AlfalfaGEDB | MS.gene58059

M. sativa cultivar XinJiangDaYe / MS.gene58059

KEGG: K00737
GO: GO:0003674 GO:0003824 GO:0003830 GO:0005575 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0009987 GO:0016020 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070085 GO:0071704 GO:0110165 GO:0140096 GO:0140103 GO:1901564
PFAM: PF04724.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58059.t1	XP_003609384.2	97.9	281	6	0	52	332	83	363	3.30E-161	577.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58059.t1	Q02527	26.3	315	168	12	52	323	209	502	1.4e-16	88.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58059.t1	G7JE73	97.9	281	6	0	52	332	83	363	2.3e-161	577.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene060342	MS.gene58059	0.939698	8.20E-100	-1.69E-46
MS.gene060343	MS.gene58059	0.863772	1.96E-64	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene58059.t1	MTR_4g115070	91.176	34	3	0	19	52	50	83	6.42e-15	75.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 88 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCAAATCTTTCCTCGTTTA+TGG	0.078504	8.3:+12250816	None:intergenic
TCTCAACTCAAGATGCATTA+TGG	0.224726	8.3:+12250570	None:intergenic
GCCCGAAGAATACTCCTTTC+AGG	0.283433	8.3:-12250269	MS.gene58059:CDS
GATCATCTCCCTTGCAAATA+AGG	0.299752	8.3:+12250305	None:intergenic
CTATTTCTTCCGACCACTTT+GGG	0.317853	8.3:-12251090	MS.gene58059:CDS
ATGGCAAAGAAAAGAGGTTT+TGG	0.319405	8.3:+12250835	None:intergenic
CCAAAGTGGTCGGAAGAAAT+AGG	0.327997	8.3:+12251091	None:intergenic
AAATTTAAGTTCCTTCTTCC+TGG	0.329293	8.3:-12250166	MS.gene58059:CDS
GACCACCTTTGCCACCTTCA+TGG	0.344267	8.3:-12251007	MS.gene58059:CDS
CTCAACTCAAGATGCATTAT+GGG	0.348786	8.3:+12250571	None:intergenic
GGAAGAAATAGGTTACCTTT+TGG	0.365818	8.3:+12251102	None:intergenic
ACCTTTGCCACCTTCATGGC+TGG	0.368278	8.3:-12251003	MS.gene58059:CDS
TTATGCCGAAAATGTCTCTA+TGG	0.384733	8.3:-12251029	MS.gene58059:CDS
TAGACTTGCTAGAAATTAGA+TGG	0.388968	8.3:-12250924	MS.gene58059:CDS
CTTGAATTCTTGAATGACTA+AGG	0.393185	8.3:+12250329	None:intergenic
CTCCTGAAAGGAGTATTCTT+CGG	0.405596	8.3:+12250267	None:intergenic
TAGTGAGGTATGCTTGTAAA+GGG	0.411770	8.3:+12251052	None:intergenic
TCCTGAAAGGAGTATTCTTC+GGG	0.415421	8.3:+12250268	None:intergenic
CCTATTTCTTCCGACCACTT+TGG	0.431881	8.3:-12251091	MS.gene58059:CDS
ACGGTCCCCGGTCTAATTAC+CGG	0.446231	8.3:-12250483	MS.gene58059:CDS
CGCCAGCTGTTGTAGTCCAC+AGG	0.447034	8.3:+12250523	None:intergenic
ACGGTGTAACAATGTATTCA+TGG	0.463984	8.3:+12250693	None:intergenic
GTCTTGACTCTAGCACGAAT+GGG	0.466686	8.3:+12250725	None:intergenic
TGAAGAAGTTTCAAAGTATG+AGG	0.469432	8.3:+12250613	None:intergenic
AGTTTCAAAGTATGAGGACT+TGG	0.479637	8.3:+12250619	None:intergenic
AATGCCTGTGAACGTGGTAT+TGG	0.487756	8.3:+12250858	None:intergenic
AATTCAAGACCTTATTTGCA+AGG	0.500490	8.3:-12250314	MS.gene58059:CDS
CTGAGAAGATAACATCGGTC+TGG	0.501527	8.3:+12250452	None:intergenic
ATAGTGAGGTATGCTTGTAA+AGG	0.504430	8.3:+12251051	None:intergenic
GTTGTCCACGACTTGTATCC+TGG	0.508526	8.3:-12250778	MS.gene58059:CDS
GAGTCCAATACCACGTTCAC+AGG	0.510681	8.3:-12250862	MS.gene58059:CDS
TGTCTTGACTCTAGCACGAA+TGG	0.512756	8.3:+12250724	None:intergenic
GCCACGCCGACCGTGTGAAA+CGG	0.512900	8.3:-12250360	MS.gene58059:CDS
AATTGCATCGTAAATGCGGC+GGG	0.517000	8.3:+12250963	None:intergenic
TTAAACATCCTCCAGGAAGA+AGG	0.517288	8.3:+12250155	None:intergenic
AAACTTCTTCAGTGGTGCGA+TGG	0.521118	8.3:-12250601	MS.gene58059:CDS
TCGTTTATGGCAAAGAAAAG+AGG	0.522502	8.3:+12250829	None:intergenic
CATCGGTCTGGCGCGAATGC+CGG	0.524753	8.3:+12250464	None:intergenic
ACCAGCCATGAAGGTGGCAA+AGG	0.530710	8.3:+12251002	None:intergenic
CGAATGCCGGTAATTAGACC+GGG	0.532797	8.3:+12250477	None:intergenic
GCGAATGCCGGTAATTAGAC+CGG	0.534546	8.3:+12250476	None:intergenic
AATACATTGTTACACCGTGC+GGG	0.535414	8.3:-12250688	MS.gene58059:CDS
ATTCAAGACCTTATTTGCAA+GGG	0.538163	8.3:-12250313	MS.gene58059:CDS
ATACTTTGAAACTTCTTCAG+TGG	0.541887	8.3:-12250609	MS.gene58059:CDS
CAGCCCATGTCTACGGTCCC+CGG	0.543615	8.3:-12250495	MS.gene58059:CDS
CGAGCGACAGCCCATGTCTA+CGG	0.544052	8.3:-12250502	MS.gene58059:CDS
TGCGAAGGGACCAGCCATGA+AGG	0.548005	8.3:+12250993	None:intergenic
CCACGGACTGCAACTCGACC+AGG	0.553739	8.3:+12250760	None:intergenic
CGGTGATATTCTTCTAATGT+CGG	0.554646	8.3:-12250656	MS.gene58059:CDS
AATACCTCGTTCAGCTTCTG+CGG	0.557017	8.3:-12250224	MS.gene58059:CDS
CACCGTGCGGGGATTTCCAA+CGG	0.563483	8.3:-12250676	MS.gene58059:CDS
AGCCATGAAGGTGGCAAAGG+TGG	0.565950	8.3:+12251005	None:intergenic
GGTCTTCTTAAACATCCTCC+AGG	0.565958	8.3:+12250148	None:intergenic
TCCCTGTGGACTACAACAGC+TGG	0.568994	8.3:-12250525	MS.gene58059:CDS
TTGCATCGTAAATGCGGCGG+GGG	0.574327	8.3:+12250965	None:intergenic
TGCAGTCCGTGGATCAAATG+AGG	0.578637	8.3:-12250749	MS.gene58059:CDS
CCTGGTCGAGTTGCAGTCCG+TGG	0.579017	8.3:-12250760	MS.gene58059:CDS
TTATCTTCTCAGACGCGGGA+TGG	0.582193	8.3:-12250441	MS.gene58059:CDS
GATGTTATCTTCTCAGACGC+GGG	0.583396	8.3:-12250445	MS.gene58059:CDS
TAGACCGGGGACCGTAGACA+TGG	0.590389	8.3:+12250491	None:intergenic
AGATAATTGCATCGTAAATG+CGG	0.593043	8.3:+12250959	None:intergenic
CATTAGAAGAATATCACCGT+TGG	0.601464	8.3:+12250660	None:intergenic
GTGAGGTATGCTTGTAAAGG+GGG	0.609802	8.3:+12251054	None:intergenic
GGAAAGACCTCCGTTTCACA+CGG	0.611357	8.3:+12250350	None:intergenic
GCTAGAGTCAAGACAACGCA+GGG	0.613605	8.3:-12250716	MS.gene58059:CDS
ATGGGTCCTCATTTGATCCA+CGG	0.613838	8.3:+12250743	None:intergenic
AGACCTCCGTTTCACACGGT+CGG	0.622233	8.3:+12250354	None:intergenic
TCCGTTTCACACGGTCGGCG+TGG	0.626436	8.3:+12250359	None:intergenic
ATACATTGTTACACCGTGCG+GGG	0.628594	8.3:-12250687	MS.gene58059:CDS
AACTCAAGATGCATTATGGG+AGG	0.632104	8.3:+12250574	None:intergenic
TTTAAGTTCCTTCTTCCTGG+AGG	0.633535	8.3:-12250163	MS.gene58059:CDS
TGAACGTGGTATTGGACTCG+AGG	0.635964	8.3:+12250866	None:intergenic
AGTGAGGTATGCTTGTAAAG+GGG	0.640883	8.3:+12251053	None:intergenic
CGATGTTATCTTCTCAGACG+CGG	0.644839	8.3:-12250446	MS.gene58059:CDS
TGCTAGAGTCAAGACAACGC+AGG	0.645127	8.3:-12250717	MS.gene58059:CDS
GTATTCATTTGAGTTCCCTG+TGG	0.649334	8.3:-12250539	MS.gene58059:CDS
TAATTGCATCGTAAATGCGG+CGG	0.652775	8.3:+12250962	None:intergenic
CTCGACCAGGATACAAGTCG+TGG	0.653254	8.3:+12250773	None:intergenic
GAAGGGACCAGCCATGAAGG+TGG	0.662736	8.3:+12250996	None:intergenic
ACGCCGACCGTGTGAAACGG+AGG	0.662932	8.3:-12250357	MS.gene58059:CDS
ATTGCATCGTAAATGCGGCG+GGG	0.673930	8.3:+12250964	None:intergenic
AGACCGGGGACCGTAGACAT+GGG	0.678926	8.3:+12250492	None:intergenic
GCCAGCTGTTGTAGTCCACA+GGG	0.679316	8.3:+12250524	None:intergenic
CACCGTTGGAAATCCCCGCA+CGG	0.683745	8.3:+12250674	None:intergenic
GAATACATTGTTACACCGTG+CGG	0.705399	8.3:-12250689	MS.gene58059:CDS
TGAACCGCAGAAGCTGAACG+AGG	0.716712	8.3:+12250220	None:intergenic
CGCGTCTGAGAAGATAACAT+CGG	0.723208	8.3:+12250447	None:intergenic
GAATGCCGGTAATTAGACCG+GGG	0.739409	8.3:+12250478	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AGATAATTGCATCGTAAATG+CGG	+	chr8.3:12250303-12250322	None:intergenic	30.0%
	CTTGAATTCTTGAATGACTA+AGG	+	chr8.3:12250933-12250952	None:intergenic	30.0%
	TGAAGAAGTTTCAAAGTATG+AGG	+	chr8.3:12250649-12250668	None:intergenic	30.0%
!	AAATTTAAGTTCCTTCTTCC+TGG	-	chr8.3:12251093-12251112	MS.gene58059:CDS	30.0%
!	AATTCAAGACCTTATTTGCA+AGG	-	chr8.3:12250945-12250964	MS.gene58059:CDS	30.0%
!	AATTTTTATCCATGGCCAAA+AGG	-	chr8.3:12250142-12250161	MS.gene58059:CDS	30.0%
!	AGGAGTTGATTAAAAAGATG+GGG	-	chr8.3:12251010-12251029	MS.gene58059:CDS	30.0%
!	ATTCAAGACCTTATTTGCAA+GGG	-	chr8.3:12250946-12250965	MS.gene58059:CDS	30.0%
!	CAGGAGTTGATTAAAAAGAT+GGG	-	chr8.3:12251009-12251028	MS.gene58059:CDS	30.0%
!	CATTTTCTATCAAGTAAGCT+GGG	+	chr8.3:12251068-12251087	None:intergenic	30.0%
!	CTTTTTAATCAACTCCTGAA+AGG	+	chr8.3:12251007-12251026	None:intergenic	30.0%
!	TCAGGAGTTGATTAAAAAGA+TGG	-	chr8.3:12251008-12251027	MS.gene58059:CDS	30.0%
!!	ATACTTTGAAACTTCTTCAG+TGG	-	chr8.3:12250650-12250669	MS.gene58059:CDS	30.0%
!!	ATCACAAATTTTGACACGTA+TGG	+	chr8.3:12250373-12250392	None:intergenic	30.0%
!!	TAGACTTGCTAGAAATTAGA+TGG	-	chr8.3:12250335-12250354	MS.gene58059:CDS	30.0%
	ACGGTGTAACAATGTATTCA+TGG	+	chr8.3:12250569-12250588	None:intergenic	35.0%
	AGTTTCAAAGTATGAGGACT+TGG	+	chr8.3:12250643-12250662	None:intergenic	35.0%
	ATAGTGAGGTATGCTTGTAA+AGG	+	chr8.3:12250211-12250230	None:intergenic	35.0%
	CATTAGAAGAATATCACCGT+TGG	+	chr8.3:12250602-12250621	None:intergenic	35.0%
	CGGTGATATTCTTCTAATGT+CGG	-	chr8.3:12250603-12250622	MS.gene58059:CDS	35.0%
	CTCAACTCAAGATGCATTAT+GGG	+	chr8.3:12250691-12250710	None:intergenic	35.0%
	TAGTGAGGTATGCTTGTAAA+GGG	+	chr8.3:12250210-12250229	None:intergenic	35.0%
	TCGTTTATGGCAAAGAAAAG+AGG	+	chr8.3:12250433-12250452	None:intergenic	35.0%
	TCTCAACTCAAGATGCATTA+TGG	+	chr8.3:12250692-12250711	None:intergenic	35.0%
	TGCAAATCTTTCCTCGTTTA+TGG	+	chr8.3:12250446-12250465	None:intergenic	35.0%
	TTATGCCGAAAATGTCTCTA+TGG	-	chr8.3:12250230-12250249	MS.gene58059:CDS	35.0%
!	ACATTTTCGGCATAATAGTG+AGG	+	chr8.3:12250225-12250244	None:intergenic	35.0%
!	ATGGCAAAGAAAAGAGGTTT+TGG	+	chr8.3:12250427-12250446	None:intergenic	35.0%
!	GCATTTTCTATCAAGTAAGC+TGG	+	chr8.3:12251069-12251088	None:intergenic	35.0%
!	GGAAGAAATAGGTTACCTTT+TGG	+	chr8.3:12250160-12250179	None:intergenic	35.0%
!	GGCATTGTAGTTTTTGCTTT+CGG	-	chr8.3:12250839-12250858	MS.gene58059:CDS	35.0%
!	TCTTTTCTTTGCCATAAACG+AGG	-	chr8.3:12250432-12250451	MS.gene58059:CDS	35.0%
	AACTCAAGATGCATTATGGG+AGG	+	chr8.3:12250688-12250707	None:intergenic	40.0%
	AATACATTGTTACACCGTGC+GGG	-	chr8.3:12250571-12250590	MS.gene58059:CDS	40.0%
	AGTGAGGTATGCTTGTAAAG+GGG	+	chr8.3:12250209-12250228	None:intergenic	40.0%
	GAATACATTGTTACACCGTG+CGG	-	chr8.3:12250570-12250589	MS.gene58059:CDS	40.0%
	GATCATCTCCCTTGCAAATA+AGG	+	chr8.3:12250957-12250976	None:intergenic	40.0%
	TAATTGCATCGTAAATGCGG+CGG	+	chr8.3:12250300-12250319	None:intergenic	40.0%
	TTAAACATCCTCCAGGAAGA+AGG	+	chr8.3:12251107-12251126	None:intergenic	40.0%
!	AATAGGTTACCTTTTGGCCA+TGG	+	chr8.3:12250154-12250173	None:intergenic	40.0%
!	CTATTTCTTCCGACCACTTT+GGG	-	chr8.3:12250169-12250188	MS.gene58059:CDS	40.0%
!	GTATTCATTTGAGTTCCCTG+TGG	-	chr8.3:12250720-12250739	MS.gene58059:CDS	40.0%
!	GTGGTCCATAGAGACATTTT+CGG	+	chr8.3:12250238-12250257	None:intergenic	40.0%
!	TTTAAGTTCCTTCTTCCTGG+AGG	-	chr8.3:12251096-12251115	MS.gene58059:CDS	40.0%
!!	CTCCTGAAAGGAGTATTCTT+CGG	+	chr8.3:12250995-12251014	None:intergenic	40.0%
!!	TCCTGAAAGGAGTATTCTTC+GGG	+	chr8.3:12250994-12251013	None:intergenic	40.0%
	AAACTTCTTCAGTGGTGCGA+TGG	-	chr8.3:12250658-12250677	MS.gene58059:CDS	45.0%
	AATACCTCGTTCAGCTTCTG+CGG	-	chr8.3:12251035-12251054	MS.gene58059:CDS	45.0%
	AATGCCTGTGAACGTGGTAT+TGG	+	chr8.3:12250404-12250423	None:intergenic	45.0%
	AATTGCATCGTAAATGCGGC+GGG	+	chr8.3:12250299-12250318	None:intergenic	45.0%
	ATACATTGTTACACCGTGCG+GGG	-	chr8.3:12250572-12250591	MS.gene58059:CDS	45.0%
	ATGGGTCCTCATTTGATCCA+CGG	+	chr8.3:12250519-12250538	None:intergenic	45.0%
	CCAAAGTGGTCGGAAGAAAT+AGG	+	chr8.3:12250171-12250190	None:intergenic	45.0%
	CGATGTTATCTTCTCAGACG+CGG	-	chr8.3:12250813-12250832	MS.gene58059:CDS	45.0%
	CGCGTCTGAGAAGATAACAT+CGG	+	chr8.3:12250815-12250834	None:intergenic	45.0%
	CTGAGAAGATAACATCGGTC+TGG	+	chr8.3:12250810-12250829	None:intergenic	45.0%
	GATGTTATCTTCTCAGACGC+GGG	-	chr8.3:12250814-12250833	MS.gene58059:CDS	45.0%
	GGTCTTCTTAAACATCCTCC+AGG	+	chr8.3:12251114-12251133	None:intergenic	45.0%
	GTCTTGACTCTAGCACGAAT+GGG	+	chr8.3:12250537-12250556	None:intergenic	45.0%
	GTGAGGTATGCTTGTAAAGG+GGG	+	chr8.3:12250208-12250227	None:intergenic	45.0%
	TGTCTTGACTCTAGCACGAA+TGG	+	chr8.3:12250538-12250557	None:intergenic	45.0%
!	CCTATTTCTTCCGACCACTT+TGG	-	chr8.3:12250168-12250187	MS.gene58059:CDS	45.0%
!!!	TTTTGGAATGCCTGTGAACG+TGG	+	chr8.3:12250410-12250429	None:intergenic	45.0%
	ATTGCATCGTAAATGCGGCG+GGG	+	chr8.3:12250298-12250317	None:intergenic	50.0%
	CGAATGCCGGTAATTAGACC+GGG	+	chr8.3:12250785-12250804	None:intergenic	50.0%
	GAATGCCGGTAATTAGACCG+GGG	+	chr8.3:12250784-12250803	None:intergenic	50.0%
	GAGTCCAATACCACGTTCAC+AGG	-	chr8.3:12250397-12250416	MS.gene58059:CDS	50.0%
	GCCCGAAGAATACTCCTTTC+AGG	-	chr8.3:12250990-12251009	MS.gene58059:CDS	50.0%
	GCGAATGCCGGTAATTAGAC+CGG	+	chr8.3:12250786-12250805	None:intergenic	50.0%
	GCTAGAGTCAAGACAACGCA+GGG	-	chr8.3:12250543-12250562	MS.gene58059:CDS	50.0%
	GGAAAGACCTCCGTTTCACA+CGG	+	chr8.3:12250912-12250931	None:intergenic	50.0%
	GTATGCTTGTAAAGGGGGCA+GGG	+	chr8.3:12250203-12250222	None:intergenic	50.0%
	GTTGTCCACGACTTGTATCC+TGG	-	chr8.3:12250481-12250500	MS.gene58059:CDS	50.0%
	TATGCTTGTAAAGGGGGCAG+GGG	+	chr8.3:12250202-12250221	None:intergenic	50.0%
	TGCAGTCCGTGGATCAAATG+AGG	-	chr8.3:12250510-12250529	MS.gene58059:CDS	50.0%
	TGCTAGAGTCAAGACAACGC+AGG	-	chr8.3:12250542-12250561	MS.gene58059:CDS	50.0%
	TTATCTTCTCAGACGCGGGA+TGG	-	chr8.3:12250818-12250837	MS.gene58059:CDS	50.0%
!	TGAACGTGGTATTGGACTCG+AGG	+	chr8.3:12250396-12250415	None:intergenic	50.0%
	ACCAGCCATGAAGGTGGCAA+AGG	+	chr8.3:12250260-12250279	None:intergenic	55.0%
	ACCTTTGCCACCTTCATGGC+TGG	-	chr8.3:12250256-12250275	MS.gene58059:CDS	55.0%
	ACGGTCCCCGGTCTAATTAC+CGG	-	chr8.3:12250776-12250795	MS.gene58059:CDS	55.0%
	AGACCTCCGTTTCACACGGT+CGG	+	chr8.3:12250908-12250927	None:intergenic	55.0%
	AGCCATGAAGGTGGCAAAGG+TGG	+	chr8.3:12250257-12250276	None:intergenic	55.0%
	ATGCTTGTAAAGGGGGCAGG+GGG	+	chr8.3:12250201-12250220	None:intergenic	55.0%
	CTCGACCAGGATACAAGTCG+TGG	+	chr8.3:12250489-12250508	None:intergenic	55.0%
	GACCACCTTTGCCACCTTCA+TGG	-	chr8.3:12250252-12250271	MS.gene58059:CDS	55.0%
	GCCAGCTGTTGTAGTCCACA+GGG	+	chr8.3:12250738-12250757	None:intergenic	55.0%
	GGTATGCTTGTAAAGGGGGC+AGG	+	chr8.3:12250204-12250223	None:intergenic	55.0%
	TGAACCGCAGAAGCTGAACG+AGG	+	chr8.3:12251042-12251061	None:intergenic	55.0%
	TTGCATCGTAAATGCGGCGG+GGG	+	chr8.3:12250297-12250316	None:intergenic	55.0%
!	TCCCTGTGGACTACAACAGC+TGG	-	chr8.3:12250734-12250753	MS.gene58059:CDS	55.0%
	AGACCGGGGACCGTAGACAT+GGG	+	chr8.3:12250770-12250789	None:intergenic	60.0%
	ATCGTAAATGCGGCGGGGGT+CGG	+	chr8.3:12250293-12250312	None:intergenic	60.0%
	CACCGTGCGGGGATTTCCAA+CGG	-	chr8.3:12250583-12250602	MS.gene58059:CDS	60.0%
	CACCGTTGGAAATCCCCGCA+CGG	+	chr8.3:12250588-12250607	None:intergenic	60.0%
	CGAGCGACAGCCCATGTCTA+CGG	-	chr8.3:12250757-12250776	MS.gene58059:CDS	60.0%
	CGCCAGCTGTTGTAGTCCAC+AGG	+	chr8.3:12250739-12250758	None:intergenic	60.0%
	GAAGGGACCAGCCATGAAGG+TGG	+	chr8.3:12250266-12250285	None:intergenic	60.0%
	GGGGGTTGTCCCAAAGTGGT+CGG	+	chr8.3:12250181-12250200	None:intergenic	60.0%
	TAGACCGGGGACCGTAGACA+TGG	+	chr8.3:12250771-12250790	None:intergenic	60.0%
	TGCGAAGGGACCAGCCATGA+AGG	+	chr8.3:12250269-12250288	None:intergenic	60.0%
	TGCTTGTAAAGGGGGCAGGG+GGG	+	chr8.3:12250200-12250219	None:intergenic	60.0%
	ACGCCGACCGTGTGAAACGG+AGG	-	chr8.3:12250902-12250921	MS.gene58059:CDS	65.0%
	CAGCCCATGTCTACGGTCCC+CGG	-	chr8.3:12250764-12250783	MS.gene58059:CDS	65.0%
	CAGGGGGGGTTGTCCCAAAG+TGG	+	chr8.3:12250185-12250204	None:intergenic	65.0%
	CATCGGTCTGGCGCGAATGC+CGG	+	chr8.3:12250798-12250817	None:intergenic	65.0%
	GCCACGCCGACCGTGTGAAA+CGG	-	chr8.3:12250899-12250918	MS.gene58059:CDS	65.0%
	GCTTGTAAAGGGGGCAGGGG+GGG	+	chr8.3:12250199-12250218	None:intergenic	65.0%
	TCCGTTTCACACGGTCGGCG+TGG	+	chr8.3:12250903-12250922	None:intergenic	65.0%
	TCGTAAATGCGGCGGGGGTC+GGG	+	chr8.3:12250292-12250311	None:intergenic	65.0%
!	CCACGGACTGCAACTCGACC+AGG	+	chr8.3:12250502-12250521	None:intergenic	65.0%
!	CCTGGTCGAGTTGCAGTCCG+TGG	-	chr8.3:12250499-12250518	MS.gene58059:CDS	65.0%
!	CGGCGGGGGTCGGGTGCGAA+GGG	+	chr8.3:12250283-12250302	None:intergenic	80.0%
!	GCGGCGGGGGTCGGGTGCGA+AGG	+	chr8.3:12250284-12250303	None:intergenic	85.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	12250141	12251140	12250141	ID=MS.gene58059
chr8.3	mRNA	12250141	12251140	12250141	ID=MS.gene58059.t1;Parent=MS.gene58059
chr8.3	exon	12250141	12251140	12250141	ID=MS.gene58059.t1.exon1;Parent=MS.gene58059.t1
chr8.3	CDS	12250141	12251140	12250141	ID=cds.MS.gene58059.t1;Parent=MS.gene58059.t1

Gene Sequence

>MS.gene58059

GAATTTTTATCCATGGCCAAAAGGTAACCTATTTCTTCCGACCACTTTGGGACAACCCCCCCTGCCCCCTTTACAAGCATACCTCACTATTATGCCGAAAATGTCTCTATGGACCACCTTTGCCACCTTCATGGCTGGTCCCTTCGCACCCGACCCCCGCCGCATTTACGATGCAATTATCTTCAGCAATGAGTTAGACTTGCTAGAAATTAGATGGCATGAACTTTATCCATACGTGTCAAAATTTGTGATCCTCGAGTCCAATACCACGTTCACAGGCATTCCAAAACCTCTTTTCTTTGCCATAAACGAGGAAAGATTTGCATTTGCAAAACAAAAAGTTGTCCACGACTTGTATCCTGGTCGAGTTGCAGTCCGTGGATCAAATGAGGACCCATTCGTGCTAGAGTCAAGACAACGCAGGGCCATGAATACATTGTTACACCGTGCGGGGATTTCCAACGGTGATATTCTTCTAATGTCGGATACTGATGAGATTCCAAGTCCTCATACTTTGAAACTTCTTCAGTGGTGCGATGGAATTCCTCCCATAATGCATCTTGAGTTGAGAAACTACATGTATTCATTTGAGTTCCCTGTGGACTACAACAGCTGGCGAGCGACAGCCCATGTCTACGGTCCCCGGTCTAATTACCGGCATTCGCGCCAGACCGATGTTATCTTCTCAGACGCGGGATGGCATTGTAGTTTTTGCTTTCGGTATATTTCAGAGTTTGTTTTCAAAATGACTGCTTATAGCCACGCCGACCGTGTGAAACGGAGGTCTTTCCTTAGTCATTCAAGAATTCAAGACCTTATTTGCAAGGGAGATGATCTTTTTGATATGCTGCCCGAAGAATACTCCTTTCAGGAGTTGATTAAAAAGATGGGGTCAATACCTCGTTCAGCTTCTGCGGTTCATCTCCCAGCTTACTTGATAGAAAATGCAGATAAATTTAAGTTCCTTCTTCCTGGAGGATGTTTAAGAAGACCAGAATGA

Protein sequence

>MS.gene58059.t1

EFLSMAKRUPISSDHFGTTPPAPFTSIPHYYAENVSMDHLCHLHGWSLRTRPPPHLRCNYLQQUVRLARNUMAUTLSIRVKICDPRVQYHVHRHSKTSFLCHKRGKICICKTKSCPRLVSWSSCSPWIKUGPIRARVKTTQGHEYIVTPCGDFQRUYSSNVGYUUDSKSSYFETSSVVRWNSSHNASUVEKLHVFIUVPCGLQQLASDSPCLRSPVULPAFAPDRCYLLRRGMALUFLLSVYFRVCFQNDCLUPRRPCETEVFPUSFKNSRPYLQGRUSFUYAARRILLSGVDUKDGVNTSFSFCGSSPSLLDRKCRUIUVPSSWRMFKKTRM