AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00617

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00617.t1 AT4G06634 68.407 364 99 7 10 361 12 371 6.29e-161 457
MS.gene00617.t1 AT4G06634 65.489 368 96 9 10 361 12 364 1.67e-148 425
MS.gene00617.t1 AT4G06634 65.964 332 97 7 42 361 6 333 6.75e-135 389
MS.gene00617.t1 AT3G48430 27.273 121 80 2 77 195 1243 1357 2.94e-11 65.9
MS.gene00617.t1 AT3G48430 27.273 121 80 2 77 195 884 998 3.76e-11 65.5

Find 95 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAGGCTCCCGCTGTTAAA+TGG 0.155162 2.1:-75797431 MS.gene00617:CDS
GTTTCTGTTGCAGAAATTTC+TGG 0.165103 2.1:-75795278 MS.gene00617:intron
TCAGTAGTTGGCTCGGGTTC+TGG 0.253968 2.1:+75795817 None:intergenic
TACTTTATCGGCACATCTAT+TGG 0.312836 2.1:+75792785 None:intergenic
GCGTATCTCTTCCCACAATC+TGG 0.321481 2.1:+75794447 None:intergenic
TTACGCTGAGCAACTTTAGA+AGG 0.345270 2.1:+75792446 None:intergenic
CCTTTCCACACCCCTCATAA+TGG 0.376204 2.1:+75795692 None:intergenic
GCAGTTTGTTTGCCATTATG+AGG 0.386353 2.1:-75795704 MS.gene00617:CDS
CTAAAGTTGCTCAGCGTAAA+GGG 0.392561 2.1:-75792442 MS.gene00617:CDS
ATGCTGTTAAGATGGGTAAC+AGG 0.398286 2.1:-75797168 MS.gene00617:intron
GGAGGAGTTGCATACTTTAT+CGG 0.401475 2.1:+75792773 None:intergenic
CCTTCATAAGGACATGCATA+TGG 0.405323 2.1:+75792683 None:intergenic
CTCTTCCCACAATCTGGGTA+TGG 0.407430 2.1:+75794453 None:intergenic
GGTTCTGGCTCAGGAGCTAA+TGG 0.412849 2.1:+75795832 None:intergenic
GTTGGCTCGGGTTCTGGCTC+AGG 0.414498 2.1:+75795823 None:intergenic
GGGAGCCTTGGACGTGAGAA+AGG 0.426315 2.1:+75797443 None:intergenic
GTTTCTTCTTTCACTGGCCA+AGG 0.432210 2.1:+75792380 None:intergenic
CCATTTAACAGCGGGAGCCT+TGG 0.434294 2.1:+75797431 None:intergenic
CAAGGCTCCCGCTGTTAAAT+GGG 0.434337 2.1:-75797430 MS.gene00617:CDS
AAGACATTTCTTAATTCATA+CGG 0.439731 2.1:-75795239 MS.gene00617:CDS
GCAAGTGATCACGATGCTTA+TGG 0.440454 2.1:-75792533 MS.gene00617:CDS
AGACATTTCTTAATTCATAC+GGG 0.448713 2.1:-75795238 MS.gene00617:CDS
TTATAGATGCTGGTGCTTTG+AGG 0.456478 2.1:-75795753 MS.gene00617:CDS
TCTAAAGTTGCTCAGCGTAA+AGG 0.457185 2.1:-75792443 MS.gene00617:CDS
TCGTAAGTTTCTTCTTTCAC+TGG 0.459248 2.1:+75792374 None:intergenic
CAATATGCAGGCCTTCTCCT+TGG 0.459806 2.1:-75794532 MS.gene00617:intron
CAGTTTGTTTGCCATTATGA+GGG 0.471982 2.1:-75795703 MS.gene00617:CDS
CATAAATGCCTTGAAAGAAA+AGG 0.473578 2.1:-75795863 MS.gene00617:CDS
CATTGCTTCCCATCATGAAA+AGG 0.475165 2.1:-75794400 MS.gene00617:intron
TAATAATGCTGAAAATGAAA+TGG 0.485384 2.1:-75792561 MS.gene00617:CDS
CCACAAGACGTTGTTGCCAC+TGG 0.487699 2.1:-75797201 MS.gene00617:CDS
AGCTTAAACTGCATTTAAAG+AGG 0.494339 2.1:-75792631 MS.gene00617:CDS
ATATTAAAAGTGGCAGGGGT+TGG 0.494716 2.1:+75792413 None:intergenic
TTAGCCATATTAAAAGTGGC+AGG 0.498748 2.1:+75792407 None:intergenic
CCATATGCATGTCCTTATGA+AGG 0.500362 2.1:-75792683 MS.gene00617:CDS
CTTTGTAGCTATGAAGGCTG+TGG 0.501431 2.1:-75795784 MS.gene00617:CDS
TCCTTATGAAGGGTGTGAAA+AGG 0.501607 2.1:-75792672 MS.gene00617:CDS
TGAAAATGCTATGCATGCTC+TGG 0.502807 2.1:-75792585 MS.gene00617:CDS
GGAAGTGTATGCTGTTAAGA+TGG 0.510117 2.1:-75797176 MS.gene00617:CDS
AAGTACTTCAGTAGTTGGCT+CGG 0.511218 2.1:+75795810 None:intergenic
GAAGATGGTTGGAGATATGC+TGG 0.512941 2.1:-75792308 MS.gene00617:CDS
AGGAAGCATTCCCACATCCA+TGG 0.515275 2.1:-75795733 MS.gene00617:CDS
ACTGCCTCTCTCCATGGATG+TGG 0.516577 2.1:+75795722 None:intergenic
GGAGCCTTGGACGTGAGAAA+GGG 0.516870 2.1:+75797444 None:intergenic
CGTATCTCTTCCCACAATCT+GGG 0.520117 2.1:+75794448 None:intergenic
CTTCATAAGGACATGCATAT+GGG 0.522116 2.1:+75792684 None:intergenic
GTAAAAGTCAGAAGCAAAGC+AGG 0.525445 2.1:-75792493 MS.gene00617:CDS
AGTACTTCAGTAGTTGGCTC+GGG 0.526508 2.1:+75795811 None:intergenic
TTCTGGAGCGACATACGGTT+CGG 0.536084 2.1:-75792720 MS.gene00617:CDS
CAGCGAAGAAACTGAGGAGG+AGG 0.538145 2.1:-75792345 MS.gene00617:CDS
AGACCTTCTGGAGCGACATA+CGG 0.541337 2.1:-75792725 MS.gene00617:CDS
GTGTCTTCATGTGAGACCTC+AGG 0.542819 2.1:+75794502 None:intergenic
TCTTCCCACAATCTGGGTAT+GGG 0.550401 2.1:+75794454 None:intergenic
CGCTGAGCAACTTTAGAAGG+AGG 0.554525 2.1:+75792449 None:intergenic
TATGCCCATACCCAGATTGT+GGG 0.558178 2.1:-75794458 MS.gene00617:CDS
CTGTTAAATGGGTCAAACAA+TGG 0.559100 2.1:-75797419 MS.gene00617:intron
GTTTGCCATTATGAGGGGTG+TGG 0.559433 2.1:-75795697 MS.gene00617:CDS
CAAGACGTTGTTGCCACTGG+TGG 0.559549 2.1:-75797198 MS.gene00617:CDS
CCATTATGAGGGGTGTGGAA+AGG 0.561192 2.1:-75795692 MS.gene00617:intron
GTGACAATGTTGAAGATGGT+TGG 0.563304 2.1:-75792319 MS.gene00617:CDS
GCTTAAACTGCATTTAAAGA+GGG 0.566396 2.1:-75792630 MS.gene00617:CDS
AGCCATATTAAAAGTGGCAG+GGG 0.567185 2.1:+75792409 None:intergenic
GTGTGTCCTCATGAAGGCTG+TGG 0.567957 2.1:-75795202 MS.gene00617:CDS
CATTTAAAGAGGGAGCATCC+TGG 0.569801 2.1:-75792620 MS.gene00617:CDS
GGAAAGACATTTATAGATGC+TGG 0.570125 2.1:-75795763 MS.gene00617:CDS
TCCTCATGAAGGCTGTGGTA+AGG 0.574286 2.1:-75795197 MS.gene00617:intron
TGTTTGACCCATTTAACAGC+GGG 0.574962 2.1:+75797423 None:intergenic
AAACAAACTGCCTCTCTCCA+TGG 0.576594 2.1:+75795716 None:intergenic
ACGCCCCTTTCTCACGTCCA+AGG 0.578019 2.1:-75797448 MS.gene00617:CDS
GAAGTGTATGCTGTTAAGAT+GGG 0.578315 2.1:-75797175 MS.gene00617:CDS
ATATGCCCATACCCAGATTG+TGG 0.578913 2.1:-75794459 MS.gene00617:CDS
AGACCTCAGGTTAAAATCCA+AGG 0.579184 2.1:+75794515 None:intergenic
CTGCCTCTCTCCATGGATGT+GGG 0.586666 2.1:+75795723 None:intergenic
TAGCCATATTAAAAGTGGCA+GGG 0.588156 2.1:+75792408 None:intergenic
AGTTTGTTTGCCATTATGAG+GGG 0.589676 2.1:-75795702 MS.gene00617:CDS
CAGGTTAAAATCCAAGGAGA+AGG 0.604105 2.1:+75794521 None:intergenic
GAACCGTATGTCGCTCCAGA+AGG 0.605176 2.1:+75792722 None:intergenic
CATATGCATGTCCTTATGAA+GGG 0.608937 2.1:-75792682 MS.gene00617:CDS
AAACAACGAAGATGATGATG+AGG 0.613095 2.1:-75792285 MS.gene00617:CDS
GAGCCTTGGACGTGAGAAAG+GGG 0.615789 2.1:+75797445 None:intergenic
GATCGTGACAATGTTGAAGA+TGG 0.616587 2.1:-75792323 MS.gene00617:CDS
TATGGTGGAAAACGTTCCAA+TGG 0.620791 2.1:-75792515 MS.gene00617:CDS
ACATGCATATGGGCGATCAG+AGG 0.622960 2.1:+75792694 None:intergenic
AGTGATCACGATGCTTATGG+TGG 0.628298 2.1:-75792530 MS.gene00617:CDS
GGCGTCTCTCAAAGAGAGAG+TGG 0.633941 2.1:+75797466 None:intergenic
ACCTTACCACAGCCTTCATG+AGG 0.637114 2.1:+75795196 None:intergenic
AAGACGTTGTTGCCACTGGT+GGG 0.637791 2.1:-75797197 MS.gene00617:CDS
GACATTTCTTAATTCATACG+GGG 0.654030 2.1:-75795237 MS.gene00617:CDS
CAGCATACACTTCCCACCAG+TGG 0.655133 2.1:+75797185 None:intergenic
CCAGTGGCAACAACGTCTTG+TGG 0.655732 2.1:+75797201 None:intergenic
ATTCCCACATCCATGGAGAG+AGG 0.655979 2.1:-75795726 MS.gene00617:CDS
TGAAGACAGCGAAGAAACTG+AGG 0.661243 2.1:-75792351 MS.gene00617:CDS
AGACAGCGAAGAAACTGAGG+AGG 0.668007 2.1:-75792348 MS.gene00617:CDS
ACATTTCTTAATTCATACGG+GGG 0.674154 2.1:-75795236 MS.gene00617:CDS
TTGTTTGACCCATTTAACAG+CGG 0.696885 2.1:+75797422 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATAAAGATAAAAAAAAT+TGG + chr2.1:75795684-75795703 None:intergenic 10.0%
!! TATTTATATTCTATTCTAAA+TGG - chr2.1:75795405-75795424 MS.gene00617:intron 10.0%
!!! AATATATAAATTTTCAAGTT+CGG - chr2.1:75796402-75796421 MS.gene00617:intron 10.0%
!!! ATCTCAAATTTTTTTTTTTT+TGG + chr2.1:75792465-75792484 None:intergenic 10.0%
!! AAGAAAATCTTTAAACTATA+TGG - chr2.1:75795757-75795776 MS.gene00617:CDS 15.0%
!! AATGTACAATAAATATTGTT+TGG - chr2.1:75794879-75794898 MS.gene00617:intron 15.0%
!! CATTAAAAAAAAATGCAAAT+GGG + chr2.1:75793006-75793025 None:intergenic 15.0%
!! CTTGATTATTATAAATTTCA+GGG + chr2.1:75795622-75795641 None:intergenic 15.0%
!! TGTTATCTAATATTAAGTTA+AGG + chr2.1:75792927-75792946 None:intergenic 15.0%
!! TTGATTATTATAAATTTCAG+GGG + chr2.1:75795621-75795640 None:intergenic 15.0%
!! TTTATAATAATCAAGCAAAT+TGG - chr2.1:75795627-75795646 MS.gene00617:intron 15.0%
!!! ATATATAAATTTTCAAGTTC+GGG - chr2.1:75796403-75796422 MS.gene00617:intron 15.0%
!!! TATTTTAATACTATTTTGCA+AGG - chr2.1:75796734-75796753 MS.gene00617:intron 15.0%
!!! TTTTTTTGTTAAAGTTTGTT+TGG - chr2.1:75792484-75792503 MS.gene00617:CDS 15.0%
!! AACATTACAAATAACCTAAA+GGG + chr2.1:75792686-75792705 None:intergenic 20.0%
!! AAGACATTTCTTAATTCATA+CGG - chr2.1:75794509-75794528 MS.gene00617:CDS 20.0%
!! AATTACAAAAAATGGAAACT+AGG + chr2.1:75794256-75794275 None:intergenic 20.0%
!! AATTTACCAAAACAAAGTAA+AGG - chr2.1:75793286-75793305 MS.gene00617:intron 20.0%
!! ACTAGATGGAAAAATTAATA+AGG + chr2.1:75794355-75794374 None:intergenic 20.0%
!! AGAAGATGATTAATAGATTT+GGG - chr2.1:75794837-75794856 MS.gene00617:intron 20.0%
!! ATATTTGATCATTACAATGA+AGG + chr2.1:75794741-75794760 None:intergenic 20.0%
!! CATACAATATAATAATTGCT+TGG + chr2.1:75793801-75793820 None:intergenic 20.0%
!! CCATTAAAAAAAAATGCAAA+TGG + chr2.1:75793007-75793026 None:intergenic 20.0%
!! GCTTGATTATTATAAATTTC+AGG + chr2.1:75795623-75795642 None:intergenic 20.0%
!! GTTATACCTTTCAAATATTT+GGG - chr2.1:75795886-75795905 MS.gene00617:intron 20.0%
!! TAATAATGCTGAAAATGAAA+TGG - chr2.1:75797187-75797206 MS.gene00617:CDS 20.0%
!! TAGAAGATGATTAATAGATT+TGG - chr2.1:75794836-75794855 MS.gene00617:intron 20.0%
!! TGATTATTATAAATTTCAGG+GGG + chr2.1:75795620-75795639 None:intergenic 20.0%
!! TGTTATACCTTTCAAATATT+TGG - chr2.1:75795885-75795904 MS.gene00617:intron 20.0%
!!! AACTTTTTTATGAAACTAGA+TGG + chr2.1:75794369-75794388 None:intergenic 20.0%
!!! AATTTTAGTATCATATTGTC+TGG - chr2.1:75795148-75795167 MS.gene00617:intron 20.0%
!!! AGAAAGAATAATTTTTATGC+TGG - chr2.1:75795805-75795824 MS.gene00617:CDS 20.0%
!!! AGAATATTTTTTTTGTCACA+AGG + chr2.1:75795654-75795673 None:intergenic 20.0%
!!! ATTATGAACAGATTTTTTTG+GGG + chr2.1:75793504-75793523 None:intergenic 20.0%
!!! ATTGAAATTTTGTTAATGTC+AGG + chr2.1:75795481-75795500 None:intergenic 20.0%
!!! CATTATGAACAGATTTTTTT+GGG + chr2.1:75793505-75793524 None:intergenic 20.0%
!!! CCATTTGCATTTTTTTTTAA+TGG - chr2.1:75793004-75793023 MS.gene00617:intron 20.0%
!!! TAAGATTTTGGACTAATAAT+TGG - chr2.1:75796262-75796281 MS.gene00617:intron 20.0%
!!! TATATAAATTTTCAAGTTCG+GGG - chr2.1:75796404-75796423 MS.gene00617:intron 20.0%
!!! TTGAAATTTTGTTAATGTCA+GGG + chr2.1:75795480-75795499 None:intergenic 20.0%
!!! TTTCCATTTTTTGTAATTTC+AGG - chr2.1:75794258-75794277 MS.gene00617:intron 20.0%
!!! TTTGTAATGTTGATTTATCA+TGG - chr2.1:75792695-75792714 MS.gene00617:CDS 20.0%
!!! TTTTTTAGCCATATTAAAAG+TGG + chr2.1:75797348-75797367 None:intergenic 20.0%
! AAACAATAATACCACAAAGA+AGG + chr2.1:75795084-75795103 None:intergenic 25.0%
! ACACCTGAAATTACAAAAAA+TGG + chr2.1:75794264-75794283 None:intergenic 25.0%
! AGACATTTCTTAATTCATAC+GGG - chr2.1:75794510-75794529 MS.gene00617:CDS 25.0%
! AGATTGTTATGAAAGATAAC+TGG + chr2.1:75793666-75793685 None:intergenic 25.0%
! AGCTTCACAAAAATTGTTAA+AGG + chr2.1:75794173-75794192 None:intergenic 25.0%
! ATAACCTAAAGGGAAAATTA+TGG + chr2.1:75792676-75792695 None:intergenic 25.0%
! ATCATAGCAATGTTATTATC+AGG - chr2.1:75792521-75792540 MS.gene00617:CDS 25.0%
! ATTAACGTTGTACAATTTCA+GGG - chr2.1:75796516-75796535 MS.gene00617:intron 25.0%
! ATTATGGGTGCTTAATTTAT+TGG + chr2.1:75792660-75792679 None:intergenic 25.0%
! ATTGACGAAACTTACAATTT+CGG + chr2.1:75796592-75796573 None:intergenic 25.0%
! CAAAGTTGAGTTAAAAATTG+AGG + chr2.1:75792395-75792414 None:intergenic 25.0%
! CAACATTACAAATAACCTAA+AGG + chr2.1:75792687-75792706 None:intergenic 25.0%
! CAATTCATACTTGTAAAGTT+AGG + chr2.1:75792845-75792864 None:intergenic 25.0%
! CTAACTTTACAAGTATGAAT+TGG - chr2.1:75792843-75792862 MS.gene00617:intron 25.0%
! CTATTCTAAATGGAGTAAAT+AGG - chr2.1:75795415-75795434 MS.gene00617:intron 25.0%
! CTTAAGAGATCAATAAACAA+GGG + chr2.1:75794595-75794614 None:intergenic 25.0%
! CTTGAAAATTCATATGCAAA+AGG - chr2.1:75793250-75793269 MS.gene00617:intron 25.0%
! CTTGAAAATTCATATGCAAA+CGG + chr2.1:75793269-75793250 None:intergenic 25.0%
! CTTTAATGTTGTAACATACT+TGG - chr2.1:75794135-75794154 MS.gene00617:intron 25.0%
! CTTTGTGGTATTATTGTTTA+AGG - chr2.1:75795085-75795104 MS.gene00617:intron 25.0%
! GAAAAAACAGATCAGTAATT+AGG + chr2.1:75794719-75794738 None:intergenic 25.0%
! GAAAATGTTACTAGTTAGAT+TGG - chr2.1:75793026-75793045 MS.gene00617:intron 25.0%
! GATGTTTCATAAAAACTCTA+CGG - chr2.1:75792883-75792902 MS.gene00617:intron 25.0%
! TAACAGAAAAATTTGACGAA+GGG - chr2.1:75796484-75796503 MS.gene00617:intron 25.0%
! TAACCTAAAGGGAAAATTAT+GGG + chr2.1:75792675-75792694 None:intergenic 25.0%
! TAATGTCTAATCAGAAAGAT+AGG + chr2.1:75792747-75792766 None:intergenic 25.0%
! TAGGTTTATCTTTCAAAATG+TGG + chr2.1:75795915-75795934 None:intergenic 25.0%
! TATGAATGAATTAATACTGC+TGG - chr2.1:75793367-75793386 MS.gene00617:intron 25.0%
! TCATAGCAATGTTATTATCA+GGG - chr2.1:75792522-75792541 MS.gene00617:CDS 25.0%
! TCATTAAAGTAACTGATCTT+AGG + chr2.1:75795934-75795953 None:intergenic 25.0%
! TGTCAATCAAAAATTGTTTG+AGG + chr2.1:75796919-75796938 None:intergenic 25.0%
! TTAATATGGCTAAAAAACCT+TGG - chr2.1:75797351-75797370 MS.gene00617:intron 25.0%
! TTTCCAAAATTCATATGAAG+TGG - chr2.1:75796117-75796136 MS.gene00617:intron 25.0%
!! AATTATCTTTTCCAAATGCA+AGG + chr2.1:75795132-75795151 None:intergenic 25.0%
!! ACTTGTTGATCATAATCATT+GGG - chr2.1:75796367-75796386 MS.gene00617:intron 25.0%
!! CACATTTAGAATGAGTAAAT+AGG + chr2.1:75796610-75796629 None:intergenic 25.0%
!! GGAATTTTTCTGTCTATAAT+GGG - chr2.1:75795994-75796013 MS.gene00617:intron 25.0%
!! TAGCATTTTCATCATTTATG+TGG + chr2.1:75797154-75797173 None:intergenic 25.0%
!! TATCCACTTCATATGAATTT+TGG + chr2.1:75796123-75796142 None:intergenic 25.0%
!! TATCTGAAATTAAGAGATCA+CGG - chr2.1:75793319-75793338 MS.gene00617:intron 25.0%
!! TATTTGAGATAGTTATGTCA+GGG + chr2.1:75793472-75793491 None:intergenic 25.0%
!! TGAAATTTTGTTAATGTCAG+GGG + chr2.1:75795479-75795498 None:intergenic 25.0%
!! TTCTTTTTCCTTTTCTTTCA+AGG + chr2.1:75793896-75793915 None:intergenic 25.0%
!! TTGGTGCAAATATAAGATTT+TGG - chr2.1:75796250-75796269 MS.gene00617:intron 25.0%
!! TTTCTTTTTGCAATTACCTA+TGG - chr2.1:75796061-75796080 MS.gene00617:intron 25.0%
!! TTTTGAATCACCTTTATGTT+TGG - chr2.1:75794632-75794651 MS.gene00617:intron 25.0%
!!! AAATTGAGTTGATGAAGAAA+AGG + chr2.1:75792362-75792381 None:intergenic 25.0%
!!! AATTGAGTTGATGAAGAAAA+GGG + chr2.1:75792361-75792380 None:intergenic 25.0%
!!! AATTTTTGATTGAGCACTTT+TGG - chr2.1:75796861-75796880 MS.gene00617:intron 25.0%
!!! ATATAAATTTTCAAGTTCGG+GGG - chr2.1:75796405-75796424 MS.gene00617:intron 25.0%
!!! ATGATTTTAATATGTGCACT+TGG - chr2.1:75796670-75796689 MS.gene00617:intron 25.0%
!!! ATGGTTTTATTGATGCAAAA+AGG - chr2.1:75793706-75793725 MS.gene00617:intron 25.0%
!!! ATTTTCAAGCTTCAAATCTA+TGG - chr2.1:75793149-75793168 MS.gene00617:intron 25.0%
!!! GCATTATGAACAGATTTTTT+TGG + chr2.1:75793506-75793525 None:intergenic 25.0%
!!! TTATGAACAGATTTTTTTGG+GGG + chr2.1:75793503-75793522 None:intergenic 25.0%
AAAATCATACTTCATGAGAC+AGG + chr2.1:75796658-75796677 None:intergenic 30.0%
AAACAGAATATGAAGACTGA+GGG - chr2.1:75797486-75797505 MS.gene00617:CDS 30.0%
AACAGAAAAATTTGACGAAG+GGG - chr2.1:75796485-75796504 MS.gene00617:intron 30.0%
AAGATAACTGGAAAGCAAAT+TGG + chr2.1:75793654-75793673 None:intergenic 30.0%
AATGATTCAAACCTTCTTTG+TGG - chr2.1:75795070-75795089 MS.gene00617:intron 30.0%
ACAAAAAATGGAAACTAGGA+TGG + chr2.1:75794252-75794271 None:intergenic 30.0%
ACATTTCTTAATTCATACGG+GGG - chr2.1:75794512-75794531 MS.gene00617:CDS 30.0%
ACGAAACTTACAATTTCAAG+GGG - chr2.1:75796577-75796596 MS.gene00617:intron 30.0%
AGCTCAATTGACAGTAAAAA+AGG + chr2.1:75792611-75792630 None:intergenic 30.0%
AGCTTAAACTGCATTTAAAG+AGG - chr2.1:75797117-75797136 MS.gene00617:intron 30.0%
ATGGAATATGCCAAACATAA+AGG + chr2.1:75794645-75794664 None:intergenic 30.0%
ATTAACGTTGTGCAATTTCA+GGG + chr2.1:75795509-75795528 None:intergenic 30.0%
CAAAAAATGGAAACTAGGAT+GGG + chr2.1:75794251-75794270 None:intergenic 30.0%
CATAAATGCCTTGAAAGAAA+AGG - chr2.1:75793885-75793904 MS.gene00617:intron 30.0%
CATATGCAAAAGGATCAAAA+GGG - chr2.1:75793260-75793279 MS.gene00617:intron 30.0%
CCTTAAGAGATCAATAAACA+AGG + chr2.1:75794596-75794615 None:intergenic 30.0%
CTAACAGAAAAATTTGACGA+AGG - chr2.1:75796483-75796502 MS.gene00617:intron 30.0%
CTTGTTGATCATAATCATTG+GGG - chr2.1:75796368-75796387 MS.gene00617:intron 30.0%
GACATTTCTTAATTCATACG+GGG - chr2.1:75794511-75794530 MS.gene00617:CDS 30.0%
GACGAAACTTACAATTTCAA+GGG - chr2.1:75796576-75796595 MS.gene00617:intron 30.0%
GATCTATCTTGAGCAATTAT+TGG + chr2.1:75794333-75794352 None:intergenic 30.0%
GATTAACGTTGTACAATTTC+AGG - chr2.1:75796515-75796534 MS.gene00617:intron 30.0%
GCTCAATCAAAAATTGTTTG+AGG + chr2.1:75796856-75796875 None:intergenic 30.0%
GCTTAAACTGCATTTAAAGA+GGG - chr2.1:75797118-75797137 MS.gene00617:intron 30.0%
TAACGGAAAAATTTGACAGA+GGG + chr2.1:75795541-75795560 None:intergenic 30.0%
TAAGATTCATGTGCAAACAT+GGG + chr2.1:75793221-75793240 None:intergenic 30.0%
TCATATGCAAAAGGATCAAA+AGG - chr2.1:75793259-75793278 MS.gene00617:intron 30.0%
TCATGTTCTTAATCAAACGA+TGG - chr2.1:75792809-75792828 MS.gene00617:intron 30.0%
TGACGAAACTTACAATTTCA+AGG - chr2.1:75796575-75796594 MS.gene00617:intron 30.0%
TTAACGTTGTACAATTTCAG+GGG - chr2.1:75796517-75796536 MS.gene00617:intron 30.0%
TTCATATCGGATTCAATCAT+GGG + chr2.1:75795011-75795030 None:intergenic 30.0%
TTCTAAATAGACCTGACATT+TGG + chr2.1:75794433-75794452 None:intergenic 30.0%
TTGACGAAACTTACAATTTC+GGG + chr2.1:75796593-75796574 None:intergenic 30.0%
! AAATTTTGTTAATGTCAGGG+GGG + chr2.1:75795477-75795496 None:intergenic 30.0%
! AAGAGTTTTTGCTGATATTC+AGG + chr2.1:75794673-75794692 None:intergenic 30.0%
! ACTCTAAAGATCATTGCTAT+TGG - chr2.1:75796231-75796250 MS.gene00617:intron 30.0%
! AGAGTTTTTGCTGATATTCA+GGG + chr2.1:75794672-75794691 None:intergenic 30.0%
! AGGTAATGAAACTGTTTCTT+CGG - chr2.1:75794076-75794095 MS.gene00617:intron 30.0%
! ATCTGAAATTAAGAGATCAC+GGG - chr2.1:75793320-75793339 MS.gene00617:intron 30.0%
! ATTAACCAACCTTTTCATGA+TGG + chr2.1:75795360-75795379 None:intergenic 30.0%
! CAAACTCATGTATTTCTGAA+TGG - chr2.1:75793687-75793706 MS.gene00617:intron 30.0%
! CACTTGTTGATCATAATCAT+TGG - chr2.1:75796366-75796385 MS.gene00617:intron 30.0%
! CCTTGTTTATTGATCTCTTA+AGG - chr2.1:75794593-75794612 MS.gene00617:intron 30.0%
! CTTTTTCTTTGTAGCTATGA+AGG - chr2.1:75793958-75793977 MS.gene00617:intron 30.0%
! GAAATTTTGTTAATGTCAGG+GGG + chr2.1:75795478-75795497 None:intergenic 30.0%
! GATATCTGAATTTTTCGCAA+AGG - chr2.1:75795709-75795728 MS.gene00617:CDS 30.0%
! GGGAATTTTTCTGTCTATAA+TGG - chr2.1:75795993-75796012 MS.gene00617:intron 30.0%
! GTATTTGAGATAGTTATGTC+AGG + chr2.1:75793473-75793492 None:intergenic 30.0%
! TTAACCAACCTTTTCATGAT+GGG + chr2.1:75795359-75795378 None:intergenic 30.0%
! TTTGGACTAATAATTGGCTT+GGG - chr2.1:75796268-75796287 MS.gene00617:intron 30.0%
! TTTTGGACTAATAATTGGCT+TGG - chr2.1:75796267-75796286 MS.gene00617:intron 30.0%
! TTTTTCGCAAAGGATCAAAT+AGG - chr2.1:75795719-75795738 MS.gene00617:CDS 30.0%
!! AGAAAAAGTACTTCAGTAGT+TGG + chr2.1:75793946-75793965 None:intergenic 30.0%
!! ATTGAGTTGATGAAGAAAAG+GGG + chr2.1:75792360-75792379 None:intergenic 30.0%
!! CTCATCAAGTTTGTTATTCA+TGG - chr2.1:75796027-75796046 MS.gene00617:intron 30.0%
!! CTTTTCTTTCAAGGCATTTA+TGG + chr2.1:75793887-75793906 None:intergenic 30.0%
!! GTTTTTGTTTGCTTTTCTGA+AGG + chr2.1:75796999-75797018 None:intergenic 30.0%
!! TCATGTAATTAGCTTTAACC+TGG - chr2.1:75795861-75795880 MS.gene00617:CDS 30.0%
!! TTAAAGTTAAGCTTGCTACT+TGG - chr2.1:75795968-75795987 MS.gene00617:intron 30.0%
!! TTTGCTCCTTTACTTTGTTT+TGG + chr2.1:75793295-75793314 None:intergenic 30.0%
!!! CTGCTATTTTACTTCTTTGT+TGG - chr2.1:75796162-75796181 MS.gene00617:intron 30.0%
!!! CTGTGTTTTGTTTTCTTTAG+AGG - chr2.1:75793858-75793877 MS.gene00617:intron 30.0%
!!! TATAAATTTTCAAGTTCGGG+GGG - chr2.1:75796406-75796425 MS.gene00617:intron 30.0%
AAAAATGCAAATGGGCCAAA+AGG + chr2.1:75792998-75793017 None:intergenic 35.0%
AAAATGCAAATGGGCCAAAA+GGG + chr2.1:75792997-75793016 None:intergenic 35.0%
AACGGAAAAATTTGACAGAG+GGG + chr2.1:75795540-75795559 None:intergenic 35.0%
ACAAGTCAAAACCTTGCATT+TGG - chr2.1:75795118-75795137 MS.gene00617:intron 35.0%
ACAGAAAAATTTGACGAAGG+GGG - chr2.1:75796486-75796505 MS.gene00617:intron 35.0%
ACATAAGTGCAAAACTTCAG+GGG - chr2.1:75796437-75796456 MS.gene00617:intron 35.0%
ACATAAGTGCAAAACTTCAG+GGG + chr2.1:75796456-75796437 None:intergenic 35.0%
ACTGTAAATCATCGTTTCCA+TGG - chr2.1:75794919-75794938 MS.gene00617:intron 35.0%
AGATCAATAAACAAGGGCAA+TGG + chr2.1:75794589-75794608 None:intergenic 35.0%
AGTATAGGTGAGTAAAGACA+TGG + chr2.1:75794228-75794247 None:intergenic 35.0%
AGTTGAATGTTAAGCAAGCT+TGG - chr2.1:75793768-75793787 MS.gene00617:intron 35.0%
ATTCATATGCAAACGGATCA+AGG + chr2.1:75793131-75793150 None:intergenic 35.0%
CACATAAGTGCAAAACTTCA+GGG - chr2.1:75796436-75796455 MS.gene00617:intron 35.0%
CACATAAGTGCAAAACTTCA+GGG + chr2.1:75796455-75796436 None:intergenic 35.0%
CATATGCATGTCCTTATGAA+GGG - chr2.1:75797066-75797085 MS.gene00617:intron 35.0%
CGAAACTTACAATTTCAAGG+GGG - chr2.1:75796578-75796597 MS.gene00617:intron 35.0%
CTAACGGAAAAATTTGACAG+AGG + chr2.1:75795542-75795561 None:intergenic 35.0%
CTAAGATTCATGTGCAAACA+TGG + chr2.1:75793222-75793241 None:intergenic 35.0%
CTGTTAAATGGGTCAAACAA+TGG - chr2.1:75792329-75792348 MS.gene00617:CDS 35.0%
CTTCATAAGGACATGCATAT+GGG + chr2.1:75797067-75797086 None:intergenic 35.0%
CTTCATATCGGATTCAATCA+TGG + chr2.1:75795012-75795031 None:intergenic 35.0%
GAAACAGAATATGAAGACTG+AGG - chr2.1:75797485-75797504 MS.gene00617:CDS 35.0%
GAAGTGTATGCTGTTAAGAT+GGG - chr2.1:75792573-75792592 MS.gene00617:CDS 35.0%
GATTAACGTTGTGCAATTTC+AGG + chr2.1:75795510-75795529 None:intergenic 35.0%
GCCATGAACTAACTTCATAT+CGG + chr2.1:75795024-75795043 None:intergenic 35.0%
GGAAAGACATTTATAGATGC+TGG - chr2.1:75793985-75794004 MS.gene00617:intron 35.0%
GTAATGCTTCATTTCTACGT+TGG - chr2.1:75793583-75793602 MS.gene00617:intron 35.0%
GTATATGACTATTCAGCAGT+GGG - chr2.1:75794795-75794814 MS.gene00617:intron 35.0%
GTGTTCACAATCACAATAGA+TGG - chr2.1:75796627-75796646 MS.gene00617:intron 35.0%
GTTCTCAGTCTTCAAATCTA+TGG - chr2.1:75793188-75793207 MS.gene00617:intron 35.0%
GTTTCTGTTGCAGAAATTTC+TGG - chr2.1:75794470-75794489 MS.gene00617:CDS 35.0%
TAACGTTGTACAATTTCAGG+GGG - chr2.1:75796518-75796537 MS.gene00617:intron 35.0%
TACTTTATCGGCACATCTAT+TGG + chr2.1:75796966-75796985 None:intergenic 35.0%
TAGATCACAGTTACACAAAC+AGG + chr2.1:75795387-75795406 None:intergenic 35.0%
TAGCCATATTAAAAGTGGCA+GGG + chr2.1:75797343-75797362 None:intergenic 35.0%
TCATATCGGATTCAATCATG+GGG + chr2.1:75795010-75795029 None:intergenic 35.0%
TCCGATATGAAGTTAGTTCA+TGG - chr2.1:75795020-75795039 MS.gene00617:intron 35.0%
TCGCTGTAGAAATTCATTCA+AGG + chr2.1:75792419-75792438 None:intergenic 35.0%
TCGTAAGTTTCTTCTTTCAC+TGG + chr2.1:75797377-75797396 None:intergenic 35.0%
TCTTATGTTTGCCAAATGTC+AGG - chr2.1:75794419-75794438 MS.gene00617:CDS 35.0%
TGACGAAACTTACAATTTCG+GGG + chr2.1:75795450-75795469 None:intergenic 35.0%
TGGACTCCCAAATATTTGAA+AGG + chr2.1:75795895-75795914 None:intergenic 35.0%
TTAACGTTGTGCAATTTCAG+GGG + chr2.1:75795508-75795527 None:intergenic 35.0%
TTAGCCATATTAAAAGTGGC+AGG + chr2.1:75797344-75797363 None:intergenic 35.0%
TTCATATGCAAACGGATCAA+GGG + chr2.1:75793130-75793149 None:intergenic 35.0%
TTGGTTTCTCGTTCATTTGT+TGG + chr2.1:75792446-75792465 None:intergenic 35.0%
TTGTTTGACCCATTTAACAG+CGG + chr2.1:75792329-75792348 None:intergenic 35.0%
TTTCGAAGCAACTTGATCAA+TGG - chr2.1:75796094-75796113 MS.gene00617:intron 35.0%
! AAACAACGAAGATGATGATG+AGG - chr2.1:75797463-75797482 MS.gene00617:CDS 35.0%
! AGTTTGTTTGCCATTATGAG+GGG - chr2.1:75794046-75794065 MS.gene00617:intron 35.0%
! ATTTGAAAGGTATAACAGCC+AGG + chr2.1:75795882-75795901 None:intergenic 35.0%
! CAAAACGTCATGTTGACTAA+CGG + chr2.1:75795558-75795577 None:intergenic 35.0%
! CAGTTTGTTTGCCATTATGA+GGG - chr2.1:75794045-75794064 MS.gene00617:intron 35.0%
! TGTATGCTGGTTATGTTGTA+TGG - chr2.1:75794301-75794320 MS.gene00617:intron 35.0%
! TTGCTTCTGACTTTTACCAT+TGG + chr2.1:75797252-75797271 None:intergenic 35.0%
! TTTTCATCATTTATGTGGCC+AGG + chr2.1:75797149-75797168 None:intergenic 35.0%
!! ACTAATAATTGGCTTGGGAT+TGG - chr2.1:75796273-75796292 MS.gene00617:intron 35.0%
!! TTTGTTTGCTTTTCTGAAGG+AGG + chr2.1:75796996-75797015 None:intergenic 35.0%
!! TTTTGTTTGTGCCAATATGC+AGG - chr2.1:75795204-75795223 MS.gene00617:CDS 35.0%
AACGTTGTACAATTTCAGGG+GGG - chr2.1:75796519-75796538 MS.gene00617:intron 40.0%
AAGGTTGTTCTAGTACGACA+TGG + chr2.1:75793426-75793445 None:intergenic 40.0%
AAGTACTTCAGTAGTTGGCT+CGG + chr2.1:75793941-75793960 None:intergenic 40.0%
ACAAAAACTGCTAGACCTTC+TGG - chr2.1:75797011-75797030 MS.gene00617:intron 40.0%
ACAAGTGAGCAACAAATGTG+AGG + chr2.1:75796353-75796372 None:intergenic 40.0%
ACGAAACTTACAATTTCGGG+GGG + chr2.1:75795448-75795467 None:intergenic 40.0%
ACGGAAAAATTTGACAGAGG+GGG + chr2.1:75795539-75795558 None:intergenic 40.0%
AGACCTCAGGTTAAAATCCA+AGG + chr2.1:75795236-75795255 None:intergenic 40.0%
AGCCATATTAAAAGTGGCAG+GGG + chr2.1:75797342-75797361 None:intergenic 40.0%
AGTAACACACACATGTATGC+TGG - chr2.1:75794288-75794307 MS.gene00617:intron 40.0%
AGTTGCTTCGAAAGATGTAC+AGG + chr2.1:75796087-75796106 None:intergenic 40.0%
ATAAGTGCAAAACTTCAGGG+GGG + chr2.1:75796458-75796439 None:intergenic 40.0%
ATATTAAAAGTGGCAGGGGT+TGG + chr2.1:75797338-75797357 None:intergenic 40.0%
ATCGTTTCCATGGTCACTAT+GGG - chr2.1:75794929-75794948 MS.gene00617:intron 40.0%
ATGCTGTTAAGATGGGTAAC+AGG - chr2.1:75792580-75792599 MS.gene00617:CDS 40.0%
CAAGCACAGAAATGCATGTT+AGG - chr2.1:75794112-75794131 MS.gene00617:intron 40.0%
CAGGTTAAAATCCAAGGAGA+AGG + chr2.1:75795230-75795249 None:intergenic 40.0%
CATAAGTGCAAAACTTCAGG+GGG - chr2.1:75796438-75796457 MS.gene00617:intron 40.0%
CATAAGTGCAAAACTTCAGG+GGG + chr2.1:75796457-75796438 None:intergenic 40.0%
CATTGCTTCCCATCATGAAA+AGG - chr2.1:75795348-75795367 MS.gene00617:intron 40.0%
CCATATGCATGTCCTTATGA+AGG - chr2.1:75797065-75797084 MS.gene00617:intron 40.0%
CCTTCATAAGGACATGCATA+TGG + chr2.1:75797068-75797087 None:intergenic 40.0%
CGTCAAATGAAACCTCTAGA+TGG + chr2.1:75796699-75796718 None:intergenic 40.0%
CTAAAGTTGCTCAGCGTAAA+GGG - chr2.1:75797306-75797325 MS.gene00617:intron 40.0%
CTACGGCAAAATTACACTTC+TGG - chr2.1:75792900-75792919 MS.gene00617:intron 40.0%
CTGTTCATGTGTGCTATGAA+AGG + chr2.1:75793445-75793464 None:intergenic 40.0%
GACGAAACTTACAATTTCGG+GGG + chr2.1:75795449-75795468 None:intergenic 40.0%
GATCGTGACAATGTTGAAGA+TGG - chr2.1:75797425-75797444 MS.gene00617:CDS 40.0%
GCACATAAGTGCAAAACTTC+AGG - chr2.1:75796435-75796454 MS.gene00617:intron 40.0%
GCACATAAGTGCAAAACTTC+AGG + chr2.1:75796454-75796435 None:intergenic 40.0%
GGAGGAGTTGCATACTTTAT+CGG + chr2.1:75796978-75796997 None:intergenic 40.0%
GGTATATGACTATTCAGCAG+TGG - chr2.1:75794794-75794813 MS.gene00617:intron 40.0%
GTAAAAGTCAGAAGCAAAGC+AGG - chr2.1:75797255-75797274 MS.gene00617:intron 40.0%
GTGACAATGTTGAAGATGGT+TGG - chr2.1:75797429-75797448 MS.gene00617:CDS 40.0%
TAACGTTGTGCAATTTCAGG+GGG + chr2.1:75795507-75795526 None:intergenic 40.0%
TCATATGCAAACGGATCAAG+GGG + chr2.1:75793129-75793148 None:intergenic 40.0%
TCATTCATACATGCAGCGTT+TGG + chr2.1:75793356-75793375 None:intergenic 40.0%
TCTAGTCTACCCTACTAAGT+GGG - chr2.1:75793532-75793551 MS.gene00617:intron 40.0%
TGAAAATGCTATGCATGCTC+TGG - chr2.1:75797163-75797182 MS.gene00617:intron 40.0%
TGCTGATATTCAGGGTATGA+TGG + chr2.1:75794664-75794683 None:intergenic 40.0%
TGTTTGACCCATTTAACAGC+GGG + chr2.1:75792328-75792347 None:intergenic 40.0%
TTACGCTGAGCAACTTTAGA+AGG + chr2.1:75797305-75797324 None:intergenic 40.0%
TTATAGATGCTGGTGCTTTG+AGG - chr2.1:75793995-75794014 MS.gene00617:intron 40.0%
TTCTAGTCTACCCTACTAAG+TGG - chr2.1:75793531-75793550 MS.gene00617:intron 40.0%
TTTGAAGACTGAGAACTCAC+AGG + chr2.1:75793184-75793203 None:intergenic 40.0%
! AAGCCTTATCCCACTTAGTA+GGG + chr2.1:75793544-75793563 None:intergenic 40.0%
! ATGATGCATGACTGCACTTT+TGG - chr2.1:75796798-75796817 MS.gene00617:intron 40.0%
! GATTTTGTGTGTCCTCATGA+AGG - chr2.1:75794540-75794559 MS.gene00617:intron 40.0%
! GCACCCATAATTTTCCCTTT+AGG - chr2.1:75792669-75792688 MS.gene00617:CDS 40.0%
! GCAGTTTGTTTGCCATTATG+AGG - chr2.1:75794044-75794063 MS.gene00617:intron 40.0%
! GGAAGTGTATGCTGTTAAGA+TGG - chr2.1:75792572-75792591 MS.gene00617:CDS 40.0%
! TATGGTGGAAAACGTTCCAA+TGG - chr2.1:75797233-75797252 MS.gene00617:intron 40.0%
! TCCTTATGAAGGGTGTGAAA+AGG - chr2.1:75797076-75797095 MS.gene00617:intron 40.0%
! TCTAAAGTTGCTCAGCGTAA+AGG - chr2.1:75797305-75797324 MS.gene00617:intron 40.0%
!! AGTTAAGCTTGCTACTTGGA+AGG - chr2.1:75795972-75795991 MS.gene00617:intron 40.0%
!! GTTAAGCTTGCTACTTGGAA+GGG - chr2.1:75795973-75795992 MS.gene00617:intron 40.0%
!! TCTCCTTGGATTTTAACCTG+AGG - chr2.1:75795230-75795249 MS.gene00617:CDS 40.0%
!!! AACCCCTGCCACTTTTAATA+TGG - chr2.1:75797337-75797356 MS.gene00617:intron 40.0%
!!! AGGCATTTTCAAGTTTGGCT+TGG + chr2.1:75797282-75797301 None:intergenic 40.0%
!!! GAAGGAGGCATTTTCAAGTT+TGG + chr2.1:75797287-75797306 None:intergenic 40.0%
!!! GGCATTTTCAAGTTTGGCTT+GGG + chr2.1:75797281-75797300 None:intergenic 40.0%
!!! TGGTTTTTTCTCCTTCGTTC+CGG - chr2.1:75793046-75793065 MS.gene00617:intron 40.0%
AAACAAACTGCCTCTCTCCA+TGG + chr2.1:75794035-75794054 None:intergenic 45.0%
AACGTTGTGCAATTTCAGGG+GGG + chr2.1:75795506-75795525 None:intergenic 45.0%
AGTGATCACGATGCTTATGG+TGG - chr2.1:75797218-75797237 MS.gene00617:intron 45.0%
ATATGCCCATACCCAGATTG+TGG - chr2.1:75795289-75795308 MS.gene00617:intron 45.0%
ATCCTGCTGCTCAAACAAGA+TGG - chr2.1:75793094-75793113 MS.gene00617:intron 45.0%
CATATGCAAACGGATCAAGG+GGG + chr2.1:75793128-75793147 None:intergenic 45.0%
CATCGTTTCCATGGTCACTA+TGG - chr2.1:75794928-75794947 MS.gene00617:intron 45.0%
CGAAACTTACAATTTCGGGG+GGG + chr2.1:75795447-75795466 None:intergenic 45.0%
CGTATCTCTTCCCACAATCT+GGG + chr2.1:75795303-75795322 None:intergenic 45.0%
CTACCCTACTAAGTGGGATA+AGG - chr2.1:75793538-75793557 MS.gene00617:intron 45.0%
CTACTAAGTGGGATAAGGCT+TGG - chr2.1:75793543-75793562 MS.gene00617:intron 45.0%
CTTAATTCATACGGGGGAGA+GGG - chr2.1:75794518-75794537 MS.gene00617:CDS 45.0%
CTTTGTAGCTATGAAGGCTG+TGG - chr2.1:75793964-75793983 MS.gene00617:intron 45.0%
GAAGATGGTTGGAGATATGC+TGG - chr2.1:75797440-75797459 MS.gene00617:CDS 45.0%
GCAAGTGATCACGATGCTTA+TGG - chr2.1:75797215-75797234 MS.gene00617:intron 45.0%
GCCAAAAGGGCTAAAATGAC+GGG + chr2.1:75792984-75793003 None:intergenic 45.0%
GCTTCCCATCATGAAAAGGT+TGG - chr2.1:75795352-75795371 MS.gene00617:intron 45.0%
GGCCAAAAGGGCTAAAATGA+CGG + chr2.1:75792985-75793004 None:intergenic 45.0%
GTTTCTTCTTTCACTGGCCA+AGG + chr2.1:75797371-75797390 None:intergenic 45.0%
TATGCCCATACCCAGATTGT+GGG - chr2.1:75795290-75795309 MS.gene00617:intron 45.0%
TATTGGTGTACTCTGCAGTG+AGG + chr2.1:75796949-75796968 None:intergenic 45.0%
TCATGTGCAAACATGGGTGA+AGG + chr2.1:75793215-75793234 None:intergenic 45.0%
TCCTGCTGCTCAAACAAGAT+GGG - chr2.1:75793095-75793114 MS.gene00617:intron 45.0%
TCGAAAGATGTACAGGCCAT+AGG + chr2.1:75796080-75796099 None:intergenic 45.0%
TCTTAATTCATACGGGGGAG+AGG - chr2.1:75794517-75794536 MS.gene00617:CDS 45.0%
TCTTCCCACAATCTGGGTAT+GGG + chr2.1:75795297-75795316 None:intergenic 45.0%
TGAAGACAGCGAAGAAACTG+AGG - chr2.1:75797397-75797416 MS.gene00617:intron 45.0%
TGCACTTGGTTTCCATCTAG+AGG - chr2.1:75796684-75796703 MS.gene00617:intron 45.0%
TTCGAAACCCATAGTGACCA+TGG + chr2.1:75794939-75794958 None:intergenic 45.0%
! AGTACTTCAGTAGTTGGCTC+GGG + chr2.1:75793940-75793959 None:intergenic 45.0%
! ATAAGGCTTGGTTGTGTTGG+TGG - chr2.1:75793555-75793574 MS.gene00617:intron 45.0%
! CAAGCATTGCACTTCAGACA+GGG + chr2.1:75795840-75795859 None:intergenic 45.0%
! CAAGCCTTATCCCACTTAGT+AGG + chr2.1:75793545-75793564 None:intergenic 45.0%
! GCCTTTTCACACCCTTCATA+AGG + chr2.1:75797080-75797099 None:intergenic 45.0%
! GGAAACTAGGATGGGAGTAT+AGG + chr2.1:75794243-75794262 None:intergenic 45.0%
! TTTGAGGTCCTGGTTCAAAC+CGG + chr2.1:75793068-75793087 None:intergenic 45.0%
!! CATTTAAAGAGGGAGCATCC+TGG - chr2.1:75797128-75797147 MS.gene00617:intron 45.0%
!! TCCCGTCATTTTAGCCCTTT+TGG - chr2.1:75792980-75792999 MS.gene00617:intron 45.0%
!! ATATAAAGATAAAAAAAATT+GGG + chr2.1:75795683-75795702 None:intergenic 5.0%
AAGACGTTGTTGCCACTGGT+GGG - chr2.1:75792551-75792570 MS.gene00617:CDS 50.0%
ACATGCATATGGGCGATCAG+AGG + chr2.1:75797057-75797076 None:intergenic 50.0%
ACCTTACCACAGCCTTCATG+AGG + chr2.1:75794555-75794574 None:intergenic 50.0%
AGACAGCGAAGAAACTGAGG+AGG - chr2.1:75797400-75797419 MS.gene00617:intron 50.0%
ATTCCCACATCCATGGAGAG+AGG - chr2.1:75794022-75794041 MS.gene00617:intron 50.0%
CAAGGAGAAGGCCTGCATAT+TGG + chr2.1:75795218-75795237 None:intergenic 50.0%
CAAGGCTCCCGCTGTTAAAT+GGG - chr2.1:75792318-75792337 MS.gene00617:CDS 50.0%
CAATATGCAGGCCTTCTCCT+TGG - chr2.1:75795216-75795235 MS.gene00617:CDS 50.0%
CCTTTCCACACCCCTCATAA+TGG + chr2.1:75794059-75794078 None:intergenic 50.0%
CTCTTCCCACAATCTGGGTA+TGG + chr2.1:75795298-75795317 None:intergenic 50.0%
CTTGTTTGAGCAGCAGGATG+AGG + chr2.1:75793093-75793112 None:intergenic 50.0%
GCGTATCTCTTCCCACAATC+TGG + chr2.1:75795304-75795323 None:intergenic 50.0%
GCTTCAGCAGCAAGGTAATG+AGG - chr2.1:75794773-75794792 MS.gene00617:intron 50.0%
GTGTCTTCATGTGAGACCTC+AGG + chr2.1:75795249-75795268 None:intergenic 50.0%
GTTTGCCATTATGAGGGGTG+TGG - chr2.1:75794051-75794070 MS.gene00617:intron 50.0%
TCCTCATGAAGGCTGTGGTA+AGG - chr2.1:75794551-75794570 MS.gene00617:intron 50.0%
! CCATTATGAGGGGTGTGGAA+AGG - chr2.1:75794056-75794075 MS.gene00617:intron 50.0%
! CGCTGAGCAACTTTAGAAGG+AGG + chr2.1:75797302-75797321 None:intergenic 50.0%
! GCAAGCATTGCACTTCAGAC+AGG + chr2.1:75795841-75795860 None:intergenic 50.0%
! GGGATAAGGCTTGGTTGTGT+TGG - chr2.1:75793552-75793571 MS.gene00617:intron 50.0%
!! AGACCTTCTGGAGCGACATA+CGG - chr2.1:75797023-75797042 MS.gene00617:intron 50.0%
!! AGGAAGCATTCCCACATCCA+TGG - chr2.1:75794015-75794034 MS.gene00617:intron 50.0%
!! GCTCTAAAGCTTCAGCAGCA+AGG - chr2.1:75794765-75794784 MS.gene00617:intron 50.0%
!! TTCTGGAGCGACATACGGTT+CGG - chr2.1:75797028-75797047 MS.gene00617:intron 50.0%
ACTGCCTCTCTCCATGGATG+TGG + chr2.1:75794029-75794048 None:intergenic 55.0%
CAAGACGTTGTTGCCACTGG+TGG - chr2.1:75792550-75792569 MS.gene00617:CDS 55.0%
CAGCATACACTTCCCACCAG+TGG + chr2.1:75792566-75792585 None:intergenic 55.0%
CAGCGAAGAAACTGAGGAGG+AGG - chr2.1:75797403-75797422 MS.gene00617:intron 55.0%
CCAAGGCTCCCGCTGTTAAA+TGG - chr2.1:75792317-75792336 MS.gene00617:CDS 55.0%
CCACAAGACGTTGTTGCCAC+TGG - chr2.1:75792547-75792566 MS.gene00617:CDS 55.0%
CCAGTGGCAACAACGTCTTG+TGG + chr2.1:75792550-75792569 None:intergenic 55.0%
CCATTTAACAGCGGGAGCCT+TGG + chr2.1:75792320-75792339 None:intergenic 55.0%
CCTGGTTCAAACCGGAACGA+AGG + chr2.1:75793060-75793079 None:intergenic 55.0%
CTGCCTCTCTCCATGGATGT+GGG + chr2.1:75794028-75794047 None:intergenic 55.0%
GAACCGTATGTCGCTCCAGA+AGG + chr2.1:75797029-75797048 None:intergenic 55.0%
GAGCCTTGGACGTGAGAAAG+GGG + chr2.1:75792306-75792325 None:intergenic 55.0%
GCAGCAGGATGAGGAGTTTG+AGG + chr2.1:75793084-75793103 None:intergenic 55.0%
GGAGCCTTGGACGTGAGAAA+GGG + chr2.1:75792307-75792326 None:intergenic 55.0%
GGCGTCTCTCAAAGAGAGAG+TGG + chr2.1:75792285-75792304 None:intergenic 55.0%
GTGTGTCCTCATGAAGGCTG+TGG - chr2.1:75794546-75794565 MS.gene00617:intron 55.0%
! CCTTCGTTCCGGTTTGAACC+AGG - chr2.1:75793057-75793076 MS.gene00617:intron 55.0%
! GCCCATCTTGTTTGAGCAGC+AGG + chr2.1:75793099-75793118 None:intergenic 55.0%
! GGATGAGGAGTTTGAGGTCC+TGG + chr2.1:75793078-75793097 None:intergenic 55.0%
!! GGTTCTGGCTCAGGAGCTAA+TGG + chr2.1:75793919-75793938 None:intergenic 55.0%
!! TCAGTAGTTGGCTCGGGTTC+TGG + chr2.1:75793934-75793953 None:intergenic 55.0%
ACGCCCCTTTCTCACGTCCA+AGG - chr2.1:75792300-75792319 MS.gene00617:CDS 60.0%
GGGAGCCTTGGACGTGAGAA+AGG + chr2.1:75792308-75792327 None:intergenic 60.0%
!! GTTGGCTCGGGTTCTGGCTC+AGG + chr2.1:75793928-75793947 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 75792265 75797505 75792265 ID=MS.gene00617
chr2.1 mRNA 75792265 75797505 75792265 ID=MS.gene00617.t1;Parent=MS.gene00617
chr2.1 exon 75797420 75797505 75797420 ID=MS.gene00617.t1.exon1;Parent=MS.gene00617.t1
chr2.1 CDS 75797420 75797505 75797420 ID=cds.MS.gene00617.t1;Parent=MS.gene00617.t1
chr2.1 exon 75797169 75797227 75797169 ID=MS.gene00617.t1.exon2;Parent=MS.gene00617.t1
chr2.1 CDS 75797169 75797227 75797169 ID=cds.MS.gene00617.t1;Parent=MS.gene00617.t1
chr2.1 exon 75795693 75795892 75795693 ID=MS.gene00617.t1.exon3;Parent=MS.gene00617.t1
chr2.1 CDS 75795693 75795892 75795693 ID=cds.MS.gene00617.t1;Parent=MS.gene00617.t1
chr2.1 exon 75795198 75795287 75795198 ID=MS.gene00617.t1.exon4;Parent=MS.gene00617.t1
chr2.1 CDS 75795198 75795287 75795198 ID=cds.MS.gene00617.t1;Parent=MS.gene00617.t1
chr2.1 exon 75794401 75794544 75794401 ID=MS.gene00617.t1.exon5;Parent=MS.gene00617.t1
chr2.1 CDS 75794401 75794544 75794401 ID=cds.MS.gene00617.t1;Parent=MS.gene00617.t1
chr2.1 exon 75792265 75792813 75792265 ID=MS.gene00617.t1.exon6;Parent=MS.gene00617.t1
chr2.1 CDS 75792265 75792813 75792265 ID=cds.MS.gene00617.t1;Parent=MS.gene00617.t1
Gene Sequence

>MS.gene00617

ATGGAGACTCACTACAACCACTCTCTCTTTGAGAGACGCCCCTTTCTCACGTCCAAGGCTCCCGCTGTTAAATGGGTCAAACAATGGTACTGCCCCTTTTCTTCATCAACTCAATTTTGCATTTTTTCCTCAATTTTTAACTCAACTTTGTCCTTGAATGAATTTCTACAGCGAAAATCCAACAAATGAACGAGAAACCAAAAAAAAAAAAATTTGAGATTTTTTTGTTAAAGTTTGTTTGGAATTTAATGTATTAATCATAGCAATGTTATTATCAGGGTTCCACAAGACGTTGTTGCCACTGGTGGGAAGTGTATGCTGTTAAGATGGGTAACAGGTTTGTCCTTTTTTACTGTCAATTGAGCTTAAATTTGAATGAGCTGAATTTGTTTCCAATAAATTAAGCACCCATAATTTTCCCTTTAGGTTATTTGTAATGTTGATTTATCATGGTTCGTATTTCTGTTGCTTATGATTGACCTATCTTTCTGATTAGACATTAGACAATAGACAACATAATTTCATAATGTTCTTCGTATGTAGATCATGTTCTTAATCAAACGATGGTTTATAATTTCCTAACTTTACAAGTATGAATTGGTACATAGCATTCTTCATGATGTTTCATAAAAACTCTACGGCAAAATTACACTTCTGGTCCTTAACTTAATATTAGATAACATTAGATAACGATTTGTTCATTTATCTTTTTTATTCCCGTCATTTTAGCCCTTTTGGCCCATTTGCATTTTTTTTTAATGGAAAATGTTACTAGTTAGATTGGTTTTTTCTCCTTCGTTCCGGTTTGAACCAGGACCTCAAACTCCTCATCCTGCTGCTCAAACAAGATGGGCTACTAACCCCCTTGATCCGTTTGCATATGAATTTTCAAGCTTCAAATCTATGGTTTTATTTTCCTGTGAGTTCTCAGTCTTCAAATCTATGGTCCTTCACCCATGTTTGCACATGAATCTTAGATTTGAAGCTTGAAAATTCATATGCAAAAGGATCAAAAGGGTTAAATTTACCAAAACAAAGTAAAGGAGCAAATTGTTATCTGAAATTAAGAGATCACGGGTGTAATTTTGCCAAACGCTGCATGTATGAATGAATTAATACTGCTGGTGCTGATGTGTCGCTTTAATAAAGTGACTATTGCCATGTCGTACTAGAACAACCTTTCATAGCACACATGAACAGTAAACCCTGACATAACTATCTCAAATACTCACACACCCCCAAAAAAATCTGTTCATAATGCTGCATTTCTAGTCTACCCTACTAAGTGGGATAAGGCTTGGTTGTGTTGGTGGTTGTTGTAATGCTTCATTTCTACGTTGGTTTATAGTTTACAATCTTTAGCATTTTTGTGTTATGTTTCTGTTACCAATTTGCTTTCCAGTTATCTTTCATAACAATCTGCAAACTCATGTATTTCTGAATGGTTTTATTGATGCAAAAAGGAACAAAGCATGTATTTTCACAGTTATAGAGCATTTGATTAGTTGAATGTTAAGCAAGCTTGGTTTGCATCCAAGCAATTATTATATTGTATGTGATTATATTCATCACGTCTTCTATATTAACAATTTTCTGTGTTTTGTTTTCTTTAGAGGATACCATAAATGCCTTGAAAGAAAAGGAAAAAGAACCATTAGCTCCTGAGCCAGAACCCGAGCCAACTACTGAAGTACTTTTTCTTTGTAGCTATGAAGGCTGTGGAAAGACATTTATAGATGCTGGTGCTTTGAGGAAGCATTCCCACATCCATGGAGAGAGGCAGTTTGTTTGCCATTATGAGGGGTGTGGAAAGGTAATGAAACTGTTTCTTCGGATTCACGCACTCACAAGCACAGAAATGCATGTTAGGCTTTAATGTTGTAACATACTTGGTTCATTGTAAATCCTTTAACAATTTTTGTGAAGCTTCATAATAATCATTTTGATTTACATAATAATGCCATGTCTTTACTCACCTATACTCCCATCCTAGTTTCCATTTTTTGTAATTTCAGGTGTATTTAGTAACACACACATGTATGCTGGTTATGTTGTATGGTTGTAACCAATAATTGCTCAAGATAGATCCTTATTAATTTTTCCATCTAGTTTCATAAAAAAGTTTCTGTCTAGCGCTGTGTCTCAATGTACAGCTCTTATGTTTGCCAAATGTCAGGTCTATTTAGAAATTACTAAGAATATTTTGTTTCTGTTGCAGAAATTTCTGGACAGCTCAAAGTTAAAAAGACATTTCTTAATTCATACGGGGGAGAGGGATTTTGTGTGTCCTCATGAAGGCTGTGGTAAGGTGATAAATCGATCCATTGCCCTTGTTTATTGATCTCTTAAGGTTTTCATTTTTTCGTATTTTGAATCACCTTTATGTTTGGCATATTCCATCATACCCTGAATATCAGCAAAAACTCTTCTTTTATTATCGTTCACTCTGAACCTAATTACTGATCTGTTTTTTCCTTCATTGTAATGATCAAATATTTGCGCTCTAAAGCTTCAGCAGCAAGGTAATGAGGTATATGACTATTCAGCAGTGGGTCACTTTGACTGCTGATATAGAAGATGATTAATAGATTTGGGAAATCGTCAGTTTAGAATCAATGTACAATAAATATTGTTTGGTTGATGACTGTACTGTTACTGTAAATCATCGTTTCCATGGTCACTATGGGTTTCGAATAAATGAGTTTTTCTGAATATGATTTTTTTTTTTTTTTAACTTAATAGCCCCATGATTGAATCCGATATGAAGTTAGTTCATGGCTCAATATATATGTAAGATGTATAGACAATGATTCAAACCTTCTTTGTGGTATTATTGTTTAAGGATCTTCTTCAACAAGTCAAAACCTTGCATTTGGAAAAGATAATTTTAGTATCATATTGTCTGGATTCATTTTTAATTATTCATTAGTGACTCTAAGTTTTGTTTGTGCCAATATGCAGGCCTTCTCCTTGGATTTTAACCTGAGGTCTCACATGAAGACACATTCACAAGAGAATTATCATATATGCCCATACCCAGATTGTGGGAAGAGATACGCTCATGAATACAAGCTAAAGAATCACATTGCTTCCCATCATGAAAAGGTTGGTTAATATTTCCTGTTTGTGTAACTGTGATCTATTTATATTCTATTCTAAATGGAGTAAATAGGCAATCACCCCCCCGAAATTGTAAGTTTCGTCAATTACCCCCCTGACATTAACAAAATTTCAATTACCCCCCTGAAATTGCACAACGTTAATCAATTTACCCCCTCTGTCAAATTTTTCCGTTAGTCAACATGACGTTTTGCAAATACCCCCCTGAAGTTTTGCACTTATGTGCAAAATGCCCCCTGAAATTTATAATAATCAAGCAAATTGGTCCTTGTGACAAAAAAAATATTCTTTTGCACCCAATTTTTTTTATCTTTATATGCTAATGATATCTGAATTTTTCGCAAAGGATCAAATAGGAACATCAAATGCATTAAGAAAATCTTTAAACTATATGGTGAAAGTCTTTAGCATGTAAACTTAAGAAAGAATAATTTTTATGCTGGATCTATTAACCCTGTCTGAAGTGCAATGCTTGCTCATGTAATTAGCTTTAACCTGGCTGTTATACCTTTCAAATATTTGGGAGTCCACATTTTGAAAGATAAACCTAAGATCAGTTACTTTAATGATATATGTGATGCAATTAAAGTTAAGCTTGCTACTTGGAAGGGAATTTTTCTGTCTATAATGGGTACAGTTCGACTCATCAAGTTTGTTATTCATGGCATGCTCACATTTTCTTTTTGCAATTACCTATGGCCTGTACATCTTTCGAAGCAACTTGATCAATGGTTTCCAAAATTCATATGAAGTGGATATATTTCAACTTGAATGACTCTGCTATTTTACTTCTTTGTTGGAAGCTTTTAAGTTCTAACAGTGTATTACTGAGAGATTCAAGATAATACTCTAAAGATCATTGCTATTGGTGCAAATATAAGATTTTGGACTAATAATTGGCTTGGGATTGGTGCAAATATAAGATTTTGGACTCATTGTTGCTTATGTTATAATTCTTGAGACTTCCTCACATTTGTTGCTCACTTGTTGATCATAATCATTGGGGATAAGAAAAAAAATATATAAATTTTCAAGTTCGGGGGGCATTTTGCACATAAGTGCAAAACTTCAGGGGGTATTTGCAAAACATTATGTTGACTAACAGAAAAATTTGACGAAGGGGGTAAATTGATTAACGTTGTACAATTTCAGGGGGGTAATTGAAGTTTTATTAATGTCGGGGGGGTAATTGACGAAACTTACAATTTCAAGGGGGTAATTGCCTATTTACTCATTCTAAATGTGTTCACAATCACAATAGATGGTACTACCTGTCTCATGAAGTATGATTTTAATATGTGCACTTGGTTTCCATCTAGAGGTTTCATTTGACGTGCAAAATATATACATATTTTAATACTATTTTGCAAGGTTTCTGATATCTTCGATATCTATAATCTGTTTACAATTTAAATGATGCATGACTGCACTTTTGGATGTAGATGTGCATGAATAATGTGAAGTATCACCTCAAACAATTTTTGATTGAGCACTTTTGGATGTAGATGTGCATGAATAATGTGAAGTATCACCTCAAACAATTTTTGATTGACAGTCTTAACCTCACTGCAGAGTACACCAATAGATGTGCCGATAAAGTATGCAACTCCTCCTTCAGAAAAGCAAACAAAAACTGCTAGACCTTCTGGAGCGACATACGGTTCGGCATCCTCTGATCGCCCATATGCATGTCCTTATGAAGGGTGTGAAAAGGCTTACATTCATGAGTACAAGCTTAAACTGCATTTAAAGAGGGAGCATCCTGGCCACATAAATGATGAAAATGCTATGCATGCTCTGGCTAATAATGCTGAAAATGAAATGGATGAAGCAAGTGATCACGATGCTTATGGTGGAAAACGTTCCAATGGTAAAAGTCAGAAGCAAAGCAGGCCCAAGCCAAACTTGAAAATGCCTCCTTCTAAAGTTGCTCAGCGTAAAGGGTCTACTCCAACCCCTGCCACTTTTAATATGGCTAAAAAACCTTGGCCAGTGAAAGAAGAAACTTACGATGAAGACAGCGAAGAAACTGAGGAGGAGGATCGTGACAATGTTGAAGATGGTTGGAGATATGCTGGAAACAACGAAGATGATGATGAGGAAACAGAATATGAAGACTGA
Protein sequence

>MS.gene00617.t1

METHYNHSLFERRPFLTSKAPAVKWVKQWVPQDVVATGGKCMLLRWVTEDTINALKEKEKEPLAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKSTPIDVPIKYATPPSEKQTKTARPSGATYGSASSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHINDENAMHALANNAENEMDEASDHDAYGGKRSNGKSQKQSRPKPNLKMPPSKVAQRKGSTPTPATFNMAKKPWPVKEETYDEDSEETEEEDRDNVEDGWRYAGNNEDDDEETEYED