Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58068.t1 | XP_003610270.1 | 88.9 | 813 | 14 | 5 | 1 | 737 | 264 | 1076 | 0.00E+00 | 1356.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58068.t1 | Q9SUG7 | 54.8 | 816 | 289 | 12 | 1 | 748 | 264 | 1067 | 5.1e-219 | 762.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58068.t1 | G7JFI4 | 88.9 | 813 | 14 | 5 | 1 | 737 | 264 | 1076 | 0.0e+00 | 1356.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049744 | MS.gene58068 | 0.827328 | 1.66E-54 | -1.69E-46 |
MS.gene051198 | MS.gene58068 | 0.808896 | 2.47E-50 | -1.69E-46 |
MS.gene051209 | MS.gene58068 | 0.815403 | 9.41E-52 | -1.69E-46 |
MS.gene051800 | MS.gene58068 | 0.841716 | 4.01E-58 | -1.69E-46 |
MS.gene05191 | MS.gene58068 | 0.805874 | 1.08E-49 | -1.69E-46 |
MS.gene053486 | MS.gene58068 | 0.817493 | 3.20E-52 | -1.69E-46 |
MS.gene05350 | MS.gene58068 | 0.804487 | 2.11E-49 | -1.69E-46 |
MS.gene056507 | MS.gene58068 | 0.804332 | 2.27E-49 | -1.69E-46 |
MS.gene05686 | MS.gene58068 | 0.813884 | 2.04E-51 | -1.69E-46 |
MS.gene056973 | MS.gene58068 | 0.819806 | 9.57E-53 | -1.69E-46 |
MS.gene058010 | MS.gene58068 | 0.811053 | 8.48E-51 | -1.69E-46 |
MS.gene058081 | MS.gene58068 | 0.824532 | 7.67E-54 | -1.69E-46 |
MS.gene058289 | MS.gene58068 | 0.809102 | 2.23E-50 | -1.69E-46 |
MS.gene058919 | MS.gene58068 | 0.816444 | 5.51E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58068.t1 | MTR_4g130370 | 88.930 | 813 | 14 | 5 | 1 | 737 | 264 | 1076 | 0.0 | 1439 |
MS.gene58068.t1 | MTR_4g130370 | 88.189 | 762 | 14 | 5 | 1 | 686 | 264 | 1025 | 0.0 | 1332 |
MS.gene58068.t1 | MTR_4g130370 | 87.808 | 689 | 8 | 5 | 1 | 613 | 264 | 952 | 0.0 | 1194 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58068.t1 | AT4G30790 | 56.740 | 816 | 273 | 12 | 1 | 748 | 264 | 1067 | 0.0 | 843 |
Find 168 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCGACAGGATGGTTTATT+TGG | 0.139495 | 8.2:-4585592 | MS.gene58068:CDS |
TTTCTTGGCCACCAAGAATT+TGG | 0.171974 | 8.2:-4586732 | MS.gene58068:CDS |
ACAAAGCTTAAAGCTGTTTA+TGG | 0.181478 | 8.2:-4584278 | MS.gene58068:intron |
TGCAGATTCATTGCGCAATT+TGG | 0.193397 | 8.2:-4583766 | MS.gene58068:CDS |
GCTGAGGCTGTAGATATTTC+AGG | 0.199531 | 8.2:-4585171 | MS.gene58068:CDS |
GTTGACCATTGGGCCTTTCT+TGG | 0.219906 | 8.2:-4586747 | MS.gene58068:CDS |
CAGGGATGTGTTATCATCTA+TGG | 0.242726 | 8.2:-4585380 | MS.gene58068:CDS |
GCGCAATTTGGCACAATCTT+TGG | 0.263599 | 8.2:-4583754 | MS.gene58068:CDS |
TCACAATTTAAGCAGAGTTT+TGG | 0.265029 | 8.2:-4586797 | MS.gene58068:CDS |
CTCAGTGGTTTGTCCAGACT+TGG | 0.274110 | 8.2:-4584382 | MS.gene58068:CDS |
GCCGACTTTCCTCTTCTTGC+TGG | 0.295700 | 8.2:-4584766 | MS.gene58068:CDS |
ATTCTCAACCTCCATCTTGC+AGG | 0.295907 | 8.2:+4585080 | None:intergenic |
AATTGCTTGCTCCAAATTCT+TGG | 0.301452 | 8.2:+4586721 | None:intergenic |
AACAAAGAGAAAATTTCTTT+TGG | 0.317814 | 8.2:-4582269 | MS.gene58068:CDS |
TTTGTTGGCCGCATCCATTC+TGG | 0.324389 | 8.2:+4582908 | None:intergenic |
CACTGCTTTGCATTTCTTCA+CGG | 0.332909 | 8.2:+4584508 | None:intergenic |
TTCGACAGGATGGTTTATTT+GGG | 0.339262 | 8.2:-4585591 | MS.gene58068:CDS |
CGCAATGAATCTGCAAAATC+AGG | 0.339684 | 8.2:+4583774 | None:intergenic |
CCGGCAGTGACTTCACAATT+TGG | 0.343495 | 8.2:+4582070 | None:intergenic |
CGAGAAACGTATTCAAGAAT+TGG | 0.345871 | 8.2:-4584848 | MS.gene58068:CDS |
AGCAGACCTAACTTCATTGT+TGG | 0.365469 | 8.2:-4582114 | MS.gene58068:CDS |
CAAACAGCTCCGCAAAGAAT+TGG | 0.368948 | 8.2:-4582889 | MS.gene58068:CDS |
GCCTTTGTGCTGACTCCATC+TGG | 0.370272 | 8.2:-4582221 | MS.gene58068:CDS |
TTCTTTGCGGAGCTGTTTGT+TGG | 0.379212 | 8.2:+4582893 | None:intergenic |
CAACTTGTCATCATTTACTT+TGG | 0.381765 | 8.2:+4584356 | None:intergenic |
AGATAAGATAGCCGGACAAT+TGG | 0.381849 | 8.2:-4584472 | MS.gene58068:CDS |
AGATAAGAAGCCAACTTTAT+CGG | 0.382032 | 8.2:+4582962 | None:intergenic |
CATGGGCATGGCTGGCCAAT+TGG | 0.383139 | 8.2:-4585482 | MS.gene58068:CDS |
CATGATGCAGTTTCAGCCTT+GGG | 0.385423 | 8.2:-4585817 | MS.gene58068:CDS |
ATTTGTCCAACAATGAAGTT+AGG | 0.387721 | 8.2:+4582108 | None:intergenic |
GTCGAAGACTTGTTGACCAT+TGG | 0.392228 | 8.2:-4586758 | MS.gene58068:CDS |
GAAAACATGTTGGATTCATC+TGG | 0.394007 | 8.2:-4584573 | MS.gene58068:CDS |
TTTACTTTGGAACCCAAGTC+TGG | 0.396310 | 8.2:+4584369 | None:intergenic |
TAAGCTTCAACTTGAGAAAC+AGG | 0.403381 | 8.2:-4582832 | MS.gene58068:intron |
TTAAAATTGTTCCACAGTAT+TGG | 0.408472 | 8.2:-4585565 | MS.gene58068:CDS |
TCATGATGCAGTTTCAGCCT+TGG | 0.409553 | 8.2:-4585818 | MS.gene58068:CDS |
TAGCAAGCCTTTCAGCCAAT+TGG | 0.412297 | 8.2:+4585467 | None:intergenic |
AGGAGGTTGCTGTGCTCAAA+AGG | 0.412443 | 8.2:-4584255 | MS.gene58068:CDS |
AGTTCCTTTGATGCAAAACT+TGG | 0.416902 | 8.2:-4584640 | MS.gene58068:intron |
GACGAAGCGAGGATGACAAT+TGG | 0.417283 | 8.2:+4585842 | None:intergenic |
CTTAAAGCTGTTTATGGAGG+AGG | 0.427355 | 8.2:-4584272 | MS.gene58068:intron |
GATAAGATAGCCGGACAATT+GGG | 0.429213 | 8.2:-4584471 | MS.gene58068:CDS |
AGGGATGTGTTATCATCTAT+GGG | 0.430675 | 8.2:-4585379 | MS.gene58068:CDS |
TGTTAACACTGTAAAGAAAC+TGG | 0.431131 | 8.2:-4585884 | MS.gene58068:CDS |
AACATAGCTCCATTTGATGA+TGG | 0.441134 | 8.2:-4585325 | MS.gene58068:CDS |
GACTCCATCTGGACATTATG+AGG | 0.442975 | 8.2:-4582210 | MS.gene58068:CDS |
GGTAGCTTTAAAAGTGCATC+TGG | 0.443130 | 8.2:-4585219 | MS.gene58068:CDS |
TTCCTCTTCTTGCTGGCAGC+GGG | 0.443538 | 8.2:-4584759 | MS.gene58068:CDS |
CTGAAAGGCTTGCTACAAAA+CGG | 0.449076 | 8.2:-4585459 | MS.gene58068:CDS |
TTTCCTCTTCTTGCTGGCAG+CGG | 0.455124 | 8.2:-4584760 | MS.gene58068:CDS |
ACCATCGCCTCTTTAAATAC+AGG | 0.458251 | 8.2:+4585613 | None:intergenic |
AGTAAATGATGACAAGTTGT+TGG | 0.459596 | 8.2:-4584352 | MS.gene58068:CDS |
TCAGATAGAGTACGAGTCAT+TGG | 0.461013 | 8.2:-4585000 | MS.gene58068:intron |
TCGAAGACTTGTTGACCATT+GGG | 0.464211 | 8.2:-4586757 | MS.gene58068:CDS |
GGCTTCTATGAAGCTGTACA+TGG | 0.468655 | 8.2:-4585500 | MS.gene58068:CDS |
ACAAAGTGCACTTGCAGATA+AGG | 0.471498 | 8.2:-4584325 | MS.gene58068:intron |
ATTGGAGGAGAAAAGAGATC+AGG | 0.471597 | 8.2:-4582871 | MS.gene58068:CDS |
ATGTTGACATCACATTGGTT+AGG | 0.473870 | 8.2:+4585343 | None:intergenic |
CGAGTCATTGGACGATGAAA+AGG | 0.478778 | 8.2:-4584988 | MS.gene58068:CDS |
AAATTCTTGGTGGCCAAGAA+AGG | 0.480711 | 8.2:+4586734 | None:intergenic |
TGCATGGTTCGTGCATTCCC+AGG | 0.481834 | 8.2:-4585399 | MS.gene58068:CDS |
ACGAAGCGAGGATGACAATT+GGG | 0.485806 | 8.2:+4585843 | None:intergenic |
GAAGCTACTTGATGAATCTC+AGG | 0.487168 | 8.2:-4584215 | MS.gene58068:intron |
TGGCTGGCCAATTGGCTGAA+AGG | 0.488333 | 8.2:-4585474 | MS.gene58068:CDS |
TGAAAGGCTTGCTACAAAAC+GGG | 0.490025 | 8.2:-4585458 | MS.gene58068:CDS |
TGCTTGCTCCAAATTCTTGG+TGG | 0.491412 | 8.2:+4586724 | None:intergenic |
ATAGATGAACTGCGCTCACT+TGG | 0.492512 | 8.2:-4583952 | MS.gene58068:intron |
ACATAGCTCCATTTGATGAT+GGG | 0.492665 | 8.2:-4585324 | MS.gene58068:intron |
ACAGTTCCCTGTATTTAAAG+AGG | 0.493578 | 8.2:-4585620 | MS.gene58068:CDS |
TAAAGAGGCGATGGTTCGAC+AGG | 0.495343 | 8.2:-4585605 | MS.gene58068:CDS |
ATATTCATCTTTCAAATGCA+AGG | 0.495722 | 8.2:+4584923 | None:intergenic |
TGCAAAATCAGGAACACCAC+CGG | 0.497420 | 8.2:+4583785 | None:intergenic |
AAGACTTGTGTTTATGCTCC+CGG | 0.498645 | 8.2:-4583804 | MS.gene58068:CDS |
TAAGCAAACCCATCATCAAA+TGG | 0.499064 | 8.2:+4585316 | None:intergenic |
AAGCTGTACATGGGCATGGC+TGG | 0.499581 | 8.2:-4585490 | MS.gene58068:CDS |
GCATCTCGATTCATCTATGA+TGG | 0.500628 | 8.2:-4584538 | MS.gene58068:CDS |
CTATTTCTGCAAGGCAAGCT+CGG | 0.502644 | 8.2:+4585533 | None:intergenic |
TGCTGTGCTCAAAAGGGAGT+TGG | 0.504471 | 8.2:-4584248 | MS.gene58068:CDS |
TAGTGACAAACCCAATTGTC+CGG | 0.508868 | 8.2:+4584461 | None:intergenic |
AATACATGAAACTTCATCCA+TGG | 0.514079 | 8.2:+4584666 | None:intergenic |
ATTGTCTGATCAGTATGTGC+AGG | 0.515618 | 8.2:-4584818 | MS.gene58068:CDS |
TTGTTTGCACGAGGCGAGAG+AGG | 0.516785 | 8.2:-4583925 | MS.gene58068:CDS |
ATTTATCATGCAATTCTTCG+CGG | 0.517299 | 8.2:+4582934 | None:intergenic |
CCGAAAATGTATTCGAGTGT+TGG | 0.518245 | 8.2:-4582985 | MS.gene58068:CDS |
TCAGTGGTTTGTCCAGACTT+GGG | 0.522839 | 8.2:-4584381 | MS.gene58068:CDS |
TTGTCGTGAACATCATACAT+AGG | 0.526659 | 8.2:+4585793 | None:intergenic |
CCCTGTATTTAAAGAGGCGA+TGG | 0.528264 | 8.2:-4585614 | MS.gene58068:CDS |
AAATCACTTGCCTAAAATGC+AGG | 0.533426 | 8.2:-4585770 | MS.gene58068:CDS |
GAGGCGATGGTTCGACAGGA+TGG | 0.534869 | 8.2:-4585601 | MS.gene58068:CDS |
GCCAGCAAGAAGAGGAAAGT+CGG | 0.542848 | 8.2:+4584765 | None:intergenic |
CATAGATGATAACACATCCC+TGG | 0.542849 | 8.2:+4585381 | None:intergenic |
TGATAGCTCTCACTTGGCTG+AGG | 0.543026 | 8.2:-4585187 | MS.gene58068:CDS |
TGAAACTTCATCCATGGGCT+CGG | 0.545247 | 8.2:+4584672 | None:intergenic |
GGAGCTTGAGGTCTCGAGAC+GGG | 0.545556 | 8.2:-4585437 | MS.gene58068:CDS |
AAGTTAGGTCTGCTTGAAGA+TGG | 0.548097 | 8.2:+4582123 | None:intergenic |
CTATTTATCTGCTGAATCTG+TGG | 0.550652 | 8.2:-4582159 | MS.gene58068:CDS |
GATATCTACTACCGAGCCCA+TGG | 0.550726 | 8.2:-4584683 | MS.gene58068:CDS |
GTAGTTTCTGATCTTTGATG+AGG | 0.551795 | 8.2:+4585641 | None:intergenic |
GTCATTGGACGATGAAAAGG+TGG | 0.551830 | 8.2:-4584985 | MS.gene58068:CDS |
CGAGTGTTGGCCGATAAAGT+TGG | 0.552798 | 8.2:-4582972 | MS.gene58068:CDS |
TTCTTCTCACTATTTCTGCA+AGG | 0.553558 | 8.2:+4585524 | None:intergenic |
TTCCCGCTGCCAGCAAGAAG+AGG | 0.554559 | 8.2:+4584757 | None:intergenic |
CTACCAACACGCTGTCATCA+AGG | 0.555366 | 8.2:+4585115 | None:intergenic |
CTTGGAGAATTGTTTGCACG+AGG | 0.557223 | 8.2:-4583934 | MS.gene58068:CDS |
ACAGCTCCGCAAAGAATTGG+AGG | 0.566340 | 8.2:-4582886 | MS.gene58068:CDS |
GCATGATAAATACACCAGAA+TGG | 0.566428 | 8.2:-4582922 | MS.gene58068:CDS |
CTTTGCATTTCTTCACGGTG+AGG | 0.567148 | 8.2:+4584513 | None:intergenic |
AGCGTGTTGGTAGAAATTGC+TGG | 0.575401 | 8.2:-4585105 | MS.gene58068:CDS |
GGAGGTTGCTGTGCTCAAAA+GGG | 0.576779 | 8.2:-4584254 | MS.gene58068:CDS |
TATGAAGCTGTACATGGGCA+TGG | 0.576835 | 8.2:-4585494 | MS.gene58068:CDS |
TCATAGATGAATCGAGATGC+GGG | 0.577120 | 8.2:+4584541 | None:intergenic |
GATTAGTGATAGCTCTCACT+TGG | 0.578335 | 8.2:-4585193 | MS.gene58068:CDS |
ATAGATGATAACACATCCCT+GGG | 0.580269 | 8.2:+4585382 | None:intergenic |
AATTGCTGGAACCTGCAAGA+TGG | 0.583942 | 8.2:-4585091 | MS.gene58068:CDS |
GACGACTTTATGAGAGTGCA+TGG | 0.584175 | 8.2:-4585415 | MS.gene58068:CDS |
CCATCGCCTCTTTAAATACA+GGG | 0.586653 | 8.2:+4585614 | None:intergenic |
ATACATGAAACTTCATCCAT+GGG | 0.587365 | 8.2:+4584667 | None:intergenic |
GCAAAATCAGGAACACCACC+GGG | 0.590887 | 8.2:+4583786 | None:intergenic |
GTTGAGAATGCAAAACTGAA+AGG | 0.593156 | 8.2:-4585066 | MS.gene58068:intron |
TGCAGAAATAGTGAGAAGAA+AGG | 0.594628 | 8.2:-4585521 | MS.gene58068:CDS |
TTGTCTGATCAGTATGTGCA+GGG | 0.596807 | 8.2:-4584817 | MS.gene58068:CDS |
TCGACAGGATGGTTTATTTG+GGG | 0.596875 | 8.2:-4585590 | MS.gene58068:CDS |
CACAGGCATGCTCTCAGCAG+TGG | 0.597652 | 8.2:+4584428 | None:intergenic |
GCATGGTTCGTGCATTCCCA+GGG | 0.598220 | 8.2:-4585398 | MS.gene58068:CDS |
TGCTACAAAACGGGAGCTTG+AGG | 0.599020 | 8.2:-4585449 | MS.gene58068:CDS |
TCACATGATCTTGTACCTTG+TGG | 0.601305 | 8.2:-4584405 | MS.gene58068:CDS |
ATTTGAGAAATATGATTCTG+AGG | 0.610376 | 8.2:-4585142 | MS.gene58068:CDS |
TAAATACACCAGAATGGATG+CGG | 0.612886 | 8.2:-4582916 | MS.gene58068:CDS |
GGCTTCCGCTGTCTTATCTG+TGG | 0.612973 | 8.2:+4584944 | None:intergenic |
TGGTGTGGATGAAAACATGT+TGG | 0.614005 | 8.2:-4584583 | MS.gene58068:CDS |
AAGCTTAAAGCTGTTTATGG+AGG | 0.615447 | 8.2:-4584275 | MS.gene58068:intron |
ATTGCCTCATAATGTCCAGA+TGG | 0.615694 | 8.2:+4582206 | None:intergenic |
TGGTAAATCTTTAGATGGTG+TGG | 0.616470 | 8.2:-4584598 | MS.gene58068:intron |
ATCATAGATGAATCGAGATG+CGG | 0.616680 | 8.2:+4584540 | None:intergenic |
TCTTGTACCTTGTGGCTCAG+TGG | 0.618775 | 8.2:-4584397 | MS.gene58068:CDS |
GTCGGCAGCATCATTTACAC+TGG | 0.619076 | 8.2:+4584783 | None:intergenic |
GCAAGGCAAGCTCGGTACGA+AGG | 0.620616 | 8.2:+4585541 | None:intergenic |
ATACTCTGAGGCCCTCCTGT+CGG | 0.624832 | 8.2:+4583878 | None:intergenic |
TGCATCATGAGGACGAAGCG+AGG | 0.625522 | 8.2:+4585831 | None:intergenic |
GGTGGCCAAGAAAGGCCCAA+TGG | 0.627470 | 8.2:+4586742 | None:intergenic |
TTTGATGAGGTAAGAAACGT+AGG | 0.627951 | 8.2:+4585654 | None:intergenic |
GAGCTATGTTGACATCACAT+TGG | 0.637009 | 8.2:+4585338 | None:intergenic |
ACTTACAGGCTGGAGAAGCA+TGG | 0.638144 | 8.2:-4585240 | MS.gene58068:intron |
GTGCATCTGTTATTAAGATG+CGG | 0.640517 | 8.2:-4583845 | MS.gene58068:CDS |
CATTGGACGATGAAAAGGTG+GGG | 0.641616 | 8.2:-4584983 | MS.gene58068:CDS |
GCTTCTATGAAGCTGTACAT+GGG | 0.643553 | 8.2:-4585499 | MS.gene58068:CDS |
AACATCATACATAGGACCCA+AGG | 0.649305 | 8.2:+4585801 | None:intergenic |
GGTACAAGATCATGTGACAC+AGG | 0.655675 | 8.2:+4584411 | None:intergenic |
CCTCCTTGATGACAGCGTGT+TGG | 0.657169 | 8.2:-4585118 | MS.gene58068:CDS |
GGGAGCTTGAGGTCTCGAGA+CGG | 0.658376 | 8.2:-4585438 | MS.gene58068:CDS |
TCATTGGACGATGAAAAGGT+GGG | 0.659091 | 8.2:-4584984 | MS.gene58068:CDS |
AAAGGGAGTTGGAAGCAAGT+CGG | 0.663136 | 8.2:-4584237 | MS.gene58068:CDS |
AGATGGAGTCAGCACAAAGG+CGG | 0.664017 | 8.2:+4582223 | None:intergenic |
AAGGCTGAAACTGCATCATG+AGG | 0.665786 | 8.2:+4585820 | None:intergenic |
GGGATGTGTTATCATCTATG+GGG | 0.670755 | 8.2:-4585378 | MS.gene58068:CDS |
TCCAGATGGAGTCAGCACAA+AGG | 0.671380 | 8.2:+4582220 | None:intergenic |
GGCTCGGTAGTAGATATCGA+AGG | 0.674806 | 8.2:+4584688 | None:intergenic |
TGCTGGAACCTGCAAGATGG+AGG | 0.675263 | 8.2:-4585088 | MS.gene58068:CDS |
GGACAAACCACTGAGCCACA+AGG | 0.677332 | 8.2:+4584390 | None:intergenic |
TGCAAGTCAGAATACGTGAG+TGG | 0.679170 | 8.2:-4584724 | MS.gene58068:CDS |
AAAGTATCATGCAATCTCTG+AGG | 0.685982 | 8.2:-4586667 | MS.gene58068:intron |
GGTACGAAGGACCAATACTG+TGG | 0.689452 | 8.2:+4585554 | None:intergenic |
TAACACTGTAAAGAAACTGG+TGG | 0.718279 | 8.2:-4585881 | MS.gene58068:CDS |
TGTCTGATCAGTATGTGCAG+GGG | 0.719823 | 8.2:-4584816 | MS.gene58068:CDS |
ACGCAATAAACTATACTCTG+AGG | 0.729284 | 8.2:+4583866 | None:intergenic |
ACTTGTGTTTATGCTCCCGG+TGG | 0.737377 | 8.2:-4583801 | MS.gene58068:CDS |
CCAACACGCTGTCATCAAGG+AGG | 0.752025 | 8.2:+4585118 | None:intergenic |
GAATGCCACAGATAAGACAG+CGG | 0.758361 | 8.2:-4584949 | MS.gene58068:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGAATTTAATATTCAAATTT+TGG | - | chr8.2:4582364-4582383 | MS.gene58068:intron | 10.0% |
!! | AAATTAATTAATGATATCAC+TGG | + | chr8.2:4585807-4585826 | None:intergenic | 15.0% |
!! | AATAAATTACATATCTGATT+GGG | - | chr8.2:4586131-4586150 | MS.gene58068:intron | 15.0% |
!! | ACTTATAAATTACATTTCTT+TGG | - | chr8.2:4582957-4582976 | MS.gene58068:CDS | 15.0% |
!! | ATTGAATTATGTAAACAATA+TGG | + | chr8.2:4582626-4582645 | None:intergenic | 15.0% |
!! | CTTATAAATTACATTTCTTT+GGG | - | chr8.2:4582958-4582977 | MS.gene58068:CDS | 15.0% |
!! | TATCAAAAAAGATATCTAAA+GGG | + | chr8.2:4586495-4586514 | None:intergenic | 15.0% |
!! | TTATAAATTACATTTCTTTG+GGG | - | chr8.2:4582959-4582978 | MS.gene58068:CDS | 15.0% |
!! | TTATCAATTATTTATGATTG+TGG | - | chr8.2:4585702-4585721 | MS.gene58068:CDS | 15.0% |
!! | TTGAATTATGTAAACAATAT+GGG | + | chr8.2:4582625-4582644 | None:intergenic | 15.0% |
!!! | TTATTCTTCTTTTTGTTTTT+TGG | - | chr8.2:4582902-4582921 | MS.gene58068:CDS | 15.0% |
!!! | TTTATTTTTAACAAACAACA+AGG | + | chr8.2:4585761-4585780 | None:intergenic | 15.0% |
!! | AGTTTGTGTAATAAAAAAGA+TGG | + | chr8.2:4584830-4584849 | None:intergenic | 20.0% |
!! | ATAAAAAATGTTCTCAGAAA+GGG | - | chr8.2:4584749-4584768 | MS.gene58068:CDS | 20.0% |
!! | ATTTCATTTGAATTTGATTC+TGG | - | chr8.2:4582811-4582830 | MS.gene58068:intron | 20.0% |
!! | CAATAAATTACATATCTGAT+TGG | - | chr8.2:4586130-4586149 | MS.gene58068:intron | 20.0% |
!! | CTATCAAAAAAGATATCTAA+AGG | + | chr8.2:4586496-4586515 | None:intergenic | 20.0% |
!! | TATAAAAAATGTTCTCAGAA+AGG | - | chr8.2:4584748-4584767 | MS.gene58068:CDS | 20.0% |
!! | TATGAATTGTGATAATTATG+AGG | - | chr8.2:4585566-4585585 | MS.gene58068:CDS | 20.0% |
!!! | AAAACAGTTTTCTTTTCTAA+TGG | + | chr8.2:4585259-4585278 | None:intergenic | 20.0% |
!!! | AACAAAGAGAAAATTTCTTT+TGG | - | chr8.2:4586613-4586632 | MS.gene58068:intron | 20.0% |
!!! | AAGTTCGAATTTTACTTTAA+AGG | - | chr8.2:4585633-4585652 | MS.gene58068:CDS | 20.0% |
!!! | AATATTCAAATTTTGGTTTG+TGG | - | chr8.2:4582371-4582390 | MS.gene58068:intron | 20.0% |
!!! | ACTTTCATTTTCTAGTTTTT+AGG | - | chr8.2:4582519-4582538 | MS.gene58068:intron | 20.0% |
!!! | AGTTCGAATTTTACTTTAAA+GGG | - | chr8.2:4585634-4585653 | MS.gene58068:CDS | 20.0% |
!!! | TTTTTTTTTTTGGTTTCCAT+GGG | - | chr8.2:4585388-4585407 | MS.gene58068:CDS | 20.0% |
!!! | TTTTTTTTTTTTGGTTTCCA+TGG | - | chr8.2:4585387-4585406 | MS.gene58068:CDS | 20.0% |
! | AGAAATGGTTCAAAATTTGT+AGG | + | chr8.2:4582449-4582468 | None:intergenic | 25.0% |
! | AGCTTATATATTGTGTTAGT+GGG | - | chr8.2:4582416-4582435 | MS.gene58068:intron | 25.0% |
! | ATATTCATCTTTCAAATGCA+AGG | + | chr8.2:4583962-4583981 | None:intergenic | 25.0% |
! | ATTTGAGAAATATGATTCTG+AGG | - | chr8.2:4583740-4583759 | MS.gene58068:intron | 25.0% |
! | CTTAAAATCTAGCTGTTAAA+GGG | + | chr8.2:4586240-4586259 | None:intergenic | 25.0% |
! | GAAATGGTTCAAAATTTGTA+GGG | + | chr8.2:4582448-4582467 | None:intergenic | 25.0% |
! | GATAAAAAAGATAAGATAGC+CGG | - | chr8.2:4584402-4584421 | MS.gene58068:CDS | 25.0% |
! | GTCACTATATCAAATGTTAT+CGG | - | chr8.2:4582930-4582949 | MS.gene58068:CDS | 25.0% |
! | TAAAAGCTTCATATTTGTCA+TGG | + | chr8.2:4582491-4582510 | None:intergenic | 25.0% |
! | TAATATTGACATATCTGATG+TGG | - | chr8.2:4583587-4583606 | MS.gene58068:intron | 25.0% |
! | TAGCTTATATATTGTGTTAG+TGG | - | chr8.2:4582415-4582434 | MS.gene58068:intron | 25.0% |
! | TTAAAATTGTTCCACAGTAT+TGG | - | chr8.2:4583317-4583336 | MS.gene58068:intron | 25.0% |
!! | ATATGAATGTCATTTGATTC+CGG | - | chr8.2:4582577-4582596 | MS.gene58068:intron | 25.0% |
!! | ATTTCTGCTAAGTTTTTGAT+CGG | - | chr8.2:4582463-4582482 | MS.gene58068:intron | 25.0% |
!! | CTTTAACAGCTAGATTTTAA+GGG | - | chr8.2:4586239-4586258 | MS.gene58068:intron | 25.0% |
!! | TTTTCTTTTCTAATGGAGAA+AGG | + | chr8.2:4585252-4585271 | None:intergenic | 25.0% |
!!! | TAGATATCTTTTTTGATAGC+AGG | - | chr8.2:4586497-4586516 | MS.gene58068:intron | 25.0% |
AAAAAGATATCTAAAGGGAG+AGG | + | chr8.2:4586490-4586509 | None:intergenic | 30.0% | |
AAAAGAACTAGAATGACTGA+GGG | + | chr8.2:4585528-4585547 | None:intergenic | 30.0% | |
AAGTAACGAAGTTACAAAAC+CGG | + | chr8.2:4582338-4582357 | None:intergenic | 30.0% | |
AATACATGAAACTTCATCCA+TGG | + | chr8.2:4584219-4584238 | None:intergenic | 30.0% | |
AATGCCAACAAAATCATAAG+CGG | + | chr8.2:4586586-4586605 | None:intergenic | 30.0% | |
ACAAAGCTTAAAGCTGTTTA+TGG | - | chr8.2:4584604-4584623 | MS.gene58068:intron | 30.0% | |
AGATAAGAAGCCAACTTTAT+CGG | + | chr8.2:4585923-4585942 | None:intergenic | 30.0% | |
AGTAAATGATGACAAGTTGT+TGG | - | chr8.2:4584530-4584549 | MS.gene58068:CDS | 30.0% | |
ATACATGAAACTTCATCCAT+GGG | + | chr8.2:4584218-4584237 | None:intergenic | 30.0% | |
ATTATGTGCTCTTTAATGCT+TGG | - | chr8.2:4582264-4582283 | MS.gene58068:CDS | 30.0% | |
ATTTATCATGCAATTCTTCG+CGG | + | chr8.2:4585951-4585970 | None:intergenic | 30.0% | |
ATTTGTCCAACAATGAAGTT+AGG | + | chr8.2:4586777-4586796 | None:intergenic | 30.0% | |
CAACTTGTCATCATTTACTT+TGG | + | chr8.2:4584529-4584548 | None:intergenic | 30.0% | |
CATTGCATATGATTTGATGT+GGG | + | chr8.2:4586184-4586203 | None:intergenic | 30.0% | |
CCTTAAAATCTAGCTGTTAA+AGG | + | chr8.2:4586241-4586260 | None:intergenic | 30.0% | |
GATCAAAAACTTAGCAGAAA+TGG | + | chr8.2:4582464-4582483 | None:intergenic | 30.0% | |
GCTATATAACAACATTGCTT+GGG | + | chr8.2:4586272-4586291 | None:intergenic | 30.0% | |
TAAAAGAACTAGAATGACTG+AGG | + | chr8.2:4585529-4585548 | None:intergenic | 30.0% | |
TAAAAGCTTCGTATTCGTAA+TGG | + | chr8.2:4582713-4582732 | None:intergenic | 30.0% | |
TGCTATATAACAACATTGCT+TGG | + | chr8.2:4586273-4586292 | None:intergenic | 30.0% | |
TGTTAACACTGTAAAGAAAC+TGG | - | chr8.2:4582998-4583017 | MS.gene58068:CDS | 30.0% | |
TTAATTCAACTGTATGAGTG+AGG | + | chr8.2:4585325-4585344 | None:intergenic | 30.0% | |
TTATTTATGATTGTGGCAAG+AGG | - | chr8.2:4585709-4585728 | MS.gene58068:CDS | 30.0% | |
TTGTTATATAGCAGCTATAG+TGG | - | chr8.2:4586280-4586299 | MS.gene58068:intron | 30.0% | |
! | AAAAGAAAACTGTTTTGCTG+TGG | - | chr8.2:4585263-4585282 | MS.gene58068:intron | 30.0% |
! | ACAATTTAAGCAGAGTTTTG+GGG | - | chr8.2:4582087-4582106 | MS.gene58068:CDS | 30.0% |
! | CACAATTTAAGCAGAGTTTT+GGG | - | chr8.2:4582086-4582105 | MS.gene58068:CDS | 30.0% |
! | CCTTTAACAGCTAGATTTTA+AGG | - | chr8.2:4586238-4586257 | MS.gene58068:intron | 30.0% |
! | TATGATTTTGTTGGCATTAC+AGG | - | chr8.2:4586588-4586607 | MS.gene58068:intron | 30.0% |
! | TCACAATTTAAGCAGAGTTT+TGG | - | chr8.2:4582085-4582104 | MS.gene58068:CDS | 30.0% |
!! | CGAATTTTACTTTAAAGGGA+TGG | - | chr8.2:4585638-4585657 | MS.gene58068:CDS | 30.0% |
!! | GAAAATTTCTTTTGGTTGTC+TGG | - | chr8.2:4586621-4586640 | MS.gene58068:intron | 30.0% |
!! | GCTTGTTTCTAAACAACATA+TGG | - | chr8.2:4586107-4586126 | MS.gene58068:intron | 30.0% |
!! | TAATTGATAACGAACAAGCA+AGG | + | chr8.2:4585692-4585711 | None:intergenic | 30.0% |
!! | TGCAAAGTATTGTCTAATAG+CGG | - | chr8.2:4586350-4586369 | MS.gene58068:intron | 30.0% |
!!! | TCTTTTTTGATAGCAGGAAT+AGG | - | chr8.2:4586503-4586522 | MS.gene58068:intron | 30.0% |
AAAGAACTAGAATGACTGAG+GGG | + | chr8.2:4585527-4585546 | None:intergenic | 35.0% | |
AAATCACTTGCCTAAAATGC+AGG | - | chr8.2:4583112-4583131 | MS.gene58068:intron | 35.0% | |
AAATCATATGCAATGCTCAG+TGG | - | chr8.2:4586189-4586208 | MS.gene58068:intron | 35.0% | |
AACATAGCTCCATTTGATGA+TGG | - | chr8.2:4583557-4583576 | MS.gene58068:intron | 35.0% | |
AAGCTTAAAGCTGTTTATGG+AGG | - | chr8.2:4584607-4584626 | MS.gene58068:intron | 35.0% | |
AATAGGAATACCTCTAGTGA+AGG | + | chr8.2:4585417-4585436 | None:intergenic | 35.0% | |
AATTGCTTGCTCCAAATTCT+TGG | + | chr8.2:4582164-4582183 | None:intergenic | 35.0% | |
ACAGTTCCCTGTATTTAAAG+AGG | - | chr8.2:4583262-4583281 | MS.gene58068:intron | 35.0% | |
ACCAAAGTTCAAATCATAGC+TGG | + | chr8.2:4585461-4585480 | None:intergenic | 35.0% | |
ACGCAATAAACTATACTCTG+AGG | + | chr8.2:4585019-4585038 | None:intergenic | 35.0% | |
AGATTACAGAAAGTGACATC+CGG | + | chr8.2:4582599-4582618 | None:intergenic | 35.0% | |
AGGGATGTGTTATCATCTAT+GGG | - | chr8.2:4583503-4583522 | MS.gene58068:intron | 35.0% | |
AGTTCCTTTGATGCAAAACT+TGG | - | chr8.2:4584242-4584261 | MS.gene58068:CDS | 35.0% | |
ATAGATGATAACACATCCCT+GGG | + | chr8.2:4583503-4583522 | None:intergenic | 35.0% | |
ATAGGAATACCTCTAGTGAA+GGG | + | chr8.2:4585416-4585435 | None:intergenic | 35.0% | |
ATCATAGATGAATCGAGATG+CGG | + | chr8.2:4584345-4584364 | None:intergenic | 35.0% | |
CATCTAAAGATTTACCAGCA+CGG | + | chr8.2:4584281-4584300 | None:intergenic | 35.0% | |
CCAAAGTTCAAATCATAGCT+GGG | + | chr8.2:4585460-4585479 | None:intergenic | 35.0% | |
CGAGAAACGTATTCAAGAAT+TGG | - | chr8.2:4584034-4584053 | MS.gene58068:intron | 35.0% | |
CGCAGTTCATCTATATAAAG+AGG | + | chr8.2:4584924-4584943 | None:intergenic | 35.0% | |
CTATTTATCTGCTGAATCTG+TGG | - | chr8.2:4586723-4586742 | MS.gene58068:CDS | 35.0% | |
GAAAACATGTTGGATTCATC+TGG | - | chr8.2:4584309-4584328 | MS.gene58068:intron | 35.0% | |
GCATGATAAATACACCAGAA+TGG | - | chr8.2:4585960-4585979 | MS.gene58068:intron | 35.0% | |
GCATTGCATATGATTTGATG+TGG | + | chr8.2:4586185-4586204 | None:intergenic | 35.0% | |
GGATCAAAACTTTGCAGAAA+TGG | + | chr8.2:4582687-4582706 | None:intergenic | 35.0% | |
GGTTCAAAATTTGTAGGGAT+AGG | + | chr8.2:4582443-4582462 | None:intergenic | 35.0% | |
GTAGTTTCTGATCTTTGATG+AGG | + | chr8.2:4583244-4583263 | None:intergenic | 35.0% | |
GTGCATCTGTTATTAAGATG+CGG | - | chr8.2:4585037-4585056 | MS.gene58068:intron | 35.0% | |
GTTGAGAATGCAAAACTGAA+AGG | - | chr8.2:4583816-4583835 | MS.gene58068:CDS | 35.0% | |
TAAATACACCAGAATGGATG+CGG | - | chr8.2:4585966-4585985 | MS.gene58068:intron | 35.0% | |
TAACACTGTAAAGAAACTGG+TGG | - | chr8.2:4583001-4583020 | MS.gene58068:CDS | 35.0% | |
TAAGCAAACCCATCATCAAA+TGG | + | chr8.2:4583569-4583588 | None:intergenic | 35.0% | |
TAAGCTTCAACTTGAGAAAC+AGG | - | chr8.2:4586050-4586069 | MS.gene58068:intron | 35.0% | |
TACACAAACTAGCATTCTAC+TGG | - | chr8.2:4584840-4584859 | MS.gene58068:CDS | 35.0% | |
TACATATCTGATTGGGACTT+GGG | - | chr8.2:4586138-4586157 | MS.gene58068:intron | 35.0% | |
TACATCATGAGAGAATCTGA+AGG | - | chr8.2:4585180-4585199 | MS.gene58068:CDS | 35.0% | |
TATAGCAATGTTGTCCACTA+TGG | + | chr8.2:4586376-4586395 | None:intergenic | 35.0% | |
TATGATTTGATGTGGGACTT+AGG | + | chr8.2:4586177-4586196 | None:intergenic | 35.0% | |
TGCAGAAATAGTGAGAAGAA+AGG | - | chr8.2:4583361-4583380 | MS.gene58068:intron | 35.0% | |
TGGTAAATCTTTAGATGGTG+TGG | - | chr8.2:4584284-4584303 | MS.gene58068:intron | 35.0% | |
TTACATATCTGATTGGGACT+TGG | - | chr8.2:4586137-4586156 | MS.gene58068:intron | 35.0% | |
TTCGACAGGATGGTTTATTT+GGG | - | chr8.2:4583291-4583310 | MS.gene58068:intron | 35.0% | |
TTGTCGTGAACATCATACAT+AGG | + | chr8.2:4583092-4583111 | None:intergenic | 35.0% | |
TTTGATGAGGTAAGAAACGT+AGG | + | chr8.2:4583231-4583250 | None:intergenic | 35.0% | |
! | AAAGTATCATGCAATCTCTG+AGG | - | chr8.2:4582215-4582234 | MS.gene58068:CDS | 35.0% |
! | ACATAGCTCCATTTGATGAT+GGG | - | chr8.2:4583558-4583577 | MS.gene58068:intron | 35.0% |
! | ATGTTGACATCACATTGGTT+AGG | + | chr8.2:4583542-4583561 | None:intergenic | 35.0% |
! | CAAACCAAGTTTTGCATCAA+AGG | + | chr8.2:4584249-4584268 | None:intergenic | 35.0% |
! | CCAACACTCGAATACATTTT+CGG | + | chr8.2:4585900-4585919 | None:intergenic | 35.0% |
! | GAACAAGCAAGGAACTTTTT+AGG | + | chr8.2:4585681-4585700 | None:intergenic | 35.0% |
! | TACTCCGCTTATGATTTTGT+TGG | - | chr8.2:4586579-4586598 | MS.gene58068:intron | 35.0% |
! | TTTGATAGCAGGAATAGGTT+TGG | - | chr8.2:4586508-4586527 | MS.gene58068:intron | 35.0% |
! | TTTTCTCCTCCAATTCTTTG+CGG | + | chr8.2:4586005-4586024 | None:intergenic | 35.0% |
!! | AACAGCTAGATTTTAAGGGA+GGG | - | chr8.2:4586243-4586262 | MS.gene58068:intron | 35.0% |
!! | TAACAGCTAGATTTTAAGGG+AGG | - | chr8.2:4586242-4586261 | MS.gene58068:intron | 35.0% |
!! | TTCTTCTCACTATTTCTGCA+AGG | + | chr8.2:4583361-4583380 | None:intergenic | 35.0% |
!! | TTTGGTTTGTGGCTTATATG+TGG | - | chr8.2:4582382-4582401 | MS.gene58068:intron | 35.0% |
!!! | GACTTTCACCTTCTAGTTTT+AGG | - | chr8.2:4582740-4582759 | MS.gene58068:intron | 35.0% |
AACATCATACATAGGACCCA+AGG | + | chr8.2:4583084-4583103 | None:intergenic | 40.0% | |
AAGAACTAGAATGACTGAGG+GGG | + | chr8.2:4585526-4585545 | None:intergenic | 40.0% | |
AAGACTTGTGTTTATGCTCC+CGG | - | chr8.2:4585078-4585097 | MS.gene58068:CDS | 40.0% | |
AAGTTAGGTCTGCTTGAAGA+TGG | + | chr8.2:4586762-4586781 | None:intergenic | 40.0% | |
AATGACTCGTACTCTATCTG+AGG | + | chr8.2:4583883-4583902 | None:intergenic | 40.0% | |
ACAAAGTGCACTTGCAGATA+AGG | - | chr8.2:4584557-4584576 | MS.gene58068:CDS | 40.0% | |
ACAGAACCATCACCGAAATA+AGG | + | chr8.2:4586087-4586106 | None:intergenic | 40.0% | |
ACCATCGCCTCTTTAAATAC+AGG | + | chr8.2:4583272-4583291 | None:intergenic | 40.0% | |
AGATAAGATAGCCGGACAAT+TGG | - | chr8.2:4584410-4584429 | MS.gene58068:CDS | 40.0% | |
AGCAGACCTAACTTCATTGT+TGG | - | chr8.2:4586768-4586787 | MS.gene58068:CDS | 40.0% | |
AGTATCTCAGTCCAGAAAAC+AGG | + | chr8.2:4586559-4586578 | None:intergenic | 40.0% | |
ATGACTCGTACTCTATCTGA+GGG | + | chr8.2:4583882-4583901 | None:intergenic | 40.0% | |
ATGCTCCTGAGTATATAGCA+GGG | - | chr8.2:4583616-4583635 | MS.gene58068:intron | 40.0% | |
ATTGCCTCATAATGTCCAGA+TGG | + | chr8.2:4586679-4586698 | None:intergenic | 40.0% | |
ATTGGAGGAGAAAAGAGATC+AGG | - | chr8.2:4586011-4586030 | MS.gene58068:intron | 40.0% | |
ATTGGGACTTGGGTATTATG+GGG | - | chr8.2:4586148-4586167 | MS.gene58068:intron | 40.0% | |
ATTGTCTGATCAGTATGTGC+AGG | - | chr8.2:4584064-4584083 | MS.gene58068:intron | 40.0% | |
CACTGCTTTGCATTTCTTCA+CGG | + | chr8.2:4584377-4584396 | None:intergenic | 40.0% | |
CAGGGATGTGTTATCATCTA+TGG | - | chr8.2:4583502-4583521 | MS.gene58068:intron | 40.0% | |
CATAGATGATAACACATCCC+TGG | + | chr8.2:4583504-4583523 | None:intergenic | 40.0% | |
CCATCGCCTCTTTAAATACA+GGG | + | chr8.2:4583271-4583290 | None:intergenic | 40.0% | |
CCCAGCTATGATTTGAACTT+TGG | - | chr8.2:4585457-4585476 | MS.gene58068:CDS | 40.0% | |
CCGAAAATGTATTCGAGTGT+TGG | - | chr8.2:4585897-4585916 | MS.gene58068:intron | 40.0% | |
CGCAATGAATCTGCAAAATC+AGG | + | chr8.2:4585111-4585130 | None:intergenic | 40.0% | |
CTTAAAGCTGTTTATGGAGG+AGG | - | chr8.2:4584610-4584629 | MS.gene58068:intron | 40.0% | |
GAAGCTACTTGATGAATCTC+AGG | - | chr8.2:4584667-4584686 | MS.gene58068:CDS | 40.0% | |
GACTCAGTCCTAAAACTAGA+AGG | + | chr8.2:4582751-4582770 | None:intergenic | 40.0% | |
GAGCTATGTTGACATCACAT+TGG | + | chr8.2:4583547-4583566 | None:intergenic | 40.0% | |
GAGGTCATCAATAAGTGCAT+TGG | - | chr8.2:4585585-4585604 | MS.gene58068:CDS | 40.0% | |
GATAAGATAGCCGGACAATT+GGG | - | chr8.2:4584411-4584430 | MS.gene58068:CDS | 40.0% | |
GATTAGTGATAGCTCTCACT+TGG | - | chr8.2:4583689-4583708 | MS.gene58068:intron | 40.0% | |
GATTGGGACTTGGGTATTAT+GGG | - | chr8.2:4586147-4586166 | MS.gene58068:intron | 40.0% | |
GCATCTCGATTCATCTATGA+TGG | - | chr8.2:4584344-4584363 | MS.gene58068:CDS | 40.0% | |
GCTTCTATGAAGCTGTACAT+GGG | - | chr8.2:4583383-4583402 | MS.gene58068:intron | 40.0% | |
GGGATGTGTTATCATCTATG+GGG | - | chr8.2:4583504-4583523 | MS.gene58068:intron | 40.0% | |
GTGCTCTTTAATGCTTGGTT+AGG | - | chr8.2:4582269-4582288 | MS.gene58068:CDS | 40.0% | |
GTTCGACAGGATGGTTTATT+TGG | - | chr8.2:4583290-4583309 | MS.gene58068:intron | 40.0% | |
TAGGAATACCTCTAGTGAAG+GGG | + | chr8.2:4585415-4585434 | None:intergenic | 40.0% | |
TAGTGACAAACCCAATTGTC+CGG | + | chr8.2:4584424-4584443 | None:intergenic | 40.0% | |
TATGCTCCTGAGTATATAGC+AGG | - | chr8.2:4583615-4583634 | MS.gene58068:intron | 40.0% | |
TCACATGATCTTGTACCTTG+TGG | - | chr8.2:4584477-4584496 | MS.gene58068:CDS | 40.0% | |
TCAGATAGAGTACGAGTCAT+TGG | - | chr8.2:4583882-4583901 | MS.gene58068:CDS | 40.0% | |
TCATAGATGAATCGAGATGC+GGG | + | chr8.2:4584344-4584363 | None:intergenic | 40.0% | |
TCATTGGACGATGAAAAGGT+GGG | - | chr8.2:4583898-4583917 | MS.gene58068:CDS | 40.0% | |
TCGACAGGATGGTTTATTTG+GGG | - | chr8.2:4583292-4583311 | MS.gene58068:intron | 40.0% | |
TGATTGGGACTTGGGTATTA+TGG | - | chr8.2:4586146-4586165 | MS.gene58068:intron | 40.0% | |
TGCAGATTCATTGCGCAATT+TGG | - | chr8.2:4585116-4585135 | MS.gene58068:CDS | 40.0% | |
TGGTGTGGATGAAAACATGT+TGG | - | chr8.2:4584299-4584318 | MS.gene58068:intron | 40.0% | |
TTCAACTGTATGAGTGAGGA+AGG | + | chr8.2:4585321-4585340 | None:intergenic | 40.0% | |
TTGTCTGATCAGTATGTGCA+GGG | - | chr8.2:4584065-4584084 | MS.gene58068:intron | 40.0% | |
TTTCTTGGCCACCAAGAATT+TGG | - | chr8.2:4582150-4582169 | MS.gene58068:CDS | 40.0% | |
! | AAATTCTTGGTGGCCAAGAA+AGG | + | chr8.2:4582151-4582170 | None:intergenic | 40.0% |
! | AACTTTGGTTAGCCAAGTTG+TGG | - | chr8.2:4585472-4585491 | MS.gene58068:CDS | 40.0% |
! | ACTTTGGTTAGCCAAGTTGT+GGG | - | chr8.2:4585473-4585492 | MS.gene58068:CDS | 40.0% |
! | CGTGCTGGTAAATCTTTAGA+TGG | - | chr8.2:4584279-4584298 | MS.gene58068:intron | 40.0% |
! | GCTTCGTATTCGTAATGGAA+TGG | + | chr8.2:4582708-4582727 | None:intergenic | 40.0% |
!! | ACTAGAGGTATTCCTATTCG+AGG | - | chr8.2:4585419-4585438 | MS.gene58068:CDS | 40.0% |
!! | CTGAAAGGCTTGCTACAAAA+CGG | - | chr8.2:4583423-4583442 | MS.gene58068:intron | 40.0% |
!! | GGTAGCTTTAAAAGTGCATC+TGG | - | chr8.2:4583663-4583682 | MS.gene58068:intron | 40.0% |
!! | TCGAAGACTTGTTGACCATT+GGG | - | chr8.2:4582125-4582144 | MS.gene58068:CDS | 40.0% |
!! | TGAAAGGCTTGCTACAAAAC+GGG | - | chr8.2:4583424-4583443 | MS.gene58068:intron | 40.0% |
!! | TTTACTTTGGAACCCAAGTC+TGG | + | chr8.2:4584516-4584535 | None:intergenic | 40.0% |
AAAAAAGTTCTGCCGACAGG+AGG | - | chr8.2:4584992-4585011 | MS.gene58068:CDS | 45.0% | |
AAAAAGTTCTGCCGACAGGA+GGG | - | chr8.2:4584993-4585012 | MS.gene58068:CDS | 45.0% | |
AAAGGGAGTTGGAAGCAAGT+CGG | - | chr8.2:4584645-4584664 | MS.gene58068:CDS | 45.0% | |
AAATTACATCTTCCGTCCCC+CGG | - | chr8.2:4585220-4585239 | MS.gene58068:CDS | 45.0% | |
AAGGCTGAAACTGCATCATG+AGG | + | chr8.2:4583065-4583084 | None:intergenic | 45.0% | |
AATTGCTGGAACCTGCAAGA+TGG | - | chr8.2:4583791-4583810 | MS.gene58068:CDS | 45.0% | |
ACAACTCTGTTTGCAAGTGC+TGG | - | chr8.2:4586451-4586470 | MS.gene58068:intron | 45.0% | |
ACGAAGCGAGGATGACAATT+GGG | + | chr8.2:4583042-4583061 | None:intergenic | 45.0% | |
AGAACTAGAATGACTGAGGG+GGG | + | chr8.2:4585525-4585544 | None:intergenic | 45.0% | |
ATAGATGAACTGCGCTCACT+TGG | - | chr8.2:4584930-4584949 | MS.gene58068:CDS | 45.0% | |
ATATAGCAGGGGCTACTTAC+AGG | - | chr8.2:4583628-4583647 | MS.gene58068:intron | 45.0% | |
ATCTCAGTCCAGAAAACAGG+TGG | + | chr8.2:4586556-4586575 | None:intergenic | 45.0% | |
ATTCTCAACCTCCATCTTGC+AGG | + | chr8.2:4583805-4583824 | None:intergenic | 45.0% | |
CAAAACCGGATAACACGTCA+AGG | + | chr8.2:4582324-4582343 | None:intergenic | 45.0% | |
CAAACAGCTCCGCAAAGAAT+TGG | - | chr8.2:4585993-4586012 | MS.gene58068:intron | 45.0% | |
CAACTCTGTTTGCAAGTGCT+GGG | - | chr8.2:4586452-4586471 | MS.gene58068:intron | 45.0% | |
CACAAAAAAGTTCTGCCGAC+AGG | - | chr8.2:4584989-4585008 | MS.gene58068:CDS | 45.0% | |
CATGATGCAGTTTCAGCCTT+GGG | - | chr8.2:4583065-4583084 | MS.gene58068:intron | 45.0% | |
CATTGGACGATGAAAAGGTG+GGG | - | chr8.2:4583899-4583918 | MS.gene58068:CDS | 45.0% | |
CCCTGTATTTAAAGAGGCGA+TGG | - | chr8.2:4583268-4583287 | MS.gene58068:intron | 45.0% | |
CGAGTCATTGGACGATGAAA+AGG | - | chr8.2:4583894-4583913 | MS.gene58068:CDS | 45.0% | |
CTTGACCTTGACGTGTTATC+CGG | - | chr8.2:4582316-4582335 | MS.gene58068:intron | 45.0% | |
CTTGGAGAATTGTTTGCACG+AGG | - | chr8.2:4584948-4584967 | MS.gene58068:CDS | 45.0% | |
CTTTGCATTTCTTCACGGTG+AGG | + | chr8.2:4584372-4584391 | None:intergenic | 45.0% | |
GAATGCCACAGATAAGACAG+CGG | - | chr8.2:4583933-4583952 | MS.gene58068:CDS | 45.0% | |
GACTCCATCTGGACATTATG+AGG | - | chr8.2:4586672-4586691 | MS.gene58068:CDS | 45.0% | |
GCGCAATTTGGCACAATCTT+TGG | - | chr8.2:4585128-4585147 | MS.gene58068:CDS | 45.0% | |
GCTGAGGCTGTAGATATTTC+AGG | - | chr8.2:4583711-4583730 | MS.gene58068:intron | 45.0% | |
GGCTTCTATGAAGCTGTACA+TGG | - | chr8.2:4583382-4583401 | MS.gene58068:intron | 45.0% | |
GGTACAAGATCATGTGACAC+AGG | + | chr8.2:4584474-4584493 | None:intergenic | 45.0% | |
GTCATTGGACGATGAAAAGG+TGG | - | chr8.2:4583897-4583916 | MS.gene58068:CDS | 45.0% | |
GTTCAAATCATAGCTGGGAG+AGG | + | chr8.2:4585455-4585474 | None:intergenic | 45.0% | |
TAATGGAGAAAGGATGCGAC+CGG | + | chr8.2:4585242-4585261 | None:intergenic | 45.0% | |
TAGCAAGCCTTTCAGCCAAT+TGG | + | chr8.2:4583418-4583437 | None:intergenic | 45.0% | |
TATGAAGCTGTACATGGGCA+TGG | - | chr8.2:4583388-4583407 | MS.gene58068:intron | 45.0% | |
TCATGATGCAGTTTCAGCCT+TGG | - | chr8.2:4583064-4583083 | MS.gene58068:intron | 45.0% | |
TGAAACTTCATCCATGGGCT+CGG | + | chr8.2:4584213-4584232 | None:intergenic | 45.0% | |
TGCAAAATCAGGAACACCAC+CGG | + | chr8.2:4585100-4585119 | None:intergenic | 45.0% | |
TGCAAGTCAGAATACGTGAG+TGG | - | chr8.2:4584158-4584177 | MS.gene58068:intron | 45.0% | |
TGCTCCTGAGTATATAGCAG+GGG | - | chr8.2:4583617-4583636 | MS.gene58068:intron | 45.0% | |
TGCTTGCTCCAAATTCTTGG+TGG | + | chr8.2:4582161-4582180 | None:intergenic | 45.0% | |
TGTCTGATCAGTATGTGCAG+GGG | - | chr8.2:4584066-4584085 | MS.gene58068:intron | 45.0% | |
TTCTTTGCGGAGCTGTTTGT+TGG | + | chr8.2:4585992-4586011 | None:intergenic | 45.0% | |
TTGGGACTTGGGTATTATGG+GGG | - | chr8.2:4586149-4586168 | MS.gene58068:intron | 45.0% | |
TTGTCTAATAGCGGCCATAG+TGG | - | chr8.2:4586359-4586378 | MS.gene58068:intron | 45.0% | |
! | AACTCTGTTTGCAAGTGCTG+GGG | - | chr8.2:4586453-4586472 | MS.gene58068:intron | 45.0% |
! | AGCGTGTTGGTAGAAATTGC+TGG | - | chr8.2:4583777-4583796 | MS.gene58068:CDS | 45.0% |
! | AGTGGAGTACTTCAGTGACT+TGG | - | chr8.2:4586207-4586226 | MS.gene58068:intron | 45.0% |
! | CGATCACAAGCCTGCATTTT+AGG | + | chr8.2:4583125-4583144 | None:intergenic | 45.0% |
! | GACGACTTTATGAGAGTGCA+TGG | - | chr8.2:4583467-4583486 | MS.gene58068:intron | 45.0% |
! | TACGAGTTCCACCTGTTTTC+TGG | - | chr8.2:4586545-4586564 | MS.gene58068:intron | 45.0% |
! | TCAGTGGTTTGTCCAGACTT+GGG | - | chr8.2:4584501-4584520 | MS.gene58068:CDS | 45.0% |
!! | ACTGTTTTGCTGTGGACTTG+TGG | - | chr8.2:4585271-4585290 | MS.gene58068:intron | 45.0% |
!! | CTATTTCTGCAAGGCAAGCT+CGG | + | chr8.2:4583352-4583371 | None:intergenic | 45.0% |
!! | GTCGAAGACTTGTTGACCAT+TGG | - | chr8.2:4582124-4582143 | MS.gene58068:CDS | 45.0% |
!!! | TACTTTATTTTTTTTTTTTT+TGG | - | chr8.2:4585378-4585397 | MS.gene58068:CDS | 5.0% |
AATGGAGAAAGGATGCGACC+GGG | + | chr8.2:4585241-4585260 | None:intergenic | 50.0% | |
ACAGCTCCGCAAAGAATTGG+AGG | - | chr8.2:4585996-4586015 | MS.gene58068:intron | 50.0% | |
ACTTACAGGCTGGAGAAGCA+TGG | - | chr8.2:4583642-4583661 | MS.gene58068:intron | 50.0% | |
ACTTGTGTTTATGCTCCCGG+TGG | - | chr8.2:4585081-4585100 | MS.gene58068:CDS | 50.0% | |
AGATGGAGTCAGCACAAAGG+CGG | + | chr8.2:4586662-4586681 | None:intergenic | 50.0% | |
AGGAGGTTGCTGTGCTCAAA+AGG | - | chr8.2:4584627-4584646 | MS.gene58068:intron | 50.0% | |
CTACCAACACGCTGTCATCA+AGG | + | chr8.2:4583770-4583789 | None:intergenic | 50.0% | |
GACGAAGCGAGGATGACAAT+TGG | + | chr8.2:4583043-4583062 | None:intergenic | 50.0% | |
GATATCTACTACCGAGCCCA+TGG | - | chr8.2:4584199-4584218 | MS.gene58068:intron | 50.0% | |
GCAAAATCAGGAACACCACC+GGG | + | chr8.2:4585099-4585118 | None:intergenic | 50.0% | |
GCATCTGCTTCATCTGAGCA+TGG | + | chr8.2:4584001-4584020 | None:intergenic | 50.0% | |
GCCAGCAAGAAGAGGAAAGT+CGG | + | chr8.2:4584120-4584139 | None:intergenic | 50.0% | |
GGAGGTTGCTGTGCTCAAAA+GGG | - | chr8.2:4584628-4584647 | MS.gene58068:intron | 50.0% | |
GGTACGAAGGACCAATACTG+TGG | + | chr8.2:4583331-4583350 | None:intergenic | 50.0% | |
GTAGCCCCTGCTATATACTC+AGG | + | chr8.2:4583624-4583643 | None:intergenic | 50.0% | |
GTATTCCTATTCGAGGTCCG+TGG | - | chr8.2:4585426-4585445 | MS.gene58068:CDS | 50.0% | |
GTCGGCAGCATCATTTACAC+TGG | + | chr8.2:4584102-4584121 | None:intergenic | 50.0% | |
GTTGACCATTGGGCCTTTCT+TGG | - | chr8.2:4582135-4582154 | MS.gene58068:CDS | 50.0% | |
GTTTGTTCACAGAACCGTGC+TGG | - | chr8.2:4584264-4584283 | MS.gene58068:CDS | 50.0% | |
TAAAGAGGCGATGGTTCGAC+AGG | - | chr8.2:4583277-4583296 | MS.gene58068:intron | 50.0% | |
TCCAGATGGAGTCAGCACAA+AGG | + | chr8.2:4586665-4586684 | None:intergenic | 50.0% | |
TCTTGTACCTTGTGGCTCAG+TGG | - | chr8.2:4584485-4584504 | MS.gene58068:CDS | 50.0% | |
TGATAGCTCTCACTTGGCTG+AGG | - | chr8.2:4583695-4583714 | MS.gene58068:intron | 50.0% | |
TGCTACAAAACGGGAGCTTG+AGG | - | chr8.2:4583433-4583452 | MS.gene58068:intron | 50.0% | |
TGCTGTGCTCAAAAGGGAGT+TGG | - | chr8.2:4584634-4584653 | MS.gene58068:intron | 50.0% | |
TTTCCTCTTCTTGCTGGCAG+CGG | - | chr8.2:4584122-4584141 | MS.gene58068:intron | 50.0% | |
TTTGTTGGCCGCATCCATTC+TGG | + | chr8.2:4585977-4585996 | None:intergenic | 50.0% | |
! | CTCAGTGGTTTGTCCAGACT+TGG | - | chr8.2:4584500-4584519 | MS.gene58068:CDS | 50.0% |
! | GGCTCGGTAGTAGATATCGA+AGG | + | chr8.2:4584197-4584216 | None:intergenic | 50.0% |
!! | ATAGCTGGGAGAGGTATCCA+CGG | + | chr8.2:4585446-4585465 | None:intergenic | 50.0% |
!! | CGAGTGTTGGCCGATAAAGT+TGG | - | chr8.2:4585910-4585929 | MS.gene58068:intron | 50.0% |
AAGCTGTACATGGGCATGGC+TGG | - | chr8.2:4583392-4583411 | MS.gene58068:intron | 55.0% | |
ATGGAGAAAGGATGCGACCG+GGG | + | chr8.2:4585240-4585259 | None:intergenic | 55.0% | |
CCAACACGCTGTCATCAAGG+AGG | + | chr8.2:4583767-4583786 | None:intergenic | 55.0% | |
CTAGAATGACTGAGGGGGGT+TGG | + | chr8.2:4585521-4585540 | None:intergenic | 55.0% | |
GCATGGTTCGTGCATTCCCA+GGG | - | chr8.2:4583484-4583503 | MS.gene58068:intron | 55.0% | |
GCTGTGGACTTGTGGTAGTC+TGG | - | chr8.2:4585279-4585298 | MS.gene58068:intron | 55.0% | |
GGACAAACCACTGAGCCACA+AGG | + | chr8.2:4584495-4584514 | None:intergenic | 55.0% | |
GGCTTCCGCTGTCTTATCTG+TGG | + | chr8.2:4583941-4583960 | None:intergenic | 55.0% | |
GGTATCCACGGACCTCGAAT+AGG | + | chr8.2:4585434-4585453 | None:intergenic | 55.0% | |
TGCATCATGAGGACGAAGCG+AGG | + | chr8.2:4583054-4583073 | None:intergenic | 55.0% | |
TGCATGGTTCGTGCATTCCC+AGG | - | chr8.2:4583483-4583502 | MS.gene58068:intron | 55.0% | |
TGCTGGAACCTGCAAGATGG+AGG | - | chr8.2:4583794-4583813 | MS.gene58068:CDS | 55.0% | |
TTCCTCTTCTTGCTGGCAGC+GGG | - | chr8.2:4584123-4584142 | MS.gene58068:intron | 55.0% | |
TTGTTTGCACGAGGCGAGAG+AGG | - | chr8.2:4584957-4584976 | MS.gene58068:CDS | 55.0% | |
! | CCTCCTTGATGACAGCGTGT+TGG | - | chr8.2:4583764-4583783 | MS.gene58068:CDS | 55.0% |
! | GCCGACTTTCCTCTTCTTGC+TGG | - | chr8.2:4584116-4584135 | MS.gene58068:intron | 55.0% |
! | TGGCTGGCCAATTGGCTGAA+AGG | - | chr8.2:4583408-4583427 | MS.gene58068:intron | 55.0% |
!! | ATACTCTGAGGCCCTCCTGT+CGG | + | chr8.2:4585007-4585026 | None:intergenic | 55.0% |
!! | GCCTTTGTGCTGACTCCATC+TGG | - | chr8.2:4586661-4586680 | MS.gene58068:intron | 55.0% |
AGCAGGGGCTACTTACAGGC+TGG | - | chr8.2:4583632-4583651 | MS.gene58068:intron | 60.0% | |
CACAGGCATGCTCTCAGCAG+TGG | + | chr8.2:4584457-4584476 | None:intergenic | 60.0% | |
CCATGGGTCCCCTTCACTAG+AGG | - | chr8.2:4585404-4585423 | MS.gene58068:CDS | 60.0% | |
CCTCTAGTGAAGGGGACCCA+TGG | + | chr8.2:4585407-4585426 | None:intergenic | 60.0% | |
CTGAGGGGGGTTGGATCTAG+CGG | + | chr8.2:4585512-4585531 | None:intergenic | 60.0% | |
GAGGCGATGGTTCGACAGGA+TGG | - | chr8.2:4583281-4583300 | MS.gene58068:intron | 60.0% | |
GCAAGGCAAGCTCGGTACGA+AGG | + | chr8.2:4583344-4583363 | None:intergenic | 60.0% | |
GGAGCTTGAGGTCTCGAGAC+GGG | - | chr8.2:4583445-4583464 | MS.gene58068:intron | 60.0% | |
GGGAGCTTGAGGTCTCGAGA+CGG | - | chr8.2:4583444-4583463 | MS.gene58068:intron | 60.0% | |
GGGGCAAGACTCCCACAACT+TGG | + | chr8.2:4585487-4585506 | None:intergenic | 60.0% | |
GGGGGTTGGATCTAGCGGAA+GGG | + | chr8.2:4585507-4585526 | None:intergenic | 60.0% | |
GGGGTTGGATCTAGCGGAAG+GGG | + | chr8.2:4585506-4585525 | None:intergenic | 60.0% | |
GGTGGCCAAGAAAGGCCCAA+TGG | + | chr8.2:4582143-4582162 | None:intergenic | 60.0% | |
TGGAGAAAGGATGCGACCGG+GGG | + | chr8.2:4585239-4585258 | None:intergenic | 60.0% | |
TTCCCGCTGCCAGCAAGAAG+AGG | + | chr8.2:4584128-4584147 | None:intergenic | 60.0% | |
! | CATGGGCATGGCTGGCCAAT+TGG | - | chr8.2:4583400-4583419 | MS.gene58068:intron | 60.0% |
GAAAGGATGCGACCGGGGGA+CGG | + | chr8.2:4585235-4585254 | None:intergenic | 65.0% | |
GGGGGGTTGGATCTAGCGGA+AGG | + | chr8.2:4585508-4585527 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 4582082 | 4586822 | 4582082 | ID=MS.gene58068 |
chr8.2 | mRNA | 4582082 | 4586822 | 4582082 | ID=MS.gene58068.t1;Parent=MS.gene58068 |
chr8.2 | exon | 4586668 | 4586822 | 4586668 | ID=MS.gene58068.t1.exon1;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4586668 | 4586822 | 4586668 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
chr8.2 | exon | 4585325 | 4585912 | 4585325 | ID=MS.gene58068.t1.exon2;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4585325 | 4585912 | 4585325 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
chr8.2 | exon | 4585067 | 4585254 | 4585067 | ID=MS.gene58068.t1.exon3;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4585067 | 4585254 | 4585067 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
chr8.2 | exon | 4584914 | 4585014 | 4584914 | ID=MS.gene58068.t1.exon4;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4584914 | 4585014 | 4584914 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
chr8.2 | exon | 4584641 | 4584875 | 4584641 | ID=MS.gene58068.t1.exon5;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4584641 | 4584875 | 4584641 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
chr8.2 | exon | 4584326 | 4584606 | 4584326 | ID=MS.gene58068.t1.exon6;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4584326 | 4584606 | 4584326 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
chr8.2 | exon | 4584216 | 4584287 | 4584216 | ID=MS.gene58068.t1.exon7;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4584216 | 4584287 | 4584216 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
chr8.2 | exon | 4583750 | 4583970 | 4583750 | ID=MS.gene58068.t1.exon8;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4583750 | 4583970 | 4583750 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
chr8.2 | exon | 4582833 | 4583046 | 4582833 | ID=MS.gene58068.t1.exon9;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4582833 | 4583046 | 4582833 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
chr8.2 | exon | 4582082 | 4582294 | 4582082 | ID=MS.gene58068.t1.exon10;Parent=MS.gene58068.t1 |
chr8.2 | CDS | 4582082 | 4582294 | 4582082 | ID=cds.MS.gene58068.t1;Parent=MS.gene58068.t1 |
Gene Sequence |
Protein sequence |