225:intron | 25.0% |
| ! | AATTTCAACAGTCAAAATGA+GGG | - | chr1.4:5955574-5955593 | MS.gene57225:intron | 25.0% |
| ! | ACATGGTGTATATATCATAT+TGG | + | chr1.4:5953028-5953047 | None:intergenic | 25.0% |
| ! | ACTTGATTAACATCTCAAAT+AGG | + | chr1.4:5956733-5956752 | None:intergenic | 25.0% |
| ! | AGTCTTCAAATAAAAATTGC+CGG | - | chr1.4:5953907-5953926 | MS.gene57225:intron | 25.0% |
| ! | ATAAATGAACTTCACAAAAC+GGG | - | chr1.4:5952621-5952640 | MS.gene57225:intron | 25.0% |
| ! | ATAAGATTCAATTCACGTTT+AGG | - | chr1.4:5956597-5956616 | MS.gene57225:intron | 25.0% |
| ! | ATAATCCTAATATAGAACAC+AGG | + | chr1.4:5955192-5955211 | None:intergenic | 25.0% |
| ! | ATAATGACAAAGCAATTAGA+AGG | + | chr1.4:5955027-5955046 | None:intergenic | 25.0% |
| ! | ATATGAGCCTATATACTATA+GGG | + | chr1.4:5952713-5952732 | None:intergenic | 25.0% |
| ! | ATGACTAAAATTGACAAGAT+TGG | - | chr1.4:5952731-5952750 | MS.gene57225:intron | 25.0% |
| ! | CATTATAAACTAACAACTCA+GGG | + | chr1.4:5955807-5955826 | None:intergenic | 25.0% |
| ! | GTCACATTTGATACATTATA+TGG | + | chr1.4:5956316-5956335 | None:intergenic | 25.0% |
| ! | GTGCTAGAAAATTGAAAATT+TGG | - | chr1.4:5954675-5954694 | MS.gene57225:intron | 25.0% |
| ! | GTTATAAAAATTTATCGTGC+TGG | - | chr1.4:5953374-5953393 | MS.gene57225:intron | 25.0% |
| ! | TAATGTATCAAATGTGACTA+AGG | - | chr1.4:5956318-5956337 | MS.gene57225:intron | 25.0% |
| ! | TAATTTCAACAGTCAAAATG+AGG | - | chr1.4:5955573-5955592 | MS.gene57225:intron | 25.0% |
| ! | TCTTATGACATATCATTTCT+CGG | - | chr1.4:5951964-5951983 | MS.gene57225:intron | 25.0% |
| ! | TGATCTTACTCTTATACTAA+TGG | - | chr1.4:5953692-5953711 | MS.gene57225:intron | 25.0% |
| ! | TGTTAATAGAATAAGCTAAC+CGG | + | chr1.4:5953929-5953948 | None:intergenic | 25.0% |
| ! | TGTTCTATATTAGGATTATG+AGG | - | chr1.4:5955193-5955212 | MS.gene57225:intron | 25.0% |
| ! | TTCACTATAAGCTCAAAAAT+TGG | + | chr1.4:5952375-5952394 | None:intergenic | 25.0% |
| ! | TTGGTTGAATTTATAGTGTT+TGG | + | chr1.4:5952870-5952889 | None:intergenic | 25.0% |
| ! | TTGTTCAGTTGAATATATCA+AGG | - | chr1.4:5953871-5953890 | MS.gene57225:intron | 25.0% |
| ! | TTTGACTGTTGAAATTAAGA+TGG | + | chr1.4:5955570-5955589 | None:intergenic | 25.0% |
| !! | ATCAATGTCCTTTTTCTATT+AGG | - | chr1.4:5954622-5954641 | MS.gene57225:CDS | 25.0% |
| !! | CAAAGAGTTGATCATATTAT+TGG | + | chr1.4:5954816-5954835 | None:intergenic | 25.0% |
| !! | TATTTTCCAGGATAAAAATG+GGG | + | chr1.4:5956223-5956242 | None:intergenic | 25.0% |
| !! | TTAGAGATGAGAAAGTTTTT+CGG | - | chr1.4:5956084-5956103 | MS.gene57225:intron | 25.0% |
| !! | TTTTTCCCTTTTCAATCTAA+AGG | - | chr1.4:5953168-5953187 | MS.gene57225:intron | 25.0% |
| !!! | AGCAATTCTAGAATATTCAA+TGG | + | chr1.4:5955686-5955705 | None:intergenic | 25.0% |
| !!! | ATTTGTTTCCATTGTTTTTC+TGG | - | chr1.4:5953445-5953464 | MS.gene57225:intron | 25.0% |
| !!! | CAAATGATTTGCTAAAACAA+TGG | - | chr1.4:5954972-5954991 | MS.gene57225:intron | 25.0% |
| !!! | GCAATTCTAGAATATTCAAT+GGG | + | chr1.4:5955685-5955704 | None:intergenic | 25.0% |
| !!! | TCTTAATTCTTTTGGTGTTT+TGG | - | chr1.4:5952127-5952146 | MS.gene57225:intron | 25.0% |
| !!! | TGCATATACCTTTGTTTTTA+AGG | - | chr1.4:5954784-5954803 | MS.gene57225:CDS | 25.0% |
| !!! | TTTTATTAAATCGATTTGGC+TGG | - | chr1.4:5955915-5955934 | MS.gene57225:intron | 25.0% |
| !!! | TTTTCATTTCTTGTTTAAGG+TGG | - | chr1.4:5956762-5956781 | MS.gene57225:intron | 25.0% |
| AAAACAACAGAAATACGAAG+GGG | + | chr1.4:5955629-5955648 | None:intergenic | 30.0% | |
| AAATGCTTGATAGAAACAAG+TGG | - | chr1.4:5956840-5956859 | MS.gene57225:CDS | 30.0% | |
| AAGTAGCTAATAACTGATAG+CGG | + | chr1.4:5952902-5952921 | None:intergenic | 30.0% | |
| ACAAGAGAGAGAAATTCTAT+TGG | + | chr1.4:5954053-5954072 | None:intergenic | 30.0% | |
| ACAGACTTCAAGTAAAAAGT+TGG | + | chr1.4:5953654-5953673 | None:intergenic | 30.0% | |
| AGATATACTCAAAACACTTC+TGG | - | chr1.4:5956346-5956365 | MS.gene57225:intron | 30.0% | |
| AGCTTCACGGAAAAAAAAAA+AGG | + | chr1.4:5953328-5953347 | None:intergenic | 30.0% | |
| AGTGAATAGCTTATAGCTTA+TGG | - | chr1.4:5952389-5952408 | MS.gene57225:intron | 30.0% | |
| AGTGTACCTTTAGATTGAAA+AGG | + | chr1.4:5953177-5953196 | None:intergenic | 30.0% | |
| ATATCCATTATCAGAGAATG+TGG | + | chr1.4:5956435-5956454 | None:intergenic | 30.0% | |
| ATCATACTTGAATAGTCTGA+AGG | - | chr1.4:5953201-5953220 | MS.gene57225:intron | 30.0% | |
| ATTTATCTGAGAGCTTACTT+TGG | - | chr1.4:5954730-5954749 | MS.gene57225:intron | 30.0% | |
| ATTTCCATTTAAGAGCTTCA+CGG | + | chr1.4:5953341-5953360 | None:intergenic | 30.0% | |
| ATTTCCTTTGGTAAAAACAG+TGG | - | chr1.4:5952474-5952493 | MS.gene57225:intron | 30.0% | |
| CATATGAGCCTATATACTAT+AGG | + | chr1.4:5952714-5952733 | None:intergenic | 30.0% | |
| CTAATCCACCTAATAGAAAA+AGG | + | chr1.4:5954633-5954652 | None:intergenic | 30.0% | |
| CTCTTATACTAATGGCATTA+TGG | - | chr1.4:5953700-5953719 | MS.gene57225:intron | 30.0% | |
| GAAAAACAACAGAAATACGA+AGG | + | chr1.4:5955631-5955650 | None:intergenic | 30.0% | |
| GAATATTCAATGGGTATGTT+TGG | + | chr1.4:5955676-5955695 | None:intergenic | 30.0% | |
| GCATTATAAACTAACAACTC+AGG | + | chr1.4:5955808-5955827 | None:intergenic | 30.0% | |
| GTAGAAGTTAGTTATGGAAT+TGG | + | chr1.4:5951864-5951883 | None:intergenic | 30.0% | |
| GTGTACCTTTAGATTGAAAA+GGG | + | chr1.4:5953176-5953195 | None:intergenic | 30.0% | |
| GTTGAAGGTAATGTAATTCT+TGG | - | chr1.4:5955864-5955883 | MS.gene57225:intron | 30.0% | |
| TAATTAAACGCTATCAGAGA+GGG | + | chr1.4:5952335-5952354 | None:intergenic | 30.0% | |
| TCAATTCACGTTTAGGAAAA+TGG | - | chr1.4:5956604-5956623 | MS.gene57225:intron | 30.0% | |
| TCACGGAAAAAAAAAAAGGA+AGG | + | chr1.4:5953324-5953343 | None:intergenic | 30.0% | |
| TTACCAAAGGATATATTCCA+GGG | + | chr1.4:5954159-5954178 | None:intergenic | 30.0% | |
| TTCTGTTACCAGAAAAACAA+TGG | + | chr1.4:5953456-5953475 | None:intergenic | 30.0% | |
| TTCTTCCTGTGTTCTATATT+AGG | - | chr1.4:5955184-5955203 | MS.gene57225:intron | 30.0% | |
| TTGAAGAAAGTTCGCTAAAA+AGG | + | chr1.4:5956698-5956717 | None:intergenic | 30.0% | |
| TTTACCAAAGGATATATTCC+AGG | + | chr1.4:5954160-5954179 | None:intergenic | 30.0% | |
| ! | AATGTCCTTTTTCTATTAGG+TGG | - | chr1.4:5954625-5954644 | MS.gene57225:CDS | 30.0% |
| ! | CAAGATAATTGAGGTACTTT+CGG | - | chr1.4:5953240-5953259 | MS.gene57225:intron | 30.0% |
| ! | GAGTTGTTAGTTTATAATGC+TGG | - | chr1.4:5955808-5955827 | MS.gene57225:intron | 30.0% |
| ! | TACTGCATTTTATTATGAGG+CGG | - | chr1.4:5954203-5954222 | MS.gene57225:intron | 30.0% |
| ! | TCAAACTGATGCATTTTAAG+CGG | - | chr1.4:5953120-5953139 | MS.gene57225:intron | 30.0% |
| ! | TCACTCTCTTTTCTTTCATT+TGG | - | chr1.4:5952212-5952231 | MS.gene57225:intron | 30.0% |
| ! | TCTTGATTTGATAACCATGA+CGG | - | chr1.4:5956649-5956668 | MS.gene57225:CDS | 30.0% |
| ! | TTATACAGACAATTTTGCAC+AGG | + | chr1.4:5953952-5953971 | None:intergenic | 30.0% |
| ! | TTCTAAAGATGATCTTCTAG+TGG | - | chr1.4:5952181-5952200 | MS.gene57225:intron | 30.0% |
| ! | TTTTACTTTGTTCGTCATTC+AGG | - | chr1.4:5951921-5951940 | MS.gene57225:intron | 30.0% |
| ! | TTTTCCACATTCTCTGATAA+TGG | - | chr1.4:5956428-5956447 | MS.gene57225:intron | 30.0% |
| !! | CTAAAACAATGGACTGAAAT+TGG | - | chr1.4:5954983-5955002 | MS.gene57225:intron | 30.0% |
| !! | GAATTGGTTGTTACTTTAGA+GGG | + | chr1.4:5951848-5951867 | None:intergenic | 30.0% |
| !! | TATTAGGTGGATTAGTTATG+TGG | - | chr1.4:5954638-5954657 | MS.gene57225:CDS | 30.0% |
| !! | TTTGCTTATAGCTTTGAGTT+TGG | - | chr1.4:5954537-5954556 | MS.gene57225:intron | 30.0% |
| !!! | CTGTTTTTACCAAAGGAAAT+TGG | + | chr1.4:5952474-5952493 | None:intergenic | 30.0% |
| !!! | CTTAGGATTTTTTCACTGAT+AGG | - | chr1.4:5954089-5954108 | MS.gene57225:intron | 30.0% |
| !!! | TGTTTTAGCAAATCATTTGC+TGG | + | chr1.4:5954971-5954990 | None:intergenic | 30.0% |
| AAACCGACCCTATAGTATAT+AGG | - | chr1.4:5952703-5952722 | MS.gene57225:intron | 35.0% | |
| ACATAGTCCTAGTAATGTAG+TGG | + | chr1.4:5955451-5955470 | None:intergenic | 35.0% | |
| ACATATCCAGAATGTAGACT+CGG | + | chr1.4:5954132-5954151 | None:intergenic | 35.0% | |
| AGAGGATACAATGATCTAGA+TGG | + | chr1.4:5954324-5954343 | None:intergenic | 35.0% | |
| ATTACCCTGAATACACATCA+TGG | + | chr1.4:5956187-5956206 | None:intergenic | 35.0% | |
| ATTACCTTCAACCTTCCTAA+TGG | + | chr1.4:5955856-5955875 | None:intergenic | 35.0% | |
| ATTCATGCTGATGTGTTTCA+AGG | - | chr1.4:5955762-5955781 | MS.gene57225:intron | 35.0% | |
| ATTCTGGATATGTATAACCC+TGG | - | chr1.4:5954139-5954158 | MS.gene57225:intron | 35.0% | |
| ATTGATCTTGATGCACATCA+AGG | - | chr1.4:5953989-5954008 | MS.gene57225:intron | 35.0% | |
| CAAATGCCAAGAAAGAGAAA+TGG | + | chr1.4:5954237-5954256 | None:intergenic | 35.0% | |
| CAAGCAATACTTATGATGTG+TGG | + | chr1.4:5956019-5956038 | None:intergenic | 35.0% | |
| CAATGTTGCCAAGATAATTG+AGG | - | chr1.4:5953231-5953250 | MS.gene57225:intron | 35.0% | |
| CATAGTCCTAGTAATGTAGT+GGG | + | chr1.4:5955450-5955469 | None:intergenic | 35.0% | |
| CATTTCTCTTTCTTGGCATT+TGG | - | chr1.4:5954235-5954254 | MS.gene57225:intron | 35.0% | |
| CATTTGCAAGTTAATTGCAG+AGG | + | chr1.4:5954934-5954953 | None:intergenic | 35.0% | |
| CTAATTAAACGCTATCAGAG+AGG | + | chr1.4:5952336-5952355 | None:intergenic | 35.0% | |
| CTCAATTATCTTGGCAACAT+TGG | + | chr1.4:5953233-5953252 | None:intergenic | 35.0% | |
| CTTATAGCTCATAAGCTCAT+AGG | + | chr1.4:5952664-5952683 | None:intergenic | 35.0% | |
| GAATTGTGAATAATCGCGTT+TGG | - | chr1.4:5952022-5952041 | MS.gene57225:intron | 35.0% | |
| GATTTACCTGTTTCCTGAAT+GGG | + | chr1.4:5953632-5953651 | None:intergenic | 35.0% | |
| GTAACAGAATGACATTTGCT+GGG | - | chr1.4:5953467-5953486 | MS.gene57225:intron | 35.0% | |
| GTTTCTCCATTTCTCTTTCT+TGG | - | chr1.4:5954228-5954247 | MS.gene57225:intron | 35.0% | |
| TAAATTGAAGATGGCCATTC+CGG | + | chr1.4:5955138-5955157 | None:intergenic | 35.0% | |
| TAACCCTGGAATATATCCTT+TGG | - | chr1.4:5954153-5954172 | MS.gene57225:intron | 35.0% | |
| TAAGAATCGGAGTAGATAAG+CGG | + | chr1.4:5951949-5951968 | None:intergenic | 35.0% | |
| TATACTAATGGCATTATGGC+AGG | - | chr1.4:5953704-5953723 | MS.gene57225:intron | 35.0% | |
| TATATACTATAGGGTCGGTT+TGG | + | chr1.4:5952704-5952723 | None:intergenic | 35.0% | |
| TCAACTGAACAAAAGCAAAG+CGG | + | chr1.4:5953863-5953882 | None:intergenic | 35.0% | |
| TCAAGGAAATGGTCATGAAA+TGG | - | chr1.4:5954006-5954025 | MS.gene57225:intron | 35.0% | |
| TCTATTGGCCATACTATCAT+CGG | + | chr1.4:5954038-5954057 | None:intergenic | 35.0% | |
| TGATTACCCACTACATTACT+AGG | - | chr1.4:5955441-5955460 | MS.gene57225:intron | 35.0% | |
| TGTTTGCCTTCATATCTCTT+AGG | - | chr1.4:5954072-5954091 | MS.gene57225:intron | 35.0% | |
| TTTCATGCCATGATCACAAT+GGG | + | chr1.4:5954384-5954403 | None:intergenic | 35.0% | |
| ! | ACTGCATTTTATTATGAGGC+GGG | - | chr1.4:5954204-5954223 | MS.gene57225:intron | 35.0% |
| ! | ATCCGTTTGATTCGTCTAAA+TGG | - | chr1.4:5952087-5952106 | MS.gene57225:intron | 35.0% |
| ! | ATCTCTAAGAGCAATTCCAT+CGG | + | chr1.4:5956072-5956091 | None:intergenic | 35.0% |
| ! | CCACCATGAAAAGCATAAAT+GGG | + | chr1.4:5953084-5953103 | None:intergenic | 35.0% |
| ! | CTACCCATTTATGCTTTTCA+TGG | - | chr1.4:5953078-5953097 | MS.gene57225:intron | 35.0% |
| ! | CTTGATTTGATAACCATGAC+GGG | - | chr1.4:5956650-5956669 | MS.gene57225:CDS | 35.0% |
| ! | GAAATTAGATGAAGCATTCG+AGG | - | chr1.4:5955376-5955395 | MS.gene57225:intron | 35.0% |
| ! | GTAAAGTTCTTTTCCCATTC+AGG | - | chr1.4:5953616-5953635 | MS.gene57225:intron | 35.0% |
| ! | TAACAGAATGACATTTGCTG+GGG | - | chr1.4:5953468-5953487 | MS.gene57225:intron | 35.0% |
| ! | TATTAGTTTAGAACCCGTCA+TGG | + | chr1.4:5956666-5956685 | None:intergenic | 35.0% |
| ! | TCATCTTTAGAAGCTTCAAG+AGG | + | chr1.4:5952173-5952192 | None:intergenic | 35.0% |
| ! | TCCACCATGAAAAGCATAAA+TGG | + | chr1.4:5953085-5953104 | None:intergenic | 35.0% |
| ! | TCCGTTTGATTCGTCTAAAT+GGG | - | chr1.4:5952088-5952107 | MS.gene57225:intron | 35.0% |
| ! | TTTTCATGCCATGATCACAA+TGG | + | chr1.4:5954385-5954404 | None:intergenic | 35.0% |
| ! | TTTTCCGTGAAGCTCTTAAA+TGG | - | chr1.4:5953334-5953353 | MS.gene57225:intron | 35.0% |
| !! | AGAAACTTATATGGTGTTGC+TGG | - | chr1.4:5953409-5953428 | MS.gene57225:CDS | 35.0% |
| !! | CGAAAGTACCTCAATTATCT+TGG | + | chr1.4:5953242-5953261 | None:intergenic | 35.0% |
| !! | GGAATTGGTTGTTACTTTAG+AGG | + | chr1.4:5951849-5951868 | None:intergenic | 35.0% |
| !! | GGGATTAGCCTTAAAAACAA+AGG | + | chr1.4:5954795-5954814 | None:intergenic | 35.0% |
| !! | TTTAGGATGTGCATGTTTTC+CGG | - | chr1.4:5955116-5955135 | MS.gene57225:intron | 35.0% |
| !!! | AGCTACTTTTTACCAATCAG+AGG | - | chr1.4:5952914-5952933 | MS.gene57225:intron | 35.0% |
| !!! | CTATCCACTGTTTTTACCAA+AGG | + | chr1.4:5952481-5952500 | None:intergenic | 35.0% |
| !!! | GCTACTTTTTACCAATCAGA+GGG | - | chr1.4:5952915-5952934 | MS.gene57225:intron | 35.0% |
| AAAACCTCCTCCCACATTAA+TGG | + | chr1.4:5953778-5953797 | None:intergenic | 40.0% | |
| AAATTGGCATTGCCAAACAG+AGG | + | chr1.4:5952359-5952378 | None:intergenic | 40.0% | |
| AGAGTTTGGTAGAGAGGATA+CGG | + | chr1.4:5951811-5951830 | None:intergenic | 40.0% | |
| ATAAATATAGGTCCCTCCTG+TGG | - | chr1.4:5953566-5953585 | MS.gene57225:intron | 40.0% | |
| ATACATGAAGTCCAGTGCTA+GGG | - | chr1.4:5956785-5956804 | MS.gene57225:intron | 40.0% | |
| ATCCTAGAAGGTGATCCATT+AGG | - | chr1.4:5955838-5955857 | MS.gene57225:intron | 40.0% | |
| ATGATCACAATGGGATTCAC+AGG | + | chr1.4:5954375-5954394 | None:intergenic | 40.0% | |
| CACTGATAGGACCTTTGTAA+TGG | - | chr1.4:5954102-5954121 | MS.gene57225:intron | 40.0% | |
| CATCACTGTTCTGCAGAAAA+TGG | - | chr1.4:5953798-5953817 | MS.gene57225:intron | 40.0% | |
| CATCATTCACATCAAGACAG+AGG | + | chr1.4:5954342-5954361 | None:intergenic | 40.0% | |
| CCCCATTTAGACGAATCAAA+CGG | + | chr1.4:5952092-5952111 | None:intergenic | 40.0% | |
| CTCTGTCTTGATGTGAATGA+TGG | - | chr1.4:5954340-5954359 | MS.gene57225:intron | 40.0% | |
| CTTGATGCACATCAAGGAAA+TGG | - | chr1.4:5953995-5954014 | MS.gene57225:intron | 40.0% | |
| GAGCCTATATACTATAGGGT+CGG | + | chr1.4:5952709-5952728 | None:intergenic | 40.0% | |
| GGATTTACCTGTTTCCTGAA+TGG | + | chr1.4:5953633-5953652 | None:intergenic | 40.0% | |
| GGTAACAGAATGACATTTGC+TGG | - | chr1.4:5953466-5953485 | MS.gene57225:intron | 40.0% | |
| TAGAAGGTGATCCATTAGGA+AGG | - | chr1.4:5955842-5955861 | MS.gene57225:intron | 40.0% | |
| TAGCTTATAGCTTATGGCTC+TGG | - | chr1.4:5952395-5952414 | MS.gene57225:intron | 40.0% | |
| TAGCTTATTGAGCCTCTGTT+TGG | - | chr1.4:5952443-5952462 | MS.gene57225:intron | 40.0% | |
| TCCTTCTCCTTACCATAGAT+GGG | - | chr1.4:5956161-5956180 | MS.gene57225:intron | 40.0% | |
| TGATCACAATGGGATTCACA+GGG | + | chr1.4:5954374-5954393 | None:intergenic | 40.0% | |
| TGATCCATTAGGAAGGTTGA+AGG | - | chr1.4:5955849-5955868 | MS.gene57225:intron | 40.0% | |
| TGATGTGTTTCAAGGTTGCT+GGG | - | chr1.4:5955770-5955789 | MS.gene57225:intron | 40.0% | |
| TGTGAATCCCATTGTGATCA+TGG | - | chr1.4:5954374-5954393 | MS.gene57225:intron | 40.0% | |
| TTACGTTGCACAAGACCATT+GGG | + | chr1.4:5953600-5953619 | None:intergenic | 40.0% | |
| TTCACCTTGAACTTTCAGAG+CGG | - | chr1.4:5955329-5955348 | MS.gene57225:intron | 40.0% | |
| TTTACGTTGCACAAGACCAT+TGG | + | chr1.4:5953601-5953620 | None:intergenic | 40.0% | |
| ! | CCCATTTATGCTTTTCATGG+TGG | - | chr1.4:5953081-5953100 | MS.gene57225:intron | 40.0% |
| ! | CCGTTTGATTCGTCTAAATG+GGG | - | chr1.4:5952089-5952108 | MS.gene57225:intron | 40.0% |
| ! | GCGTTTAATTAGCCTCTGTT+TGG | - | chr1.4:5952344-5952363 | MS.gene57225:intron | 40.0% |
| ! | TCTCTAAGAGCAATTCCATC+GGG | + | chr1.4:5956071-5956090 | None:intergenic | 40.0% |
| ! | TCTTTTCCCATTCAGGAAAC+AGG | - | chr1.4:5953623-5953642 | MS.gene57225:intron | 40.0% |
| ! | TTCCTAATGGATCACCTTCT+AGG | + | chr1.4:5955843-5955862 | None:intergenic | 40.0% |
| !! | ATGGTGTTGCTGGAATTCTT+TGG | - | chr1.4:5953419-5953438 | MS.gene57225:intron | 40.0% |
| !! | CAAAAGCCCCATTTTTATCC+TGG | - | chr1.4:5956214-5956233 | MS.gene57225:intron | 40.0% |
| !! | CTGATAGCGGATGAACTAAT+TGG | + | chr1.4:5952889-5952908 | None:intergenic | 40.0% |
| !! | TTGGTTGTTACTTTAGAGGG+AGG | + | chr1.4:5951845-5951864 | None:intergenic | 40.0% |
| AACTTGCAAATGAAGTGCGC+AGG | - | chr1.4:5954942-5954961 | MS.gene57225:intron | 45.0% | |
| AATGGGTATGTTTGGGAGTC+AGG | + | chr1.4:5955668-5955687 | None:intergenic | 45.0% | |
| ACAGAAATACGAAGGGGACA+AGG | + | chr1.4:5955623-5955642 | None:intergenic | 45.0% | |
| AGAGGATGGGCCATTAATGT+GGG | - | chr1.4:5953765-5953784 | MS.gene57225:intron | 45.0% | |
| AGGTACGTCGAAGTAGAGTT+TGG | + | chr1.4:5951825-5951844 | None:intergenic | 45.0% | |
| AGTGTGAGCCATAGTACATC+TGG | - | chr1.4:5954443-5954462 | MS.gene57225:intron | 45.0% | |
| ATCATGGCCCATCTATGGTA+AGG | + | chr1.4:5956171-5956190 | None:intergenic | 45.0% | |
| ATGGGCCATGATGTGTATTC+AGG | - | chr1.4:5956179-5956198 | MS.gene57225:intron | 45.0% | |
| CAACAGTCAAAATGAGGGAG+AGG | - | chr1.4:5955579-5955598 | MS.gene57225:intron | 45.0% | |
| CACTGTTCTGCAGAAAATGG+TGG | - | chr1.4:5953801-5953820 | MS.gene57225:intron | 45.0% | |
| CCTATTGTCATGCTCACTTC+AGG | - | chr1.4:5956128-5956147 | MS.gene57225:intron | 45.0% | |
| CCTGAAGTGAGCATGACAAT+AGG | + | chr1.4:5956131-5956150 | None:intergenic | 45.0% | |
| CGAAGTAGAGTTTGGTAGAG+AGG | + | chr1.4:5951817-5951836 | None:intergenic | 45.0% | |
| CTAATGGCATTATGGCAGGT+TGG | - | chr1.4:5953708-5953727 | MS.gene57225:intron | 45.0% | |
| CTCCTTCTCCTTACCATAGA+TGG | - | chr1.4:5956160-5956179 | MS.gene57225:intron | 45.0% | |
| CTGATGTGTTTCAAGGTTGC+TGG | - | chr1.4:5955769-5955788 | MS.gene57225:intron | 45.0% | |
| GAGAGGGCTCATGACATTAT+TGG | + | chr1.4:5952319-5952338 | None:intergenic | 45.0% | |
| GATACATGAAGTCCAGTGCT+AGG | - | chr1.4:5956784-5956803 | MS.gene57225:intron | 45.0% | |
| GGACTTTGCCGATGATAGTA+TGG | - | chr1.4:5954027-5954046 | MS.gene57225:intron | 45.0% | |
| GGAGCAAAGAGCTTTACCAA+AGG | + | chr1.4:5954172-5954191 | None:intergenic | 45.0% | |
| GTGTGAGCCATAGTACATCT+GGG | - | chr1.4:5954444-5954463 | MS.gene57225:intron | 45.0% | |
| TACACATCATGGCCCATCTA+TGG | + | chr1.4:5956176-5956195 | None:intergenic | 45.0% | |
| TAGATGGATGATTGAACCCC+AGG | + | chr1.4:5954308-5954327 | None:intergenic | 45.0% | |
| TATTGAGCCTCTGTTTGGCA+AGG | - | chr1.4:5952448-5952467 | MS.gene57225:intron | 45.0% | |
| TCACCTTGAACTTTCAGAGC+GGG | - | chr1.4:5955330-5955349 | MS.gene57225:intron | 45.0% | |
| TCGGCTTACATGTATGCATG+AGG | - | chr1.4:5953259-5953278 | MS.gene57225:CDS | 45.0% | |
| TGGGCCATGATGTGTATTCA+GGG | - | chr1.4:5956180-5956199 | MS.gene57225:intron | 45.0% | |
| TGTGAGCCATAGTACATCTG+GGG | - | chr1.4:5954445-5954464 | MS.gene57225:intron | 45.0% | |
| TGTTCTGCAGAAAATGGTGG+TGG | - | chr1.4:5953804-5953823 | MS.gene57225:intron | 45.0% | |
| TTCTTAAGGCTCCCTCTGAT+TGG | + | chr1.4:5952929-5952948 | None:intergenic | 45.0% | |
| TTGGCAAGGCCAATTTCCTT+TGG | - | chr1.4:5952462-5952481 | MS.gene57225:intron | 45.0% | |
| ! | GATGTGCATGTTTTCCGGAA+TGG | - | chr1.4:5955121-5955140 | MS.gene57225:intron | 45.0% |
| ! | GCAGGTTGGAGGAACTATAT+TGG | - | chr1.4:5953722-5953741 | MS.gene57225:intron | 45.0% |
| ! | GCTAGTCTATTCAACGTTGC+TGG | - | chr1.4:5954257-5954276 | MS.gene57225:intron | 45.0% |
| !! | AAATTGGCCTTGCCAAACAG+AGG | + | chr1.4:5952458-5952477 | None:intergenic | 45.0% |
| !! | TAAAAAAAAAAATATGATTT+AGG | + | chr1.4:5955278-5955297 | None:intergenic | 5.0% |
| AACTTGCGAAGGAGAGAGGA+TGG | - | chr1.4:5953751-5953770 | MS.gene57225:intron | 50.0% | |
| ACGAGGTTCCCACCATTGTT+GGG | + | chr1.4:5954573-5954592 | None:intergenic | 50.0% | |
| ACTCTAGACCCCAACAATGG+TGG | - | chr1.4:5954561-5954580 | MS.gene57225:intron | 50.0% | |
| ACTTGCGAAGGAGAGAGGAT+GGG | - | chr1.4:5953752-5953771 | MS.gene57225:intron | 50.0% | |
| ATTGGCTGCGAAACTTGCGA+AGG | - | chr1.4:5953740-5953759 | MS.gene57225:intron | 50.0% | |
| CATTGCTTTCTTGTGCGACG+TGG | - | chr1.4:5954468-5954487 | MS.gene57225:CDS | 50.0% | |
| CCATTGGGAAACAATGCCAC+AGG | + | chr1.4:5953585-5953604 | None:intergenic | 50.0% | |
| CCTGTGGCATTGTTTCCCAA+TGG | - | chr1.4:5953582-5953601 | MS.gene57225:intron | 50.0% | |
| CTCTAGACCCCAACAATGGT+GGG | - | chr1.4:5954562-5954581 | MS.gene57225:intron | 50.0% | |
| GAGAGGATGGGCCATTAATG+TGG | - | chr1.4:5953764-5953783 | MS.gene57225:intron | 50.0% | |
| GCAATGCCCCAGATGTACTA+TGG | + | chr1.4:5954454-5954473 | None:intergenic | 50.0% | |
| GCCCATCTATGGTAAGGAGA+AGG | + | chr1.4:5956165-5956184 | None:intergenic | 50.0% | |
| GCTGGAACTGACATCCTAGA+AGG | - | chr1.4:5955826-5955845 | MS.gene57225:intron | 50.0% | |
| TGGGAAACAATGCCACAGGA+GGG | + | chr1.4:5953581-5953600 | None:intergenic | 50.0% | |
| TTGGGAAACAATGCCACAGG+AGG | + | chr1.4:5953582-5953601 | None:intergenic | 50.0% | |
| TTTGGGAGTCAGGAGCTGAA+GGG | + | chr1.4:5955658-5955677 | None:intergenic | 50.0% | |
| ! | ATGGCATTATGGCAGGTTGG+AGG | - | chr1.4:5953711-5953730 | MS.gene57225:intron | 50.0% |
| ! | GACTCGGTCTGCCATTACAA+AGG | + | chr1.4:5954116-5954135 | None:intergenic | 50.0% |
| ! | TGACATGCTGCTTGTGTCCT+GGG | - | chr1.4:5954288-5954307 | MS.gene57225:intron | 50.0% |
| !! | AGTCCCGCTCTGAAAGTTCA+AGG | + | chr1.4:5955336-5955355 | None:intergenic | 50.0% |
| ATCTGCGATGACCCTAGCAC+TGG | + | chr1.4:5956799-5956818 | None:intergenic | 55.0% | |
| CACGAGGTTCCCACCATTGT+TGG | + | chr1.4:5954574-5954593 | None:intergenic | 55.0% | |
| CGAGGTTCCCACCATTGTTG+GGG | + | chr1.4:5954572-5954591 | None:intergenic | 55.0% | |
| GAGTCAGGAGCTGAAGGGAA+AGG | + | chr1.4:5955653-5955672 | None:intergenic | 55.0% | |
| GCGAAACTTGCGAAGGAGAG+AGG | - | chr1.4:5953747-5953766 | MS.gene57225:intron | 55.0% | |
| GGATGGGCCATTAATGTGGG+AGG | - | chr1.4:5953768-5953787 | MS.gene57225:intron | 55.0% | |
| GGCACTCTAGACCCCAACAA+TGG | - | chr1.4:5954558-5954577 | MS.gene57225:intron | 55.0% | |
| GGCAGACCGAGTCTACATTC+TGG | - | chr1.4:5954123-5954142 | MS.gene57225:intron | 55.0% | |
| GTTTCAAGGTTGCTGGGCGA+AGG | - | chr1.4:5955776-5955795 | MS.gene57225:intron | 55.0% | |
| GTTTGGGAGTCAGGAGCTGA+AGG | + | chr1.4:5955659-5955678 | None:intergenic | 55.0% | |
| TCGGAAGCGGAACAAGAAGG+AGG | + | chr1.4:5951770-5951789 | None:intergenic | 55.0% | |
| TCGTCGGAAGCGGAACAAGA+AGG | + | chr1.4:5951773-5951792 | None:intergenic | 55.0% | |
| TGCTTTCTTGTGCGACGTGG+TGG | - | chr1.4:5954471-5954490 | MS.gene57225:CDS | 55.0% | |
| TGGGCCATTAATGTGGGAGG+AGG | - | chr1.4:5953771-5953790 | MS.gene57225:intron | 55.0% | |
| ! | CTGACATGCTGCTTGTGTCC+TGG | - | chr1.4:5954287-5954306 | MS.gene57225:intron | 55.0% |
| ! | GACATGCTGCTTGTGTCCTG+GGG | - | chr1.4:5954289-5954308 | MS.gene57225:intron | 55.0% |
| !! | CATGAGAGTGTCGTCGGAAG+CGG | + | chr1.4:5951783-5951802 | None:intergenic | 55.0% |
| !! | GTTGCGCATGAGAGTGTCGT+CGG | + | chr1.4:5951789-5951808 | None:intergenic | 55.0% |
| AACGCAGCACCTAGAGCACG+AGG | + | chr1.4:5954590-5954609 | None:intergenic | 60.0% | |
| TGGTGGGAACCTCGTGCTCT+AGG | - | chr1.4:5954578-5954597 | MS.gene57225:intron | 60.0% | |
| ! | GTGCGACGTGGTGGTGAATC+TGG | - | chr1.4:5954480-5954499 | MS.gene57225:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 5951758 | 5956881 | 5951758 | ID=MS.gene57225 |
| chr1.4 | mRNA | 5951758 | 5956881 | 5951758 | ID=MS.gene57225.t1;Parent=MS.gene57225 |
| chr1.4 | exon | 5956786 | 5956881 | 5956786 | ID=MS.gene57225.t1.exon1;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5956786 | 5956881 | 5956786 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5956641 | 5956696 | 5956641 | ID=MS.gene57225.t1.exon2;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5956641 | 5956696 | 5956641 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5956437 | 5956554 | 5956437 | ID=MS.gene57225.t1.exon3;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5956437 | 5956554 | 5956437 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5955387 | 5955449 | 5955387 | ID=MS.gene57225.t1.exon4;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5955387 | 5955449 | 5955387 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5954995 | 5955063 | 5954995 | ID=MS.gene57225.t1.exon5;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5954995 | 5955063 | 5954995 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5954747 | 5954913 | 5954747 | ID=MS.gene57225.t1.exon6;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5954747 | 5954913 | 5954747 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5954596 | 5954660 | 5954596 | ID=MS.gene57225.t1.exon7;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5954596 | 5954660 | 5954596 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5954465 | 5954511 | 5954465 | ID=MS.gene57225.t1.exon8;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5954465 | 5954511 | 5954465 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5953389 | 5953433 | 5953389 | ID=MS.gene57225.t1.exon9;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5953389 | 5953433 | 5953389 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5953242 | 5953292 | 5953242 | ID=MS.gene57225.t1.exon10;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5953242 | 5953292 | 5953242 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5952769 | 5952855 | 5952769 | ID=MS.gene57225.t1.exon11;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5952769 | 5952855 | 5952769 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5952490 | 5952577 | 5952490 | ID=MS.gene57225.t1.exon12;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5952490 | 5952577 | 5952490 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| chr1.4 | exon | 5951758 | 5951858 | 5951758 | ID=MS.gene57225.t1.exon13;Parent=MS.gene57225.t1 |
| chr1.4 | CDS | 5951758 | 5951858 | 5951758 | ID=cds.MS.gene57225.t1;Parent=MS.gene57225.t1 |
| Gene Sequence |
| Protein sequence |
