Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57256.t1 | RHN77126.1 | 99.7 | 308 | 1 | 0 | 1 | 308 | 49 | 356 | 3.40E-173 | 617.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57256.t1 | Q8H1Q2 | 76.9 | 299 | 68 | 1 | 1 | 298 | 48 | 346 | 1.7e-133 | 476.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57256.t1 | A0A072VEC7 | 99.7 | 308 | 1 | 0 | 1 | 308 | 1 | 308 | 2.5e-173 | 617.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene49327 | MS.gene57256 | PPI |
MS.gene57256 | MS.gene036137 | PPI |
MS.gene39890 | MS.gene57256 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57256.t1 | MTR_1g016110 | 99.675 | 308 | 1 | 0 | 1 | 308 | 1 | 308 | 0.0 | 625 |
MS.gene57256.t1 | MTR_1g016110 | 99.675 | 308 | 1 | 0 | 1 | 308 | 48 | 355 | 0.0 | 622 |
MS.gene57256.t1 | MTR_1g019620 | 99.026 | 308 | 3 | 0 | 1 | 308 | 48 | 355 | 0.0 | 618 |
MS.gene57256.t1 | MTR_1g070360 | 34.564 | 298 | 143 | 10 | 7 | 296 | 17 | 270 | 1.17e-42 | 148 |
MS.gene57256.t1 | MTR_6g086600 | 40.000 | 180 | 103 | 3 | 8 | 187 | 164 | 338 | 3.36e-31 | 122 |
MS.gene57256.t1 | MTR_6g086600 | 40.000 | 180 | 103 | 3 | 8 | 187 | 173 | 347 | 3.54e-31 | 122 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57256.t1 | AT5G50960 | 76.393 | 305 | 69 | 2 | 1 | 304 | 48 | 350 | 3.09e-171 | 478 |
MS.gene57256.t1 | AT4G19540 | 43.005 | 193 | 100 | 5 | 7 | 196 | 38 | 223 | 2.56e-38 | 138 |
MS.gene57256.t1 | AT3G24430 | 39.444 | 180 | 104 | 3 | 8 | 187 | 172 | 346 | 3.69e-31 | 122 |
Find 77 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCGATTAAATTCAGCATTTC+AGG | 0.187756 | 1.4:+6247687 | None:intergenic |
CCTTCTAGGCCAAGCATCTT+TGG | 0.224706 | 1.4:+6248188 | None:intergenic |
ATCTTTCATCTCACCATTAT+CGG | 0.267237 | 1.4:+6247749 | None:intergenic |
GGTGTATCTCTTGACCTTCT+AGG | 0.281189 | 1.4:+6248174 | None:intergenic |
GTCTATGTTGAGTCTAATCT+TGG | 0.283572 | 1.4:-6248128 | MS.gene57256:CDS |
AATCTTGGGGTCATGTCAAT+TGG | 0.295181 | 1.4:-6248113 | MS.gene57256:CDS |
ATCCAGACGAAGCTGTTATA+TGG | 0.325193 | 1.4:-6248076 | MS.gene57256:CDS |
TTTATGAAGATTACCGATAA+TGG | 0.328286 | 1.4:-6247762 | MS.gene57256:CDS |
GAGATGGCGGTACCCTTTCT+TGG | 0.328779 | 1.4:-6247612 | MS.gene57256:CDS |
CTTCTAGGCCAAGCATCTTT+GGG | 0.359162 | 1.4:+6248189 | None:intergenic |
AAAGTTGGAGTGAAAGTTCT+TGG | 0.364693 | 1.4:-6247834 | MS.gene57256:CDS |
TTTCACAGTGGCCATTCTTT+CGG | 0.375809 | 1.4:+6248343 | None:intergenic |
CTAATTGTCGATGCTCCGCC+TGG | 0.379301 | 1.4:-6247984 | MS.gene57256:CDS |
CAGCTAACGCAAATGCCAGC+TGG | 0.379548 | 1.4:+6248264 | None:intergenic |
CCAAAGATGCTTGGCCTAGA+AGG | 0.402010 | 1.4:-6248188 | MS.gene57256:CDS |
CCAAGCATCTTTGGGATGCT+TGG | 0.406720 | 1.4:+6248197 | None:intergenic |
TCTATGTTGAGTCTAATCTT+GGG | 0.416626 | 1.4:-6248127 | MS.gene57256:CDS |
CACTGTGAAACATAAGATAC+TGG | 0.420840 | 1.4:-6248330 | MS.gene57256:CDS |
AAGTTGGAGTGAAAGTTCTT+GGG | 0.429446 | 1.4:-6247833 | MS.gene57256:CDS |
GGCGGTACCCTTTCTTGGTA+AGG | 0.430728 | 1.4:-6247607 | MS.gene57256:CDS |
ATCTTGGGGTCATGTCAATT+GGG | 0.431936 | 1.4:-6248112 | MS.gene57256:CDS |
CATAAGATACTGGTCTTGTC+AGG | 0.432544 | 1.4:-6248320 | MS.gene57256:CDS |
TAAAGGAACCTTACCAAGAA+AGG | 0.434925 | 1.4:+6247599 | None:intergenic |
AGTGAAAGTTCTTGGGGTTG+TGG | 0.435467 | 1.4:-6247826 | MS.gene57256:CDS |
AGATGTTACGGAGTGGATAT+CGG | 0.437420 | 1.4:-6247730 | MS.gene57256:CDS |
ACTTGAGATTTGAGATGGGC+TGG | 0.443213 | 1.4:+6247784 | None:intergenic |
AGCTAACGCAAATGCCAGCT+GGG | 0.447107 | 1.4:+6248265 | None:intergenic |
CTCCATATAACAGCTTCGTC+TGG | 0.454307 | 1.4:+6248074 | None:intergenic |
CATAAACTTGAGATTTGAGA+TGG | 0.455458 | 1.4:+6247779 | None:intergenic |
CGTCTACATTAGCAGCATCT+AGG | 0.458881 | 1.4:+6247928 | None:intergenic |
ATACTGGTCTTGTCAGGAAA+AGG | 0.475392 | 1.4:-6248314 | MS.gene57256:CDS |
CTTTGCAAGGCAGCTGAAGA+AGG | 0.475604 | 1.4:-6247567 | MS.gene57256:CDS |
TGGTGAGATGAAAGATGTTA+CGG | 0.483466 | 1.4:-6247742 | MS.gene57256:CDS |
ATGTGTTCATCTGAGGTTCC+AGG | 0.485714 | 1.4:+6247966 | None:intergenic |
GGCATTTGCGTTAGCTGCAA+GGG | 0.486589 | 1.4:-6248258 | MS.gene57256:CDS |
GAGACCAACCAAGGTTGCTC+TGG | 0.487893 | 1.4:+6248153 | None:intergenic |
CTTCTGGACATTGATATTTG+CGG | 0.495696 | 1.4:-6248221 | MS.gene57256:CDS |
GATTTGAGATGGGCTGGGAC+AGG | 0.504393 | 1.4:+6247790 | None:intergenic |
TTGCAAAGCTGTGGATCTAA+AGG | 0.505094 | 1.4:+6247582 | None:intergenic |
GGTTGCCATTGCCGAAAGAA+TGG | 0.507040 | 1.4:-6248354 | MS.gene57256:CDS |
CTTGAGATTTGAGATGGGCT+GGG | 0.511450 | 1.4:+6247785 | None:intergenic |
GTATTTGATAGTAGCGGTGG+TGG | 0.514266 | 1.4:-6247654 | MS.gene57256:CDS |
TCAGCTGCCTTGCAAAGCTG+TGG | 0.521436 | 1.4:+6247573 | None:intergenic |
AAAGGAACCTTACCAAGAAA+GGG | 0.525559 | 1.4:+6247600 | None:intergenic |
TGGCATTTGCGTTAGCTGCA+AGG | 0.531152 | 1.4:-6248259 | MS.gene57256:CDS |
GATAAGCTGATGGAAACTAG+TGG | 0.534659 | 1.4:-6247483 | MS.gene57256:CDS |
AGATTAGACTCAACATAGAC+AGG | 0.537946 | 1.4:+6248131 | None:intergenic |
CCAAGCATCCCAAAGATGCT+TGG | 0.539567 | 1.4:-6248197 | MS.gene57256:CDS |
GAGATACACCAGAGCAACCT+TGG | 0.541471 | 1.4:-6248161 | MS.gene57256:CDS |
AGTGGCCATTCTTTCGGCAA+TGG | 0.546079 | 1.4:+6248349 | None:intergenic |
TACACCAGAGCAACCTTGGT+TGG | 0.551299 | 1.4:-6248157 | MS.gene57256:CDS |
AGTTGGAGTGAAAGTTCTTG+GGG | 0.553652 | 1.4:-6247832 | MS.gene57256:CDS |
ATAACAGCTTCGTCTGGATG+AGG | 0.554608 | 1.4:+6248080 | None:intergenic |
AATTGAAATGTGTTCATCTG+AGG | 0.559191 | 1.4:+6247959 | None:intergenic |
ATAAACTTGAGATTTGAGAT+GGG | 0.559421 | 1.4:+6247780 | None:intergenic |
TTGTCAGGAAAAGGAGGTGT+TGG | 0.559918 | 1.4:-6248305 | MS.gene57256:CDS |
AAAGATAATAGATAAGCTGA+TGG | 0.562227 | 1.4:-6247493 | MS.gene57256:CDS |
AACTAGTGGGCTGTCAATGA+CGG | 0.568788 | 1.4:-6247469 | MS.gene57256:CDS |
ACTATCAAATACTTCACTGC+AGG | 0.571986 | 1.4:+6247665 | None:intergenic |
CTATGTTGAGTCTAATCTTG+GGG | 0.574536 | 1.4:-6248126 | MS.gene57256:CDS |
CTGTCAATGACGGAAAGCAA+TGG | 0.575375 | 1.4:-6247459 | MS.gene57256:CDS |
GACGAAGCTGTTATATGGAG+AGG | 0.584494 | 1.4:-6248071 | MS.gene57256:CDS |
ATAAGCTGATGGAAACTAGT+GGG | 0.602164 | 1.4:-6247482 | MS.gene57256:CDS |
TTTAGATCCACAGCTTTGCA+AGG | 0.603851 | 1.4:-6247580 | MS.gene57256:CDS |
GTTGAAGATGTGTAACGAGA+TGG | 0.614173 | 1.4:-6247628 | MS.gene57256:CDS |
CTGGTCTTGTCAGGAAAAGG+AGG | 0.619582 | 1.4:-6248311 | MS.gene57256:CDS |
AAGAGAGACTTGTTGAGGAG+TGG | 0.628280 | 1.4:+6247890 | None:intergenic |
AGATGAAAGATGTTACGGAG+TGG | 0.628653 | 1.4:-6247737 | MS.gene57256:CDS |
CTAGATGCTGCTAATGTAGA+CGG | 0.629983 | 1.4:-6247927 | MS.gene57256:CDS |
GAAGTATTTGATAGTAGCGG+TGG | 0.649921 | 1.4:-6247657 | MS.gene57256:CDS |
TCAATAAGAGAGACTTGTTG+AGG | 0.650660 | 1.4:+6247885 | None:intergenic |
GGGGTTGTGGAGAATATGAG+TGG | 0.671351 | 1.4:-6247813 | MS.gene57256:CDS |
AGTGAAGTATTTGATAGTAG+CGG | 0.680092 | 1.4:-6247660 | MS.gene57256:CDS |
CATAGACAGGAGACCAACCA+AGG | 0.702138 | 1.4:+6248144 | None:intergenic |
GAAGATGTGTAACGAGATGG+CGG | 0.710160 | 1.4:-6247625 | MS.gene57256:CDS |
CAGTATCTTATGTTTCACAG+TGG | 0.751734 | 1.4:+6248331 | None:intergenic |
TGTTCATCTGAGGTTCCAGG+CGG | 0.754863 | 1.4:+6247969 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AGTTTTTAAAAGACGTTTAT+TGG | - | chr1.4:6247786-6247805 | MS.gene57256:CDS | 20.0% |
!!! | GTTTTTAAAAGACGTTTATT+GGG | - | chr1.4:6247787-6247806 | MS.gene57256:CDS | 20.0% |
!!! | TTTTTAAAAGACGTTTATTG+GGG | - | chr1.4:6247788-6247807 | MS.gene57256:CDS | 20.0% |
! | AAAGATAATAGATAAGCTGA+TGG | - | chr1.4:6248315-6248334 | MS.gene57256:CDS | 25.0% |
! | TTTATGAAGATTACCGATAA+TGG | - | chr1.4:6248046-6248065 | MS.gene57256:CDS | 25.0% |
!! | ATAAACTTGAGATTTGAGAT+GGG | + | chr1.4:6248031-6248050 | None:intergenic | 25.0% |
!! | TCTATTATCTTTTGTAATGC+TGG | + | chr1.4:6248307-6248326 | None:intergenic | 25.0% |
AATTGAAATGTGTTCATCTG+AGG | + | chr1.4:6247852-6247871 | None:intergenic | 30.0% | |
ATCTTTCATCTCACCATTAT+CGG | + | chr1.4:6248062-6248081 | None:intergenic | 30.0% | |
CATAAACTTGAGATTTGAGA+TGG | + | chr1.4:6248032-6248051 | None:intergenic | 30.0% | |
TCTATGTTGAGTCTAATCTT+GGG | - | chr1.4:6247681-6247700 | MS.gene57256:CDS | 30.0% | |
! | AGTGAAGTATTTGATAGTAG+CGG | - | chr1.4:6248148-6248167 | MS.gene57256:CDS | 30.0% |
! | GTGAATTTTTGCAAGAAAGT+TGG | - | chr1.4:6247959-6247978 | MS.gene57256:CDS | 30.0% |
AAAGGAACCTTACCAAGAAA+GGG | + | chr1.4:6248211-6248230 | None:intergenic | 35.0% | |
AAAGTTGGAGTGAAAGTTCT+TGG | - | chr1.4:6247974-6247993 | MS.gene57256:CDS | 35.0% | |
AAGTTGGAGTGAAAGTTCTT+GGG | - | chr1.4:6247975-6247994 | MS.gene57256:CDS | 35.0% | |
ACTATCAAATACTTCACTGC+AGG | + | chr1.4:6248146-6248165 | None:intergenic | 35.0% | |
AGATTAGACTCAACATAGAC+AGG | + | chr1.4:6247680-6247699 | None:intergenic | 35.0% | |
ATAAGCTGATGGAAACTAGT+GGG | - | chr1.4:6248326-6248345 | MS.gene57256:CDS | 35.0% | |
CACTGTGAAACATAAGATAC+TGG | - | chr1.4:6247478-6247497 | MS.gene57256:CDS | 35.0% | |
CAGTATCTTATGTTTCACAG+TGG | + | chr1.4:6247480-6247499 | None:intergenic | 35.0% | |
CTATGTTGAGTCTAATCTTG+GGG | - | chr1.4:6247682-6247701 | MS.gene57256:CDS | 35.0% | |
CTTCTGGACATTGATATTTG+CGG | - | chr1.4:6247587-6247606 | MS.gene57256:CDS | 35.0% | |
GCGATTAAATTCAGCATTTC+AGG | + | chr1.4:6248124-6248143 | None:intergenic | 35.0% | |
GTCTATGTTGAGTCTAATCT+TGG | - | chr1.4:6247680-6247699 | MS.gene57256:CDS | 35.0% | |
TAAAGGAACCTTACCAAGAA+AGG | + | chr1.4:6248212-6248231 | None:intergenic | 35.0% | |
TGGTGAGATGAAAGATGTTA+CGG | - | chr1.4:6248066-6248085 | MS.gene57256:CDS | 35.0% | |
!! | TCAATAAGAGAGACTTGTTG+AGG | + | chr1.4:6247926-6247945 | None:intergenic | 35.0% |
!! | TTGATAAGACCATTTTTGCG+TGG | + | chr1.4:6247764-6247783 | None:intergenic | 35.0% |
AATCTTGGGGTCATGTCAAT+TGG | - | chr1.4:6247695-6247714 | MS.gene57256:CDS | 40.0% | |
AGATGAAAGATGTTACGGAG+TGG | - | chr1.4:6248071-6248090 | MS.gene57256:CDS | 40.0% | |
AGATGTTACGGAGTGGATAT+CGG | - | chr1.4:6248078-6248097 | MS.gene57256:CDS | 40.0% | |
AGTTGGAGTGAAAGTTCTTG+GGG | - | chr1.4:6247976-6247995 | MS.gene57256:CDS | 40.0% | |
ATCCAGACGAAGCTGTTATA+TGG | - | chr1.4:6247732-6247751 | MS.gene57256:CDS | 40.0% | |
ATCTTGGGGTCATGTCAATT+GGG | - | chr1.4:6247696-6247715 | MS.gene57256:CDS | 40.0% | |
CTAGATGCTGCTAATGTAGA+CGG | - | chr1.4:6247881-6247900 | MS.gene57256:CDS | 40.0% | |
GATAAGCTGATGGAAACTAG+TGG | - | chr1.4:6248325-6248344 | MS.gene57256:CDS | 40.0% | |
GTTGAAGATGTGTAACGAGA+TGG | - | chr1.4:6248180-6248199 | MS.gene57256:CDS | 40.0% | |
TTGCAAAGCTGTGGATCTAA+AGG | + | chr1.4:6248229-6248248 | None:intergenic | 40.0% | |
TTTAGATCCACAGCTTTGCA+AGG | - | chr1.4:6248228-6248247 | MS.gene57256:CDS | 40.0% | |
TTTCACAGTGGCCATTCTTT+CGG | + | chr1.4:6247468-6247487 | None:intergenic | 40.0% | |
! | GAAGTATTTGATAGTAGCGG+TGG | - | chr1.4:6248151-6248170 | MS.gene57256:CDS | 40.0% |
! | TAGATCGTGTTTTGCAGGTA+AGG | - | chr1.4:6248264-6248283 | MS.gene57256:CDS | 40.0% |
!! | ATACTGGTCTTGTCAGGAAA+AGG | - | chr1.4:6247494-6247513 | MS.gene57256:CDS | 40.0% |
!! | CATAAGATACTGGTCTTGTC+AGG | - | chr1.4:6247488-6247507 | MS.gene57256:CDS | 40.0% |
!!! | GGATTTTCAAGTTGGTCTTC+TGG | - | chr1.4:6247571-6247590 | MS.gene57256:CDS | 40.0% |
AGTGAAAGTTCTTGGGGTTG+TGG | - | chr1.4:6247982-6248001 | MS.gene57256:CDS | 45.0% | |
ATAACAGCTTCGTCTGGATG+AGG | + | chr1.4:6247731-6247750 | None:intergenic | 45.0% | |
CGTCTACATTAGCAGCATCT+AGG | + | chr1.4:6247883-6247902 | None:intergenic | 45.0% | |
CTCCATATAACAGCTTCGTC+TGG | + | chr1.4:6247737-6247756 | None:intergenic | 45.0% | |
CTTCTAGGCCAAGCATCTTT+GGG | + | chr1.4:6247622-6247641 | None:intergenic | 45.0% | |
GAAGATGTGTAACGAGATGG+CGG | - | chr1.4:6248183-6248202 | MS.gene57256:CDS | 45.0% | |
GACGAAGCTGTTATATGGAG+AGG | - | chr1.4:6247737-6247756 | MS.gene57256:CDS | 45.0% | |
GGTGTATCTCTTGACCTTCT+AGG | + | chr1.4:6247637-6247656 | None:intergenic | 45.0% | |
! | ACTTGAGATTTGAGATGGGC+TGG | + | chr1.4:6248027-6248046 | None:intergenic | 45.0% |
! | ATGTGTTCATCTGAGGTTCC+AGG | + | chr1.4:6247845-6247864 | None:intergenic | 45.0% |
! | CTGTCAATGACGGAAAGCAA+TGG | - | chr1.4:6248349-6248368 | MS.gene57256:CDS | 45.0% |
! | CTTGAGATTTGAGATGGGCT+GGG | + | chr1.4:6248026-6248045 | None:intergenic | 45.0% |
! | GAAGGTAGATCGTGTTTTGC+AGG | - | chr1.4:6248259-6248278 | MS.gene57256:CDS | 45.0% |
! | GTATTTGATAGTAGCGGTGG+TGG | - | chr1.4:6248154-6248173 | MS.gene57256:CDS | 45.0% |
! | TTGTCAGGAAAAGGAGGTGT+TGG | - | chr1.4:6247503-6247522 | MS.gene57256:CDS | 45.0% |
!! | AACTAGTGGGCTGTCAATGA+CGG | - | chr1.4:6248339-6248358 | MS.gene57256:CDS | 45.0% |
!! | AAGAGAGACTTGTTGAGGAG+TGG | + | chr1.4:6247921-6247940 | None:intergenic | 45.0% |
!!! | GCTGCAAGGGATTTTCAAGT+TGG | - | chr1.4:6247563-6247582 | MS.gene57256:CDS | 45.0% |
AGCTAACGCAAATGCCAGCT+GGG | + | chr1.4:6247546-6247565 | None:intergenic | 50.0% | |
AGTGGCCATTCTTTCGGCAA+TGG | + | chr1.4:6247462-6247481 | None:intergenic | 50.0% | |
CATAGACAGGAGACCAACCA+AGG | + | chr1.4:6247667-6247686 | None:intergenic | 50.0% | |
CCAAAGATGCTTGGCCTAGA+AGG | - | chr1.4:6247620-6247639 | MS.gene57256:CDS | 50.0% | |
CCAAGCATCCCAAAGATGCT+TGG | - | chr1.4:6247611-6247630 | MS.gene57256:CDS | 50.0% | |
CCTTCTAGGCCAAGCATCTT+TGG | + | chr1.4:6247623-6247642 | None:intergenic | 50.0% | |
CTTTGCAAGGCAGCTGAAGA+AGG | - | chr1.4:6248241-6248260 | MS.gene57256:CDS | 50.0% | |
GAGATACACCAGAGCAACCT+TGG | - | chr1.4:6247647-6247666 | MS.gene57256:CDS | 50.0% | |
GGCATTTGCGTTAGCTGCAA+GGG | - | chr1.4:6247550-6247569 | MS.gene57256:CDS | 50.0% | |
GGGGTTGTGGAGAATATGAG+TGG | - | chr1.4:6247995-6248014 | MS.gene57256:CDS | 50.0% | |
GGTTGCCATTGCCGAAAGAA+TGG | - | chr1.4:6247454-6247473 | MS.gene57256:CDS | 50.0% | |
TACACCAGAGCAACCTTGGT+TGG | - | chr1.4:6247651-6247670 | MS.gene57256:CDS | 50.0% | |
TGGAGAGGTCCACGCAAAAA+TGG | - | chr1.4:6247752-6247771 | MS.gene57256:CDS | 50.0% | |
TGGCATTTGCGTTAGCTGCA+AGG | - | chr1.4:6247549-6247568 | MS.gene57256:CDS | 50.0% | |
! | TGTTCATCTGAGGTTCCAGG+CGG | + | chr1.4:6247842-6247861 | None:intergenic | 50.0% |
!! | CCAAGCATCTTTGGGATGCT+TGG | + | chr1.4:6247614-6247633 | None:intergenic | 50.0% |
!! | CTGGTCTTGTCAGGAAAAGG+AGG | - | chr1.4:6247497-6247516 | MS.gene57256:CDS | 50.0% |
CAGCTAACGCAAATGCCAGC+TGG | + | chr1.4:6247547-6247566 | None:intergenic | 55.0% | |
CTAATTGTCGATGCTCCGCC+TGG | - | chr1.4:6247824-6247843 | MS.gene57256:CDS | 55.0% | |
GAGACCAACCAAGGTTGCTC+TGG | + | chr1.4:6247658-6247677 | None:intergenic | 55.0% | |
GGCGGTACCCTTTCTTGGTA+AGG | - | chr1.4:6248201-6248220 | MS.gene57256:CDS | 55.0% | |
TCAGCTGCCTTGCAAAGCTG+TGG | + | chr1.4:6248238-6248257 | None:intergenic | 55.0% | |
! | GAGATGGCGGTACCCTTTCT+TGG | - | chr1.4:6248196-6248215 | MS.gene57256:CDS | 55.0% |
! | GAGCACATTTTCTGCCCAGC+TGG | - | chr1.4:6247529-6247548 | MS.gene57256:CDS | 55.0% |
!! | GATTTGAGATGGGCTGGGAC+AGG | + | chr1.4:6248021-6248040 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 6247452 | 6248378 | 6247452 | ID=MS.gene57256 |
chr1.4 | mRNA | 6247452 | 6248378 | 6247452 | ID=MS.gene57256.t1;Parent=MS.gene57256 |
chr1.4 | exon | 6247452 | 6248378 | 6247452 | ID=MS.gene57256.t1.exon1;Parent=MS.gene57256.t1 |
chr1.4 | CDS | 6247452 | 6248378 | 6247452 | ID=cds.MS.gene57256.t1;Parent=MS.gene57256.t1 |
Gene Sequence |
Protein sequence |