AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047200.t1 AT4G06634 68.407 364 99 7 10 361 12 371 6.29e-161 457
MS.gene047200.t1 AT4G06634 65.489 368 96 9 10 361 12 364 1.67e-148 425
MS.gene047200.t1 AT4G06634 65.964 332 97 7 42 361 6 333 6.75e-135 389
MS.gene047200.t1 AT3G48430 27.273 121 80 2 77 195 1243 1357 2.94e-11 65.9
MS.gene047200.t1 AT3G48430 27.273 121 80 2 77 195 884 998 3.76e-11 65.5

Find 94 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAGGCTCCCGCTGTTAAA+TGG 0.155162 2.2:-73419391 MS.gene047200:CDS
TCAGTAGTTGGCTCGGGTTC+TGG 0.253968 2.2:+73417777 None:intergenic
TACTTTATCGGCACATCTAT+TGG 0.312836 2.2:+73414730 None:intergenic
GCGTATCTCTTCCCACAATC+TGG 0.321481 2.2:+73416391 None:intergenic
TTACGCTGAGCAACTTTAGA+AGG 0.345270 2.2:+73414391 None:intergenic
CCTTTCCACACCCCTCATAA+TGG 0.376204 2.2:+73417652 None:intergenic
GCAGTTTGTTTGCCATTATG+AGG 0.386353 2.2:-73417664 MS.gene047200:CDS
CTAAAGTTGCTCAGCGTAAA+GGG 0.392561 2.2:-73414387 MS.gene047200:CDS
ATGCTGTTAAGATGGGTAAC+AGG 0.398286 2.2:-73419128 MS.gene047200:intron
GGAGGAGTTGCATACTTTAT+CGG 0.401475 2.2:+73414718 None:intergenic
CCTTCATAAGGACATGCATA+TGG 0.405323 2.2:+73414628 None:intergenic
CTCTTCCCACAATCTGGGTA+TGG 0.407430 2.2:+73416397 None:intergenic
GGTTCTGGCTCAGGAGCTAA+TGG 0.412849 2.2:+73417792 None:intergenic
GTTGGCTCGGGTTCTGGCTC+AGG 0.414498 2.2:+73417783 None:intergenic
GGGAGCCTTGGACGTGAGAA+AGG 0.426315 2.2:+73419403 None:intergenic
GTTTCTTCTTTCACTGGCCA+AGG 0.432210 2.2:+73414325 None:intergenic
CCATTTAACAGCGGGAGCCT+TGG 0.434294 2.2:+73419391 None:intergenic
CAAGGCTCCCGCTGTTAAAT+GGG 0.434337 2.2:-73419390 MS.gene047200:CDS
AAGACATTTCTTAATTCATA+CGG 0.439731 2.2:-73417184 MS.gene047200:CDS
GCAAGTGATCACGATGCTTA+TGG 0.440454 2.2:-73414478 MS.gene047200:CDS
AGACATTTCTTAATTCATAC+GGG 0.448713 2.2:-73417183 MS.gene047200:CDS
TTATAGATGCTGGTGCTTTG+AGG 0.456478 2.2:-73417713 MS.gene047200:CDS
TCTAAAGTTGCTCAGCGTAA+AGG 0.457185 2.2:-73414388 MS.gene047200:CDS
TCGTAAGTTTCTTCTTTCAC+TGG 0.459248 2.2:+73414319 None:intergenic
CAATATGCAGGCCTTCTCCT+TGG 0.459806 2.2:-73416476 MS.gene047200:intron
CAGTTTGTTTGCCATTATGA+GGG 0.471982 2.2:-73417663 MS.gene047200:CDS
CATAAATGCCTTGAAAGAAA+AGG 0.473578 2.2:-73417823 MS.gene047200:CDS
CATTGCTTCCCATCATGAAA+AGG 0.475165 2.2:-73416344 MS.gene047200:intron
TAATAATGCTGAAAATGAAA+TGG 0.485384 2.2:-73414506 MS.gene047200:CDS
CCACAAGACGTTGTTGCCAC+TGG 0.487699 2.2:-73419161 MS.gene047200:CDS
AGCTTAAACTGCATTTAAAG+AGG 0.494339 2.2:-73414576 MS.gene047200:CDS
ATATTAAAAGTGGCAGGGGT+TGG 0.494716 2.2:+73414358 None:intergenic
TTAGCCATATTAAAAGTGGC+AGG 0.498748 2.2:+73414352 None:intergenic
CCATATGCATGTCCTTATGA+AGG 0.500362 2.2:-73414628 MS.gene047200:CDS
CTTTGTAGCTATGAAGGCTG+TGG 0.501431 2.2:-73417744 MS.gene047200:CDS
TCCTTATGAAGGGTGTGAAA+AGG 0.501607 2.2:-73414617 MS.gene047200:CDS
TGAAAATGCTATGCATGCTC+TGG 0.502807 2.2:-73414530 MS.gene047200:CDS
GGAAGTGTATGCTGTTAAGA+TGG 0.510117 2.2:-73419136 MS.gene047200:CDS
AAGTACTTCAGTAGTTGGCT+CGG 0.511218 2.2:+73417770 None:intergenic
GAAGATGGTTGGAGATATGC+TGG 0.512941 2.2:-73414253 MS.gene047200:CDS
AGGAAGCATTCCCACATCCA+TGG 0.515275 2.2:-73417693 MS.gene047200:CDS
ACTGCCTCTCTCCATGGATG+TGG 0.516577 2.2:+73417682 None:intergenic
GGAGCCTTGGACGTGAGAAA+GGG 0.516870 2.2:+73419404 None:intergenic
CGTATCTCTTCCCACAATCT+GGG 0.520117 2.2:+73416392 None:intergenic
CTTCATAAGGACATGCATAT+GGG 0.522116 2.2:+73414629 None:intergenic
GTAAAAGTCAGAAGCAAAGC+AGG 0.525445 2.2:-73414438 MS.gene047200:CDS
AGTACTTCAGTAGTTGGCTC+GGG 0.526508 2.2:+73417771 None:intergenic
TTCTGGAGCGACATACGGTT+CGG 0.536084 2.2:-73414665 MS.gene047200:CDS
CAGCGAAGAAACTGAGGAGG+AGG 0.538145 2.2:-73414290 MS.gene047200:CDS
AGACCTTCTGGAGCGACATA+CGG 0.541337 2.2:-73414670 MS.gene047200:CDS
GTGTCTTCATGTGAGACCTC+AGG 0.542819 2.2:+73416446 None:intergenic
TCTTCCCACAATCTGGGTAT+GGG 0.550401 2.2:+73416398 None:intergenic
CGCTGAGCAACTTTAGAAGG+AGG 0.554525 2.2:+73414394 None:intergenic
TATGCCCATACCCAGATTGT+GGG 0.558178 2.2:-73416402 MS.gene047200:CDS
CTGTTAAATGGGTCAAACAA+TGG 0.559100 2.2:-73419379 MS.gene047200:intron
GTTTGCCATTATGAGGGGTG+TGG 0.559433 2.2:-73417657 MS.gene047200:CDS
CAAGACGTTGTTGCCACTGG+TGG 0.559549 2.2:-73419158 MS.gene047200:CDS
CCATTATGAGGGGTGTGGAA+AGG 0.561192 2.2:-73417652 MS.gene047200:intron
GTGACAATGTTGAAGATGGT+TGG 0.563304 2.2:-73414264 MS.gene047200:CDS
GCTTAAACTGCATTTAAAGA+GGG 0.566396 2.2:-73414575 MS.gene047200:CDS
AGCCATATTAAAAGTGGCAG+GGG 0.567185 2.2:+73414354 None:intergenic
GTGTGTCCTCATGAAGGCTG+TGG 0.567957 2.2:-73417147 MS.gene047200:CDS
CATTTAAAGAGGGAGCATCC+TGG 0.569801 2.2:-73414565 MS.gene047200:CDS
GGAAAGACATTTATAGATGC+TGG 0.570125 2.2:-73417723 MS.gene047200:CDS
TCCTCATGAAGGCTGTGGTA+AGG 0.574286 2.2:-73417142 MS.gene047200:intron
TGTTTGACCCATTTAACAGC+GGG 0.574962 2.2:+73419383 None:intergenic
AAACAAACTGCCTCTCTCCA+TGG 0.576594 2.2:+73417676 None:intergenic
ACGCCCCTTTCTCACGTCCA+AGG 0.578019 2.2:-73419408 MS.gene047200:CDS
GAAGTGTATGCTGTTAAGAT+GGG 0.578315 2.2:-73419135 MS.gene047200:CDS
ATATGCCCATACCCAGATTG+TGG 0.578913 2.2:-73416403 MS.gene047200:CDS
AGACCTCAGGTTAAAATCCA+AGG 0.579184 2.2:+73416459 None:intergenic
CTGCCTCTCTCCATGGATGT+GGG 0.586666 2.2:+73417683 None:intergenic
TAGCCATATTAAAAGTGGCA+GGG 0.588156 2.2:+73414353 None:intergenic
AGTTTGTTTGCCATTATGAG+GGG 0.589676 2.2:-73417662 MS.gene047200:CDS
CAGGTTAAAATCCAAGGAGA+AGG 0.604105 2.2:+73416465 None:intergenic
GAACCGTATGTCGCTCCAGA+AGG 0.605176 2.2:+73414667 None:intergenic
CATATGCATGTCCTTATGAA+GGG 0.608937 2.2:-73414627 MS.gene047200:CDS
AAACAACGAAGATGATGATG+AGG 0.613095 2.2:-73414230 MS.gene047200:CDS
GAGCCTTGGACGTGAGAAAG+GGG 0.615789 2.2:+73419405 None:intergenic
GATCGTGACAATGTTGAAGA+TGG 0.616587 2.2:-73414268 MS.gene047200:CDS
TATGGTGGAAAACGTTCCAA+TGG 0.620791 2.2:-73414460 MS.gene047200:CDS
ACATGCATATGGGCGATCAG+AGG 0.622960 2.2:+73414639 None:intergenic
AGTGATCACGATGCTTATGG+TGG 0.628298 2.2:-73414475 MS.gene047200:CDS
GGCGTCTCTCAAAGAGAGAG+TGG 0.633941 2.2:+73419426 None:intergenic
ACCTTACCACAGCCTTCATG+AGG 0.637114 2.2:+73417141 None:intergenic
AAGACGTTGTTGCCACTGGT+GGG 0.637791 2.2:-73419157 MS.gene047200:CDS
GACATTTCTTAATTCATACG+GGG 0.654030 2.2:-73417182 MS.gene047200:CDS
CAGCATACACTTCCCACCAG+TGG 0.655133 2.2:+73419145 None:intergenic
CCAGTGGCAACAACGTCTTG+TGG 0.655732 2.2:+73419161 None:intergenic
ATTCCCACATCCATGGAGAG+AGG 0.655979 2.2:-73417686 MS.gene047200:CDS
TGAAGACAGCGAAGAAACTG+AGG 0.661243 2.2:-73414296 MS.gene047200:CDS
AGACAGCGAAGAAACTGAGG+AGG 0.668007 2.2:-73414293 MS.gene047200:CDS
ACATTTCTTAATTCATACGG+GGG 0.674154 2.2:-73417181 MS.gene047200:CDS
TTGTTTGACCCATTTAACAG+CGG 0.696885 2.2:+73419382 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATAAAGATAAAAAAAAT+TGG + chr2.2:73417644-73417663 None:intergenic 10.0%
!! CTTGATTATTATAAATTTAA+GGG + chr2.2:73417582-73417601 None:intergenic 10.0%
!! TATTTATATTCTATTCTAAA+TGG - chr2.2:73417366-73417385 MS.gene047200:intron 10.0%
!! TTGATTATTATAAATTTAAG+GGG + chr2.2:73417581-73417600 None:intergenic 10.0%
!!! ATATATAAATTTTAAAGTTC+GGG - chr2.2:73418363-73418382 MS.gene047200:intron 10.0%
!!! ATCTCAATTTTTTTTTTTTT+TGG + chr2.2:73414410-73414429 None:intergenic 10.0%
!! AAGAAAATCTTTAAACTATA+TGG - chr2.2:73417717-73417736 MS.gene047200:CDS 15.0%
!! AATGTACAATAAATATTGTT+TGG - chr2.2:73416839-73416858 MS.gene047200:intron 15.0%
!! AATTTACCAAAAAAAAGTAA+AGG - chr2.2:73415231-73415250 MS.gene047200:intron 15.0%
!! CATTAAAAAAAAATGCAAAT+GGG + chr2.2:73414951-73414970 None:intergenic 15.0%
!! GCTTGATTATTATAAATTTA+AGG + chr2.2:73417583-73417602 None:intergenic 15.0%
!! TGTTATCTAATATTAAGTTA+AGG + chr2.2:73414872-73414891 None:intergenic 15.0%
!! TTTATAATAATCAAGCAAAT+TGG - chr2.2:73417587-73417606 MS.gene047200:intron 15.0%
!!! TATATAAATTTTAAAGTTCG+GGG - chr2.2:73418364-73418383 MS.gene047200:intron 15.0%
!!! TATTTTAATACTATTTTGCA+AGG - chr2.2:73418694-73418713 MS.gene047200:intron 15.0%
!!! TTTTTTTGTTAAAGTTTGTT+TGG - chr2.2:73414429-73414448 MS.gene047200:CDS 15.0%
!! AACATTACAAATAACCTAAA+GGG + chr2.2:73414631-73414650 None:intergenic 20.0%
!! AAGACATTTCTTAATTCATA+CGG - chr2.2:73416469-73416488 MS.gene047200:CDS 20.0%
!! AATTACAAAAAATGGAAACT+AGG + chr2.2:73416201-73416220 None:intergenic 20.0%
!! ACTAGATGGAAAAATTAATA+AGG + chr2.2:73416315-73416334 None:intergenic 20.0%
!! AGAAGATGATTAATAGATTT+GGG - chr2.2:73416797-73416816 MS.gene047200:intron 20.0%
!! ATATTTGATCATTACAATGA+AGG + chr2.2:73416701-73416720 None:intergenic 20.0%
!! CATACAATATAATAATTGCT+TGG + chr2.2:73415746-73415765 None:intergenic 20.0%
!! CCATTAAAAAAAAATGCAAA+TGG + chr2.2:73414952-73414971 None:intergenic 20.0%
!! GTTATACCTTTCAAATATTT+GGG - chr2.2:73417846-73417865 MS.gene047200:intron 20.0%
!! TAATAATGCTGAAAATGAAA+TGG - chr2.2:73419147-73419166 MS.gene047200:CDS 20.0%
!! TAGAAGATGATTAATAGATT+TGG - chr2.2:73416796-73416815 MS.gene047200:intron 20.0%
!! TGTTATACCTTTCAAATATT+TGG - chr2.2:73417845-73417864 MS.gene047200:intron 20.0%
!!! AACTTTTTTATGAAACTAGA+TGG + chr2.2:73416329-73416348 None:intergenic 20.0%
!!! AATTTTAGTATCATATTGTC+TGG - chr2.2:73417109-73417128 MS.gene047200:intron 20.0%
!!! AGAAAGAATAATTTTTATGC+TGG - chr2.2:73417765-73417784 MS.gene047200:CDS 20.0%
!!! AGAATATTTTTTTTGTCACA+AGG + chr2.2:73417614-73417633 None:intergenic 20.0%
!!! ATATAAATTTTAAAGTTCGG+GGG - chr2.2:73418365-73418384 MS.gene047200:intron 20.0%
!!! ATTAACGTTGTACAATTTTA+GGG - chr2.2:73418476-73418495 MS.gene047200:intron 20.0%
!!! ATTATGAACAGATTTTTTTG+GGG + chr2.2:73415449-73415468 None:intergenic 20.0%
!!! ATTGAAATTTTGTTAATGTC+AGG + chr2.2:73417442-73417461 None:intergenic 20.0%
!!! CATTATGAACAGATTTTTTT+GGG + chr2.2:73415450-73415469 None:intergenic 20.0%
!!! CCATTTGCATTTTTTTTTAA+TGG - chr2.2:73414949-73414968 MS.gene047200:intron 20.0%
!!! TAAGATTTTGGACTAATAAT+TGG - chr2.2:73418222-73418241 MS.gene047200:intron 20.0%
!!! TTGAAATTTTGTTAATGTCA+GGG + chr2.2:73417441-73417460 None:intergenic 20.0%
!!! TTTCCATTTTTTGTAATTTC+AGG - chr2.2:73416203-73416222 MS.gene047200:intron 20.0%
!!! TTTGTAATGTTGATTTATCA+TGG - chr2.2:73414640-73414659 MS.gene047200:CDS 20.0%
!!! TTTTTTAGCCATATTAAAAG+TGG + chr2.2:73419308-73419327 None:intergenic 20.0%
! AAACAATAATACCACAAAGA+AGG + chr2.2:73417045-73417064 None:intergenic 25.0%
! ACACCTGAAATTACAAAAAA+TGG + chr2.2:73416209-73416228 None:intergenic 25.0%
! AGACATTTCTTAATTCATAC+GGG - chr2.2:73416470-73416489 MS.gene047200:intron 25.0%
! AGATTGTTATGAAAGATAAC+TGG + chr2.2:73415611-73415630 None:intergenic 25.0%
! AGCTTCACAAAAATTGTTAA+AGG + chr2.2:73416118-73416137 None:intergenic 25.0%
! ATAACCTAAAGGGAAAATTA+TGG + chr2.2:73414621-73414640 None:intergenic 25.0%
! ATCATAGCAATGTTATTATC+AGG - chr2.2:73414466-73414485 MS.gene047200:CDS 25.0%
! ATTATGGGTGCTTAATTTAT+TGG + chr2.2:73414605-73414624 None:intergenic 25.0%
! ATTGACGAAACTTACAATTT+CGG + chr2.2:73418552-73418533 None:intergenic 25.0%
! CAAAGTTGAGTTAAAAATTG+AGG + chr2.2:73414340-73414359 None:intergenic 25.0%
! CAACATTACAAATAACCTAA+AGG + chr2.2:73414632-73414651 None:intergenic 25.0%
! CAATTCATACTTGTAAAGTT+AGG + chr2.2:73414790-73414809 None:intergenic 25.0%
! CTAACTTTACAAGTATGAAT+TGG - chr2.2:73414788-73414807 MS.gene047200:intron 25.0%
! CTATTCTAAATGGAGTAAAT+AGG - chr2.2:73417376-73417395 MS.gene047200:intron 25.0%
! CTTAAGAGATCAATAAACAA+GGG + chr2.2:73416555-73416574 None:intergenic 25.0%
! CTTGAAAATTCATATGCAAA+AGG - chr2.2:73415195-73415214 MS.gene047200:intron 25.0%
! CTTGAAAATTCATATGCAAA+CGG + chr2.2:73415214-73415195 None:intergenic 25.0%
! CTTTAATGTTGTAACATACT+TGG - chr2.2:73416080-73416099 MS.gene047200:intron 25.0%
! CTTTGTGGTATTATTGTTTA+AGG - chr2.2:73417046-73417065 MS.gene047200:intron 25.0%
! GAAAAAACAGATCAGTAATT+AGG + chr2.2:73416679-73416698 None:intergenic 25.0%
! GAAAATGTTACTAGTTAGAT+TGG - chr2.2:73414971-73414990 MS.gene047200:intron 25.0%
! GATGTTTCATAAAAACTCTA+CGG - chr2.2:73414828-73414847 MS.gene047200:intron 25.0%
! TAACAGAAAAATTTGACGAA+GGG - chr2.2:73418444-73418463 MS.gene047200:intron 25.0%
! TAACCTAAAGGGAAAATTAT+GGG + chr2.2:73414620-73414639 None:intergenic 25.0%
! TAATGTCTAATCAGAAAGAT+AGG + chr2.2:73414692-73414711 None:intergenic 25.0%
! TAGGTTTATCTTTCAAAATG+TGG + chr2.2:73417875-73417894 None:intergenic 25.0%
! TATGAATGAATTAATACTGC+TGG - chr2.2:73415312-73415331 MS.gene047200:intron 25.0%
! TCATAGCAATGTTATTATCA+GGG - chr2.2:73414467-73414486 MS.gene047200:CDS 25.0%
! TCATTAAAGTAACTGATCTT+AGG + chr2.2:73417894-73417913 None:intergenic 25.0%
! TGTCAATCAAAAATTGTTTG+AGG + chr2.2:73418879-73418898 None:intergenic 25.0%
! TTAATATGGCTAAAAAACCT+TGG - chr2.2:73419311-73419330 MS.gene047200:intron 25.0%
! TTTCCAAAATTCATATGAAG+TGG - chr2.2:73418077-73418096 MS.gene047200:intron 25.0%
!! AATTATCTTTTCCAAATGCA+AGG + chr2.2:73417093-73417112 None:intergenic 25.0%
!! ACTTGTTGATCATAATCATT+GGG - chr2.2:73418327-73418346 MS.gene047200:intron 25.0%
!! CACATTTAGAATGAGTAAAT+AGG + chr2.2:73418570-73418589 None:intergenic 25.0%
!! GATTAACGTTGTACAATTTT+AGG - chr2.2:73418475-73418494 MS.gene047200:intron 25.0%
!! GGAATTTTTCTGTCTATAAT+GGG - chr2.2:73417954-73417973 MS.gene047200:intron 25.0%
!! TAGCATTTTCATCATTTATG+TGG + chr2.2:73419114-73419133 None:intergenic 25.0%
!! TATCCACTTCATATGAATTT+TGG + chr2.2:73418083-73418102 None:intergenic 25.0%
!! TATCTGAAATTAAGAGATCA+CGG - chr2.2:73415264-73415283 MS.gene047200:intron 25.0%
!! TATTTGAGATAGTTATGTCA+GGG + chr2.2:73415417-73415436 None:intergenic 25.0%
!! TGAAATTTTGTTAATGTCAG+GGG + chr2.2:73417440-73417459 None:intergenic 25.0%
!! TTAACGTTGTACAATTTTAG+GGG - chr2.2:73418477-73418496 MS.gene047200:intron 25.0%
!! TTCTTTTTCCTTTTCTTTCA+AGG + chr2.2:73415841-73415860 None:intergenic 25.0%
!! TTGGTGCAAATATAAGATTT+TGG - chr2.2:73418210-73418229 MS.gene047200:intron 25.0%
!! TTTCTTTTTGCAATTACCTA+TGG - chr2.2:73418021-73418040 MS.gene047200:intron 25.0%
!! TTTTGAATCACCTTTATGTT+TGG - chr2.2:73416592-73416611 MS.gene047200:intron 25.0%
!!! AAATTGAGTTGATGAAGAAA+AGG + chr2.2:73414307-73414326 None:intergenic 25.0%
!!! AATTGAGTTGATGAAGAAAA+GGG + chr2.2:73414306-73414325 None:intergenic 25.0%
!!! AATTTTTGATTGAGCACTTT+TGG - chr2.2:73418821-73418840 MS.gene047200:intron 25.0%
!!! ATGATTTTAATATGTGCACT+TGG - chr2.2:73418630-73418649 MS.gene047200:intron 25.0%
!!! ATGGTTTTATTGATGCAAAA+AGG - chr2.2:73415651-73415670 MS.gene047200:intron 25.0%
!!! ATTTTCAAGCTTCAAATCTA+TGG - chr2.2:73415094-73415113 MS.gene047200:intron 25.0%
!!! GCATTATGAACAGATTTTTT+TGG + chr2.2:73415451-73415470 None:intergenic 25.0%
!!! TATAAATTTTAAAGTTCGGG+GGG - chr2.2:73418366-73418385 MS.gene047200:intron 25.0%
!!! TTATGAACAGATTTTTTTGG+GGG + chr2.2:73415448-73415467 None:intergenic 25.0%
!!! TTTGCTCCTTTACTTTTTTT+TGG + chr2.2:73415240-73415259 None:intergenic 25.0%
AAAATCATACTTCATGAGAC+AGG + chr2.2:73418618-73418637 None:intergenic 30.0%
AACAGAAAAATTTGACGAAG+GGG - chr2.2:73418445-73418464 MS.gene047200:intron 30.0%
AAGATAACTGGAAAGCAAAT+TGG + chr2.2:73415599-73415618 None:intergenic 30.0%
AATGATTCAAACCTTCTTTG+TGG - chr2.2:73417031-73417050 MS.gene047200:intron 30.0%
ACAAAAAATGGAAACTAGGA+TGG + chr2.2:73416197-73416216 None:intergenic 30.0%
ACATTTCTTAATTCATACGG+GGG - chr2.2:73416472-73416491 MS.gene047200:intron 30.0%
ACGAAACTTACAATTTCAAG+GGG - chr2.2:73418537-73418556 MS.gene047200:intron 30.0%
AGCTCAATTGACAGTAAAAA+AGG + chr2.2:73414556-73414575 None:intergenic 30.0%
AGCTTAAACTGCATTTAAAG+AGG - chr2.2:73419077-73419096 MS.gene047200:intron 30.0%
ATGGAATATGCCAAACATAA+AGG + chr2.2:73416605-73416624 None:intergenic 30.0%
ATTAACGTTGTGCAATTTCA+GGG + chr2.2:73417470-73417489 None:intergenic 30.0%
CAAAAAATGGAAACTAGGAT+GGG + chr2.2:73416196-73416215 None:intergenic 30.0%
CATAAATGCCTTGAAAGAAA+AGG - chr2.2:73415830-73415849 MS.gene047200:intron 30.0%
CATATGCAAAAGGATCAAAA+GGG - chr2.2:73415205-73415224 MS.gene047200:intron 30.0%
CCTTAAGAGATCAATAAACA+AGG + chr2.2:73416556-73416575 None:intergenic 30.0%
CTAACAGAAAAATTTGACGA+AGG - chr2.2:73418443-73418462 MS.gene047200:intron 30.0%
CTTGTTGATCATAATCATTG+GGG - chr2.2:73418328-73418347 MS.gene047200:intron 30.0%
GACATTTCTTAATTCATACG+GGG - chr2.2:73416471-73416490 MS.gene047200:intron 30.0%
GACGAAACTTACAATTTCAA+GGG - chr2.2:73418536-73418555 MS.gene047200:intron 30.0%
GATCTATCTTGAGCAATTAT+TGG + chr2.2:73416293-73416312 None:intergenic 30.0%
GCTCAATCAAAAATTGTTTG+AGG + chr2.2:73418816-73418835 None:intergenic 30.0%
GCTTAAACTGCATTTAAAGA+GGG - chr2.2:73419078-73419097 MS.gene047200:intron 30.0%
TAACGGAAAAATTTGACAGA+GGG + chr2.2:73417502-73417521 None:intergenic 30.0%
TAAGATTCATGTGCAAACAT+GGG + chr2.2:73415166-73415185 None:intergenic 30.0%
TCATATGCAAAAGGATCAAA+AGG - chr2.2:73415204-73415223 MS.gene047200:intron 30.0%
TCATGTTCTTAATCAAACGA+TGG - chr2.2:73414754-73414773 MS.gene047200:intron 30.0%
TGACGAAACTTACAATTTCA+AGG - chr2.2:73418535-73418554 MS.gene047200:intron 30.0%
TTCATATCGGATTCAATCAT+GGG + chr2.2:73416972-73416991 None:intergenic 30.0%
TTCTAAATAGACCTGACATT+TGG + chr2.2:73416393-73416412 None:intergenic 30.0%
TTGACGAAACTTACAATTTC+GGG + chr2.2:73418553-73418534 None:intergenic 30.0%
! AAATTTTGTTAATGTCAGGG+GGG + chr2.2:73417438-73417457 None:intergenic 30.0%
! AAGAGTTTTTGCTGATATTC+AGG + chr2.2:73416633-73416652 None:intergenic 30.0%
! ACTCTAAAGATCATTGCTAT+TGG - chr2.2:73418191-73418210 MS.gene047200:intron 30.0%
! AGAGTTTTTGCTGATATTCA+GGG + chr2.2:73416632-73416651 None:intergenic 30.0%
! AGGTAATGAAACTGTTTCTT+CGG - chr2.2:73416021-73416040 MS.gene047200:intron 30.0%
! ATCTGAAATTAAGAGATCAC+GGG - chr2.2:73415265-73415284 MS.gene047200:intron 30.0%
! ATTAACCAACCTTTTCATGA+TGG + chr2.2:73417321-73417340 None:intergenic 30.0%
! ATTTCAGGTGTTGTAATTTC+AGG - chr2.2:73416218-73416237 MS.gene047200:intron 30.0%
! CAAACTCATGTATTTCTGAA+TGG - chr2.2:73415632-73415651 MS.gene047200:intron 30.0%
! CACTTGTTGATCATAATCAT+TGG - chr2.2:73418326-73418345 MS.gene047200:intron 30.0%
! CCTTGTTTATTGATCTCTTA+AGG - chr2.2:73416553-73416572 MS.gene047200:intron 30.0%
! CTTTTTCTTTGTAGCTATGA+AGG - chr2.2:73415903-73415922 MS.gene047200:intron 30.0%
! GAAATTTTGTTAATGTCAGG+GGG + chr2.2:73417439-73417458 None:intergenic 30.0%
! GATATCTGAATTTTTCGCAA+AGG - chr2.2:73417669-73417688 MS.gene047200:CDS 30.0%
! GGGAATTTTTCTGTCTATAA+TGG - chr2.2:73417953-73417972 MS.gene047200:intron 30.0%
! GTATTTGAGATAGTTATGTC+AGG + chr2.2:73415418-73415437 None:intergenic 30.0%
! GTTTTTGTTGCAGAAATTTC+TGG - chr2.2:73416430-73416449 MS.gene047200:CDS 30.0%
! TAACGTTGTACAATTTTAGG+GGG - chr2.2:73418478-73418497 MS.gene047200:intron 30.0%
! TTAACCAACCTTTTCATGAT+GGG + chr2.2:73417320-73417339 None:intergenic 30.0%
! TTTGGACTAATAATTGGCTT+GGG - chr2.2:73418228-73418247 MS.gene047200:intron 30.0%
! TTTTGGACTAATAATTGGCT+TGG - chr2.2:73418227-73418246 MS.gene047200:intron 30.0%
! TTTTTCGCAAAGGATCAAAT+AGG - chr2.2:73417679-73417698 MS.gene047200:CDS 30.0%
!! AGAAAAAGTACTTCAGTAGT+TGG + chr2.2:73415891-73415910 None:intergenic 30.0%
!! ATTGAGTTGATGAAGAAAAG+GGG + chr2.2:73414305-73414324 None:intergenic 30.0%
!! CTCATCAAGTTTGTTATTCA+TGG - chr2.2:73417987-73418006 MS.gene047200:intron 30.0%
!! CTTTTCTTTCAAGGCATTTA+TGG + chr2.2:73415832-73415851 None:intergenic 30.0%
!! GTTTTTGTTTGCTTTTCTGA+AGG + chr2.2:73418959-73418978 None:intergenic 30.0%
!! TCATGTAATTAGCTTTAACC+TGG - chr2.2:73417821-73417840 MS.gene047200:CDS 30.0%
!! TTAAAGTTAAGCTTGCTACT+TGG - chr2.2:73417928-73417947 MS.gene047200:intron 30.0%
!!! CTGCTATTTTACTTCTTTGT+TGG - chr2.2:73418122-73418141 MS.gene047200:intron 30.0%
!!! CTGTGTTTTGTTTTCTTTAG+AGG - chr2.2:73415803-73415822 MS.gene047200:intron 30.0%
AAAAATGCAAATGGGCCAAA+AGG + chr2.2:73414943-73414962 None:intergenic 35.0%
AAAATGCAAATGGGCCAAAA+GGG + chr2.2:73414942-73414961 None:intergenic 35.0%
AACGGAAAAATTTGACAGAG+GGG + chr2.2:73417501-73417520 None:intergenic 35.0%
ACAAGTCAAAACCTTGCATT+TGG - chr2.2:73417079-73417098 MS.gene047200:intron 35.0%
ACAGAAAAATTTGACGAAGG+GGG - chr2.2:73418446-73418465 MS.gene047200:intron 35.0%
ACATAAGTGCAAAACTTCAG+GGG - chr2.2:73418397-73418416 MS.gene047200:intron 35.0%
AGATCAATAAACAAGGGCAA+TGG + chr2.2:73416549-73416568 None:intergenic 35.0%
AGTATAGGTGAGTAAAGACA+TGG + chr2.2:73416173-73416192 None:intergenic 35.0%
AGTTGAATGTTAAGCAAGCT+TGG - chr2.2:73415713-73415732 MS.gene047200:intron 35.0%
ATTCATATGCAAACGGATCA+AGG + chr2.2:73415076-73415095 None:intergenic 35.0%
CACATAAGTGCAAAACTTCA+GGG - chr2.2:73418396-73418415 MS.gene047200:intron 35.0%
CATATGCATGTCCTTATGAA+GGG - chr2.2:73419026-73419045 MS.gene047200:intron 35.0%
CGAAACTTACAATTTCAAGG+GGG - chr2.2:73418538-73418557 MS.gene047200:intron 35.0%
CTAACGGAAAAATTTGACAG+AGG + chr2.2:73417503-73417522 None:intergenic 35.0%
CTAAGATTCATGTGCAAACA+TGG + chr2.2:73415167-73415186 None:intergenic 35.0%
CTGTTAAATGGGTCAAACAA+TGG - chr2.2:73414274-73414293 MS.gene047200:CDS 35.0%
CTTCATAAGGACATGCATAT+GGG + chr2.2:73419027-73419046 None:intergenic 35.0%
CTTCATATCGGATTCAATCA+TGG + chr2.2:73416973-73416992 None:intergenic 35.0%
GAAGTGTATGCTGTTAAGAT+GGG - chr2.2:73414518-73414537 MS.gene047200:CDS 35.0%
GATTAACGTTGTGCAATTTC+AGG + chr2.2:73417471-73417490 None:intergenic 35.0%
GCCATGAACTAACTTCATAT+CGG + chr2.2:73416985-73417004 None:intergenic 35.0%
GGAAAGACATTTATAGATGC+TGG - chr2.2:73415930-73415949 MS.gene047200:intron 35.0%
GTAATGCTTCATTTCTACGT+TGG - chr2.2:73415528-73415547 MS.gene047200:intron 35.0%
GTATATGACTATTCAGCAGT+GGG - chr2.2:73416755-73416774 MS.gene047200:intron 35.0%
GTGTTCACAATCACAATAGA+TGG - chr2.2:73418587-73418606 MS.gene047200:intron 35.0%
GTTCTCAGTCTTCAAATCTA+TGG - chr2.2:73415133-73415152 MS.gene047200:intron 35.0%
TACTTTATCGGCACATCTAT+TGG + chr2.2:73418926-73418945 None:intergenic 35.0%
TAGATCACAGTTACACAAAC+AGG + chr2.2:73417348-73417367 None:intergenic 35.0%
TAGCCATATTAAAAGTGGCA+GGG + chr2.2:73419303-73419322 None:intergenic 35.0%
TCATATCGGATTCAATCATG+GGG + chr2.2:73416971-73416990 None:intergenic 35.0%
TCCGATATGAAGTTAGTTCA+TGG - chr2.2:73416981-73417000 MS.gene047200:intron 35.0%
TCGCTGTAGAAATTCATTCA+AGG + chr2.2:73414364-73414383 None:intergenic 35.0%
TCGTAAGTTTCTTCTTTCAC+TGG + chr2.2:73419337-73419356 None:intergenic 35.0%
TCTTATGTTTGCCAAATGTC+AGG - chr2.2:73416379-73416398 MS.gene047200:CDS 35.0%
TGACGAAACTTACAATTTCG+GGG + chr2.2:73417411-73417430 None:intergenic 35.0%
TGGACTCCCAAATATTTGAA+AGG + chr2.2:73417855-73417874 None:intergenic 35.0%
TTAACGTTGTGCAATTTCAG+GGG + chr2.2:73417469-73417488 None:intergenic 35.0%
TTAGCCATATTAAAAGTGGC+AGG + chr2.2:73419304-73419323 None:intergenic 35.0%
TTCATATGCAAACGGATCAA+GGG + chr2.2:73415075-73415094 None:intergenic 35.0%
TTGGTTTCTCGTTCATTTGT+TGG + chr2.2:73414391-73414410 None:intergenic 35.0%
TTGTTTGACCCATTTAACAG+CGG + chr2.2:73414274-73414293 None:intergenic 35.0%
TTTCGAAGCAACTTGATCAA+TGG - chr2.2:73418054-73418073 MS.gene047200:intron 35.0%
! AAACAACGAAGATGATGATG+AGG - chr2.2:73419423-73419442 MS.gene047200:CDS 35.0%
! AGTTTGTTTGCCATTATGAG+GGG - chr2.2:73415991-73416010 MS.gene047200:intron 35.0%
! ATTTGAAAGGTATAACAGCC+AGG + chr2.2:73417842-73417861 None:intergenic 35.0%
! CAAAACGTCATGTTGACTAA+CGG + chr2.2:73417519-73417538 None:intergenic 35.0%
! CAGTTTGTTTGCCATTATGA+GGG - chr2.2:73415990-73416009 MS.gene047200:intron 35.0%
! TGTATGCTGGTTATGTTGTA+TGG - chr2.2:73416261-73416280 MS.gene047200:intron 35.0%
! TTGCTTCTGACTTTTACCAT+TGG + chr2.2:73419212-73419231 None:intergenic 35.0%
! TTTTCATCATTTATGTGGCC+AGG + chr2.2:73419109-73419128 None:intergenic 35.0%
!! AACGTTGTACAATTTTAGGG+GGG - chr2.2:73418479-73418498 MS.gene047200:intron 35.0%
!! ACTAATAATTGGCTTGGGAT+TGG - chr2.2:73418233-73418252 MS.gene047200:intron 35.0%
!! TTTGTTTGCTTTTCTGAAGG+AGG + chr2.2:73418956-73418975 None:intergenic 35.0%
!! TTTTGTTTGTGCCAATATGC+AGG - chr2.2:73417165-73417184 MS.gene047200:CDS 35.0%
AAGGTTGTTCTAGTACGACA+TGG + chr2.2:73415371-73415390 None:intergenic 40.0%
AAGTACTTCAGTAGTTGGCT+CGG + chr2.2:73415886-73415905 None:intergenic 40.0%
ACAAAAACTGCTAGACCTTC+TGG - chr2.2:73418971-73418990 MS.gene047200:intron 40.0%
ACAAGTGAGCAACAAATGTG+AGG + chr2.2:73418313-73418332 None:intergenic 40.0%
ACATAAGCGCAAAACTTCAG+GGG + chr2.2:73417550-73417569 None:intergenic 40.0%
ACGAAACTTACAATTTCGGG+GGG + chr2.2:73417409-73417428 None:intergenic 40.0%
ACGGAAAAATTTGACAGAGG+GGG + chr2.2:73417500-73417519 None:intergenic 40.0%
ACTGTAAATCACCGTTTCCA+TGG - chr2.2:73416879-73416898 MS.gene047200:intron 40.0%
AGACCTCAGGTTAAAATCCA+AGG + chr2.2:73417197-73417216 None:intergenic 40.0%
AGCCATATTAAAAGTGGCAG+GGG + chr2.2:73419302-73419321 None:intergenic 40.0%
AGTAACACACACATGTATGC+TGG - chr2.2:73416248-73416267 MS.gene047200:intron 40.0%
AGTTGCTTCGAAAGATGTAC+AGG + chr2.2:73418047-73418066 None:intergenic 40.0%
ATATTAAAAGTGGCAGGGGT+TGG + chr2.2:73419298-73419317 None:intergenic 40.0%
ATGCTGTTAAGATGGGTAAC+AGG - chr2.2:73414525-73414544 MS.gene047200:CDS 40.0%
CAAGCACAGAAATGCATGTT+AGG - chr2.2:73416057-73416076 MS.gene047200:intron 40.0%
CACATAAGCGCAAAACTTCA+GGG + chr2.2:73417551-73417570 None:intergenic 40.0%
CAGGTTAAAATCCAAGGAGA+AGG + chr2.2:73417191-73417210 None:intergenic 40.0%
CATAAGTGCAAAACTTCAGG+GGG - chr2.2:73418398-73418417 MS.gene047200:intron 40.0%
CATTGCTTCCCATCATGAAA+AGG - chr2.2:73417309-73417328 MS.gene047200:intron 40.0%
CCATATGCATGTCCTTATGA+AGG - chr2.2:73419025-73419044 MS.gene047200:intron 40.0%
CCTTCATAAGGACATGCATA+TGG + chr2.2:73419028-73419047 None:intergenic 40.0%
CGTCAAATGAAACCTCTAGA+TGG + chr2.2:73418659-73418678 None:intergenic 40.0%
CTAAAGTTGCTCAGCGTAAA+GGG - chr2.2:73419266-73419285 MS.gene047200:intron 40.0%
CTACGGCAAAATTACACTTC+TGG - chr2.2:73414845-73414864 MS.gene047200:intron 40.0%
CTGTTCATGTGTGCTATGAA+AGG + chr2.2:73415390-73415409 None:intergenic 40.0%
GACGAAACTTACAATTTCGG+GGG + chr2.2:73417410-73417429 None:intergenic 40.0%
GATCGTGACAATGTTGAAGA+TGG - chr2.2:73419385-73419404 MS.gene047200:CDS 40.0%
GCACATAAGTGCAAAACTTC+AGG - chr2.2:73418395-73418414 MS.gene047200:intron 40.0%
GGAGGAGTTGCATACTTTAT+CGG + chr2.2:73418938-73418957 None:intergenic 40.0%
GGTATATGACTATTCAGCAG+TGG - chr2.2:73416754-73416773 MS.gene047200:intron 40.0%
GTAAAAGTCAGAAGCAAAGC+AGG - chr2.2:73419215-73419234 MS.gene047200:intron 40.0%
GTGACAATGTTGAAGATGGT+TGG - chr2.2:73419389-73419408 MS.gene047200:CDS 40.0%
TAACGTTGTGCAATTTCAGG+GGG + chr2.2:73417468-73417487 None:intergenic 40.0%
TCATATGCAAACGGATCAAG+GGG + chr2.2:73415074-73415093 None:intergenic 40.0%
TCATTCATACATGCAGCGTT+TGG + chr2.2:73415301-73415320 None:intergenic 40.0%
TCTAGTCTACCCTACTAAGT+GGG - chr2.2:73415477-73415496 MS.gene047200:intron 40.0%
TGAAAATGCTATGCATGCTC+TGG - chr2.2:73419123-73419142 MS.gene047200:intron 40.0%
TGCTGATATTCAGGGTATGA+TGG + chr2.2:73416624-73416643 None:intergenic 40.0%
TGTTTGACCCATTTAACAGC+GGG + chr2.2:73414273-73414292 None:intergenic 40.0%
TTACGCTGAGCAACTTTAGA+AGG + chr2.2:73419265-73419284 None:intergenic 40.0%
TTATAGATGCTGGTGCTTTG+AGG - chr2.2:73415940-73415959 MS.gene047200:intron 40.0%
TTCTAGTCTACCCTACTAAG+TGG - chr2.2:73415476-73415495 MS.gene047200:intron 40.0%
TTTGAAGACTGAGAACTCAC+AGG + chr2.2:73415129-73415148 None:intergenic 40.0%
! AAGCCTTATCCCACTTAGTA+GGG + chr2.2:73415489-73415508 None:intergenic 40.0%
! ATGATGCATGACTGCACTTT+TGG - chr2.2:73418758-73418777 MS.gene047200:intron 40.0%
! GATTTTGTGTGTCCTCATGA+AGG - chr2.2:73416500-73416519 MS.gene047200:intron 40.0%
! GCACCCATAATTTTCCCTTT+AGG - chr2.2:73414614-73414633 MS.gene047200:CDS 40.0%
! GCAGTTTGTTTGCCATTATG+AGG - chr2.2:73415989-73416008 MS.gene047200:intron 40.0%
! GGAAGTGTATGCTGTTAAGA+TGG - chr2.2:73414517-73414536 MS.gene047200:CDS 40.0%
! TATGGTGGAAAACGTTCCAA+TGG - chr2.2:73419193-73419212 MS.gene047200:intron 40.0%
! TCCTTATGAAGGGTGTGAAA+AGG - chr2.2:73419036-73419055 MS.gene047200:intron 40.0%
! TCTAAAGTTGCTCAGCGTAA+AGG - chr2.2:73419265-73419284 MS.gene047200:intron 40.0%
!! AGTTAAGCTTGCTACTTGGA+AGG - chr2.2:73417932-73417951 MS.gene047200:intron 40.0%
!! GTTAAGCTTGCTACTTGGAA+GGG - chr2.2:73417933-73417952 MS.gene047200:intron 40.0%
!! TCTCCTTGGATTTTAACCTG+AGG - chr2.2:73417191-73417210 MS.gene047200:CDS 40.0%
!!! AACCCCTGCCACTTTTAATA+TGG - chr2.2:73419297-73419316 MS.gene047200:intron 40.0%
!!! AGGCATTTTCAAGTTTGGCT+TGG + chr2.2:73419242-73419261 None:intergenic 40.0%
!!! GAAGGAGGCATTTTCAAGTT+TGG + chr2.2:73419247-73419266 None:intergenic 40.0%
!!! GGCATTTTCAAGTTTGGCTT+GGG + chr2.2:73419241-73419260 None:intergenic 40.0%
!!! TGGTTTTTTCTCCTTCGTTC+CGG - chr2.2:73414991-73415010 MS.gene047200:intron 40.0%
AAACAAACTGCCTCTCTCCA+TGG + chr2.2:73415980-73415999 None:intergenic 45.0%
AACGTTGTGCAATTTCAGGG+GGG + chr2.2:73417467-73417486 None:intergenic 45.0%
ACCCATAGTGACCATGGAAA+CGG + chr2.2:73416893-73416912 None:intergenic 45.0%
ACCGTTTCCATGGTCACTAT+GGG - chr2.2:73416889-73416908 MS.gene047200:intron 45.0%
AGTGATCACGATGCTTATGG+TGG - chr2.2:73419178-73419197 MS.gene047200:intron 45.0%
ATAAGCGCAAAACTTCAGGG+GGG + chr2.2:73417548-73417567 None:intergenic 45.0%
ATATGCCCATACCCAGATTG+TGG - chr2.2:73417250-73417269 MS.gene047200:intron 45.0%
ATCCTGCTGCTCAAACAAGA+TGG - chr2.2:73415039-73415058 MS.gene047200:intron 45.0%
CATAAGCGCAAAACTTCAGG+GGG + chr2.2:73417549-73417568 None:intergenic 45.0%
CATATGCAAACGGATCAAGG+GGG + chr2.2:73415073-73415092 None:intergenic 45.0%
CGAAACTTACAATTTCGGGG+GGG + chr2.2:73417408-73417427 None:intergenic 45.0%
CGTATCTCTTCCCACAATCT+GGG + chr2.2:73417264-73417283 None:intergenic 45.0%
CTACCCTACTAAGTGGGATA+AGG - chr2.2:73415483-73415502 MS.gene047200:intron 45.0%
CTACTAAGTGGGATAAGGCT+TGG - chr2.2:73415488-73415507 MS.gene047200:intron 45.0%
CTTAATTCATACGGGGGAGA+GGG - chr2.2:73416478-73416497 MS.gene047200:intron 45.0%
CTTTGTAGCTATGAAGGCTG+TGG - chr2.2:73415909-73415928 MS.gene047200:intron 45.0%
GAAGATGGTTGGAGATATGC+TGG - chr2.2:73419400-73419419 MS.gene047200:CDS 45.0%
GCAAGTGATCACGATGCTTA+TGG - chr2.2:73419175-73419194 MS.gene047200:intron 45.0%
GCACATAAGCGCAAAACTTC+AGG + chr2.2:73417552-73417571 None:intergenic 45.0%
GCCAAAAGGGCTAAATTGAC+GGG + chr2.2:73414929-73414948 None:intergenic 45.0%
GCTTCCCATCATGAAAAGGT+TGG - chr2.2:73417313-73417332 MS.gene047200:intron 45.0%
GGCCAAAAGGGCTAAATTGA+CGG + chr2.2:73414930-73414949 None:intergenic 45.0%
GTTTCTTCTTTCACTGGCCA+AGG + chr2.2:73419331-73419350 None:intergenic 45.0%
TATGCCCATACCCAGATTGT+GGG - chr2.2:73417251-73417270 MS.gene047200:intron 45.0%
TATTGGTGTACTCTGCAGTG+AGG + chr2.2:73418909-73418928 None:intergenic 45.0%
TCATGTGCAAACATGGGTGA+AGG + chr2.2:73415160-73415179 None:intergenic 45.0%
TCCTGCTGCTCAAACAAGAT+GGG - chr2.2:73415040-73415059 MS.gene047200:intron 45.0%
TCGAAAGATGTACAGGCCAT+AGG + chr2.2:73418040-73418059 None:intergenic 45.0%
TCTTAATTCATACGGGGGAG+AGG - chr2.2:73416477-73416496 MS.gene047200:intron 45.0%
TCTTCCCACAATCTGGGTAT+GGG + chr2.2:73417258-73417277 None:intergenic 45.0%
TGAAGACAGCGAAGAAACTG+AGG - chr2.2:73419357-73419376 MS.gene047200:intron 45.0%
TGCACTTGGTTTCCATCTAG+AGG - chr2.2:73418644-73418663 MS.gene047200:intron 45.0%
TTCGAAACCCATAGTGACCA+TGG + chr2.2:73416899-73416918 None:intergenic 45.0%
! AGTACTTCAGTAGTTGGCTC+GGG + chr2.2:73415885-73415904 None:intergenic 45.0%
! ATAAGGCTTGGTTGTGTTGG+TGG - chr2.2:73415500-73415519 MS.gene047200:intron 45.0%
! CAAGCATTGCACTTCAGACA+GGG + chr2.2:73417800-73417819 None:intergenic 45.0%
! CAAGCCTTATCCCACTTAGT+AGG + chr2.2:73415490-73415509 None:intergenic 45.0%
! GCCTTTTCACACCCTTCATA+AGG + chr2.2:73419040-73419059 None:intergenic 45.0%
! GGAAACTAGGATGGGAGTAT+AGG + chr2.2:73416188-73416207 None:intergenic 45.0%
! TCCCGTCAATTTAGCCCTTT+TGG - chr2.2:73414925-73414944 MS.gene047200:intron 45.0%
! TTTGAGGTCCTGGTTCAAAC+CGG + chr2.2:73415013-73415032 None:intergenic 45.0%
!! CATTTAAAGAGGGAGCATCC+TGG - chr2.2:73419088-73419107 MS.gene047200:intron 45.0%
!! ATATAAAGATAAAAAAAATT+GGG + chr2.2:73417643-73417662 None:intergenic 5.0%
!!! AATATATAAATTTTAAAGTT+CGG - chr2.2:73418362-73418381 MS.gene047200:intron 5.0%
AAGACGTTGTTGCCACTGGT+GGG - chr2.2:73414496-73414515 MS.gene047200:CDS 50.0%
ACATGCATATGGGCGATCAG+AGG + chr2.2:73419017-73419036 None:intergenic 50.0%
ACCTTACCACAGCCTTCATG+AGG + chr2.2:73416515-73416534 None:intergenic 50.0%
AGACAGCGAAGAAACTGAGG+AGG - chr2.2:73419360-73419379 MS.gene047200:intron 50.0%
ATTCCCACATCCATGGAGAG+AGG - chr2.2:73415967-73415986 MS.gene047200:intron 50.0%
CAAGGAGAAGGCCTGCATAT+TGG + chr2.2:73417179-73417198 None:intergenic 50.0%
CAAGGCTCCCGCTGTTAAAT+GGG - chr2.2:73414263-73414282 MS.gene047200:CDS 50.0%
CAATATGCAGGCCTTCTCCT+TGG - chr2.2:73417177-73417196 MS.gene047200:CDS 50.0%
CACCGTTTCCATGGTCACTA+TGG - chr2.2:73416888-73416907 MS.gene047200:intron 50.0%
CCTTTCCACACCCCTCATAA+TGG + chr2.2:73416004-73416023 None:intergenic 50.0%
CTCTTCCCACAATCTGGGTA+TGG + chr2.2:73417259-73417278 None:intergenic 50.0%
CTTGTTTGAGCAGCAGGATG+AGG + chr2.2:73415038-73415057 None:intergenic 50.0%
GCGTATCTCTTCCCACAATC+TGG + chr2.2:73417265-73417284 None:intergenic 50.0%
GCTTCAGCAGCAAGGTAATG+AGG - chr2.2:73416733-73416752 MS.gene047200:intron 50.0%
GTGTCTTCATGTGAGACCTC+AGG + chr2.2:73417210-73417229 None:intergenic 50.0%
GTTTGCCATTATGAGGGGTG+TGG - chr2.2:73415996-73416015 MS.gene047200:intron 50.0%
TCCTCATGAAGGCTGTGGTA+AGG - chr2.2:73416511-73416530 MS.gene047200:intron 50.0%
! CCATTATGAGGGGTGTGGAA+AGG - chr2.2:73416001-73416020 MS.gene047200:intron 50.0%
! CGCTGAGCAACTTTAGAAGG+AGG + chr2.2:73419262-73419281 None:intergenic 50.0%
! GCAAGCATTGCACTTCAGAC+AGG + chr2.2:73417801-73417820 None:intergenic 50.0%
! GGGATAAGGCTTGGTTGTGT+TGG - chr2.2:73415497-73415516 MS.gene047200:intron 50.0%
! TCCCATCTTGTTTGAGCAGC+AGG + chr2.2:73415044-73415063 None:intergenic 50.0%
!! AGACCTTCTGGAGCGACATA+CGG - chr2.2:73418983-73419002 MS.gene047200:intron 50.0%
!! AGGAAGCATTCCCACATCCA+TGG - chr2.2:73415960-73415979 MS.gene047200:intron 50.0%
!! GCTCTAAAGCTTCAGCAGCA+AGG - chr2.2:73416725-73416744 MS.gene047200:intron 50.0%
!! TTCTGGAGCGACATACGGTT+CGG - chr2.2:73418988-73419007 MS.gene047200:intron 50.0%
ACTGCCTCTCTCCATGGATG+TGG + chr2.2:73415974-73415993 None:intergenic 55.0%
CAAGACGTTGTTGCCACTGG+TGG - chr2.2:73414495-73414514 MS.gene047200:CDS 55.0%
CAGCATACACTTCCCACCAG+TGG + chr2.2:73414511-73414530 None:intergenic 55.0%
CAGCGAAGAAACTGAGGAGG+AGG - chr2.2:73419363-73419382 MS.gene047200:intron 55.0%
CCAAGGCTCCCGCTGTTAAA+TGG - chr2.2:73414262-73414281 MS.gene047200:CDS 55.0%
CCACAAGACGTTGTTGCCAC+TGG - chr2.2:73414492-73414511 MS.gene047200:CDS 55.0%
CCAGTGGCAACAACGTCTTG+TGG + chr2.2:73414495-73414514 None:intergenic 55.0%
CCATTTAACAGCGGGAGCCT+TGG + chr2.2:73414265-73414284 None:intergenic 55.0%
CCTGGTTCAAACCGGAACGA+AGG + chr2.2:73415005-73415024 None:intergenic 55.0%
CTGCCTCTCTCCATGGATGT+GGG + chr2.2:73415973-73415992 None:intergenic 55.0%
GAACCGTATGTCGCTCCAGA+AGG + chr2.2:73418989-73419008 None:intergenic 55.0%
GAGCCTTGGACGTGAGAAAG+GGG + chr2.2:73414251-73414270 None:intergenic 55.0%
GCAGCAGGATGAGGAGTTTG+AGG + chr2.2:73415029-73415048 None:intergenic 55.0%
GGAGCCTTGGACGTGAGAAA+GGG + chr2.2:73414252-73414271 None:intergenic 55.0%
GGCGTCTCTCAAAGAGAGAG+TGG + chr2.2:73414230-73414249 None:intergenic 55.0%
GTGTGTCCTCATGAAGGCTG+TGG - chr2.2:73416506-73416525 MS.gene047200:intron 55.0%
! CCTTCGTTCCGGTTTGAACC+AGG - chr2.2:73415002-73415021 MS.gene047200:intron 55.0%
! GGATGAGGAGTTTGAGGTCC+TGG + chr2.2:73415023-73415042 None:intergenic 55.0%
!! GGTTCTGGCTCAGGAGCTAA+TGG + chr2.2:73415864-73415883 None:intergenic 55.0%
!! TCAGTAGTTGGCTCGGGTTC+TGG + chr2.2:73415879-73415898 None:intergenic 55.0%
ACGCCCCTTTCTCACGTCCA+AGG - chr2.2:73414245-73414264 MS.gene047200:CDS 60.0%
GGGAGCCTTGGACGTGAGAA+AGG + chr2.2:73414253-73414272 None:intergenic 60.0%
!! GTTGGCTCGGGTTCTGGCTC+AGG + chr2.2:73415873-73415892 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 73414210 73419465 73414210 ID=MS.gene047200
chr2.2 mRNA 73414210 73419465 73414210 ID=MS.gene047200.t1;Parent=MS.gene047200
chr2.2 exon 73419380 73419465 73419380 ID=MS.gene047200.t1.exon1;Parent=MS.gene047200.t1
chr2.2 CDS 73419380 73419465 73419380 ID=cds.MS.gene047200.t1;Parent=MS.gene047200.t1
chr2.2 exon 73419129 73419187 73419129 ID=MS.gene047200.t1.exon2;Parent=MS.gene047200.t1
chr2.2 CDS 73419129 73419187 73419129 ID=cds.MS.gene047200.t1;Parent=MS.gene047200.t1
chr2.2 exon 73417653 73417852 73417653 ID=MS.gene047200.t1.exon3;Parent=MS.gene047200.t1
chr2.2 CDS 73417653 73417852 73417653 ID=cds.MS.gene047200.t1;Parent=MS.gene047200.t1
chr2.2 exon 73417143 73417232 73417143 ID=MS.gene047200.t1.exon4;Parent=MS.gene047200.t1
chr2.2 CDS 73417143 73417232 73417143 ID=cds.MS.gene047200.t1;Parent=MS.gene047200.t1
chr2.2 exon 73416345 73416488 73416345 ID=MS.gene047200.t1.exon5;Parent=MS.gene047200.t1
chr2.2 CDS 73416345 73416488 73416345 ID=cds.MS.gene047200.t1;Parent=MS.gene047200.t1
chr2.2 exon 73414210 73414758 73414210 ID=MS.gene047200.t1.exon6;Parent=MS.gene047200.t1
chr2.2 CDS 73414210 73414758 73414210 ID=cds.MS.gene047200.t1;Parent=MS.gene047200.t1
Gene Sequence

>MS.gene047200

ATGGAGACTCACTACAACCACTCTCTCTTTGAGAGACGCCCCTTTCTCACGTCCAAGGCTCCCGCTGTTAAATGGGTCAAACAATGGTACTGCCCCTTTTCTTCATCAACTCAATTTTGCATTTTTTCCTCAATTTTTAACTCAACTTTGTCCTTGAATGAATTTCTACAGCGAAAATCCAACAAATGAACGAGAAACCAAAAAAAAAAAAAATTGAGATTTTTTTGTTAAAGTTTGTTTGGAATTTAATGTATTAATCATAGCAATGTTATTATCAGGGTTCCACAAGACGTTGTTGCCACTGGTGGGAAGTGTATGCTGTTAAGATGGGTAACAGGTTTGTCCTTTTTTACTGTCAATTGAGCTTAAATTTGAATGAGCTGAATTTGTTTCCAATAAATTAAGCACCCATAATTTTCCCTTTAGGTTATTTGTAATGTTGATTTATCATGGTTCGTATTTCTGTTGCTTATGATTGACCTATCTTTCTGATTAGACATTAGACAATAGACAACATAATTTCATAATGTTCTTCGTATGTAGATCATGTTCTTAATCAAACGATGGTTTATAATTTCCTAACTTTACAAGTATGAATTGGTACATAGCATTCTTCATGATGTTTCATAAAAACTCTACGGCAAAATTACACTTCTGGTCCTTAACTTAATATTAGATAACATTAGATAACGATTTGTTCATTTATCTTTTTTATTCCCGTCAATTTAGCCCTTTTGGCCCATTTGCATTTTTTTTTAATGGAAAATGTTACTAGTTAGATTGGTTTTTTCTCCTTCGTTCCGGTTTGAACCAGGACCTCAAACTCCTCATCCTGCTGCTCAAACAAGATGGGATACTAACCCCCTTGATCCGTTTGCATATGAATTTTCAAGCTTCAAATCTATGGTTTTATTTTCCTGTGAGTTCTCAGTCTTCAAATCTATGGTCCTTCACCCATGTTTGCACATGAATCTTAGATTTGAAGCTTGAAAATTCATATGCAAAAGGATCAAAAGGGTTAAATTTACCAAAAAAAAGTAAAGGAGCAAATTGTTATCTGAAATTAAGAGATCACGGGTGTAATTTTGCCAAACGCTGCATGTATGAATGAATTAATACTGCTGGTGCTGATGTGTCGCTTTAATAAAGTGACTATTGCCATGTCGTACTAGAACAACCTTTCATAGCACACATGAACAGTAAACCCTGACATAACTATCTCAAATACTCACACACCCCCAAAAAAATCTGTTCATAATGCTGCATTTCTAGTCTACCCTACTAAGTGGGATAAGGCTTGGTTGTGTTGGTGGTTGTTGTAATGCTTCATTTCTACGTTGGTTTATAGTTTACAATCTTTAGCATTTTTGTGTTATGTTTCTGTTACCAATTTGCTTTCCAGTTATCTTTCATAACAATCTGCAAACTCATGTATTTCTGAATGGTTTTATTGATGCAAAAAGGAACAAAGCATGTATTTTCACAGTTATAGAGCATTTGATTAGTTGAATGTTAAGCAAGCTTGGTTTGCATCCAAGCAATTATTATATTGTATGTGATTATATTCATCACGTCTTCTATATTAACAATTTTCTGTGTTTTGTTTTCTTTAGAGGATACCATAAATGCCTTGAAAGAAAAGGAAAAAGAACCATTAGCTCCTGAGCCAGAACCCGAGCCAACTACTGAAGTACTTTTTCTTTGTAGCTATGAAGGCTGTGGAAAGACATTTATAGATGCTGGTGCTTTGAGGAAGCATTCCCACATCCATGGAGAGAGGCAGTTTGTTTGCCATTATGAGGGGTGTGGAAAGGTAATGAAACTGTTTCTTCGGATTCACGCACTCACAAGCACAGAAATGCATGTTAGGCTTTAATGTTGTAACATACTTGGTTCATTGTAAATCCTTTAACAATTTTTGTGAAGCTTCATAATAATCATTTTGATTTACATAATAATGCCATGTCTTTACTCACCTATACTCCCATCCTAGTTTCCATTTTTTGTAATTTCAGGTGTTGTAATTTCAGGTGTATTTAGTAACACACACATGTATGCTGGTTATGTTGTATGGTTGTAACCAATAATTGCTCAAGATAGATCCTTATTAATTTTTCCATCTAGTTTCATAAAAAAGTTTCTGTCTAGCGCTGTGTCTCAATGTACAGCTCTTATGTTTGCCAAATGTCAGGTCTATTTAGAAATTACTAAGAATATTTTGTTTTTGTTGCAGAAATTTCTGGACAGCTCAAAGTTAAAAAGACATTTCTTAATTCATACGGGGGAGAGGGATTTTGTGTGTCCTCATGAAGGCTGTGGTAAGGTGATAAATCGATCCATTGCCCTTGTTTATTGATCTCTTAAGGTTTTCATTTTTTCGTATTTTGAATCACCTTTATGTTTGGCATATTCCATCATACCCTGAATATCAGCAAAAACTCTTCTTTTATTATCGTTCACTCTGAACCTAATTACTGATCTGTTTTTTCCTTCATTGTAATGATCAAATATTTGCGCTCTAAAGCTTCAGCAGCAAGGTAATGAGGTATATGACTATTCAGCAGTGGGTCACTTTGACTGCTGATATAGAAGATGATTAATAGATTTGGGAAATCGTCAGTTTAGAATCAATGTACAATAAATATTGTTTGGTTGATGACTGTACTGTTACTGTAAATCACCGTTTCCATGGTCACTATGGGTTTCGAATAAATGAGTTTTTCTGAATATGATTTTTTTTTTTTTTTTAACTTAATAGCCCCATGATTGAATCCGATATGAAGTTAGTTCATGGCTCAATATATATGTAAGATGTATAGACAATGATTCAAACCTTCTTTGTGGTATTATTGTTTAAGGATCTTCTTCAACAAGTCAAAACCTTGCATTTGGAAAAGATAATTTTAGTATCATATTGTCTGGATTCATTTTTAATTATTCATTAGTGACTCTAAGTTTTGTTTGTGCCAATATGCAGGCCTTCTCCTTGGATTTTAACCTGAGGTCTCACATGAAGACACATTCACAAGAGAATTATCATATATGCCCATACCCAGATTGTGGGAAGAGATACGCTCATGAATACAAGCTAAAGAATCACATTGCTTCCCATCATGAAAAGGTTGGTTAATATTTCCTGTTTGTGTAACTGTGATCTATTTATATTCTATTCTAAATGGAGTAAATAGGCAATCACCCCCCCGAAATTGTAAGTTTCGTCAATTACCCCCCTGACATTAACAAAATTTCAATTACCCCCCTGAAATTGCACAACGTTAATCAATTTACCCCCTCTGTCAAATTTTTCCGTTAGTCAACATGACGTTTTGCAAATACCCCCCTGAAGTTTTGCGCTTATGTGCAAAATACCCCTTAAATTTATAATAATCAAGCAAATTGGTCCTTGTGACAAAAAAAATATTCTTTTGCACCCAATTTTTTTTATCTTTATATGCTAATGATATCTGAATTTTTCGCAAAGGATCAAATAGGAACATCAAATGCATTAAGAAAATCTTTAAACTATATGGTGAAAGTCTTTAGCATGTAAACTTAAGAAAGAATAATTTTTATGCTGGATCTATTAACCCTGTCTGAAGTGCAATGCTTGCTCATGTAATTAGCTTTAACCTGGCTGTTATACCTTTCAAATATTTGGGAGTCCACATTTTGAAAGATAAACCTAAGATCAGTTACTTTAATGATATATGTGATGCAATTAAAGTTAAGCTTGCTACTTGGAAGGGAATTTTTCTGTCTATAATGGGTACAGTTTGACTCATCAAGTTTGTTATTCATGGCATGCTCACATTTTCTTTTTGCAATTACCTATGGCCTGTACATCTTTCGAAGCAACTTGATCAATGGTTTCCAAAATTCATATGAAGTGGATATATTTCAACTTGAATGACTCTGCTATTTTACTTCTTTGTTGGAAGCTTTTAAGTTCTAACAGTGTATTACTGAGAGATTCAAGATAATACTCTAAAGATCATTGCTATTGGTGCAAATATAAGATTTTGGACTAATAATTGGCTTGGGATTGGTGCAAATATAAGATTTTGGACTCATTGTTGCTTATGTTATAATTCTTGAGACTTCCTCACATTTGTTGCTCACTTGTTGATCATAATCATTGGGGATAAGAAAAAAAATATATAAATTTTAAAGTTCGGGGGGCATTTTGCACATAAGTGCAAAACTTCAGGGGGTATTTGCAAAACATTATGTTGACTAACAGAAAAATTTGACGAAGGGGGTAAATTGATTAACGTTGTACAATTTTAGGGGGGTAATTGAAGTTTTATTAATGTCGGGGGGGTAATTGACGAAACTTACAATTTCAAGGGGGTAATTGCCTATTTACTCATTCTAAATGTGTTCACAATCACAATAGATGGTACTACCTGTCTCATGAAGTATGATTTTAATATGTGCACTTGGTTTCCATCTAGAGGTTTCATTTGACGTGCAAAATATATACATATTTTAATACTATTTTGCAAGGTTTCTGATATCTTCGATATCTATAATCTGTTTACAATTTAAATGATGCATGACTGCACTTTTGGATGTAGATGTGCATGAATAATGTGAAGTATCACCTCAAACAATTTTTGATTGAGCACTTTTGGATGTAGATGTGCATGAATAATGTGAAGTATCACCTCAAACAATTTTTGATTGACAGTCTTAACCTCACTGCAGAGTACACCAATAGATGTGCCGATAAAGTATGCAACTCCTCCTTCAGAAAAGCAAACAAAAACTGCTAGACCTTCTGGAGCGACATACGGTTCGGCATCCTCTGATCGCCCATATGCATGTCCTTATGAAGGGTGTGAAAAGGCTTACATTCATGAGTACAAGCTTAAACTGCATTTAAAGAGGGAGCATCCTGGCCACATAAATGATGAAAATGCTATGCATGCTCTGGCTAATAATGCTGAAAATGAAATGGATGAAGCAAGTGATCACGATGCTTATGGTGGAAAACGTTCCAATGGTAAAAGTCAGAAGCAAAGCAGGCCCAAGCCAAACTTGAAAATGCCTCCTTCTAAAGTTGCTCAGCGTAAAGGGTCTACTCCAACCCCTGCCACTTTTAATATGGCTAAAAAACCTTGGCCAGTGAAAGAAGAAACTTACGATGAAGACAGCGAAGAAACTGAGGAGGAGGATCGTGACAATGTTGAAGATGGTTGGAGATATGCTGGAAACAACGAAGATGATGATGAGGAAACAGAATATGAAGACTGA
Protein sequence

>MS.gene047200.t1

METHYNHSLFERRPFLTSKAPAVKWVKQWVPQDVVATGGKCMLLRWVTEDTINALKEKEKEPLAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKSTPIDVPIKYATPPSEKQTKTARPSGATYGSASSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHINDENAMHALANNAENEMDEASDHDAYGGKRSNGKSQKQSRPKPNLKMPPSKVAQRKGSTPTPATFNMAKKPWPVKEETYDEDSEETEEEDRDNVEDGWRYAGNNEDDDEETEYED