Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57835.t1 | XP_003620150.1 | 99.1 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 2.20E-178 | 634.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57835.t1 | Q6ZL94 | 86.8 | 325 | 37 | 2 | 5 | 323 | 7 | 331 | 9.7e-159 | 560.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57835.t1 | G7KKB4 | 99.1 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 1.6e-178 | 634.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05212 | MS.gene57835 | 0.924511 | 6.39E-90 | -1.69E-46 |
| MS.gene052190 | MS.gene57835 | -0.807585 | 4.70E-50 | -1.69E-46 |
| MS.gene052361 | MS.gene57835 | 0.807714 | 4.42E-50 | -1.69E-46 |
| MS.gene055488 | MS.gene57835 | 0.803476 | 3.42E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene57835 | 0.801692 | 7.99E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57835.t1 | MTR_6g077820 | 99.071 | 323 | 3 | 0 | 1 | 323 | 1 | 323 | 0.0 | 649 |
| MS.gene57835.t1 | MTR_2g034090 | 32.710 | 214 | 132 | 3 | 116 | 318 | 104 | 316 | 3.14e-22 | 97.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57835.t1 | AT5G23250 | 86.293 | 321 | 39 | 2 | 5 | 323 | 24 | 341 | 0.0 | 560 |
| MS.gene57835.t1 | AT5G08300 | 87.296 | 307 | 37 | 1 | 19 | 323 | 40 | 346 | 0.0 | 553 |
| MS.gene57835.t1 | AT5G23250 | 88.000 | 275 | 28 | 2 | 5 | 277 | 24 | 295 | 1.93e-175 | 488 |
| MS.gene57835.t1 | AT5G23250 | 86.463 | 229 | 26 | 2 | 5 | 231 | 24 | 249 | 8.01e-142 | 401 |
| MS.gene57835.t1 | AT3G06650 | 31.776 | 214 | 134 | 3 | 116 | 318 | 104 | 316 | 1.84e-21 | 95.5 |
| MS.gene57835.t1 | AT3G06650 | 31.776 | 214 | 134 | 3 | 116 | 318 | 104 | 316 | 1.84e-21 | 95.5 |
| MS.gene57835.t1 | AT5G49460 | 32.243 | 214 | 133 | 3 | 116 | 318 | 104 | 316 | 2.81e-21 | 94.7 |
| MS.gene57835.t1 | AT5G49460 | 32.243 | 214 | 133 | 3 | 116 | 318 | 104 | 316 | 2.81e-21 | 94.7 |
Find 94 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTCAGGTATTATTCTTAT+TGG | 0.247983 | 6.1:-68959392 | MS.gene57835:intron |
| ATTATTCTTATTGGAGAGAT+AGG | 0.288969 | 6.1:-68959383 | MS.gene57835:CDS |
| AAAGGCGGAACGGAACATTT+AGG | 0.302614 | 6.1:-68961890 | MS.gene57835:CDS |
| CCTGTTGTTGCATTTATTGC+TGG | 0.315893 | 6.1:-68958723 | MS.gene57835:CDS |
| TGGTCCTATCAAACGAGTTT+TGG | 0.319821 | 6.1:+68960294 | None:intergenic |
| GATCGAATACGGAACGAATA+TGG | 0.323206 | 6.1:-68961933 | MS.gene57835:CDS |
| AAGCCCGGGGAATGTAAAAT+TGG | 0.326008 | 6.1:-68960253 | MS.gene57835:CDS |
| AAGGCGGAACGGAACATTTA+GGG | 0.329459 | 6.1:-68961889 | MS.gene57835:CDS |
| GTGGAGTCCCCAGCTAAAAT+TGG | 0.338774 | 6.1:-68958084 | MS.gene57835:CDS |
| AACGGAACATTTAGGGCTTC+CGG | 0.344291 | 6.1:-68961882 | MS.gene57835:CDS |
| ATTGGAATTGTTTCTCGTTC+TGG | 0.384214 | 6.1:-68960196 | MS.gene57835:CDS |
| AAAGATGTACCTTCTGTTTG+AGG | 0.393263 | 6.1:+68959550 | None:intergenic |
| CAAACAACTGCTGTTGGCCT+TGG | 0.397173 | 6.1:-68959655 | MS.gene57835:CDS |
| TGTTCCGTTCCGCCTTTCTT+CGG | 0.405095 | 6.1:+68961896 | None:intergenic |
| TCCGTATTCGATCGCTTGTT+CGG | 0.408534 | 6.1:+68961943 | None:intergenic |
| AACAAAGTTTGTTCCATTGA+AGG | 0.409176 | 6.1:+68959600 | None:intergenic |
| AGGGATTCCTCAACATGATA+TGG | 0.409706 | 6.1:-68961723 | MS.gene57835:intron |
| GGACGCTGCTGCTCTAATTA+AGG | 0.414347 | 6.1:-68959345 | MS.gene57835:intron |
| CAATCCAAAACTCGTTTGAT+AGG | 0.420569 | 6.1:-68960298 | MS.gene57835:CDS |
| ACCGAACAAGCGATCGAATA+CGG | 0.427541 | 6.1:-68961944 | MS.gene57835:CDS |
| TGAAAAGCTGCGGCGGTTGT+TGG | 0.428492 | 6.1:+68962051 | None:intergenic |
| AAGACAAAATCAGCACCCTT+AGG | 0.428915 | 6.1:-68958125 | MS.gene57835:CDS |
| CAAGGCCAACAGCAGTTGTT+TGG | 0.431303 | 6.1:+68959656 | None:intergenic |
| ATCAGCACCCTTAGGGAAGC+TGG | 0.437867 | 6.1:-68958117 | MS.gene57835:CDS |
| TTGATGATACCAGGGCAGTT+TGG | 0.446440 | 6.1:+68960274 | None:intergenic |
| TCCACATGTGTGGGCATTGG+AGG | 0.447053 | 6.1:-68959628 | MS.gene57835:CDS |
| CCGGGTTACATTCACAAACC+TGG | 0.447993 | 6.1:-68960223 | MS.gene57835:CDS |
| GCGTGTCCCATACGACGGCC+AGG | 0.457054 | 6.1:+68958687 | None:intergenic |
| TCTTGTGCAGCTATTGTGTC+AGG | 0.457964 | 6.1:-68958165 | MS.gene57835:intron |
| ACAAAGTTTGTTCCATTGAA+GGG | 0.461996 | 6.1:+68959601 | None:intergenic |
| GTGATCTGTCAAGGAATAAC+CGG | 0.473606 | 6.1:-68961986 | MS.gene57835:CDS |
| TGCCCTGGTATCATCAAGCC+CGG | 0.475481 | 6.1:-68960268 | MS.gene57835:CDS |
| ATTCACAAACCTGGGCGCAT+TGG | 0.479565 | 6.1:-68960214 | MS.gene57835:CDS |
| CCAGCAATAAATGCAACAAC+AGG | 0.479962 | 6.1:+68958723 | None:intergenic |
| CTTGTTGTTTGTATTACTGA+AGG | 0.486594 | 6.1:-68961743 | MS.gene57835:CDS |
| GGAAGCGGTTGAAGCGGAGT+TGG | 0.489889 | 6.1:-68961768 | MS.gene57835:CDS |
| CTGTGACTCCAGCTTCCCTA+AGG | 0.494628 | 6.1:+68958109 | None:intergenic |
| TGCTGCTGCTATTATGGAAG+CGG | 0.495050 | 6.1:-68961783 | MS.gene57835:CDS |
| AGCTATTGTGTCAGGTGGCA+AGG | 0.497024 | 6.1:-68958157 | MS.gene57835:CDS |
| TCCCCGGGCTTGATGATACC+AGG | 0.502694 | 6.1:+68960265 | None:intergenic |
| AAAGCTGCGGCGGTTGTTGG+AGG | 0.505830 | 6.1:+68962054 | None:intergenic |
| CAATCCACATGTGTGGGCAT+TGG | 0.513242 | 6.1:-68959631 | MS.gene57835:CDS |
| TGTAAAATTGGAATCATGCC+GGG | 0.516403 | 6.1:-68960241 | MS.gene57835:CDS |
| TCCGCAACAGAATTGAAAAC+CGG | 0.517721 | 6.1:+68961863 | None:intergenic |
| GATCTGCTAGGAACTTTGTA+AGG | 0.517985 | 6.1:+68959572 | None:intergenic |
| AGACAAAATCAGCACCCTTA+GGG | 0.519396 | 6.1:-68958124 | MS.gene57835:CDS |
| GGCGGTGTTACTCCGAAGAA+AGG | 0.520851 | 6.1:-68961908 | MS.gene57835:CDS |
| TCCTCCAATGCCCACACATG+TGG | 0.524542 | 6.1:+68959627 | None:intergenic |
| ATAATAGCAGCAGCAGCAAA+AGG | 0.524930 | 6.1:+68961791 | None:intergenic |
| GCAGCAGCAGCAAAAGGAGG+AGG | 0.535843 | 6.1:+68961797 | None:intergenic |
| AAGGGGTGGTTGAAAAGCTG+CGG | 0.539622 | 6.1:+68962041 | None:intergenic |
| ATGTAAAATTGGAATCATGC+CGG | 0.544331 | 6.1:-68960242 | MS.gene57835:CDS |
| CTGCTTGAAAATATCAAACA+TGG | 0.547001 | 6.1:+68958056 | None:intergenic |
| ATTGGAGGAGACCCCTTCAA+TGG | 0.551942 | 6.1:-68959613 | MS.gene57835:CDS |
| TTGTTGTTTGTATTACTGAA+GGG | 0.552535 | 6.1:-68961742 | MS.gene57835:CDS |
| CAAAGTTTGTTCCATTGAAG+GGG | 0.558465 | 6.1:+68959602 | None:intergenic |
| GAATGACTATTCAGGAAAGC+GGG | 0.558880 | 6.1:-68958755 | MS.gene57835:intron |
| GAAACAATTCCAATGCGCCC+AGG | 0.559949 | 6.1:+68960205 | None:intergenic |
| GCCCTGGTATCATCAAGCCC+GGG | 0.561759 | 6.1:-68960267 | MS.gene57835:CDS |
| CGTGTCCCATACGACGGCCA+GGG | 0.564279 | 6.1:+68958688 | None:intergenic |
| GCTATTGTGTCAGGTGGCAA+GGG | 0.565312 | 6.1:-68958156 | MS.gene57835:CDS |
| ATTCTTATTGGAGAGATAGG+AGG | 0.566079 | 6.1:-68959380 | MS.gene57835:CDS |
| GATAGGAGGAACTGCAGAAG+AGG | 0.574249 | 6.1:-68959366 | MS.gene57835:CDS |
| GTTTACCAAACAACTGCTGT+TGG | 0.576485 | 6.1:-68959661 | MS.gene57835:CDS |
| AGCACACGCGTGATCTGTCA+AGG | 0.576838 | 6.1:-68961995 | MS.gene57835:CDS |
| TTGATAGGACCAAACTGCCC+TGG | 0.579975 | 6.1:-68960283 | MS.gene57835:CDS |
| CGGGTTACATTCACAAACCT+GGG | 0.586223 | 6.1:-68960222 | MS.gene57835:CDS |
| CCAGGTTTGTGAATGTAACC+CGG | 0.592655 | 6.1:+68960223 | None:intergenic |
| GGAAGCTGGAGTCACAGTTG+TGG | 0.594495 | 6.1:-68958103 | MS.gene57835:CDS |
| GGCCGTCGTATGGGACACGC+TGG | 0.604310 | 6.1:-68958684 | MS.gene57835:CDS |
| GAATACGGAACGAATATGGT+TGG | 0.604847 | 6.1:-68961929 | MS.gene57835:CDS |
| CCACACATGTGGATTGTCCA+AGG | 0.608972 | 6.1:+68959638 | None:intergenic |
| CTTCTGTTTGAGGATCTGCT+AGG | 0.613418 | 6.1:+68959560 | None:intergenic |
| TACGGAACGAATATGGTTGG+CGG | 0.618944 | 6.1:-68961926 | MS.gene57835:CDS |
| TGTGACTCCAGCTTCCCTAA+GGG | 0.620490 | 6.1:+68958110 | None:intergenic |
| TGTGCAGCTATTGTGTCAGG+TGG | 0.621206 | 6.1:-68958162 | MS.gene57835:intron |
| GGGTGGTTGAAAAGCTGCGG+CGG | 0.624970 | 6.1:+68962044 | None:intergenic |
| CTAGCAGATCCTCAAACAGA+AGG | 0.626606 | 6.1:-68959559 | MS.gene57835:intron |
| TGGAACTTTGACATATGAAG+CGG | 0.628520 | 6.1:-68960176 | MS.gene57835:intron |
| CGTCGTATGGGACACGCTGG+AGG | 0.636732 | 6.1:-68958681 | MS.gene57835:intron |
| ATAGCTACCATATCATGTTG+AGG | 0.638728 | 6.1:+68961716 | None:intergenic |
| TGAATGACTATTCAGGAAAG+CGG | 0.638917 | 6.1:-68958756 | MS.gene57835:intron |
| TATTATGGAAGCGGTTGAAG+CGG | 0.641435 | 6.1:-68961774 | MS.gene57835:CDS |
| CCCTGGTATCATCAAGCCCG+GGG | 0.644773 | 6.1:-68960266 | MS.gene57835:CDS |
| CTTGGACAATCCACATGTGT+GGG | 0.646091 | 6.1:-68959637 | MS.gene57835:CDS |
| TACTCCGAAGAAAGGCGGAA+CGG | 0.647259 | 6.1:-68961900 | MS.gene57835:CDS |
| CCTTGGACAATCCACATGTG+TGG | 0.655816 | 6.1:-68959638 | MS.gene57835:CDS |
| GTGTCCCATACGACGGCCAG+GGG | 0.661520 | 6.1:+68958689 | None:intergenic |
| CCCCGGGCTTGATGATACCA+GGG | 0.670275 | 6.1:+68960266 | None:intergenic |
| ATAGCAGCAGCAGCAAAAGG+AGG | 0.675861 | 6.1:+68961794 | None:intergenic |
| CTCCAGCGTGTCCCATACGA+CGG | 0.678361 | 6.1:+68958682 | None:intergenic |
| GGTGTTACTCCGAAGAAAGG+CGG | 0.696917 | 6.1:-68961905 | MS.gene57835:CDS |
| TGTCCCATACGACGGCCAGG+GGG | 0.720720 | 6.1:+68958690 | None:intergenic |
| TTTGTCGACGAACACCGCGG+GGG | 0.744903 | 6.1:+68962018 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAACTGATAAAATAATAT+AGG | + | chr6.1:68960632-68960651 | None:intergenic | 10.0% |
| !!! | ACTATTTATAAAGTTTTTAA+CGG | - | chr6.1:68961339-68961358 | MS.gene57835:intron | 10.0% |
| !!! | ATTTTAATTTTCTAAAGTTT+TGG | - | chr6.1:68961477-68961496 | MS.gene57835:intron | 10.0% |
| !! | AATAGTTATAAACAAATAGA+TGG | + | chr6.1:68960448-68960467 | None:intergenic | 15.0% |
| !! | GGTATTAATATTTGAAAAAA+CGG | - | chr6.1:68959138-68959157 | MS.gene57835:intron | 15.0% |
| !! | GTAATTATTATTATCGTTAT+AGG | - | chr6.1:68958659-68958678 | MS.gene57835:intron | 15.0% |
| !! | TTTATATAGATGAATGAAAA+CGG | + | chr6.1:68960290-68960309 | None:intergenic | 15.0% |
| !!! | ATAAATTTTTGTCTTTTACT+TGG | - | chr6.1:68960833-68960852 | MS.gene57835:intron | 15.0% |
| !!! | ATTATAATTGTTATTGTCAT+AGG | - | chr6.1:68959004-68959023 | MS.gene57835:intron | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+CGG | + | chr6.1:68958737-68958756 | None:intergenic | 15.0% |
| !! | AAAGAACTTCAAATTTCAAA+TGG | + | chr6.1:68960390-68960409 | None:intergenic | 20.0% |
| !! | AATGTAAACCAAATATATGT+TGG | - | chr6.1:68959170-68959189 | MS.gene57835:intron | 20.0% |
| !! | AATTCAGGTATTATTCTTAT+TGG | - | chr6.1:68960740-68960759 | MS.gene57835:intron | 20.0% |
| !! | ATATATATTTGACCATGTTT+AGG | - | chr6.1:68961596-68961615 | MS.gene57835:intron | 20.0% |
| !! | ATTAACAGGAATAAATCATT+AGG | + | chr6.1:68960701-68960720 | None:intergenic | 20.0% |
| !! | CTATTTGTTTATAACTATTC+AGG | - | chr6.1:68960449-68960468 | MS.gene57835:intron | 20.0% |
| !! | TATATATTTGACCATGTTTA+GGG | - | chr6.1:68961597-68961616 | MS.gene57835:intron | 20.0% |
| !! | TATATTATGAATGACTATTC+AGG | - | chr6.1:68961369-68961388 | MS.gene57835:intron | 20.0% |
| !!! | AAGTTAAGATTTTTTATGTC+AGG | - | chr6.1:68959785-68959804 | MS.gene57835:intron | 20.0% |
| !!! | ACAATTTTAGAAAATAGAAG+TGG | - | chr6.1:68958637-68958656 | MS.gene57835:intron | 20.0% |
| !!! | TTATGGCTTTTGATAAAATT+GGG | - | chr6.1:68959634-68959653 | MS.gene57835:CDS | 20.0% |
| !!! | TTTAGTTTTGAGTTTAATGA+TGG | - | chr6.1:68959369-68959388 | MS.gene57835:CDS | 20.0% |
| !!! | TTTATGGCTTTTGATAAAAT+TGG | - | chr6.1:68959633-68959652 | MS.gene57835:CDS | 20.0% |
| ! | AACAACAGTAAATTGAGAAA+GGG | + | chr6.1:68960245-68960264 | None:intergenic | 25.0% |
| ! | AATGAATATGTACATGATCT+AGG | + | chr6.1:68961913-68961932 | None:intergenic | 25.0% |
| ! | ATAGGTTAATATGTGATGTA+AGG | - | chr6.1:68959022-68959041 | MS.gene57835:intron | 25.0% |
| ! | ATATATTTGACCATGTTTAG+GGG | - | chr6.1:68961598-68961617 | MS.gene57835:intron | 25.0% |
| ! | ATGAATATGTACATGATCTA+GGG | + | chr6.1:68961912-68961931 | None:intergenic | 25.0% |
| ! | ATTATTCTTATTGGAGAGAT+AGG | - | chr6.1:68960749-68960768 | MS.gene57835:intron | 25.0% |
| ! | ATTTGAAAAAGTTTGTCTTG+TGG | - | chr6.1:68960872-68960891 | MS.gene57835:intron | 25.0% |
| ! | CTGATAAAATAATATAGGTG+AGG | + | chr6.1:68960627-68960646 | None:intergenic | 25.0% |
| ! | GAGTTAAATTTAAGTCCATT+AGG | - | chr6.1:68961206-68961225 | MS.gene57835:intron | 25.0% |
| ! | GGCTTCTTATATTAATGTAT+CGG | - | chr6.1:68959759-68959778 | MS.gene57835:intron | 25.0% |
| ! | TAACAACAGTAAATTGAGAA+AGG | + | chr6.1:68960246-68960265 | None:intergenic | 25.0% |
| ! | TAAGGTCTAGTTAAAGAAAA+GGG | - | chr6.1:68959040-68959059 | MS.gene57835:intron | 25.0% |
| ! | TTTACAATCAAGGATGATAT+GGG | - | chr6.1:68961697-68961716 | MS.gene57835:intron | 25.0% |
| ! | TTTGAAAAAGTTTGTCTTGT+GGG | - | chr6.1:68960873-68960892 | MS.gene57835:intron | 25.0% |
| ! | TTTGTCTATTTGTCTATTAG+TGG | - | chr6.1:68959569-68959588 | MS.gene57835:CDS | 25.0% |
| !! | AAATCTTCTTTTGGTGAATA+AGG | - | chr6.1:68961184-68961203 | MS.gene57835:intron | 25.0% |
| !! | AGCAATTTCAGCTTTTATAT+TGG | - | chr6.1:68961882-68961901 | MS.gene57835:CDS | 25.0% |
| !! | AGTGTAATTGTTGTTGTTAT+AGG | - | chr6.1:68958505-68958524 | MS.gene57835:intron | 25.0% |
| !! | ATTGCTTTATTATCATCTGA+AGG | + | chr6.1:68961868-68961887 | None:intergenic | 25.0% |
| !! | TATTTTCTGTTCTATACGAA+AGG | - | chr6.1:68961269-68961288 | MS.gene57835:intron | 25.0% |
| !! | TCTTTTCAACATCAAAAACA+AGG | + | chr6.1:68959987-68960006 | None:intergenic | 25.0% |
| !! | TTTTACAATCAAGGATGATA+TGG | - | chr6.1:68961696-68961715 | MS.gene57835:intron | 25.0% |
| !!! | ATAAAAGACCTGCTTTTTTT+GGG | - | chr6.1:68959539-68959558 | MS.gene57835:intron | 25.0% |
| !!! | ATTGATGTTGAATTTTAGCA+TGG | - | chr6.1:68961562-68961581 | MS.gene57835:intron | 25.0% |
| !!! | GAAGGTACTTAAATAGAAAT+TGG | - | chr6.1:68960926-68960945 | MS.gene57835:intron | 25.0% |
| !!! | TATAAAAGACCTGCTTTTTT+TGG | - | chr6.1:68959538-68959557 | MS.gene57835:intron | 25.0% |
| !!! | TATGATACAGTTTTGTTACA+TGG | - | chr6.1:68960030-68960049 | MS.gene57835:intron | 25.0% |
| !!! | TTCTAAAGTTTTGGAAATGA+TGG | - | chr6.1:68961486-68961505 | MS.gene57835:intron | 25.0% |
| !!! | TTGATGTTGAATTTTAGCAT+GGG | - | chr6.1:68961563-68961582 | MS.gene57835:intron | 25.0% |
| !!! | TTGTTGTTTGTATTACTGAA+GGG | - | chr6.1:68958390-68958409 | MS.gene57835:intron | 25.0% |
| !!! | TTTGATATTTTCAAGCAGAA+AGG | - | chr6.1:68962081-68962100 | MS.gene57835:CDS | 25.0% |
| AAAAGCCATAAACAAACCAA+AGG | + | chr6.1:68959625-68959644 | None:intergenic | 30.0% | |
| AAAATAATATAGGTGAGGTG+AGG | + | chr6.1:68960622-68960641 | None:intergenic | 30.0% | |
| AAAGAACAAACATATGCTCA+TGG | - | chr6.1:68961292-68961311 | MS.gene57835:intron | 30.0% | |
| AAAGGGCAAAATAAGAAAGT+TGG | + | chr6.1:68960228-68960247 | None:intergenic | 30.0% | |
| AACAAACGGTAATGATTAAC+AGG | + | chr6.1:68960715-68960734 | None:intergenic | 30.0% | |
| AATAGCTGCACAAGAAAATA+AGG | + | chr6.1:68961962-68961981 | None:intergenic | 30.0% | |
| ACCTGAATTACACAAACAAA+CGG | + | chr6.1:68960729-68960748 | None:intergenic | 30.0% | |
| ATATCAAACCCAAAAAAAGC+AGG | + | chr6.1:68959550-68959569 | None:intergenic | 30.0% | |
| ATCACAGTTAATGAGCATTA+TGG | + | chr6.1:68961055-68961074 | None:intergenic | 30.0% | |
| ATGTAAAATTGGAATCATGC+CGG | - | chr6.1:68959890-68959909 | MS.gene57835:intron | 30.0% | |
| CGTTATAGGTTAATATGTGT+TGG | - | chr6.1:68958673-68958692 | MS.gene57835:intron | 30.0% | |
| CTAGTTAAAGAAAAGGGTTT+GGG | - | chr6.1:68959046-68959065 | MS.gene57835:intron | 30.0% | |
| CTGCTTGAAAATATCAAACA+TGG | + | chr6.1:68962079-68962098 | None:intergenic | 30.0% | |
| GATTGATCTAGTGAAAGATA+GGG | - | chr6.1:68958540-68958559 | MS.gene57835:intron | 30.0% | |
| GATTGATCTGGTAAAAGATA+GGG | - | chr6.1:68958843-68958862 | MS.gene57835:intron | 30.0% | |
| GTAAGGTCTAGTTAAAGAAA+AGG | - | chr6.1:68959039-68959058 | MS.gene57835:intron | 30.0% | |
| TAATACCATTTAAGAGTCAG+TGG | + | chr6.1:68959125-68959144 | None:intergenic | 30.0% | |
| TATCGTATTATTATCTGTCG+TGG | - | chr6.1:68960169-68960188 | MS.gene57835:intron | 30.0% | |
| TCTAGTTAAAGAAAAGGGTT+TGG | - | chr6.1:68959045-68959064 | MS.gene57835:intron | 30.0% | |
| TCTCAAATTATTAACGGTGT+TGG | + | chr6.1:68958731-68958750 | None:intergenic | 30.0% | |
| TGATTGATCTAGTGAAAGAT+AGG | - | chr6.1:68958539-68958558 | MS.gene57835:intron | 30.0% | |
| TGATTGATCTGGTAAAAGAT+AGG | - | chr6.1:68958842-68958861 | MS.gene57835:intron | 30.0% | |
| TTACAATCAAGGATGATATG+GGG | - | chr6.1:68961698-68961717 | MS.gene57835:intron | 30.0% | |
| TTGAAAAAGTTTGTCTTGTG+GGG | - | chr6.1:68960874-68960893 | MS.gene57835:intron | 30.0% | |
| TTGTCTATTAGTGGAAAACT+GGG | - | chr6.1:68959578-68959597 | MS.gene57835:CDS | 30.0% | |
| TTTGTCTATTAGTGGAAAAC+TGG | - | chr6.1:68959577-68959596 | MS.gene57835:CDS | 30.0% | |
| ! | AACAAAGTTTGTTCCATTGA+AGG | + | chr6.1:68960535-68960554 | None:intergenic | 30.0% |
| ! | ACAAAGTTTGTTCCATTGAA+GGG | + | chr6.1:68960534-68960553 | None:intergenic | 30.0% |
| ! | CGTAGATGTAAATCTTCTTT+TGG | - | chr6.1:68961175-68961194 | MS.gene57835:intron | 30.0% |
| ! | CTTTTCATGAAACAGAGAAA+AGG | - | chr6.1:68960957-68960976 | MS.gene57835:intron | 30.0% |
| ! | GTGATATTTTCTATGATGAC+AGG | + | chr6.1:68961512-68961531 | None:intergenic | 30.0% |
| !! | CTTGTTGTTTGTATTACTGA+AGG | - | chr6.1:68958389-68958408 | MS.gene57835:intron | 30.0% |
| !! | GAGTGTAAAAAAGTTCTAAG+AGG | - | chr6.1:68959419-68959438 | MS.gene57835:intron | 30.0% |
| !! | TGGATTGGGCAATTTATTTT+TGG | - | chr6.1:68959738-68959757 | MS.gene57835:intron | 30.0% |
| !!! | ATGAGCTGTTTTTACAATCA+AGG | - | chr6.1:68961687-68961706 | MS.gene57835:intron | 30.0% |
| AAAGATGTACCTTCTGTTTG+AGG | + | chr6.1:68960585-68960604 | None:intergenic | 35.0% | |
| ACAAATAGATGGCTTATCCA+TGG | + | chr6.1:68960437-68960456 | None:intergenic | 35.0% | |
| ACCGTTTGTTTGTGTAATTC+AGG | - | chr6.1:68960725-68960744 | MS.gene57835:intron | 35.0% | |
| AGACAAGTGCTAATGCTAAT+TGG | + | chr6.1:68961656-68961675 | None:intergenic | 35.0% | |
| AGCATTAGCACTTGTCTTAT+AGG | - | chr6.1:68961659-68961678 | MS.gene57835:intron | 35.0% | |
| AGCTGACACCAACATATATT+TGG | + | chr6.1:68959181-68959200 | None:intergenic | 35.0% | |
| ATAGCTACCATATCATGTTG+AGG | + | chr6.1:68958419-68958438 | None:intergenic | 35.0% | |
| ATCTAGTGAAAGATAGGGTT+AGG | - | chr6.1:68958545-68958564 | MS.gene57835:intron | 35.0% | |
| ATCTGGTAAAAGATAGGGTT+GGG | - | chr6.1:68958848-68958867 | MS.gene57835:intron | 35.0% | |
| ATGCACAGCTAACAATTAAG+AGG | + | chr6.1:68960815-68960834 | None:intergenic | 35.0% | |
| ATTATGTTTCGACTCTGCTA+TGG | + | chr6.1:68960203-68960222 | None:intergenic | 35.0% | |
| ATTCTTATTGGAGAGATAGG+AGG | - | chr6.1:68960752-68960771 | MS.gene57835:intron | 35.0% | |
| CAAATAGATGGCTTATCCAT+GGG | + | chr6.1:68960436-68960455 | None:intergenic | 35.0% | |
| CAATCCAAAACTCGTTTGAT+AGG | - | chr6.1:68959834-68959853 | MS.gene57835:intron | 35.0% | |
| CACCAGTTAATAACACCTAA+TGG | + | chr6.1:68961224-68961243 | None:intergenic | 35.0% | |
| CACCATAGGCAATTTGTAAA+GGG | - | chr6.1:68960090-68960109 | MS.gene57835:intron | 35.0% | |
| CTCCAAAGAGCTAATAGAAA+CGG | + | chr6.1:68961751-68961770 | None:intergenic | 35.0% | |
| TACAATCAAGGATGATATGG+GGG | - | chr6.1:68961699-68961718 | MS.gene57835:intron | 35.0% | |
| TATTCAAACACCCCTAAACA+TGG | + | chr6.1:68961611-68961630 | None:intergenic | 35.0% | |
| TCTAGTGAAAGATAGGGTTA+GGG | - | chr6.1:68958546-68958565 | MS.gene57835:intron | 35.0% | |
| TGAATGACTATTCAGGAAAG+CGG | - | chr6.1:68961376-68961395 | MS.gene57835:intron | 35.0% | |
| TGCACAGCTAACAATTAAGA+GGG | + | chr6.1:68960814-68960833 | None:intergenic | 35.0% | |
| TGGAACTTTGACATATGAAG+CGG | - | chr6.1:68959956-68959975 | MS.gene57835:intron | 35.0% | |
| TGTAAAATTGGAATCATGCC+GGG | - | chr6.1:68959891-68959910 | MS.gene57835:intron | 35.0% | |
| TTATGTTTCGACTCTGCTAT+GGG | + | chr6.1:68960202-68960221 | None:intergenic | 35.0% | |
| TTCCATGTAAGACAACTTCA+GGG | + | chr6.1:68960909-68960928 | None:intergenic | 35.0% | |
| ! | ACTGTTGAGTTTGTTCTAGT+AGG | - | chr6.1:68960006-68960025 | MS.gene57835:intron | 35.0% |
| ! | ATGGTGATCTTTATTTGTGC+TGG | - | chr6.1:68961245-68961264 | MS.gene57835:intron | 35.0% |
| ! | ATTCCAATTTTACATTCCCC+GGG | + | chr6.1:68959885-68959904 | None:intergenic | 35.0% |
| ! | ATTGGAATTGTTTCTCGTTC+TGG | - | chr6.1:68959936-68959955 | MS.gene57835:intron | 35.0% |
| ! | CAAAGTTTGTTCCATTGAAG+GGG | + | chr6.1:68960533-68960552 | None:intergenic | 35.0% |
| ! | CCATTTTCCCAAATTACAAC+CGG | + | chr6.1:68958921-68958940 | None:intergenic | 35.0% |
| ! | CTGTTGAGTTTGTTCTAGTA+GGG | - | chr6.1:68960007-68960026 | MS.gene57835:intron | 35.0% |
| ! | GATTCCAATTTTACATTCCC+CGG | + | chr6.1:68959886-68959905 | None:intergenic | 35.0% |
| ! | GTTGTCTTTTATTGAGTACC+AGG | - | chr6.1:68960345-68960364 | MS.gene57835:intron | 35.0% |
| ! | GTTTCTATTAGCTCTTTGGA+GGG | - | chr6.1:68961750-68961769 | MS.gene57835:CDS | 35.0% |
| !! | AAGTTCTAAGAGGTGAGTTA+TGG | - | chr6.1:68959429-68959448 | MS.gene57835:intron | 35.0% |
| !! | AGGTGTTATTAACTGGTGAA+TGG | - | chr6.1:68961226-68961245 | MS.gene57835:intron | 35.0% |
| !! | ATATGCCACTGACTCTTAAA+TGG | - | chr6.1:68959117-68959136 | MS.gene57835:intron | 35.0% |
| !! | GTCCATTAGGTGTTATTAAC+TGG | - | chr6.1:68961219-68961238 | MS.gene57835:intron | 35.0% |
| !! | TTCATAGGTGTTGATTGATC+TGG | - | chr6.1:68958831-68958850 | MS.gene57835:intron | 35.0% |
| !!! | ATGAGAAGAGTTTTGTTACG+CGG | + | chr6.1:68958052-68958071 | None:intergenic | 35.0% |
| !!! | TTTCCTTGCGTTTTGAGTTT+GGG | - | chr6.1:68959681-68959700 | MS.gene57835:intron | 35.0% |
| AAAAGTTTGTCTTGTGGGGA+AGG | - | chr6.1:68960878-68960897 | MS.gene57835:intron | 40.0% | |
| AAAGTTTGTCTTGTGGGGAA+GGG | - | chr6.1:68960879-68960898 | MS.gene57835:intron | 40.0% | |
| AAGACAAAATCAGCACCCTT+AGG | - | chr6.1:68962007-68962026 | MS.gene57835:CDS | 40.0% | |
| ACAACATTGCGGTTTATGGA+AGG | + | chr6.1:68960119-68960138 | None:intergenic | 40.0% | |
| AGACAAAATCAGCACCCTTA+GGG | - | chr6.1:68962008-68962027 | MS.gene57835:CDS | 40.0% | |
| AGCAAACCCAGAACTAAAGT+TGG | + | chr6.1:68961105-68961124 | None:intergenic | 40.0% | |
| AGGGATTCCTCAACATGATA+TGG | - | chr6.1:68958409-68958428 | MS.gene57835:intron | 40.0% | |
| AGTCACAACATTGCGGTTTA+TGG | + | chr6.1:68960123-68960142 | None:intergenic | 40.0% | |
| ATAATAGCAGCAGCAGCAAA+AGG | + | chr6.1:68958344-68958363 | None:intergenic | 40.0% | |
| ATCCCTGAAGTTGTCTTACA+TGG | - | chr6.1:68960904-68960923 | MS.gene57835:intron | 40.0% | |
| ATTAACTCCCAAGATAAGCC+TGG | + | chr6.1:68960366-68960385 | None:intergenic | 40.0% | |
| ATTGAGTACCAGGCTTATCT+TGG | - | chr6.1:68960355-68960374 | MS.gene57835:intron | 40.0% | |
| ATTGCAAGTGTGCCTGTTAA+AGG | - | chr6.1:68961077-68961096 | MS.gene57835:intron | 40.0% | |
| ATTGCTCATTTGTGAGCCTT+TGG | - | chr6.1:68959606-68959625 | MS.gene57835:CDS | 40.0% | |
| CAAGGAATAACCGGCAAAAA+CGG | - | chr6.1:68958155-68958174 | MS.gene57835:CDS | 40.0% | |
| CATAGGCAATTTGTAAAGGG+AGG | - | chr6.1:68960093-68960112 | MS.gene57835:intron | 40.0% | |
| CCACCATAGGCAATTTGTAA+AGG | - | chr6.1:68960089-68960108 | MS.gene57835:intron | 40.0% | |
| CCAGCAATAAATGCAACAAC+AGG | + | chr6.1:68961412-68961431 | None:intergenic | 40.0% | |
| CCGGTTGTAATTTGGGAAAA+TGG | - | chr6.1:68958918-68958937 | MS.gene57835:intron | 40.0% | |
| CCTGTTGTTGCATTTATTGC+TGG | - | chr6.1:68961409-68961428 | MS.gene57835:intron | 40.0% | |
| CCTTTACAAATTGCCTATGG+TGG | + | chr6.1:68960092-68960111 | None:intergenic | 40.0% | |
| CTAAAGTTGGGACCTTTAAC+AGG | + | chr6.1:68961092-68961111 | None:intergenic | 40.0% | |
| CTCCCTTTACAAATTGCCTA+TGG | + | chr6.1:68960095-68960114 | None:intergenic | 40.0% | |
| CTGAAGTTGTCTTACATGGA+AGG | - | chr6.1:68960908-68960927 | MS.gene57835:intron | 40.0% | |
| CTTCCATGTAAGACAACTTC+AGG | + | chr6.1:68960910-68960929 | None:intergenic | 40.0% | |
| GAATACGGAACGAATATGGT+TGG | - | chr6.1:68958203-68958222 | MS.gene57835:intron | 40.0% | |
| GAATGACTATTCAGGAAAGC+GGG | - | chr6.1:68961377-68961396 | MS.gene57835:intron | 40.0% | |
| GATCGAATACGGAACGAATA+TGG | - | chr6.1:68958199-68958218 | MS.gene57835:intron | 40.0% | |
| GATCTGCTAGGAACTTTGTA+AGG | + | chr6.1:68960563-68960582 | None:intergenic | 40.0% | |
| GATCTGGTAAAAGATAGGGT+TGG | - | chr6.1:68958847-68958866 | MS.gene57835:intron | 40.0% | |
| GCAAACCCAGAACTAAAGTT+GGG | + | chr6.1:68961104-68961123 | None:intergenic | 40.0% | |
| GCACAAACACTCTTCAGATT+AGG | + | chr6.1:68958811-68958830 | None:intergenic | 40.0% | |
| GGAGAATAGATGTGAGAACA+AGG | + | chr6.1:68961034-68961053 | None:intergenic | 40.0% | |
| GGAGGGTGAGAACAATTTAT+GGG | - | chr6.1:68961767-68961786 | MS.gene57835:CDS | 40.0% | |
| GTGATCTGTCAAGGAATAAC+CGG | - | chr6.1:68958146-68958165 | MS.gene57835:CDS | 40.0% | |
| GTTTACCAAACAACTGCTGT+TGG | - | chr6.1:68960471-68960490 | MS.gene57835:intron | 40.0% | |
| TATGTTTCGACTCTGCTATG+GGG | + | chr6.1:68960201-68960220 | None:intergenic | 40.0% | |
| TATTATGGAAGCGGTTGAAG+CGG | - | chr6.1:68958358-68958377 | MS.gene57835:intron | 40.0% | |
| TCCGCAACAGAATTGAAAAC+CGG | + | chr6.1:68958272-68958291 | None:intergenic | 40.0% | |
| TCTGGTAAAAGATAGGGTTG+GGG | - | chr6.1:68958849-68958868 | MS.gene57835:intron | 40.0% | |
| TGGAGGGTGAGAACAATTTA+TGG | - | chr6.1:68961766-68961785 | MS.gene57835:CDS | 40.0% | |
| TTGAGTACCAGGCTTATCTT+GGG | - | chr6.1:68960356-68960375 | MS.gene57835:intron | 40.0% | |
| TTTAACAGGCACACTTGCAA+TGG | + | chr6.1:68961078-68961097 | None:intergenic | 40.0% | |
| TTTGATGCATACAGCACGAT+TGG | - | chr6.1:68960408-68960427 | MS.gene57835:intron | 40.0% | |
| ! | AAAGGTCCCAACTTTAGTTC+TGG | - | chr6.1:68961095-68961114 | MS.gene57835:intron | 40.0% |
| ! | CGTTTCTATTAGCTCTTTGG+AGG | - | chr6.1:68961749-68961768 | MS.gene57835:CDS | 40.0% |
| ! | GTAGACACCGGTTGTAATTT+GGG | - | chr6.1:68958911-68958930 | MS.gene57835:intron | 40.0% |
| ! | TAGGTGCTACATGCAAACTA+GGG | - | chr6.1:68959260-68959279 | MS.gene57835:intron | 40.0% |
| ! | TCCGGTTTTCAATTCTGTTG+CGG | - | chr6.1:68958268-68958287 | MS.gene57835:intron | 40.0% |
| ! | TGCCGTTTCTATTAGCTCTT+TGG | - | chr6.1:68961746-68961765 | MS.gene57835:CDS | 40.0% |
| ! | TGGTCCTATCAAACGAGTTT+TGG | + | chr6.1:68959841-68959860 | None:intergenic | 40.0% |
| ! | TGTAGACACCGGTTGTAATT+TGG | - | chr6.1:68958910-68958929 | MS.gene57835:intron | 40.0% |
| ! | TTTTGCTGCTGCTGCTATTA+TGG | - | chr6.1:68958343-68958362 | MS.gene57835:intron | 40.0% |
| !! | AACTTTAGTTCTGGGTTTGC+TGG | - | chr6.1:68961104-68961123 | MS.gene57835:intron | 40.0% |
| !! | AAGGTCCCAACTTTAGTTCT+GGG | - | chr6.1:68961096-68961115 | MS.gene57835:intron | 40.0% |
| !! | GAAGAGTGTTTGTGCTTCAT+AGG | - | chr6.1:68958816-68958835 | MS.gene57835:intron | 40.0% |
| !! | GTGAGCCTTTGGTTTGTTTA+TGG | - | chr6.1:68959617-68959636 | MS.gene57835:CDS | 40.0% |
| !! | GTTTTGTTACATGGAAGCCA+CGG | - | chr6.1:68960039-68960058 | MS.gene57835:intron | 40.0% |
| !!! | GTTTCCTTGCGTTTTGAGTT+TGG | - | chr6.1:68959680-68959699 | MS.gene57835:intron | 40.0% |
| AAAGGCGGAACGGAACATTT+AGG | - | chr6.1:68958242-68958261 | MS.gene57835:intron | 45.0% | |
| AAGCCCGGGGAATGTAAAAT+TGG | - | chr6.1:68959879-68959898 | MS.gene57835:intron | 45.0% | |
| AAGGCGGAACGGAACATTTA+GGG | - | chr6.1:68958243-68958262 | MS.gene57835:intron | 45.0% | |
| ACCGAACAAGCGATCGAATA+CGG | - | chr6.1:68958188-68958207 | MS.gene57835:intron | 45.0% | |
| AGCCAGTTGCTTCATGGATT+GGG | - | chr6.1:68959724-68959743 | MS.gene57835:intron | 45.0% | |
| ATGCCCAAACTCAAAACGCA+AGG | + | chr6.1:68959687-68959706 | None:intergenic | 45.0% | |
| ATGTTTCGACTCTGCTATGG+GGG | + | chr6.1:68960200-68960219 | None:intergenic | 45.0% | |
| CCAGGTTTGTGAATGTAACC+CGG | + | chr6.1:68959912-68959931 | None:intergenic | 45.0% | |
| CGGGTTACATTCACAAACCT+GGG | - | chr6.1:68959910-68959929 | MS.gene57835:intron | 45.0% | |
| CTAGCAGATCCTCAAACAGA+AGG | - | chr6.1:68960573-68960592 | MS.gene57835:intron | 45.0% | |
| CTTCTGTTTGAGGATCTGCT+AGG | + | chr6.1:68960575-68960594 | None:intergenic | 45.0% | |
| CTTGGACAATCCACATGTGT+GGG | - | chr6.1:68960495-68960514 | MS.gene57835:intron | 45.0% | |
| GATGTGCAGTCACAACATTG+CGG | + | chr6.1:68960130-68960149 | None:intergenic | 45.0% | |
| GATTAGGCGTGTACACGTAT+CGG | + | chr6.1:68958795-68958814 | None:intergenic | 45.0% | |
| GCACCTACATGTCACATCAA+AGG | + | chr6.1:68959247-68959266 | None:intergenic | 45.0% | |
| GCACCTTTGATGTGACATGT+AGG | - | chr6.1:68959241-68959260 | MS.gene57835:intron | 45.0% | |
| TACAAATTGCCTATGGTGGC+TGG | + | chr6.1:68960088-68960107 | None:intergenic | 45.0% | |
| TACACTAGCCAGTTGCTTCA+TGG | - | chr6.1:68959718-68959737 | MS.gene57835:intron | 45.0% | |
| TACGGAACGAATATGGTTGG+CGG | - | chr6.1:68958206-68958225 | MS.gene57835:intron | 45.0% | |
| TAGCCAGTTGCTTCATGGAT+TGG | - | chr6.1:68959723-68959742 | MS.gene57835:intron | 45.0% | |
| TCCGTATTCGATCGCTTGTT+CGG | + | chr6.1:68958192-68958211 | None:intergenic | 45.0% | |
| TCTTGTGCAGCTATTGTGTC+AGG | - | chr6.1:68961967-68961986 | MS.gene57835:CDS | 45.0% | |
| TGCTGCTGCTATTATGGAAG+CGG | - | chr6.1:68958349-68958368 | MS.gene57835:intron | 45.0% | |
| TGGGGTTATGGACATGCAAA+AGG | - | chr6.1:68961130-68961149 | MS.gene57835:intron | 45.0% | |
| ! | AACGGAACATTTAGGGCTTC+CGG | - | chr6.1:68958250-68958269 | MS.gene57835:intron | 45.0% |
| ! | GTAGGTGCTACATGCAAACT+AGG | - | chr6.1:68959259-68959278 | MS.gene57835:intron | 45.0% |
| ! | TTGATGATACCAGGGCAGTT+TGG | + | chr6.1:68959861-68959880 | None:intergenic | 45.0% |
| !! | ATGGCAGCTCCAATTTTAGC+TGG | + | chr6.1:68962060-68962079 | None:intergenic | 45.0% |
| !! | GTGAAACGTTCCGTTTTTGC+CGG | + | chr6.1:68958168-68958187 | None:intergenic | 45.0% |
| !!! | AGAAGAGTTTTGTTACGCGG+TGG | + | chr6.1:68958049-68958068 | None:intergenic | 45.0% |
| !!! | GGATTTTTTCCAGCCACCAT+AGG | - | chr6.1:68960076-68960095 | MS.gene57835:intron | 45.0% |
| !!! | TGGCAGCTCCAATTTTAGCT+GGG | + | chr6.1:68962059-68962078 | None:intergenic | 45.0% |
| AAGGGGTGGTTGAAAAGCTG+CGG | + | chr6.1:68958094-68958113 | None:intergenic | 50.0% | |
| AGCTATTGTGTCAGGTGGCA+AGG | - | chr6.1:68961975-68961994 | MS.gene57835:CDS | 50.0% | |
| ATAGCAGCAGCAGCAAAAGG+AGG | + | chr6.1:68958341-68958360 | None:intergenic | 50.0% | |
| ATTCACAAACCTGGGCGCAT+TGG | - | chr6.1:68959918-68959937 | MS.gene57835:intron | 50.0% | |
| ATTGGAGGAGACCCCTTCAA+TGG | - | chr6.1:68960519-68960538 | MS.gene57835:intron | 50.0% | |
| CAAGGCCAACAGCAGTTGTT+TGG | + | chr6.1:68960479-68960498 | None:intergenic | 50.0% | |
| CAATCCACATGTGTGGGCAT+TGG | - | chr6.1:68960501-68960520 | MS.gene57835:intron | 50.0% | |
| CCGGGTTACATTCACAAACC+TGG | - | chr6.1:68959909-68959928 | MS.gene57835:intron | 50.0% | |
| CCTTGGACAATCCACATGTG+TGG | - | chr6.1:68960494-68960513 | MS.gene57835:intron | 50.0% | |
| GAAACAATTCCAATGCGCCC+AGG | + | chr6.1:68959930-68959949 | None:intergenic | 50.0% | |
| GATAGGAGGAACTGCAGAAG+AGG | - | chr6.1:68960766-68960785 | MS.gene57835:intron | 50.0% | |
| GCACACACACATGTAGACAC+CGG | - | chr6.1:68958899-68958918 | MS.gene57835:intron | 50.0% | |
| GCTATTGTGTCAGGTGGCAA+GGG | - | chr6.1:68961976-68961995 | MS.gene57835:CDS | 50.0% | |
| GGACGCTGCTGCTCTAATTA+AGG | - | chr6.1:68960787-68960806 | MS.gene57835:intron | 50.0% | |
| GTGCTACATGCAAACTAGGG+TGG | - | chr6.1:68959263-68959282 | MS.gene57835:intron | 50.0% | |
| GTGGAGTCCCCAGCTAAAAT+TGG | - | chr6.1:68962048-68962067 | MS.gene57835:CDS | 50.0% | |
| TACAGCACGATTGGTACCCA+TGG | - | chr6.1:68960417-68960436 | MS.gene57835:intron | 50.0% | |
| TACTCCGAAGAAAGGCGGAA+CGG | - | chr6.1:68958232-68958251 | MS.gene57835:intron | 50.0% | |
| TGCCCAATCCATGAAGCAAC+TGG | + | chr6.1:68959729-68959748 | None:intergenic | 50.0% | |
| TGTGCAGCTATTGTGTCAGG+TGG | - | chr6.1:68961970-68961989 | MS.gene57835:CDS | 50.0% | |
| TGTTCCGTTCCGCCTTTCTT+CGG | + | chr6.1:68958239-68958258 | None:intergenic | 50.0% | |
| TTGATAGGACCAAACTGCCC+TGG | - | chr6.1:68959849-68959868 | MS.gene57835:intron | 50.0% | |
| ! | CAAACAACTGCTGTTGGCCT+TGG | - | chr6.1:68960477-68960496 | MS.gene57835:intron | 50.0% |
| ! | CCACACATGTGGATTGTCCA+AGG | + | chr6.1:68960497-68960516 | None:intergenic | 50.0% |
| !! | AGTTCTGGGTTTGCTGGTAG+TGG | - | chr6.1:68961110-68961129 | MS.gene57835:intron | 50.0% |
| !! | GGTGTTACTCCGAAGAAAGG+CGG | - | chr6.1:68958227-68958246 | MS.gene57835:intron | 50.0% |
| !! | GTTCTGGGTTTGCTGGTAGT+GGG | - | chr6.1:68961111-68961130 | MS.gene57835:intron | 50.0% |
| !! | GTTTGCTGGTAGTGGGGTTA+TGG | - | chr6.1:68961118-68961137 | MS.gene57835:intron | 50.0% |
| !! | TTCTGGGTTTGCTGGTAGTG+GGG | - | chr6.1:68961112-68961131 | MS.gene57835:intron | 50.0% |
| !!! | GGCAGCTCCAATTTTAGCTG+GGG | + | chr6.1:68962058-68962077 | None:intergenic | 50.0% |
| AGCACACGCGTGATCTGTCA+AGG | - | chr6.1:68958137-68958156 | MS.gene57835:CDS | 55.0% | |
| TAGGGTTGGGGTGACTACGA+TGG | - | chr6.1:68958861-68958880 | MS.gene57835:intron | 55.0% | |
| TCCTCCAATGCCCACACATG+TGG | + | chr6.1:68960508-68960527 | None:intergenic | 55.0% | |
| TGAAAAGCTGCGGCGGTTGT+TGG | + | chr6.1:68958084-68958103 | None:intergenic | 55.0% | |
| TGCCCTGGTATCATCAAGCC+CGG | - | chr6.1:68959864-68959883 | MS.gene57835:intron | 55.0% | |
| ! | CTTTTGTCGACGAACACCGC+GGG | + | chr6.1:68958119-68958138 | None:intergenic | 55.0% |
| ! | GCTTTTGTCGACGAACACCG+CGG | + | chr6.1:68958120-68958139 | None:intergenic | 55.0% |
| ! | TTTTGTCGACGAACACCGCG+GGG | + | chr6.1:68958118-68958137 | None:intergenic | 55.0% |
| !! | GGCGGTGTTACTCCGAAGAA+AGG | - | chr6.1:68958224-68958243 | MS.gene57835:intron | 55.0% |
| !! | TCCACATGTGTGGGCATTGG+AGG | - | chr6.1:68960504-68960523 | MS.gene57835:intron | 55.0% |
| AAAGCTGCGGCGGTTGTTGG+AGG | + | chr6.1:68958081-68958100 | None:intergenic | 60.0% | |
| CCCTGGTATCATCAAGCCCG+GGG | - | chr6.1:68959866-68959885 | MS.gene57835:intron | 60.0% | |
| CTCCAGCGTGTCCCATACGA+CGG | + | chr6.1:68961453-68961472 | None:intergenic | 60.0% | |
| GCAGCAGCAGCAAAAGGAGG+AGG | + | chr6.1:68958338-68958357 | None:intergenic | 60.0% | |
| GCCCTGGTATCATCAAGCCC+GGG | - | chr6.1:68959865-68959884 | MS.gene57835:intron | 60.0% | |
| GCTGGATTAACTGCTCCCCC+TGG | - | chr6.1:68961427-68961446 | MS.gene57835:intron | 60.0% | |
| GGAAGCGGTTGAAGCGGAGT+TGG | - | chr6.1:68958364-68958383 | MS.gene57835:intron | 60.0% | |
| GGGTGGTTGAAAAGCTGCGG+CGG | + | chr6.1:68958091-68958110 | None:intergenic | 60.0% | |
| TCCAACACGACACTCTGCCG+TGG | + | chr6.1:68960059-68960078 | None:intergenic | 60.0% | |
| TTTGTCGACGAACACCGCGG+GGG | + | chr6.1:68958117-68958136 | None:intergenic | 60.0% | |
| ! | CCCCGGGCTTGATGATACCA+GGG | + | chr6.1:68959869-68959888 | None:intergenic | 60.0% |
| ! | TCCCCGGGCTTGATGATACC+AGG | + | chr6.1:68959870-68959889 | None:intergenic | 60.0% |
| CGTCGTATGGGACACGCTGG+AGG | - | chr6.1:68961451-68961470 | MS.gene57835:intron | 65.0% | |
| CGTGTCCCATACGACGGCCA+GGG | + | chr6.1:68961447-68961466 | None:intergenic | 65.0% | |
| GTGTCCCATACGACGGCCAG+GGG | + | chr6.1:68961446-68961465 | None:intergenic | 65.0% | |
| TGTCCCATACGACGGCCAGG+GGG | + | chr6.1:68961445-68961464 | None:intergenic | 65.0% | |
| TTCAACCACCCCTTCCCCCG+CGG | - | chr6.1:68958100-68958119 | MS.gene57835:CDS | 65.0% | |
| !! | GCCACGGCAGAGTGTCGTGT+TGG | - | chr6.1:68960055-68960074 | MS.gene57835:intron | 65.0% |
| CGACGAACACCGCGGGGGAA+GGG | + | chr6.1:68958112-68958131 | None:intergenic | 70.0% | |
| GACGAACACCGCGGGGGAAG+GGG | + | chr6.1:68958111-68958130 | None:intergenic | 70.0% | |
| GCGTGTCCCATACGACGGCC+AGG | + | chr6.1:68961448-68961467 | None:intergenic | 70.0% | |
| GCTCCCCCTGGCCGTCGTAT+GGG | - | chr6.1:68961439-68961458 | MS.gene57835:intron | 70.0% | |
| GGCCGTCGTATGGGACACGC+TGG | - | chr6.1:68961448-68961467 | MS.gene57835:intron | 70.0% | |
| TCGACGAACACCGCGGGGGA+AGG | + | chr6.1:68958113-68958132 | None:intergenic | 70.0% | |
| TGCTCCCCCTGGCCGTCGTA+TGG | - | chr6.1:68961438-68961457 | MS.gene57835:intron | 70.0% | |
| GAACACCGCGGGGGAAGGGG+TGG | + | chr6.1:68958108-68958127 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 68958038 | 68962116 | 68958038 | ID=MS.gene57835 |
| chr6.1 | mRNA | 68958038 | 68962116 | 68958038 | ID=MS.gene57835.t1;Parent=MS.gene57835 |
| chr6.1 | exon | 68961724 | 68962116 | 68961724 | ID=MS.gene57835.t1.exon1;Parent=MS.gene57835.t1 |
| chr6.1 | CDS | 68961724 | 68962116 | 68961724 | ID=cds.MS.gene57835.t1;Parent=MS.gene57835.t1 |
| chr6.1 | exon | 68960177 | 68960347 | 68960177 | ID=MS.gene57835.t1.exon2;Parent=MS.gene57835.t1 |
| chr6.1 | CDS | 68960177 | 68960347 | 68960177 | ID=cds.MS.gene57835.t1;Parent=MS.gene57835.t1 |
| chr6.1 | exon | 68959560 | 68959683 | 68959560 | ID=MS.gene57835.t1.exon3;Parent=MS.gene57835.t1 |
| chr6.1 | CDS | 68959560 | 68959683 | 68959560 | ID=cds.MS.gene57835.t1;Parent=MS.gene57835.t1 |
| chr6.1 | exon | 68959346 | 68959407 | 68959346 | ID=MS.gene57835.t1.exon4;Parent=MS.gene57835.t1 |
| chr6.1 | CDS | 68959346 | 68959407 | 68959346 | ID=cds.MS.gene57835.t1;Parent=MS.gene57835.t1 |
| chr6.1 | exon | 68958682 | 68958763 | 68958682 | ID=MS.gene57835.t1.exon5;Parent=MS.gene57835.t1 |
| chr6.1 | CDS | 68958682 | 68958763 | 68958682 | ID=cds.MS.gene57835.t1;Parent=MS.gene57835.t1 |
| chr6.1 | exon | 68958038 | 68958177 | 68958038 | ID=MS.gene57835.t1.exon6;Parent=MS.gene57835.t1 |
| chr6.1 | CDS | 68958038 | 68958177 | 68958038 | ID=cds.MS.gene57835.t1;Parent=MS.gene57835.t1 |
| Gene Sequence |
| Protein sequence |
