AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58364

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58364.t1 MTR_2g078700 96.345 383 12 1 1 383 1 381 0.0 770
MS.gene58364.t1 MTR_4g108760 52.922 308 92 9 23 326 17 275 2.26e-90 276
MS.gene58364.t1 MTR_3g435150 55.390 269 87 5 23 287 16 255 1.32e-89 272
MS.gene58364.t1 MTR_6g012670 49.492 295 105 6 22 316 19 269 2.18e-86 265
MS.gene58364.t1 MTR_6g032770 46.918 292 127 7 23 314 18 281 1.58e-81 254
MS.gene58364.t1 MTR_7g085260 59.809 209 65 3 23 229 17 208 2.60e-81 254
MS.gene58364.t1 MTR_3g109340 58.373 209 82 2 23 230 22 226 8.93e-81 251
MS.gene58364.t1 MTR_1g008740 68.862 167 48 2 11 176 1 164 9.21e-81 251
MS.gene58364.t1 MTR_6g084430 74.522 157 34 3 20 176 2 152 1.00e-80 250
MS.gene58364.t1 MTR_1g008740 68.862 167 48 2 11 176 15 178 1.60e-80 251
MS.gene58364.t1 MTR_3g109340 57.895 209 84 2 23 230 22 227 3.70e-80 250
MS.gene58364.t1 MTR_3g070030 55.172 232 84 4 9 239 5 217 6.03e-80 249
MS.gene58364.t1 MTR_7g011130 52.846 246 83 5 8 239 4 230 6.77e-76 239
MS.gene58364.t1 MTR_7g011120 66.471 170 48 2 18 180 3 170 7.65e-73 229
MS.gene58364.t1 MTR_3g116070 73.103 145 35 2 23 166 23 164 3.01e-71 227
MS.gene58364.t1 MTR_2g064470 47.148 263 94 9 20 282 8 225 8.27e-66 211
MS.gene58364.t1 MTR_3g070040 50.893 224 86 6 18 239 3 204 2.56e-63 206
MS.gene58364.t1 MTR_1g069805 55.556 162 66 1 21 182 8 163 1.19e-61 199
MS.gene58364.t1 MTR_4g035590 58.642 162 57 3 19 177 4 158 3.26e-59 196
MS.gene58364.t1 MTR_7g097090 56.494 154 61 1 21 174 8 155 1.43e-58 192
MS.gene58364.t1 MTR_4g101680 57.485 167 56 5 18 178 2 159 1.46e-58 194
MS.gene58364.t1 MTR_4g036030 54.878 164 65 3 18 178 2 159 2.42e-58 193
MS.gene58364.t1 MTR_4g089135 51.667 180 66 3 22 180 14 193 2.69e-57 191
MS.gene58364.t1 MTR_2g064090 59.615 156 58 3 23 176 6 158 2.86e-57 191
MS.gene58364.t1 MTR_2g062730 55.346 159 63 3 23 178 10 163 3.54e-57 190
MS.gene58364.t1 MTR_7g085220 51.397 179 78 2 22 191 7 185 6.64e-57 189
MS.gene58364.t1 MTR_7g100990 55.488 164 71 1 14 175 2 165 1.80e-56 188
MS.gene58364.t1 MTR_5g021710 50.000 176 73 4 17 186 2 168 1.90e-56 189
MS.gene58364.t1 MTR_5g012080 54.658 161 66 3 18 175 2 158 2.20e-56 188
MS.gene58364.t1 MTR_5g041940 53.797 158 69 2 22 177 2 157 3.11e-56 185
MS.gene58364.t1 MTR_2g080010 54.217 166 67 2 22 178 14 179 3.23e-56 188
MS.gene58364.t1 MTR_8g024480 51.765 170 70 4 18 177 10 177 3.95e-56 190
MS.gene58364.t1 MTR_2157s0010 54.938 162 65 3 23 176 8 169 4.12e-56 185
MS.gene58364.t1 MTR_6g477900 49.738 191 85 5 23 210 6 188 9.03e-56 183
MS.gene58364.t1 MTR_4g081870 52.795 161 72 2 21 179 7 165 1.51e-54 181
MS.gene58364.t1 MTR_8g059170 55.000 160 70 1 19 178 10 167 2.16e-54 182
MS.gene58364.t1 MTR_5g076850 46.818 220 104 4 23 240 6 214 3.52e-54 189
MS.gene58364.t1 MTR_3g088110 54.938 162 67 3 19 178 3 160 4.16e-54 181
MS.gene58364.t1 MTR_2g093810 55.346 159 69 1 19 175 10 168 5.74e-54 181
MS.gene58364.t1 MTR_7g005280 51.462 171 74 3 18 186 10 173 8.72e-54 179
MS.gene58364.t1 MTR_8g076110 50.000 164 73 3 23 183 6 163 6.40e-53 178
MS.gene58364.t1 MTR_2g079990 54.321 162 62 3 23 180 16 169 1.12e-52 179
MS.gene58364.t1 MTR_8g467490 37.363 273 119 4 25 278 16 255 1.32e-52 180
MS.gene58364.t1 MTR_3g064580 57.692 156 61 4 23 176 6 158 2.84e-52 184
MS.gene58364.t1 MTR_5g014300 34.582 347 165 11 21 342 4 313 1.26e-51 176
MS.gene58364.t1 MTR_8g094580 54.140 157 63 3 23 175 7 158 3.50e-51 173
MS.gene58364.t1 MTR_6g011860 51.515 165 68 3 23 178 15 176 3.50e-51 176
MS.gene58364.t1 MTR_2g079990 48.370 184 67 3 23 180 16 197 3.77e-51 176
MS.gene58364.t1 MTR_1g096430 50.314 159 64 4 23 175 7 156 1.75e-50 172
MS.gene58364.t1 MTR_3g096920 52.532 158 71 2 20 176 4 158 2.56e-50 171
MS.gene58364.t1 MTR_6g059440 87.234 141 13 2 164 304 38 173 4.78e-50 167
MS.gene58364.t1 MTR_5g040420 48.485 165 79 2 20 178 11 175 5.64e-50 172
MS.gene58364.t1 MTR_3g096140 53.165 158 66 4 25 179 9 161 1.64e-48 166
MS.gene58364.t1 MTR_4g098630 42.387 243 108 9 21 239 4 238 4.54e-48 166
MS.gene58364.t1 MTR_3g096920 58.779 131 51 1 20 150 4 131 6.81e-48 166
MS.gene58364.t1 MTR_3g096140 53.165 158 66 4 25 179 9 161 7.17e-48 166
MS.gene58364.t1 MTR_4g134460 51.316 152 69 2 25 176 56 202 6.85e-47 166
MS.gene58364.t1 MTR_5g090970 39.815 216 119 4 11 218 6 218 4.59e-46 160
MS.gene58364.t1 MTR_1g097300 51.266 158 69 4 25 179 21 173 9.02e-46 165
MS.gene58364.t1 MTR_5g069030 46.632 193 80 5 23 201 25 208 1.76e-45 165
MS.gene58364.t1 MTR_0036s0150 51.875 160 65 5 25 179 7 159 2.07e-45 164
MS.gene58364.t1 MTR_3g093050 46.154 195 82 5 23 203 22 207 5.59e-45 163
MS.gene58364.t1 MTR_3g093050 46.154 195 82 5 23 203 22 207 7.13e-45 164
MS.gene58364.t1 MTR_8g063550 48.750 160 74 4 23 179 6 160 2.19e-44 157
MS.gene58364.t1 MTR_5g090970 39.815 216 118 5 11 218 6 217 2.76e-44 155
MS.gene58364.t1 MTR_1g090723 49.375 160 69 5 25 179 10 162 3.42e-44 161
MS.gene58364.t1 MTR_1g090723 49.375 160 69 5 25 179 10 162 3.68e-44 162
MS.gene58364.t1 MTR_1g090723 50.000 160 69 5 25 179 10 163 3.68e-44 162
MS.gene58364.t1 MTR_1g090720 50.920 163 72 3 23 179 42 202 3.69e-44 159
MS.gene58364.t1 MTR_8g063550 48.428 159 76 3 23 179 6 160 5.22e-44 158
MS.gene58364.t1 MTR_8g063550 48.750 160 74 4 23 179 6 160 9.42e-44 157
MS.gene58364.t1 MTR_3g093040 47.486 179 71 5 23 187 108 277 1.57e-43 154
MS.gene58364.t1 MTR_8g093580 47.799 159 77 3 23 179 6 160 7.95e-43 156
MS.gene58364.t1 MTR_2g086880 49.677 155 64 4 25 178 20 161 2.20e-41 152
MS.gene58364.t1 MTR_2g086880 49.677 155 64 4 25 178 20 161 5.28e-41 152
MS.gene58364.t1 MTR_2g068880 50.694 144 67 3 11 150 9 152 1.68e-40 145
MS.gene58364.t1 MTR_2g068920 52.206 136 61 3 19 150 16 151 9.02e-40 143
MS.gene58364.t1 MTR_4g097490 82.474 97 10 2 208 304 1 90 2.60e-39 137
MS.gene58364.t1 MTR_4g075980 51.969 127 60 1 25 150 17 143 2.78e-39 142
MS.gene58364.t1 MTR_8g099750 41.818 165 91 2 18 179 9 171 7.38e-39 139
MS.gene58364.t1 MTR_3g096140 50.694 144 63 4 39 179 2 140 2.38e-38 140
MS.gene58364.t1 MTR_8g023840 52.482 141 61 4 11 148 1 138 2.63e-37 139
MS.gene58364.t1 MTR_5g039560 87.368 95 8 1 208 302 1 91 1.68e-36 132
MS.gene58364.t1 MTR_3g098810 43.023 172 88 5 18 181 9 178 1.50e-35 130
MS.gene58364.t1 MTR_8g023860 50.000 130 61 3 22 148 11 139 2.69e-34 131
MS.gene58364.t1 MTR_3g098810 45.324 139 72 2 14 150 5 141 1.57e-33 123
MS.gene58364.t1 MTR_4g052620 46.970 132 64 3 23 149 5 135 2.36e-33 125
MS.gene58364.t1 MTR_2g086690 44.697 132 66 3 24 149 5 135 1.57e-31 120
MS.gene58364.t1 MTR_1g102520 85.567 97 10 1 208 304 1 93 1.18e-30 113
MS.gene58364.t1 MTR_8g023900 35.749 207 104 5 23 226 12 192 6.67e-30 120
MS.gene58364.t1 MTR_8g023900 36.517 178 102 4 26 200 196 365 1.09e-27 114
MS.gene58364.t1 MTR_8g094580 54.630 108 40 3 72 175 2 104 7.14e-30 115
MS.gene58364.t1 MTR_8g023930 32.895 228 142 5 23 247 24 243 5.83e-29 117
MS.gene58364.t1 MTR_7g105170 39.024 164 90 6 23 177 4 166 1.62e-28 112
MS.gene58364.t1 MTR_8g023880 44.056 143 60 5 23 148 7 146 4.29e-28 111
MS.gene58364.t1 MTR_4g094302 35.329 167 93 3 23 182 11 169 5.12e-28 109
MS.gene58364.t1 MTR_4g094302 40.625 128 68 1 23 150 11 130 2.42e-27 106
MS.gene58364.t1 MTR_7g070140 56.000 75 33 0 76 150 17 91 1.39e-24 98.2
MS.gene58364.t1 MTR_8g093790 37.267 161 69 6 19 175 6 138 1.47e-20 88.6
MS.gene58364.t1 MTR_3g096400 35.583 163 85 7 23 174 7 160 1.02e-18 84.3
MS.gene58364.t1 MTR_7g083360 33.835 133 82 5 18 148 5 133 1.31e-18 82.4
MS.gene58364.t1 MTR_7g083370 33.333 135 80 5 18 148 5 133 1.52e-16 76.3
MS.gene58364.t1 MTR_7g083330 34.375 128 78 5 23 148 18 141 3.40e-16 76.6
MS.gene58364.t1 MTR_4g088245 31.217 189 99 8 23 190 68 246 1.30e-13 71.6
MS.gene58364.t1 MTR_7g070150 48.333 60 26 1 116 175 3 57 1.75e-12 63.2
MS.gene58364.t1 MTR_4g078875 32.877 146 76 6 23 150 48 189 4.16e-12 66.6
MS.gene58364.t1 MTR_2g014680 29.412 204 114 10 23 207 53 245 9.96e-12 65.9
MS.gene58364.t1 MTR_8g069160 30.000 160 93 5 7 150 52 208 7.01e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58364.t1 AT5G53950 51.951 410 135 14 1 383 1 375 1.20e-120 354
MS.gene58364.t1 AT3G15170 76.506 166 39 0 20 185 17 182 8.99e-92 278
MS.gene58364.t1 AT5G61430 68.421 209 44 4 23 231 16 202 1.94e-90 276
MS.gene58364.t1 AT5G07680 48.457 324 113 7 1 324 1 270 6.76e-89 271
MS.gene58364.t1 AT5G07680 50.662 302 101 6 23 324 3 256 1.27e-88 270
MS.gene58364.t1 AT5G18270 57.205 229 86 3 23 251 21 237 5.08e-84 259
MS.gene58364.t1 AT5G18270 56.769 229 87 3 23 251 21 237 7.82e-84 259
MS.gene58364.t1 AT3G29035 55.556 261 71 6 23 274 24 248 3.06e-83 256
MS.gene58364.t1 AT5G39610 76.433 157 35 1 23 179 20 174 4.66e-82 253
MS.gene58364.t1 AT3G18400 73.885 157 36 2 20 176 2 153 6.16e-81 251
MS.gene58364.t1 AT2G24430 67.232 177 46 3 1 176 1 166 1.93e-80 249
MS.gene58364.t1 AT2G24430 67.232 177 46 3 1 176 1 166 1.93e-80 249
MS.gene58364.t1 AT3G04060 58.605 215 72 4 13 227 10 207 2.54e-79 247
MS.gene58364.t1 AT1G76420 52.361 233 102 2 23 255 22 245 5.58e-77 241
MS.gene58364.t1 AT3G12977 54.444 180 77 3 12 190 7 182 9.44e-67 213
MS.gene58364.t1 AT1G56010 45.000 260 105 9 11 267 7 231 2.31e-62 203
MS.gene58364.t1 AT4G10350 51.256 199 78 5 19 210 5 191 3.49e-60 198
MS.gene58364.t1 AT5G61430 64.375 160 35 4 72 231 2 139 7.01e-59 192
MS.gene58364.t1 AT1G12260 56.522 161 61 3 18 175 2 156 4.01e-58 194
MS.gene58364.t1 AT1G12260 56.522 161 61 3 18 175 2 156 4.27e-58 192
MS.gene58364.t1 AT1G33280 55.556 162 62 3 19 177 4 158 6.10e-58 191
MS.gene58364.t1 AT2G46770 47.549 204 89 5 18 205 11 212 1.02e-57 192
MS.gene58364.t1 AT4G28530 44.444 225 91 4 23 231 10 216 5.27e-57 190
MS.gene58364.t1 AT2G18060 50.877 171 75 3 23 190 9 173 1.92e-56 189
MS.gene58364.t1 AT2G18060 50.877 171 75 3 23 190 9 173 1.92e-56 189
MS.gene58364.t1 AT1G62700 56.098 164 57 4 18 175 2 156 1.98e-56 190
MS.gene58364.t1 AT1G62700 56.098 164 57 4 18 175 2 156 1.98e-56 190
MS.gene58364.t1 AT3G04070 51.705 176 77 2 23 190 10 185 3.88e-56 187
MS.gene58364.t1 AT5G62380 47.087 206 91 5 21 217 5 201 7.22e-56 187
MS.gene58364.t1 AT5G62380 47.087 206 91 5 21 217 5 201 7.22e-56 187
MS.gene58364.t1 AT3G04070 50.000 192 72 3 23 190 10 201 7.94e-56 187
MS.gene58364.t1 AT1G65910 51.832 191 81 5 23 211 6 187 7.28e-55 191
MS.gene58364.t1 AT5G08790 55.422 166 64 3 18 178 2 162 9.67e-55 182
MS.gene58364.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.09e-54 184
MS.gene58364.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.09e-54 184
MS.gene58364.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.09e-54 184
MS.gene58364.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.09e-54 184
MS.gene58364.t1 AT1G79580 56.024 166 56 5 23 181 17 172 1.09e-54 184
MS.gene58364.t1 AT3G61910 47.753 178 77 4 14 177 2 177 1.60e-54 183
MS.gene58364.t1 AT1G61110 50.562 178 77 4 11 178 4 180 2.07e-54 182
MS.gene58364.t1 AT5G66300 52.096 167 70 4 16 178 5 165 3.36e-54 181
MS.gene58364.t1 AT1G01720 47.739 199 95 3 22 218 6 197 6.31e-54 180
MS.gene58364.t1 AT4G36160 50.581 172 75 4 23 190 10 175 7.33e-54 182
MS.gene58364.t1 AT4G36160 50.581 172 75 4 23 190 10 175 7.33e-54 182
MS.gene58364.t1 AT4G36160 50.581 172 75 4 23 190 14 179 8.98e-54 182
MS.gene58364.t1 AT1G71930 51.923 156 66 3 23 175 9 158 1.25e-53 181
MS.gene58364.t1 AT1G71930 51.923 156 66 3 23 175 9 158 1.25e-53 181
MS.gene58364.t1 AT3G17730 54.839 155 64 3 23 175 6 156 1.38e-53 178
MS.gene58364.t1 AT1G69490 46.970 198 89 5 19 207 5 195 1.96e-53 178
MS.gene58364.t1 AT4G27410 52.381 168 75 3 23 190 14 176 2.06e-53 179
MS.gene58364.t1 AT5G63790 54.545 165 65 3 19 178 56 215 3.31e-53 179
MS.gene58364.t1 AT5G63790 54.545 165 65 3 19 178 46 205 3.52e-53 179
MS.gene58364.t1 AT1G77450 50.000 180 76 4 19 188 6 181 1.10e-52 176
MS.gene58364.t1 AT3G03200 57.419 155 61 3 23 175 6 157 1.17e-52 182
MS.gene58364.t1 AT3G15500 52.326 172 72 3 23 191 14 178 1.28e-52 177
MS.gene58364.t1 AT5G39820 38.828 273 134 7 11 253 5 274 1.36e-52 178
MS.gene58364.t1 AT5G04410 54.717 159 66 3 23 179 9 163 1.42e-52 184
MS.gene58364.t1 AT1G54330 59.355 155 54 3 23 175 6 153 1.63e-52 177
MS.gene58364.t1 AT3G10500 53.374 163 62 4 23 179 9 163 2.45e-52 182
MS.gene58364.t1 AT1G32770 50.581 172 70 4 18 177 11 179 2.90e-52 178
MS.gene58364.t1 AT5G46590 55.484 155 65 3 23 175 6 158 5.07e-52 175
MS.gene58364.t1 AT5G46590 60.769 130 48 2 23 150 6 134 5.85e-52 175
MS.gene58364.t1 AT1G52890 54.717 159 62 3 23 178 14 165 1.10e-51 175
MS.gene58364.t1 AT1G26870 48.851 174 82 1 12 178 5 178 2.63e-51 177
MS.gene58364.t1 AT5G17260 56.129 155 63 3 23 175 6 157 5.54e-51 177
MS.gene58364.t1 AT3G15510 52.795 161 67 3 27 178 21 181 6.42e-51 174
MS.gene58364.t1 AT3G10480 55.901 161 62 4 23 179 27 182 2.20e-50 175
MS.gene58364.t1 AT3G10490 54.088 159 68 3 23 179 27 182 5.08e-50 168
MS.gene58364.t1 AT3G10480 56.250 160 62 4 23 179 27 181 5.62e-50 174
MS.gene58364.t1 AT4G27410 47.568 185 75 4 23 190 14 193 4.46e-49 168
MS.gene58364.t1 AT4G17980 52.258 155 72 1 23 175 6 160 4.77e-49 167
MS.gene58364.t1 AT4G17980 52.258 155 72 1 23 175 6 160 5.94e-49 167
MS.gene58364.t1 AT4G35580 43.568 241 99 8 23 255 9 220 1.44e-48 172
MS.gene58364.t1 AT4G35580 43.568 241 99 8 23 255 9 220 1.45e-48 172
MS.gene58364.t1 AT4G35580 43.568 241 99 8 23 255 9 220 1.63e-48 172
MS.gene58364.t1 AT5G13180 48.466 163 78 2 18 180 9 165 2.22e-48 164
MS.gene58364.t1 AT3G10490 54.088 159 68 3 23 179 27 182 2.45e-48 170
MS.gene58364.t1 AT1G33060 60.150 133 49 2 23 153 24 154 4.51e-48 173
MS.gene58364.t1 AT1G33060 60.150 133 49 2 23 153 24 154 4.86e-48 173
MS.gene58364.t1 AT1G52880 51.875 160 69 2 27 178 21 180 1.22e-47 165
MS.gene58364.t1 AT2G02450 52.980 151 66 2 25 175 53 198 1.41e-47 166
MS.gene58364.t1 AT2G02450 52.980 151 66 2 25 175 53 198 2.06e-47 167
MS.gene58364.t1 AT5G24590 47.486 179 79 4 11 182 1 171 7.19e-47 166
MS.gene58364.t1 AT2G33480 49.398 166 77 3 17 182 9 167 4.06e-46 159
MS.gene58364.t1 AT2G33480 49.398 166 75 3 17 182 9 165 7.42e-46 158
MS.gene58364.t1 AT3G10480 46.907 194 61 4 23 179 27 215 1.01e-45 164
MS.gene58364.t1 AT2G43000 39.604 202 111 4 25 218 20 218 2.25e-45 157
MS.gene58364.t1 AT1G34180 48.734 158 73 4 25 179 18 170 3.88e-45 161
MS.gene58364.t1 AT1G32870 52.830 159 69 3 23 179 10 164 4.12e-45 163
MS.gene58364.t1 AT1G32870 52.830 159 69 3 23 179 10 164 4.76e-45 162
MS.gene58364.t1 AT3G49530 53.901 141 62 2 11 149 1 140 8.55e-45 159
MS.gene58364.t1 AT1G32870 52.830 159 69 3 23 179 46 200 1.17e-44 162
MS.gene58364.t1 AT1G34190 48.734 158 73 4 25 179 18 170 1.40e-44 162
MS.gene58364.t1 AT1G34180 48.734 158 73 4 25 179 18 170 1.51e-44 162
MS.gene58364.t1 AT3G49530 53.901 141 62 2 11 149 1 140 1.55e-44 160
MS.gene58364.t1 AT5G64060 45.625 160 79 4 23 179 6 160 1.37e-43 155
MS.gene58364.t1 AT1G34180 45.294 170 73 4 25 179 18 182 2.40e-43 157
MS.gene58364.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.87e-43 157
MS.gene58364.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.87e-43 157
MS.gene58364.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.87e-43 157
MS.gene58364.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.87e-43 157
MS.gene58364.t1 AT5G09330 45.625 160 81 3 22 179 5 160 2.87e-43 157
MS.gene58364.t1 AT1G34180 45.294 170 73 4 25 179 18 182 8.98e-43 157
MS.gene58364.t1 AT1G32510 42.079 202 89 5 23 211 6 192 2.48e-42 150
MS.gene58364.t1 AT3G12977 59.016 122 45 3 70 190 12 129 3.06e-42 147
MS.gene58364.t1 AT2G27300 52.672 131 59 2 23 152 14 142 1.29e-41 149
MS.gene58364.t1 AT2G17040 52.756 127 59 1 25 150 8 134 6.26e-41 145
MS.gene58364.t1 AT1G56010 43.939 198 74 8 72 267 2 164 6.21e-40 142
MS.gene58364.t1 AT3G12910 48.592 142 69 3 12 150 10 150 7.69e-39 141
MS.gene58364.t1 AT5G22290 38.251 183 102 3 25 206 23 195 5.00e-38 140
MS.gene58364.t1 AT4G10350 58.407 113 40 3 68 177 7 115 1.29e-36 135
MS.gene58364.t1 AT4G28530 50.000 128 48 1 23 134 10 137 2.28e-36 135
MS.gene58364.t1 AT3G44290 43.478 161 78 4 25 184 16 164 2.53e-36 132
MS.gene58364.t1 AT3G44290 43.478 161 78 4 25 184 16 164 1.34e-35 133
MS.gene58364.t1 AT5G04395 45.638 149 67 2 16 150 21 169 3.00e-35 128
MS.gene58364.t1 AT2G33480 50.467 107 49 2 76 182 8 110 7.28e-27 106
MS.gene58364.t1 AT5G64530 41.406 128 63 2 23 150 3 118 6.99e-26 102
MS.gene58364.t1 AT4G01550 38.994 159 86 5 26 180 7 158 9.39e-26 108
MS.gene58364.t1 AT5G64530 35.758 165 82 3 23 175 3 155 1.67e-25 102
MS.gene58364.t1 AT3G04420 41.860 129 69 3 24 148 4 130 2.14e-25 104
MS.gene58364.t1 AT3G04420 41.860 129 69 3 24 148 4 130 5.37e-25 104
MS.gene58364.t1 AT1G02230 38.028 142 80 4 24 160 4 142 9.97e-25 104
MS.gene58364.t1 AT4G01520 40.152 132 74 4 24 150 5 136 5.02e-24 101
MS.gene58364.t1 AT3G44350 34.568 162 99 4 22 178 4 163 8.67e-24 99.0
MS.gene58364.t1 AT5G22380 40.310 129 70 3 26 148 8 135 1.38e-23 98.6
MS.gene58364.t1 AT3G44350 38.346 133 76 3 22 149 4 135 2.02e-23 95.9
MS.gene58364.t1 AT4G01540 40.769 130 72 4 26 150 7 136 5.54e-23 100
MS.gene58364.t1 AT4G01540 40.769 130 72 4 26 150 7 136 5.77e-23 99.8
MS.gene58364.t1 AT4G01540 40.769 130 72 4 26 150 7 136 1.26e-22 99.0
MS.gene58364.t1 AT4G01540 40.769 130 72 4 26 150 7 136 1.27e-22 99.4
MS.gene58364.t1 AT1G02250 39.231 130 71 4 24 148 4 130 2.74e-22 97.4
MS.gene58364.t1 AT3G10490 55.952 84 34 2 96 179 2 82 4.10e-21 94.0
MS.gene58364.t1 AT3G10490 55.952 84 34 2 96 179 2 82 4.10e-21 94.0
MS.gene58364.t1 AT2G18060 47.312 93 37 3 101 190 2 85 1.39e-20 90.9
MS.gene58364.t1 AT1G02220 39.535 129 69 4 24 148 4 127 1.62e-20 92.8
MS.gene58364.t1 AT2G43000 33.803 142 83 4 84 217 1 139 3.99e-18 82.4
MS.gene58364.t1 AT1G01010 35.152 165 88 7 26 180 6 161 1.05e-17 84.7
MS.gene58364.t1 AT5G14000 33.537 164 96 5 18 178 10 163 4.23e-17 79.7
MS.gene58364.t1 AT5G14000 36.232 138 80 4 18 152 10 142 4.93e-16 75.5
MS.gene58364.t1 AT5G50820 34.483 145 67 6 17 150 11 138 3.53e-15 73.9
MS.gene58364.t1 AT5G22290 36.190 105 57 2 102 206 2 96 2.46e-14 72.4
MS.gene58364.t1 AT1G28470 34.054 185 92 10 8 173 61 234 6.44e-14 72.4
MS.gene58364.t1 AT3G56530 32.576 132 84 3 23 151 52 181 1.13e-13 71.6
MS.gene58364.t1 AT3G04430 34.091 132 73 5 29 148 6 135 1.40e-12 66.6
MS.gene58364.t1 AT3G01600 34.000 150 77 6 23 153 55 201 1.72e-11 65.5
MS.gene58364.t1 AT4G28500 30.481 187 100 8 23 190 59 234 9.54e-11 62.8

Find 86 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTGAGTTTGAGGCTATTT+TGG 0.142515 2.3:+19150941 None:intergenic
GAGCAACAGAAGCTGGTTAT+TGG 0.282927 2.3:-19151861 MS.gene58364:CDS
CTTTAGATCAGTGTTGTTGC+TGG 0.285167 2.3:+19150779 None:intergenic
GGTCTTAACATTGGAGGATT+AGG 0.286533 2.3:-19150432 MS.gene58364:CDS
GTGGTGATATTCTTGGTGGC+TGG 0.323001 2.3:-19150500 MS.gene58364:CDS
TGAACCAAGTTCACCTTCTT+CGG 0.335807 2.3:-19150892 MS.gene58364:CDS
AAGACTCATGCTGTTGTTGC+TGG 0.361273 2.3:+19150920 None:intergenic
TCCATTGTTGCATTCATAGA+AGG 0.370477 2.3:+19150654 None:intergenic
CAAAAGAGTAACACTGGAAA+TGG 0.388031 2.3:-19151008 MS.gene58364:CDS
TGGTGATATTCTTGGTGGCT+GGG 0.390544 2.3:-19150499 MS.gene58364:CDS
TTGAATTCATGAAGGATGAA+TGG 0.403950 2.3:-19151049 MS.gene58364:intron
TTTAACAGAGAAAGCTAAGA+TGG 0.413101 2.3:-19151950 MS.gene58364:intron
CTGTTGAAGTTGTTATGAAC+AGG 0.422669 2.3:+19150708 None:intergenic
AGGCTGCGCCGCAGCCGCCG+AGG 0.437536 2.3:+19150539 None:intergenic
GGTGATATTCTTGGTGGCTG+GGG 0.437635 2.3:-19150498 MS.gene58364:CDS
GCTGGTTATTGGAAAGCAAC+TGG 0.441483 2.3:-19151850 MS.gene58364:CDS
GGTGGTGGTGGTGATATTCT+TGG 0.450540 2.3:-19150507 MS.gene58364:CDS
GTGGTGGTTGACAGTGGTGG+TGG 0.451556 2.3:-19150453 MS.gene58364:CDS
GGATGCCGGCGGAGGAGCAA+AGG 0.452173 2.3:-19150476 MS.gene58364:CDS
GAAGAAGGTGAACTTGGTTC+AGG 0.456980 2.3:+19150894 None:intergenic
TGTAGATGTTGTGGAGAAAC+AGG 0.459674 2.3:+19150746 None:intergenic
TGAATTCATGAAGGATGAAT+GGG 0.460212 2.3:-19151048 MS.gene58364:intron
GGCGGAGGAGCAAAGGGTGG+TGG 0.469260 2.3:-19150469 MS.gene58364:CDS
GCTAGGTTTCAGAGGAATGT+TGG 0.470321 2.3:-19150624 MS.gene58364:CDS
TACTGTTGTTGTTCATGTGA+TGG 0.472131 2.3:+19152209 None:intergenic
TGTTCATGTGATGGTGGTGA+TGG 0.472632 2.3:+19152218 None:intergenic
CTAAGATGGGTGAGAAAGAA+TGG 0.473003 2.3:-19151936 MS.gene58364:CDS
GTTGTTGCTGGCTGAGTTTG+AGG 0.477482 2.3:+19150932 None:intergenic
CCACCACCACCACCGGGAAA+AGG 0.477721 2.3:+19150519 None:intergenic
GTGATGAGTTCTTCATCTGT+TGG 0.479915 2.3:+19152142 None:intergenic
TGATGAGTTCTTCATCTGTT+GGG 0.481156 2.3:+19152143 None:intergenic
GATGCCGGCGGAGGAGCAAA+GGG 0.483796 2.3:-19150475 MS.gene58364:CDS
CTCTACCTCTATAGAAAACA+AGG 0.487385 2.3:+19151770 None:intergenic
TTCCTCTGAAACCTAGCAAA+AGG 0.489285 2.3:+19150630 None:intergenic
ACCACTTGTGGTGGCTGTCA+CGG 0.492729 2.3:+19150977 None:intergenic
CAGCAACAACACTGATCTAA+AGG 0.495202 2.3:-19150778 MS.gene58364:CDS
ATGCATGAATACCGTCTTGA+AGG 0.495598 2.3:-19151718 MS.gene58364:CDS
GCGGTGCTAGCTGCGGTGTA+AGG 0.495882 2.3:+19150840 None:intergenic
CGTGACAGAAAGTATCCAAC+TGG 0.496401 2.3:-19151898 MS.gene58364:CDS
CTTCTGAGCTTGACTGCATG+TGG 0.509536 2.3:-19150407 MS.gene58364:CDS
GTGATATTCTTGGTGGCTGG+GGG 0.509670 2.3:-19150497 MS.gene58364:CDS
GGAGATGAATCAAGAAGAGG+TGG 0.516437 2.3:+19150861 None:intergenic
ACAAATAGAGCAACAGAAGC+TGG 0.519833 2.3:-19151868 MS.gene58364:CDS
TAAACCGAAGAAGGTGAACT+TGG 0.530916 2.3:+19150888 None:intergenic
GTTGAGATCAACTTCAGCTA+TGG 0.539738 2.3:+19152072 None:intergenic
ACCACCCTTTGCTCCTCCGC+CGG 0.540834 2.3:+19150471 None:intergenic
GGTGGTGGTCTTAACATTGG+AGG 0.544599 2.3:-19150438 MS.gene58364:CDS
GGTGGTGGTGATATTCTTGG+TGG 0.546301 2.3:-19150504 MS.gene58364:CDS
GCTAGCACCGCCACATTCAA+CGG 0.550143 2.3:-19150828 MS.gene58364:CDS
ATTTGATGTTGTAGATGTTG+TGG 0.550821 2.3:+19150737 None:intergenic
GGTGGAAGGTAAACCGAAGA+AGG 0.552129 2.3:+19150879 None:intergenic
TCTTGTAGTGACCTCAAGCT+AGG 0.554276 2.3:+19150588 None:intergenic
TAGTTACCAGGTAGCTCCCA+TGG 0.554498 2.3:+19152040 None:intergenic
ACCTTCTATGAATGCAACAA+TGG 0.562153 2.3:-19150655 MS.gene58364:CDS
CTATTTGTACGCAAACCAGT+TGG 0.564828 2.3:+19151883 None:intergenic
TATGGCTCTTGCAGTGAAAG+TGG 0.573657 2.3:+19152090 None:intergenic
CATTTGACCACCGTTGAATG+TGG 0.575010 2.3:+19150818 None:intergenic
TGTGAACCATGGGAGCTACC+TGG 0.581438 2.3:-19152046 MS.gene58364:intron
TGTTGTTGTTCATGTGATGG+TGG 0.584890 2.3:+19152212 None:intergenic
TAAGGAGATGAATCAAGAAG+AGG 0.594247 2.3:+19150858 None:intergenic
TTAACAGAGAAAGCTAAGAT+GGG 0.599881 2.3:-19151949 MS.gene58364:intron
AGTGATGCACATTTACCACC+TGG 0.600350 2.3:-19152178 MS.gene58364:CDS
TCTCAACAAGTGTGAACCAT+GGG 0.603575 2.3:-19152056 MS.gene58364:CDS
ATGAATCAAGAAGAGGTGGA+AGG 0.605273 2.3:+19150865 None:intergenic
AGGGTGGTGGTTGACAGTGG+TGG 0.606408 2.3:-19150456 MS.gene58364:CDS
CAAAGGGTGGTGGTTGACAG+TGG 0.611515 2.3:-19150459 MS.gene58364:CDS
GTGTTTCAAAAGAGTAACAC+TGG 0.613580 2.3:-19151014 MS.gene58364:CDS
ACCGTGACAGCCACCACAAG+TGG 0.620040 2.3:-19150978 MS.gene58364:CDS
GCCGGCGGAGGAGCAAAGGG+TGG 0.622038 2.3:-19150472 MS.gene58364:CDS
GTTGGGTGGAAACGAAAACC+AGG 0.623151 2.3:+19152160 None:intergenic
AAGCAAATTTGCCTTCAAGA+CGG 0.624374 2.3:+19151707 None:intergenic
AACTTCAACAGCAACAACAA+TGG 0.624816 2.3:-19150696 MS.gene58364:CDS
GTACCTTGGAGTTTCTAGAG+AGG 0.626435 2.3:+19151677 None:intergenic
TATAGAGGTAGAGCTCCTAA+AGG 0.627496 2.3:-19151760 MS.gene58364:CDS
CTTCCTCTCTAGAAACTCCA+AGG 0.629367 2.3:-19151680 MS.gene58364:intron
TGAGTTCTTCATCTGTTGGG+TGG 0.631374 2.3:+19152146 None:intergenic
ACTTGTGGTGGCTGTCACGG+TGG 0.643257 2.3:+19150980 None:intergenic
AGTGGTGGTGGTCTTAACAT+TGG 0.644378 2.3:-19150441 MS.gene58364:CDS
ATCTCAACAAGTGTGAACCA+TGG 0.644661 2.3:-19152057 MS.gene58364:CDS
GTGACAGCCACCACAAGTGG+TGG 0.646314 2.3:-19150975 MS.gene58364:CDS
GAATGTGGCGGTGCTAGCTG+CGG 0.660317 2.3:+19150833 None:intergenic
TTGACCACCGTTGAATGTGG+CGG 0.686693 2.3:+19150821 None:intergenic
TGTTGAAGTTGTTATGAACA+GGG 0.693459 2.3:+19150709 None:intergenic
TCTACCTCTATAGAAAACAA+GGG 0.693978 2.3:+19151771 None:intergenic
AGCACCGCCACATTCAACGG+TGG 0.735822 2.3:-19150825 MS.gene58364:CDS
GGGTGGAAACGAAAACCAGG+TGG 0.775610 2.3:+19152163 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAAAAATTAATGTGAA+TGG + chr2.3:19151358-19151377 None:intergenic 15.0%
!! AAAATTAATGTGAATGGTTA+TGG + chr2.3:19151352-19151371 None:intergenic 20.0%
!!! ATGTATTTTTGAATTCATGA+AGG - chr2.3:19151573-19151592 MS.gene58364:intron 20.0%
! GTACAAAACACTTGAAATTA+AGG + chr2.3:19151046-19151065 None:intergenic 25.0%
! TAAAGGTGAAAAAAGTAACT+GGG - chr2.3:19150887-19150906 MS.gene58364:CDS 25.0%
!! AACTTTTCTAACACTTTGTT+TGG - chr2.3:19150653-19150672 MS.gene58364:CDS 25.0%
!! CTGTTTATAAAGTGAGATTT+TGG + chr2.3:19151494-19151513 None:intergenic 25.0%
AATGCATATAGAAGCCTATT+AGG + chr2.3:19151146-19151165 None:intergenic 30.0%
ATTTGATGTTGTAGATGTTG+TGG + chr2.3:19151896-19151915 None:intergenic 30.0%
CAAAATGAAACTGGTGAAAA+TGG + chr2.3:19151422-19151441 None:intergenic 30.0%
CTAAAGGTGAAAAAAGTAAC+TGG - chr2.3:19150886-19150905 MS.gene58364:CDS 30.0%
TAATAGGCTTCTATATGCAT+TGG - chr2.3:19151145-19151164 MS.gene58364:intron 30.0%
TCAAAAACTTACTCTCTTGT+TGG - chr2.3:19150825-19150844 MS.gene58364:CDS 30.0%
TCTACCTCTATAGAAAACAA+GGG + chr2.3:19150862-19150881 None:intergenic 30.0%
TGAATTCATGAAGGATGAAT+GGG - chr2.3:19151582-19151601 MS.gene58364:intron 30.0%
TGACAGAAAAATTAGTACCT+TGG + chr2.3:19150970-19150989 None:intergenic 30.0%
TGTTAATGGTTATTACCCTA+TGG - chr2.3:19151272-19151291 MS.gene58364:intron 30.0%
TGTTGAAGTTGTTATGAACA+GGG + chr2.3:19151924-19151943 None:intergenic 30.0%
TTAACAGAGAAAGCTAAGAT+GGG - chr2.3:19150681-19150700 MS.gene58364:CDS 30.0%
TTGAATTCATGAAGGATGAA+TGG - chr2.3:19151581-19151600 MS.gene58364:intron 30.0%
TTTAACAGAGAAAGCTAAGA+TGG - chr2.3:19150680-19150699 MS.gene58364:CDS 30.0%
TTTCAAAAGACTAGAGAGAT+AGG - chr2.3:19151105-19151124 MS.gene58364:intron 30.0%
! TTGATGATAAGTTAGTTACC+AGG + chr2.3:19150605-19150624 None:intergenic 30.0%
!! CTTTTGAAAGGATCAAAATG+CGG + chr2.3:19151094-19151113 None:intergenic 30.0%
!! GTTGATGATTTATCTCGATT+AGG - chr2.3:19151182-19151201 MS.gene58364:intron 30.0%
!! TATCTCTCTAGTCTTTTGAA+AGG + chr2.3:19151106-19151125 None:intergenic 30.0%
!! TTTGGTAGAAAAAGCATTGT+TGG + chr2.3:19151476-19151495 None:intergenic 30.0%
!!! AAAACCCTTGTTTTCTATAG+AGG - chr2.3:19150855-19150874 MS.gene58364:CDS 30.0%
!!! CAGTTACTTTTTTCACCTTT+AGG + chr2.3:19150888-19150907 None:intergenic 30.0%
!!! GGAATCTTGTTTTTCCTAAT+AGG - chr2.3:19151129-19151148 MS.gene58364:intron 30.0%
!!! TGTCAAGAACTTTTTTGAGA+AGG + chr2.3:19150520-19150539 None:intergenic 30.0%
AAACTCTTACATGCACCATA+GGG + chr2.3:19151290-19151309 None:intergenic 35.0%
AACCCTATGCAAAATGAAAC+TGG + chr2.3:19151431-19151450 None:intergenic 35.0%
AACTTCAACAGCAACAACAA+TGG - chr2.3:19151934-19151953 MS.gene58364:CDS 35.0%
AAGCAAATTTGCCTTCAAGA+CGG + chr2.3:19150926-19150945 None:intergenic 35.0%
ACCTTCTATGAATGCAACAA+TGG - chr2.3:19151975-19151994 MS.gene58364:intron 35.0%
ACGCATCGTTTACATGTTAA+TGG - chr2.3:19151258-19151277 MS.gene58364:intron 35.0%
CAAAAGAGTAACACTGGAAA+TGG - chr2.3:19151622-19151641 MS.gene58364:intron 35.0%
CTCTACCTCTATAGAAAACA+AGG + chr2.3:19150863-19150882 None:intergenic 35.0%
CTGTTGAAGTTGTTATGAAC+AGG + chr2.3:19151925-19151944 None:intergenic 35.0%
GTGAATACATGAGTTTGCAT+GGG - chr2.3:19151324-19151343 MS.gene58364:intron 35.0%
GTGTTTCAAAAGAGTAACAC+TGG - chr2.3:19151616-19151635 MS.gene58364:intron 35.0%
TAAGGAGATGAATCAAGAAG+AGG + chr2.3:19151775-19151794 None:intergenic 35.0%
TCCATTGTTGCATTCATAGA+AGG + chr2.3:19151979-19151998 None:intergenic 35.0%
TGATGAGTTCTTCATCTGTT+GGG + chr2.3:19150490-19150509 None:intergenic 35.0%
TGTGAATACATGAGTTTGCA+TGG - chr2.3:19151323-19151342 MS.gene58364:intron 35.0%
! CACCAGTTTCATTTTGCATA+GGG - chr2.3:19151426-19151445 MS.gene58364:intron 35.0%
! TACTGTTGTTGTTCATGTGA+TGG + chr2.3:19150424-19150443 None:intergenic 35.0%
! TCACCAGTTTCATTTTGCAT+AGG - chr2.3:19151425-19151444 MS.gene58364:intron 35.0%
ACAAATAGAGCAACAGAAGC+TGG - chr2.3:19150762-19150781 MS.gene58364:CDS 40.0%
ATCTCAACAAGTGTGAACCA+TGG - chr2.3:19150573-19150592 MS.gene58364:CDS 40.0%
ATGAATCAAGAAGAGGTGGA+AGG + chr2.3:19151768-19151787 None:intergenic 40.0%
ATGCATGAATACCGTCTTGA+AGG - chr2.3:19150912-19150931 MS.gene58364:CDS 40.0%
CAAAAGACTAGAGAGATAGG+TGG - chr2.3:19151108-19151127 MS.gene58364:intron 40.0%
CAGCAACAACACTGATCTAA+AGG - chr2.3:19151852-19151871 MS.gene58364:CDS 40.0%
CTAAGATGGGTGAGAAAGAA+TGG - chr2.3:19150694-19150713 MS.gene58364:CDS 40.0%
CTATTTGTACGCAAACCAGT+TGG + chr2.3:19150750-19150769 None:intergenic 40.0%
GAAACTCTTACATGCACCAT+AGG + chr2.3:19151291-19151310 None:intergenic 40.0%
GGTCTTAACATTGGAGGATT+AGG - chr2.3:19152198-19152217 MS.gene58364:CDS 40.0%
GTGATGAGTTCTTCATCTGT+TGG + chr2.3:19150491-19150510 None:intergenic 40.0%
GTTGAGATCAACTTCAGCTA+TGG + chr2.3:19150561-19150580 None:intergenic 40.0%
TAAACCGAAGAAGGTGAACT+TGG + chr2.3:19151745-19151764 None:intergenic 40.0%
TATAGAGGTAGAGCTCCTAA+AGG - chr2.3:19150870-19150889 MS.gene58364:CDS 40.0%
TCTCAACAAGTGTGAACCAT+GGG - chr2.3:19150574-19150593 MS.gene58364:CDS 40.0%
TGAACCAAGTTCACCTTCTT+CGG - chr2.3:19151738-19151757 MS.gene58364:CDS 40.0%
TGTAGATGTTGTGGAGAAAC+AGG + chr2.3:19151887-19151906 None:intergenic 40.0%
! ATCCTTTTGCTAGGTTTCAG+AGG - chr2.3:19151998-19152017 MS.gene58364:intron 40.0%
! CAACAATGGATCCTTTTGCT+AGG - chr2.3:19151989-19152008 MS.gene58364:intron 40.0%
! CTTTAGATCAGTGTTGTTGC+TGG + chr2.3:19151854-19151873 None:intergenic 40.0%
! GCTTCCTTTCTTTTTCTCCT+CGG - chr2.3:19152074-19152093 MS.gene58364:CDS 40.0%
! TGTTGTTGTTCATGTGATGG+TGG + chr2.3:19150421-19150440 None:intergenic 40.0%
!! TTCCTCTGAAACCTAGCAAA+AGG + chr2.3:19152003-19152022 None:intergenic 40.0%
!! TTTCTGCTTTTCCTAGCTTG+AGG - chr2.3:19152031-19152050 MS.gene58364:intron 40.0%
AAGACTCATGCTGTTGTTGC+TGG + chr2.3:19151713-19151732 None:intergenic 45.0%
AGTGATGCACATTTACCACC+TGG - chr2.3:19150452-19150471 MS.gene58364:CDS 45.0%
CATTTGACCACCGTTGAATG+TGG + chr2.3:19151815-19151834 None:intergenic 45.0%
GAAGAAGGTGAACTTGGTTC+AGG + chr2.3:19151739-19151758 None:intergenic 45.0%
GAGCAACAGAAGCTGGTTAT+TGG - chr2.3:19150769-19150788 MS.gene58364:CDS 45.0%
GCTAGGTTTCAGAGGAATGT+TGG - chr2.3:19152006-19152025 MS.gene58364:intron 45.0%
GCTGGTTATTGGAAAGCAAC+TGG - chr2.3:19150780-19150799 MS.gene58364:CDS 45.0%
GGAGATGAATCAAGAAGAGG+TGG + chr2.3:19151772-19151791 None:intergenic 45.0%
TATGGCTCTTGCAGTGAAAG+TGG + chr2.3:19150543-19150562 None:intergenic 45.0%
TCTTGTAGTGACCTCAAGCT+AGG + chr2.3:19152045-19152064 None:intergenic 45.0%
TGAGTTCTTCATCTGTTGGG+TGG + chr2.3:19150487-19150506 None:intergenic 45.0%
! CTTCCTCTCTAGAAACTCCA+AGG - chr2.3:19150950-19150969 MS.gene58364:CDS 45.0%
! GTACCTTGGAGTTTCTAGAG+AGG + chr2.3:19150956-19150975 None:intergenic 45.0%
! TCCTTTCTTTTTCTCCTCGG+CGG - chr2.3:19152077-19152096 MS.gene58364:CDS 45.0%
! TGGTGATATTCTTGGTGGCT+GGG - chr2.3:19152131-19152150 MS.gene58364:CDS 45.0%
!! AGTGGTGGTGGTCTTAACAT+TGG - chr2.3:19152189-19152208 MS.gene58364:CDS 45.0%
!! CGTGACAGAAAGTATCCAAC+TGG - chr2.3:19150732-19150751 MS.gene58364:CDS 45.0%
!! GGCTGAGTTTGAGGCTATTT+TGG + chr2.3:19151692-19151711 None:intergenic 45.0%
!! TGTTCATGTGATGGTGGTGA+TGG + chr2.3:19150415-19150434 None:intergenic 45.0%
!!! CTTTTTTGCACCACCACTTG+TGG + chr2.3:19151668-19151687 None:intergenic 45.0%
AATATCACCACCACCACCAC+CGG + chr2.3:19152121-19152140 None:intergenic 50.0%
CTTCTGAGCTTGACTGCATG+TGG - chr2.3:19152223-19152242 MS.gene58364:CDS 50.0%
GGTGGAAGGTAAACCGAAGA+AGG + chr2.3:19151754-19151773 None:intergenic 50.0%
GTTGGGTGGAAACGAAAACC+AGG + chr2.3:19150473-19150492 None:intergenic 50.0%
TAGTTACCAGGTAGCTCCCA+TGG + chr2.3:19150593-19150612 None:intergenic 50.0%
TTGACCACCGTTGAATGTGG+CGG + chr2.3:19151812-19151831 None:intergenic 50.0%
! GGTGATATTCTTGGTGGCTG+GGG - chr2.3:19152132-19152151 MS.gene58364:CDS 50.0%
! GGTGGTGGTCTTAACATTGG+AGG - chr2.3:19152192-19152211 MS.gene58364:CDS 50.0%
! GGTGGTGGTGATATTCTTGG+TGG - chr2.3:19152126-19152145 MS.gene58364:CDS 50.0%
! GTGATATTCTTGGTGGCTGG+GGG - chr2.3:19152133-19152152 MS.gene58364:CDS 50.0%
! GTGGTGATATTCTTGGTGGC+TGG - chr2.3:19152130-19152149 MS.gene58364:CDS 50.0%
! GTTGTTGCTGGCTGAGTTTG+AGG + chr2.3:19151701-19151720 None:intergenic 50.0%
! TTTTGCACCACCACTTGTGG+TGG + chr2.3:19151665-19151684 None:intergenic 50.0%
!! GGTGGTGGTGGTGATATTCT+TGG - chr2.3:19152123-19152142 MS.gene58364:CDS 50.0%
ACCACTTGTGGTGGCTGTCA+CGG + chr2.3:19151656-19151675 None:intergenic 55.0%
ATATCACCACCACCACCACC+GGG + chr2.3:19152120-19152139 None:intergenic 55.0%
GCCGCCGAGGAGAAAAAGAA+AGG + chr2.3:19152081-19152100 None:intergenic 55.0%
GCTAGCACCGCCACATTCAA+CGG - chr2.3:19151802-19151821 MS.gene58364:CDS 55.0%
GGGTGGAAACGAAAACCAGG+TGG + chr2.3:19150470-19150489 None:intergenic 55.0%
TGTGAACCATGGGAGCTACC+TGG - chr2.3:19150584-19150603 MS.gene58364:CDS 55.0%
! CAAAGGGTGGTGGTTGACAG+TGG - chr2.3:19152171-19152190 MS.gene58364:CDS 55.0%
ACCGTGACAGCCACCACAAG+TGG - chr2.3:19151652-19151671 MS.gene58364:intron 60.0%
ACTTGTGGTGGCTGTCACGG+TGG + chr2.3:19151653-19151672 None:intergenic 60.0%
AGCACCGCCACATTCAACGG+TGG - chr2.3:19151805-19151824 MS.gene58364:CDS 60.0%
GTGACAGCCACCACAAGTGG+TGG - chr2.3:19151655-19151674 MS.gene58364:intron 60.0%
GTGGTGGTTGACAGTGGTGG+TGG - chr2.3:19152177-19152196 MS.gene58364:CDS 60.0%
! AGGGTGGTGGTTGACAGTGG+TGG - chr2.3:19152174-19152193 MS.gene58364:CDS 60.0%
! CTTTTTCTCCTCGGCGGCTG+CGG - chr2.3:19152083-19152102 MS.gene58364:CDS 60.0%
! GAATGTGGCGGTGCTAGCTG+CGG + chr2.3:19151800-19151819 None:intergenic 60.0%
ACCACCCTTTGCTCCTCCGC+CGG + chr2.3:19152162-19152181 None:intergenic 65.0%
CCACCACCACCACCGGGAAA+AGG + chr2.3:19152114-19152133 None:intergenic 65.0%
GATGCCGGCGGAGGAGCAAA+GGG - chr2.3:19152155-19152174 MS.gene58364:CDS 65.0%
! GCGGTGCTAGCTGCGGTGTA+AGG + chr2.3:19151793-19151812 None:intergenic 65.0%
! TCTTGGTGGCTGGGGGATGC+CGG - chr2.3:19152140-19152159 MS.gene58364:CDS 65.0%
!! CAGCCTTTTCCCGGTGGTGG+TGG - chr2.3:19152108-19152127 MS.gene58364:CDS 65.0%
!!! CCTTTTCCCGGTGGTGGTGG+TGG - chr2.3:19152111-19152130 MS.gene58364:CDS 65.0%
GGATGCCGGCGGAGGAGCAA+AGG - chr2.3:19152154-19152173 MS.gene58364:CDS 70.0%
GGCGGAGGAGCAAAGGGTGG+TGG - chr2.3:19152161-19152180 MS.gene58364:CDS 70.0%
! GCGCAGCCTTTTCCCGGTGG+TGG - chr2.3:19152105-19152124 MS.gene58364:CDS 70.0%
! GCTGCGGCGCAGCCTTTTCC+CGG - chr2.3:19152099-19152118 MS.gene58364:CDS 70.0%
GCCGGCGGAGGAGCAAAGGG+TGG - chr2.3:19152158-19152177 MS.gene58364:CDS 75.0%
TGGTGGCTGGGGGATGCCGG+CGG - chr2.3:19152143-19152162 MS.gene58364:CDS 75.0%
! GCGGCGCAGCCTTTTCCCGG+TGG - chr2.3:19152102-19152121 MS.gene58364:CDS 75.0%
! TGGCTGGGGGATGCCGGCGG+AGG - chr2.3:19152146-19152165 MS.gene58364:CDS 80.0%
! AGGCTGCGCCGCAGCCGCCG+AGG + chr2.3:19152094-19152113 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 19150398 19152254 19150398 ID=MS.gene58364
chr2.3 mRNA 19150398 19152254 19150398 ID=MS.gene58364.t1;Parent=MS.gene58364
chr2.3 exon 19152047 19152254 19152047 ID=MS.gene58364.t1.exon1;Parent=MS.gene58364.t1
chr2.3 CDS 19152047 19152254 19152047 ID=cds.MS.gene58364.t1;Parent=MS.gene58364.t1
chr2.3 exon 19151681 19151964 19151681 ID=MS.gene58364.t1.exon2;Parent=MS.gene58364.t1
chr2.3 CDS 19151681 19151964 19151681 ID=cds.MS.gene58364.t1;Parent=MS.gene58364.t1
chr2.3 exon 19150398 19151057 19150398 ID=MS.gene58364.t1.exon3;Parent=MS.gene58364.t1
chr2.3 CDS 19150398 19151057 19150398 ID=cds.MS.gene58364.t1;Parent=MS.gene58364.t1
Gene Sequence

>MS.gene58364

ATGGAAAGCTTCTTCCATCACCACCATCACATGAACAACAACAGTAATAACAACAGTGATGCACATTTACCACCTGGTTTTCGTTTCCACCCAACAGATGAAGAACTCATCACATTCTACCTTCTCAAAAAAGTTCTTGACACCACTTTCACTGCAAGAGCCATAGCTGAAGTTGATCTCAACAAGTGTGAACCATGGGAGCTACCTGGTAACTAACTTATCATCAATTATTCAACAAACTCTTTTTATAAAGTTAACTTTTCTAACACTTTGTTTGGTTATTTTAACAGAGAAAGCTAAGATGGGTGAGAAAGAATGGTACTTCTTCAGTCTACGTGACAGAAAGTATCCAACTGGTTTGCGTACAAATAGAGCAACAGAAGCTGGTTATTGGAAAGCAACTGGAAAAGATAGAGAGATTTATAGCTCAAAAACTTACTCTCTTGTTGGTATGAAGAAAACCCTTGTTTTCTATAGAGGTAGAGCTCCTAAAGGTGAAAAAAGTAACTGGGTTATGCATGAATACCGTCTTGAAGGCAAATTTGCTTATCACTTCCTCTCTAGAAACTCCAAGGTACTAATTTTTCTGTCATTTCTTCATCATAGCTATTTTAATTTAGTGAAGAAATTTTTTTTTTTGTTACTCCTTAATTTCAAGTGTTTTGTACTTTGTTGTAATTGTTTGTATATGAGCCGCATTTTGATCCTTTCAAAAGACTAGAGAGATAGGTGGAATCTTGTTTTTCCTAATAGGCTTCTATATGCATTGGTTTCATTTATCAATGTTGATGATTTATCTCGATTAGGATTTGTTGTACTTTTTGAGATGAATGATTACTGCAGAGAATTAATCAATCTTGACGCATCGTTTACATGTTAATGGTTATTACCCTATGGTGCATGTAAGAGTTTCTTATCACACTTTTGTGAATACATGAGTTTGCATGGGAACCATAACCATTCACATTAATTTTTCAAAACTGTATTTTGCTTAAGAGTAGTATATGTACGTATATCACTGCCATTTTCACCAGTTTCATTTTGCATAGGGTTTATCATCAATCATCATTAACTACCAACAATGCTTTTTCTACCAAAATCTCACTTTATAAACAGTTACATAATAAGTTAATAACATGCTTTTGAATTTTGTTTTTATTATAACTAATTCTTACATGTATTTTTGAATTCATGAAGGATGAATGGGTCATTTCACGTGTGTTTCAAAAGAGTAACACTGGAAATGGAAGCACCACCGTGACAGCCACCACAAGTGGTGGTGCAAAAAAGACCAAAATAGCCTCAAACTCAGCCAGCAACAACAGCATGAGTCTTTGTCCTGAACCAAGTTCACCTTCTTCGGTTTACCTTCCACCTCTTCTTGATTCATCTCCTTACACCGCAGCTAGCACCGCCACATTCAACGGTGGTCAAATGTGTAACTACAACAGCTCCAGCAACAACACTGATCTAAAGGAGCACGTGTCCTGTTTCTCCACAACATCTACAACATCAAATGTTGTCCCTGTTCATAACAACTTCAACAGCAACAACAATGGAAGCTTTGATCTTATTTCACCTTCTATGAATGCAACAATGGATCCTTTTGCTAGGTTTCAGAGGAATGTTGGTGTTTCTGCTTTTCCTAGCTTGAGGTCACTACAAGATAATCTTCAGCTTCCTTTCTTTTTCTCCTCGGCGGCTGCGGCGCAGCCTTTTCCCGGTGGTGGTGGTGGTGATATTCTTGGTGGCTGGGGGATGCCGGCGGAGGAGCAAAGGGTGGTGGTTGACAGTGGTGGTGGTCTTAACATTGGAGGATTAGGTTCTTCTGAGCTTGACTGCATGTGGAACTATTAA
Protein sequence

>MS.gene58364.t1

MESFFHHHHHMNNNSNNNSDAHLPPGFRFHPTDEELITFYLLKKVLDTTFTARAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTYSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHFLSRNSKDEWVISRVFQKSNTGNGSTTVTATTSGGAKKTKIASNSASNNSMSLCPEPSSPSSVYLPPLLDSSPYTAASTATFNGGQMCNYNSSSNNTDLKEHVSCFSTTSTTSNVVPVHNNFNSNNNGSFDLISPSMNATMDPFARFQRNVGVSAFPSLRSLQDNLQLPFFFSSAAAAQPFPGGGGGDILGGWGMPAEEQRVVVDSGGGLNIGGLGSSELDCMWNY