AlfalfaGEDB | MS.gene060342

M. sativa cultivar XinJiangDaYe / MS.gene060342

KEGG: K00737
GO: GO:0003674 GO:0003824 GO:0003830 GO:0005575 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0008150 GO:0008152 GO:0008194 GO:0008375 GO:0009987 GO:0016020 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070085 GO:0071704 GO:0110165 GO:0140096 GO:0140103 GO:1901564
PFAM: PF04724.16

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060342.t1	XP_003609384.2	97.3	296	8	0	1	296	68	363	4.00E-171	610.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060342.t1	Q02527	26.4	318	170	12	13	287	206	502	7.5e-17	89.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060342.t1	G7JE73	97.3	296	8	0	1	296	68	363	2.9e-171	610.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052609	MS.gene060342	-0.811304	7.48E-51	-1.69E-46
MS.gene053143	MS.gene060342	-0.805133	1.55E-49	-1.69E-46
MS.gene058149	MS.gene060342	-0.800358	1.50E-48	-1.69E-46
MS.gene059778	MS.gene060342	-0.800176	1.63E-48	-1.69E-46
MS.gene060342	MS.gene060343	0.922329	1.13E-88	-1.69E-46
MS.gene060342	MS.gene061100	-0.800486	1.41E-48	-1.69E-46
MS.gene060342	MS.gene061707	-0.808071	3.71E-50	-1.69E-46
MS.gene060342	MS.gene26625	-0.812346	4.44E-51	-1.69E-46
MS.gene060342	MS.gene32688	-0.805083	1.58E-49	-1.69E-46
MS.gene060342	MS.gene36285	-0.810486	1.13E-50	-1.69E-46
MS.gene060342	MS.gene36291	-0.813453	2.54E-51	-1.69E-46
MS.gene060342	MS.gene38302	-0.802128	6.50E-49	-1.69E-46
MS.gene060342	MS.gene39046	-0.819001	1.46E-52	-1.69E-46
MS.gene060342	MS.gene58058	0.958413	2.51E-116	-1.69E-46
MS.gene060342	MS.gene58059	0.939698	8.20E-100	-1.69E-46
MS.gene060342	MS.gene68107	-0.828016	1.14E-54	-1.69E-46
MS.gene060342	MS.gene68420	-0.803493	3.40E-49	-1.69E-46
MS.gene060342	MS.gene74235	-0.823031	1.72E-53	-1.69E-46
MS.gene060342	MS.gene80201	-0.802693	4.97E-49	-1.69E-46
MS.gene060342	MS.gene81525	0.820561	6.43E-53	-1.69E-46
MS.gene060342	MS.gene88032	-0.813743	2.19E-51	-1.69E-46
MS.gene060342	MS.gene89100	-0.809906	1.50E-50	-1.69E-46
MS.gene060342	MS.gene90121	-0.818252	2.16E-52	-1.69E-46
MS.gene060342	MS.gene90536	0.820236	7.63E-53	-1.69E-46
MS.gene060342	MS.gene90778	-0.820736	5.86E-53	-1.69E-46
MS.gene060342	MS.gene96190	-0.820526	6.55E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060342.t1	MTR_4g115070	97.297	296	8	0	1	296	68	363	0.0	603
MS.gene060342.t1	MTR_7g033325	58.163	294	119	2	1	293	93	383	5.93e-130	375
MS.gene060342.t1	MTR_7g033325	58.163	294	119	2	1	293	94	384	6.62e-130	375
MS.gene060342.t1	MTR_8g089840	58.163	294	119	2	1	293	99	389	1.33e-129	374
MS.gene060342.t1	MTR_3g096150	58.503	294	118	2	1	293	74	364	1.92e-129	372

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060342.t1	AT2G13290	72.054	297	81	2	1	295	65	361	2.52e-162	456
MS.gene060342.t1	AT2G13290	72.054	297	81	2	1	295	65	361	2.52e-162	456
MS.gene060342.t1	AT3G27540	58.923	297	118	2	1	296	93	386	1.08e-135	389
MS.gene060342.t1	AT1G12990	60.606	297	113	3	1	296	99	392	4.69e-132	380
MS.gene060342.t1	AT5G14480	59.184	294	116	2	1	293	94	384	4.68e-131	377
MS.gene060342.t1	AT1G67880	58.923	297	119	2	1	296	96	390	3.85e-129	373
MS.gene060342.t1	AT3G01620	57.627	295	120	3	1	293	94	385	3.45e-126	365
MS.gene060342.t1	AT3G26445	37.391	115	62	2	71	184	8	113	2.34e-17	77.0

Find 82 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCAAATCTTTCCTCGTTTA+TGG	0.078504	8.3:+12158672	None:intergenic
TCTCAACTCAAGATGCATTA+TGG	0.224726	8.3:+12158426	None:intergenic
GCCCGAAGAATACTCCTTTC+AGG	0.283433	8.3:-12158125	MS.gene060342:CDS
GATCATCTCCCTTGCAAATA+AGG	0.299752	8.3:+12158161	None:intergenic
ATGGCAAAGAAAAGAGGTTT+TGG	0.319405	8.3:+12158691	None:intergenic
AAATTTAAGTTCCTTCTTCC+TGG	0.329293	8.3:-12158022	MS.gene060342:CDS
GACCACCTTTGCCACCTTCA+TGG	0.344267	8.3:-12158862	MS.gene060342:CDS
CTCAACTCAAGATGCATTAT+GGG	0.348786	8.3:+12158427	None:intergenic
ACCTTTGCCACCTTCATGGC+TGG	0.368278	8.3:-12158858	MS.gene060342:CDS
CATCGTAAATGCGGCGGGGT+CGG	0.381053	8.3:+12158824	None:intergenic
TAGACTTGCTAGAAATTAGA+TGG	0.388968	8.3:-12158780	MS.gene060342:CDS
ATCGTAAATGCGGCGGGGTC+GGG	0.391595	8.3:+12158825	None:intergenic
CTTGAATTCTTGAATGACTA+AGG	0.393185	8.3:+12158185	None:intergenic
CTCCTGAAAGGAGTATTCTT+CGG	0.405596	8.3:+12158123	None:intergenic
TGCGGCGGGGTCGGGTGCGA+AGG	0.413056	8.3:+12158833	None:intergenic
TCCTGAAAGGAGTATTCTTC+GGG	0.415421	8.3:+12158124	None:intergenic
ACGGTCCCCGGTCTAATTAC+CGG	0.446231	8.3:-12158339	MS.gene060342:CDS
CGCCAGCTGTTGTAGTCCAC+AGG	0.447034	8.3:+12158379	None:intergenic
ACGGTGTAACAATGTATTCA+TGG	0.463984	8.3:+12158549	None:intergenic
GTCTTGACTCTAGCACGAAT+GGG	0.466686	8.3:+12158581	None:intergenic
TGAAGAAGTTTCAAAGTATG+AGG	0.469432	8.3:+12158469	None:intergenic
GCGGCGGGGTCGGGTGCGAA+GGG	0.473461	8.3:+12158834	None:intergenic
AGTTTCAAAGTATGAGGACT+TGG	0.479637	8.3:+12158475	None:intergenic
AATGCCTGTGAACGTGGTAT+TGG	0.487756	8.3:+12158714	None:intergenic
AATTCAAGACCTTATTTGCA+AGG	0.500490	8.3:-12158170	MS.gene060342:CDS
CTGAGAAGATAACATCGGTC+TGG	0.501527	8.3:+12158308	None:intergenic
GTTGTCCACGACTTGTATCC+TGG	0.508526	8.3:-12158634	MS.gene060342:CDS
GAGTCCAATACCACGTTCAC+AGG	0.510681	8.3:-12158718	MS.gene060342:CDS
TGTCTTGACTCTAGCACGAA+TGG	0.512756	8.3:+12158580	None:intergenic
GCCACGCCGACCGTGTGAAA+CGG	0.512900	8.3:-12158216	MS.gene060342:CDS
AATTGCATCGTAAATGCGGC+GGG	0.517000	8.3:+12158819	None:intergenic
TTAAACATCCTCCAGGAAGA+AGG	0.517288	8.3:+12158011	None:intergenic
AAACTTCTTCAGTGGTGCGA+TGG	0.521118	8.3:-12158457	MS.gene060342:CDS
TCGTTTATGGCAAAGAAAAG+AGG	0.522502	8.3:+12158685	None:intergenic
CATCGGTCTGGCGCGAATGC+CGG	0.524753	8.3:+12158320	None:intergenic
ACCAGCCATGAAGGTGGCAA+AGG	0.530710	8.3:+12158857	None:intergenic
CGAATGCCGGTAATTAGACC+GGG	0.532797	8.3:+12158333	None:intergenic
GCGAATGCCGGTAATTAGAC+CGG	0.534546	8.3:+12158332	None:intergenic
AATACATTGTTACACCGTGC+GGG	0.535414	8.3:-12158544	MS.gene060342:CDS
ATTCAAGACCTTATTTGCAA+GGG	0.538163	8.3:-12158169	MS.gene060342:CDS
ATACTTTGAAACTTCTTCAG+TGG	0.541887	8.3:-12158465	MS.gene060342:CDS
CAGCCCATGTCTACGGTCCC+CGG	0.543615	8.3:-12158351	MS.gene060342:CDS
CGAGCGACAGCCCATGTCTA+CGG	0.544052	8.3:-12158358	MS.gene060342:CDS
TGCGAAGGGACCAGCCATGA+AGG	0.548005	8.3:+12158848	None:intergenic
CCACGGACTGCAACTCGACC+AGG	0.553739	8.3:+12158616	None:intergenic
CGGTGATATTCTTCTAATGT+CGG	0.554646	8.3:-12158512	MS.gene060342:CDS
AATACCTCGTTCAGCTTCTG+CGG	0.557017	8.3:-12158080	MS.gene060342:CDS
CACCGTGCGGGGATTTCCAA+CGG	0.563483	8.3:-12158532	MS.gene060342:CDS
AGCCATGAAGGTGGCAAAGG+TGG	0.565950	8.3:+12158860	None:intergenic
GGTCTTCTTAAACATCCTCC+AGG	0.565958	8.3:+12158004	None:intergenic
TCCCTGTGGACTACAACAGC+TGG	0.568994	8.3:-12158381	MS.gene060342:CDS
TGCAGTCCGTGGATCAAATG+AGG	0.578637	8.3:-12158605	MS.gene060342:CDS
CCTGGTCGAGTTGCAGTCCG+TGG	0.579017	8.3:-12158616	MS.gene060342:CDS
TTATCTTCTCAGACGCGGGA+TGG	0.582193	8.3:-12158297	MS.gene060342:CDS
GATGTTATCTTCTCAGACGC+GGG	0.583396	8.3:-12158301	MS.gene060342:CDS
TAGACCGGGGACCGTAGACA+TGG	0.590389	8.3:+12158347	None:intergenic
AGATAATTGCATCGTAAATG+CGG	0.593043	8.3:+12158815	None:intergenic
CATTAGAAGAATATCACCGT+TGG	0.601464	8.3:+12158516	None:intergenic
GGAAAGACCTCCGTTTCACA+CGG	0.611357	8.3:+12158206	None:intergenic
GCTAGAGTCAAGACAACGCA+GGG	0.613605	8.3:-12158572	MS.gene060342:CDS
ATGGGTCCTCATTTGATCCA+CGG	0.613838	8.3:+12158599	None:intergenic
AGACCTCCGTTTCACACGGT+CGG	0.622233	8.3:+12158210	None:intergenic
TCCGTTTCACACGGTCGGCG+TGG	0.626436	8.3:+12158215	None:intergenic
ATACATTGTTACACCGTGCG+GGG	0.628594	8.3:-12158543	MS.gene060342:CDS
AACTCAAGATGCATTATGGG+AGG	0.632104	8.3:+12158430	None:intergenic
TTTAAGTTCCTTCTTCCTGG+AGG	0.633535	8.3:-12158019	MS.gene060342:CDS
TGAACGTGGTATTGGACTCG+AGG	0.635964	8.3:+12158722	None:intergenic
CGATGTTATCTTCTCAGACG+CGG	0.644839	8.3:-12158302	MS.gene060342:CDS
TGCTAGAGTCAAGACAACGC+AGG	0.645127	8.3:-12158573	MS.gene060342:CDS
GTATTCATTTGAGTTCCCTG+TGG	0.649334	8.3:-12158395	MS.gene060342:CDS
TAATTGCATCGTAAATGCGG+CGG	0.652775	8.3:+12158818	None:intergenic
CTCGACCAGGATACAAGTCG+TGG	0.653254	8.3:+12158629	None:intergenic
GAAGGGACCAGCCATGAAGG+TGG	0.662736	8.3:+12158851	None:intergenic
ACGCCGACCGTGTGAAACGG+AGG	0.662932	8.3:-12158213	MS.gene060342:CDS
AGACCGGGGACCGTAGACAT+GGG	0.678926	8.3:+12158348	None:intergenic
GCCAGCTGTTGTAGTCCACA+GGG	0.679316	8.3:+12158380	None:intergenic
CACCGTTGGAAATCCCCGCA+CGG	0.683745	8.3:+12158530	None:intergenic
GAATACATTGTTACACCGTG+CGG	0.705399	8.3:-12158545	MS.gene060342:CDS
TGAACCGCAGAAGCTGAACG+AGG	0.716712	8.3:+12158076	None:intergenic
ATTGCATCGTAAATGCGGCG+GGG	0.720749	8.3:+12158820	None:intergenic
CGCGTCTGAGAAGATAACAT+CGG	0.723208	8.3:+12158303	None:intergenic
GAATGCCGGTAATTAGACCG+GGG	0.739409	8.3:+12158334	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	AGATAATTGCATCGTAAATG+CGG	+	chr8.3:12158050-12158069	None:intergenic	30.0%
	CTTGAATTCTTGAATGACTA+AGG	+	chr8.3:12158680-12158699	None:intergenic	30.0%
	TGAAGAAGTTTCAAAGTATG+AGG	+	chr8.3:12158396-12158415	None:intergenic	30.0%
!	AAATTTAAGTTCCTTCTTCC+TGG	-	chr8.3:12158840-12158859	MS.gene060342:CDS	30.0%
!	AATTCAAGACCTTATTTGCA+AGG	-	chr8.3:12158692-12158711	MS.gene060342:CDS	30.0%
!	AGGAGTTGATTAAAAAGATG+GGG	-	chr8.3:12158757-12158776	MS.gene060342:CDS	30.0%
!	ATTCAAGACCTTATTTGCAA+GGG	-	chr8.3:12158693-12158712	MS.gene060342:CDS	30.0%
!	CAGGAGTTGATTAAAAAGAT+GGG	-	chr8.3:12158756-12158775	MS.gene060342:CDS	30.0%
!	CATTTTCTATCAAGTAAGCT+GGG	+	chr8.3:12158815-12158834	None:intergenic	30.0%
!	CTTTTTAATCAACTCCTGAA+AGG	+	chr8.3:12158754-12158773	None:intergenic	30.0%
!	TCAGGAGTTGATTAAAAAGA+TGG	-	chr8.3:12158755-12158774	MS.gene060342:CDS	30.0%
!!	ATACTTTGAAACTTCTTCAG+TGG	-	chr8.3:12158397-12158416	MS.gene060342:CDS	30.0%
!!	ATCACAAATTTTGACACGTA+TGG	+	chr8.3:12158120-12158139	None:intergenic	30.0%
!!	TAGACTTGCTAGAAATTAGA+TGG	-	chr8.3:12158082-12158101	MS.gene060342:CDS	30.0%
	ACGGTGTAACAATGTATTCA+TGG	+	chr8.3:12158316-12158335	None:intergenic	35.0%
	AGTTTCAAAGTATGAGGACT+TGG	+	chr8.3:12158390-12158409	None:intergenic	35.0%
	CATTAGAAGAATATCACCGT+TGG	+	chr8.3:12158349-12158368	None:intergenic	35.0%
	CGGTGATATTCTTCTAATGT+CGG	-	chr8.3:12158350-12158369	MS.gene060342:CDS	35.0%
	CTCAACTCAAGATGCATTAT+GGG	+	chr8.3:12158438-12158457	None:intergenic	35.0%
	TCGTTTATGGCAAAGAAAAG+AGG	+	chr8.3:12158180-12158199	None:intergenic	35.0%
	TCTCAACTCAAGATGCATTA+TGG	+	chr8.3:12158439-12158458	None:intergenic	35.0%
	TGCAAATCTTTCCTCGTTTA+TGG	+	chr8.3:12158193-12158212	None:intergenic	35.0%
!	ATGGCAAAGAAAAGAGGTTT+TGG	+	chr8.3:12158174-12158193	None:intergenic	35.0%
!	GCATTTTCTATCAAGTAAGC+TGG	+	chr8.3:12158816-12158835	None:intergenic	35.0%
!	GGCATTGTAGTTTTTGCTTT+CGG	-	chr8.3:12158586-12158605	MS.gene060342:CDS	35.0%
!	TCTTTTCTTTGCCATAAACG+AGG	-	chr8.3:12158179-12158198	MS.gene060342:CDS	35.0%
	AACTCAAGATGCATTATGGG+AGG	+	chr8.3:12158435-12158454	None:intergenic	40.0%
	AATACATTGTTACACCGTGC+GGG	-	chr8.3:12158318-12158337	MS.gene060342:CDS	40.0%
	GAATACATTGTTACACCGTG+CGG	-	chr8.3:12158317-12158336	MS.gene060342:CDS	40.0%
	GATCATCTCCCTTGCAAATA+AGG	+	chr8.3:12158704-12158723	None:intergenic	40.0%
	TAATTGCATCGTAAATGCGG+CGG	+	chr8.3:12158047-12158066	None:intergenic	40.0%
	TTAAACATCCTCCAGGAAGA+AGG	+	chr8.3:12158854-12158873	None:intergenic	40.0%
!	GTATTCATTTGAGTTCCCTG+TGG	-	chr8.3:12158467-12158486	MS.gene060342:CDS	40.0%
!	TTTAAGTTCCTTCTTCCTGG+AGG	-	chr8.3:12158843-12158862	MS.gene060342:CDS	40.0%
!!	CTCCTGAAAGGAGTATTCTT+CGG	+	chr8.3:12158742-12158761	None:intergenic	40.0%
!!	TCCTGAAAGGAGTATTCTTC+GGG	+	chr8.3:12158741-12158760	None:intergenic	40.0%
	AAACTTCTTCAGTGGTGCGA+TGG	-	chr8.3:12158405-12158424	MS.gene060342:CDS	45.0%
	AATACCTCGTTCAGCTTCTG+CGG	-	chr8.3:12158782-12158801	MS.gene060342:CDS	45.0%
	AATGCCTGTGAACGTGGTAT+TGG	+	chr8.3:12158151-12158170	None:intergenic	45.0%
	AATTGCATCGTAAATGCGGC+GGG	+	chr8.3:12158046-12158065	None:intergenic	45.0%
	ATACATTGTTACACCGTGCG+GGG	-	chr8.3:12158319-12158338	MS.gene060342:CDS	45.0%
	ATGGGTCCTCATTTGATCCA+CGG	+	chr8.3:12158266-12158285	None:intergenic	45.0%
	CGATGTTATCTTCTCAGACG+CGG	-	chr8.3:12158560-12158579	MS.gene060342:CDS	45.0%
	CGCGTCTGAGAAGATAACAT+CGG	+	chr8.3:12158562-12158581	None:intergenic	45.0%
	CTGAGAAGATAACATCGGTC+TGG	+	chr8.3:12158557-12158576	None:intergenic	45.0%
	GATGTTATCTTCTCAGACGC+GGG	-	chr8.3:12158561-12158580	MS.gene060342:CDS	45.0%
	GGTCTTCTTAAACATCCTCC+AGG	+	chr8.3:12158861-12158880	None:intergenic	45.0%
	GTCTTGACTCTAGCACGAAT+GGG	+	chr8.3:12158284-12158303	None:intergenic	45.0%
	TGTCTTGACTCTAGCACGAA+TGG	+	chr8.3:12158285-12158304	None:intergenic	45.0%
!!!	TTTTGGAATGCCTGTGAACG+TGG	+	chr8.3:12158157-12158176	None:intergenic	45.0%
	ATTGCATCGTAAATGCGGCG+GGG	+	chr8.3:12158045-12158064	None:intergenic	50.0%
	CGAATGCCGGTAATTAGACC+GGG	+	chr8.3:12158532-12158551	None:intergenic	50.0%
	GAATGCCGGTAATTAGACCG+GGG	+	chr8.3:12158531-12158550	None:intergenic	50.0%
	GAGTCCAATACCACGTTCAC+AGG	-	chr8.3:12158144-12158163	MS.gene060342:CDS	50.0%
	GCCCGAAGAATACTCCTTTC+AGG	-	chr8.3:12158737-12158756	MS.gene060342:CDS	50.0%
	GCGAATGCCGGTAATTAGAC+CGG	+	chr8.3:12158533-12158552	None:intergenic	50.0%
	GCTAGAGTCAAGACAACGCA+GGG	-	chr8.3:12158290-12158309	MS.gene060342:CDS	50.0%
	GGAAAGACCTCCGTTTCACA+CGG	+	chr8.3:12158659-12158678	None:intergenic	50.0%
	GTTGTCCACGACTTGTATCC+TGG	-	chr8.3:12158228-12158247	MS.gene060342:CDS	50.0%
	TGCAGTCCGTGGATCAAATG+AGG	-	chr8.3:12158257-12158276	MS.gene060342:CDS	50.0%
	TGCTAGAGTCAAGACAACGC+AGG	-	chr8.3:12158289-12158308	MS.gene060342:CDS	50.0%
	TTATCTTCTCAGACGCGGGA+TGG	-	chr8.3:12158565-12158584	MS.gene060342:CDS	50.0%
!	TGAACGTGGTATTGGACTCG+AGG	+	chr8.3:12158143-12158162	None:intergenic	50.0%
	ACCAGCCATGAAGGTGGCAA+AGG	+	chr8.3:12158008-12158027	None:intergenic	55.0%
	ACCTTTGCCACCTTCATGGC+TGG	-	chr8.3:12158004-12158023	MS.gene060342:CDS	55.0%
	ACGGTCCCCGGTCTAATTAC+CGG	-	chr8.3:12158523-12158542	MS.gene060342:CDS	55.0%
	AGACCTCCGTTTCACACGGT+CGG	+	chr8.3:12158655-12158674	None:intergenic	55.0%
	AGCCATGAAGGTGGCAAAGG+TGG	+	chr8.3:12158005-12158024	None:intergenic	55.0%
	CTCGACCAGGATACAAGTCG+TGG	+	chr8.3:12158236-12158255	None:intergenic	55.0%
	GACCACCTTTGCCACCTTCA+TGG	-	chr8.3:12158000-12158019	MS.gene060342:CDS	55.0%
	GCCAGCTGTTGTAGTCCACA+GGG	+	chr8.3:12158485-12158504	None:intergenic	55.0%
	TGAACCGCAGAAGCTGAACG+AGG	+	chr8.3:12158789-12158808	None:intergenic	55.0%
!	TCCCTGTGGACTACAACAGC+TGG	-	chr8.3:12158481-12158500	MS.gene060342:CDS	55.0%
	AGACCGGGGACCGTAGACAT+GGG	+	chr8.3:12158517-12158536	None:intergenic	60.0%
	ATCGTAAATGCGGCGGGGTC+GGG	+	chr8.3:12158040-12158059	None:intergenic	60.0%
	CACCGTGCGGGGATTTCCAA+CGG	-	chr8.3:12158330-12158349	MS.gene060342:CDS	60.0%
	CACCGTTGGAAATCCCCGCA+CGG	+	chr8.3:12158335-12158354	None:intergenic	60.0%
	CATCGTAAATGCGGCGGGGT+CGG	+	chr8.3:12158041-12158060	None:intergenic	60.0%
	CGAGCGACAGCCCATGTCTA+CGG	-	chr8.3:12158504-12158523	MS.gene060342:CDS	60.0%
	CGCCAGCTGTTGTAGTCCAC+AGG	+	chr8.3:12158486-12158505	None:intergenic	60.0%
	GAAGGGACCAGCCATGAAGG+TGG	+	chr8.3:12158014-12158033	None:intergenic	60.0%
	TAGACCGGGGACCGTAGACA+TGG	+	chr8.3:12158518-12158537	None:intergenic	60.0%
	TGCGAAGGGACCAGCCATGA+AGG	+	chr8.3:12158017-12158036	None:intergenic	60.0%
	ACGCCGACCGTGTGAAACGG+AGG	-	chr8.3:12158649-12158668	MS.gene060342:CDS	65.0%
	CAGCCCATGTCTACGGTCCC+CGG	-	chr8.3:12158511-12158530	MS.gene060342:CDS	65.0%
	CATCGGTCTGGCGCGAATGC+CGG	+	chr8.3:12158545-12158564	None:intergenic	65.0%
	GCCACGCCGACCGTGTGAAA+CGG	-	chr8.3:12158646-12158665	MS.gene060342:CDS	65.0%
	TCCGTTTCACACGGTCGGCG+TGG	+	chr8.3:12158650-12158669	None:intergenic	65.0%
!	CCACGGACTGCAACTCGACC+AGG	+	chr8.3:12158249-12158268	None:intergenic	65.0%
!	CCTGGTCGAGTTGCAGTCCG+TGG	-	chr8.3:12158246-12158265	MS.gene060342:CDS	65.0%
!	GCGGCGGGGTCGGGTGCGAA+GGG	+	chr8.3:12158031-12158050	None:intergenic	80.0%
!	TGCGGCGGGGTCGGGTGCGA+AGG	+	chr8.3:12158032-12158051	None:intergenic	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	12157997	12158887	12157997	ID=MS.gene060342
chr8.3	mRNA	12157997	12158887	12157997	ID=MS.gene060342.t1;Parent=MS.gene060342
chr8.3	exon	12157997	12158887	12157997	ID=MS.gene060342.t1.exon1;Parent=MS.gene060342.t1
chr8.3	CDS	12157997	12158887	12157997	ID=cds.MS.gene060342.t1;Parent=MS.gene060342.t1

Gene Sequence

>MS.gene060342

ATGGACCACCTTTGCCACCTTCATGGCTGGTCCCTTCGCACCCGACCCCGCCGCATTTACGATGCAATTATCTTCAGCAATGAGTTAGACTTGCTAGAAATTAGATGGCATGAACTTTATCCATACGTGTCAAAATTTGTGATCCTCGAGTCCAATACCACGTTCACAGGCATTCCAAAACCTCTTTTCTTTGCCATAAACGAGGAAAGATTTGCATTTGCAAAACAAAAAGTTGTCCACGACTTGTATCCTGGTCGAGTTGCAGTCCGTGGATCAAATGAGGACCCATTCGTGCTAGAGTCAAGACAACGCAGGGCCATGAATACATTGTTACACCGTGCGGGGATTTCCAACGGTGATATTCTTCTAATGTCGGATACTGATGAGATTCCAAGTCCTCATACTTTGAAACTTCTTCAGTGGTGCGATGGAATTCCTCCCATAATGCATCTTGAGTTGAGAAACTACATGTATTCATTTGAGTTCCCTGTGGACTACAACAGCTGGCGAGCGACAGCCCATGTCTACGGTCCCCGGTCTAATTACCGGCATTCGCGCCAGACCGATGTTATCTTCTCAGACGCGGGATGGCATTGTAGTTTTTGCTTTCGGTATATTTCAGAGTTTGTTTTCAAAATGACTGCTTATAGCCACGCCGACCGTGTGAAACGGAGGTCTTTCCTTAGTCATTCAAGAATTCAAGACCTTATTTGCAAGGGAGATGATCTTTTTGATATGCTGCCCGAAGAATACTCCTTTCAGGAGTTGATTAAAAAGATGGGGTCAATACCTCGTTCAGCTTCTGCGGTTCATCTCCCAGCTTACTTGATAGAAAATGCAGATAAATTTAAGTTCCTTCTTCCTGGAGGATGTTTAAGAAGACCAGAATGA

Protein sequence

>MS.gene060342.t1

MDHLCHLHGWSLRTRPRRIYDAIIFSNELDLLEIRWHELYPYVSKFVILESNTTFTGIPKPLFFAINEERFAFAKQKVVHDLYPGRVAVRGSNEDPFVLESRQRRAMNTLLHRAGISNGDILLMSDTDEIPSPHTLKLLQWCDGIPPIMHLELRNYMYSFEFPVDYNSWRATAHVYGPRSNYRHSRQTDVIFSDAGWHCSFCFRYISEFVFKMTAYSHADRVKRRSFLSHSRIQDLICKGDDLFDMLPEEYSFQELIKKMGSIPRSASAVHLPAYLIENADKFKFLLPGGCLRRPE