Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58663.t1 | XP_003594872.2 | 97.9 | 423 | 9 | 0 | 2 | 424 | 58 | 480 | 6.90E-241 | 842.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58663.t1 | Q84JF5 | 73.3 | 423 | 112 | 1 | 2 | 424 | 62 | 483 | 2.2e-187 | 656.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58663.t1 | G7INE0 | 97.9 | 423 | 9 | 0 | 2 | 424 | 58 | 480 | 5.0e-241 | 842.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene58663.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049627 | MS.gene58663 | 0.800341 | 1.51E-48 | -1.69E-46 |
| MS.gene050163 | MS.gene58663 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene58663 | 0.80224 | 6.16E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene58663 | 0.823031 | 1.72E-53 | -1.69E-46 |
| MS.gene054803 | MS.gene58663 | 0.820476 | 6.72E-53 | -1.69E-46 |
| MS.gene054804 | MS.gene58663 | 0.822627 | 2.14E-53 | -1.69E-46 |
| MS.gene061171 | MS.gene58663 | 0.802341 | 5.87E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene58663 | 0.810705 | 1.01E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58663.t1 | MTR_2g035660 | 97.872 | 423 | 9 | 0 | 2 | 424 | 58 | 480 | 0.0 | 864 |
| MS.gene58663.t1 | MTR_4g082305 | 24.883 | 426 | 244 | 18 | 39 | 423 | 80 | 470 | 7.13e-15 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58663.t1 | AT4G20130 | 74.334 | 413 | 105 | 1 | 12 | 424 | 72 | 483 | 0.0 | 666 |
| MS.gene58663.t1 | AT4G20130 | 73.425 | 365 | 96 | 1 | 60 | 424 | 1 | 364 | 0.0 | 580 |
| MS.gene58663.t1 | AT4G20130 | 73.425 | 365 | 96 | 1 | 60 | 424 | 1 | 364 | 0.0 | 580 |
Find 86 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAATTACCTAACAGTTTC+TGG | 0.135526 | 2.3:+53630417 | None:intergenic |
| CCATGGTAATTTCTTGCTTA+TGG | 0.197935 | 2.3:+53633781 | None:intergenic |
| GAAGCTGTTTCATCATCTTT+AGG | 0.257907 | 2.3:+53634711 | None:intergenic |
| TTGTCAGTCTTCAACATATC+TGG | 0.279113 | 2.3:-53630749 | MS.gene58663:CDS |
| GTATATCTAGGAGGAACTTT+TGG | 0.297229 | 2.3:-53633252 | MS.gene58663:intron |
| CAGTTTCTGGTCTTGCTTAG+AGG | 0.304127 | 2.3:+53630430 | None:intergenic |
| GTCCGAAGTATGCGAGCTTA+TGG | 0.311545 | 2.3:-53634011 | MS.gene58663:CDS |
| AAGGAAGGGCCAAATGGTTT+TGG | 0.316532 | 2.3:-53633978 | MS.gene58663:CDS |
| AACAACGAGCGTTAGAATTC+TGG | 0.322289 | 2.3:-53633187 | MS.gene58663:CDS |
| TGACCAAGGGGAATTATATC+AGG | 0.327820 | 2.3:+53633749 | None:intergenic |
| TTCAAGAGTTCTCGTAGCTT+CGG | 0.331867 | 2.3:+53629903 | None:intergenic |
| TTCCTTTCTTCACTTGGGAT+TGG | 0.339331 | 2.3:+53630509 | None:intergenic |
| TGAACTTGGGCAGGTTATAA+TGG | 0.358603 | 2.3:-53633828 | MS.gene58663:intron |
| GCAGCCTTCCTTTCTTCACT+TGG | 0.361561 | 2.3:+53630503 | None:intergenic |
| CTTTCTTCACTTGGGATTGG+AGG | 0.363171 | 2.3:+53630512 | None:intergenic |
| TAGAATTCTGGGAGAAGAAC+TGG | 0.366779 | 2.3:-53633175 | MS.gene58663:CDS |
| TTGACTGCAAAGACAACTTT+TGG | 0.380436 | 2.3:-53633462 | MS.gene58663:CDS |
| AATCTTTGTGGCAGACAGAT+TGG | 0.384792 | 2.3:-53633519 | MS.gene58663:intron |
| AGGCAATGCACGAATCCATT+TGG | 0.393759 | 2.3:-53630780 | MS.gene58663:CDS |
| ACTTAAATATGCAGAATCCT+TGG | 0.397663 | 2.3:-53630820 | MS.gene58663:intron |
| AATCCTATCTTGTAGAAATC+AGG | 0.398262 | 2.3:+53634035 | None:intergenic |
| GATCCTGATTTCTACAAGAT+AGG | 0.398743 | 2.3:-53634038 | MS.gene58663:CDS |
| CCGTTACGATAATACTCTTC+AGG | 0.400533 | 2.3:+53630722 | None:intergenic |
| CAGAAAATTGCTAATGGAAA+AGG | 0.406976 | 2.3:-53629713 | MS.gene58663:CDS |
| AAGCAAGACCAGAAACTGTT+AGG | 0.413582 | 2.3:-53630425 | MS.gene58663:intron |
| ATCTTTGTGGCAGACAGATT+GGG | 0.429709 | 2.3:-53633518 | MS.gene58663:intron |
| GAGTTGATAATATCAAATAT+TGG | 0.430427 | 2.3:+53633725 | None:intergenic |
| CTTAAATATGCAGAATCCTT+GGG | 0.431199 | 2.3:-53630819 | MS.gene58663:intron |
| TCAAGAGTTCTCGTAGCTTC+GGG | 0.432228 | 2.3:+53629904 | None:intergenic |
| ATTGCACAGAAAATTGCTAA+TGG | 0.432867 | 2.3:-53629719 | MS.gene58663:CDS |
| CTTGAGGTTCTTATAAATGC+TGG | 0.434356 | 2.3:-53632677 | MS.gene58663:CDS |
| CAGCCTTCCTTTCTTCACTT+GGG | 0.444382 | 2.3:+53630504 | None:intergenic |
| GCTAGTACTTTCATCTGCAC+TGG | 0.452982 | 2.3:+53633417 | None:intergenic |
| TTCCCTGATATAATTCCCCT+TGG | 0.459258 | 2.3:-53633752 | MS.gene58663:CDS |
| TTGTAGAAATCAGGATCTAC+AGG | 0.465598 | 2.3:+53634044 | None:intergenic |
| CTCCATAAGCTCGCATACTT+CGG | 0.475886 | 2.3:+53634009 | None:intergenic |
| ACTGCCCACATGAACCTTTG+AGG | 0.479039 | 2.3:+53633016 | None:intergenic |
| ACAACGAGCGTTAGAATTCT+GGG | 0.481989 | 2.3:-53633186 | MS.gene58663:CDS |
| GAACAAAGCTTACCAGCATA+AGG | 0.490671 | 2.3:+53632917 | None:intergenic |
| AACAATTTGGCTCAAACGAA+TGG | 0.492685 | 2.3:+53632729 | None:intergenic |
| CTGACAAGAAAGAATCCAAA+TGG | 0.492742 | 2.3:+53630765 | None:intergenic |
| GCATATACACCAAAACCATT+TGG | 0.494211 | 2.3:+53633969 | None:intergenic |
| TCTCATTGTAGAAGCAAGAT+CGG | 0.504225 | 2.3:+53633217 | None:intergenic |
| TGGGATGTGATCAAATTCTC+AGG | 0.506817 | 2.3:-53630800 | MS.gene58663:CDS |
| ATCAAATATTGGATGACCAA+GGG | 0.508658 | 2.3:+53633736 | None:intergenic |
| GGAAAAGGTTATCCTAGCAT+TGG | 0.517530 | 2.3:-53629698 | MS.gene58663:CDS |
| CTCCAATCCCAAGTGAAGAA+AGG | 0.524529 | 2.3:-53630511 | MS.gene58663:CDS |
| GTTAATCTTGTTCAGCATAG+TGG | 0.526606 | 2.3:-53633073 | MS.gene58663:intron |
| TGCTGGACAACGGATAAGAA+AGG | 0.527485 | 2.3:-53632660 | MS.gene58663:CDS |
| CTCATTGTAGAAGCAAGATC+GGG | 0.528009 | 2.3:+53633218 | None:intergenic |
| CTTGATAGATCTCCAATGCT+AGG | 0.544253 | 2.3:+53629686 | None:intergenic |
| TCGAACCTCTTCGCCGACCA+AGG | 0.545300 | 2.3:-53633935 | MS.gene58663:CDS |
| AATATGCTGATTCCTTATGC+TGG | 0.547916 | 2.3:-53632929 | MS.gene58663:intron |
| CAAAGGTTCATGTGGGCAGT+AGG | 0.553144 | 2.3:-53633013 | MS.gene58663:CDS |
| GCAGAAGTTCTATCGAGCAC+TGG | 0.557263 | 2.3:-53630605 | MS.gene58663:intron |
| CAGCACGAACATTGCCAACA+TGG | 0.557449 | 2.3:-53630550 | MS.gene58663:CDS |
| GCTGTTTCATCATCTTTAGG+AGG | 0.562065 | 2.3:+53634714 | None:intergenic |
| GCTGGACAACGGATAAGAAA+GGG | 0.563259 | 2.3:-53632659 | MS.gene58663:CDS |
| AGATGATGAAACAGCTTCTG+AGG | 0.564802 | 2.3:-53634706 | MS.gene58663:intron |
| CTCACCCTTGGTCGGCGAAG+AGG | 0.565363 | 2.3:+53633930 | None:intergenic |
| GACATGTTAATGCAAAGATA+CGG | 0.568057 | 2.3:-53631259 | MS.gene58663:CDS |
| CTAGTACTTTCATCTGCACT+GGG | 0.569363 | 2.3:+53633418 | None:intergenic |
| TCCTGTCCTTAAAACGCCAA+TGG | 0.569618 | 2.3:+53632702 | None:intergenic |
| TTTCTGGTCTTGCTTAGAGG+TGG | 0.573797 | 2.3:+53630433 | None:intergenic |
| GTGATCCTCAAAGGTTCATG+TGG | 0.575415 | 2.3:-53633021 | MS.gene58663:CDS |
| GAGAATTTGATCACATCCCA+AGG | 0.578387 | 2.3:+53630803 | None:intergenic |
| GTCTTGCTCGTGATCCTCAA+AGG | 0.578672 | 2.3:-53633030 | MS.gene58663:CDS |
| TATCAAATATTGGATGACCA+AGG | 0.581735 | 2.3:+53633735 | None:intergenic |
| AGTCAAATGAAAACAAGAGA+AGG | 0.583863 | 2.3:+53633479 | None:intergenic |
| AATCCCAAGTGAAGAAAGGA+AGG | 0.592614 | 2.3:-53630507 | MS.gene58663:CDS |
| CCTGAAGAGTATTATCGTAA+CGG | 0.595528 | 2.3:-53630722 | MS.gene58663:intron |
| ATGGTTAGCATCAATTCAAG+AGG | 0.596700 | 2.3:+53633800 | None:intergenic |
| CGAACCTCTTCGCCGACCAA+GGG | 0.606118 | 2.3:-53633934 | MS.gene58663:intron |
| GACCAAGGGGAATTATATCA+GGG | 0.608421 | 2.3:+53633750 | None:intergenic |
| TGAGGCTACTCACCCTTGGT+CGG | 0.610693 | 2.3:+53633922 | None:intergenic |
| TCAAATATTGGATGACCAAG+GGG | 0.620822 | 2.3:+53633737 | None:intergenic |
| ACATTGCCAACATGGTCAGA+TGG | 0.621351 | 2.3:-53630542 | MS.gene58663:CDS |
| AGAATTCTGGGAGAAGAACT+GGG | 0.626608 | 2.3:-53633174 | MS.gene58663:intron |
| TTCTTATAAATGCTGGACAA+CGG | 0.630290 | 2.3:-53632670 | MS.gene58663:CDS |
| ACATCTCCATCTGACCATGT+TGG | 0.639498 | 2.3:+53630536 | None:intergenic |
| TACGATAATACTCTTCAGGA+AGG | 0.641879 | 2.3:+53630726 | None:intergenic |
| ACGGATAAGAAAGGGAGATG+AGG | 0.666436 | 2.3:-53632651 | MS.gene58663:intron |
| TAGCTTACTTCTAGCTACAG+AGG | 0.670222 | 2.3:-53633398 | MS.gene58663:intron |
| TGATCCTCAAAGGTTCATGT+GGG | 0.670337 | 2.3:-53633020 | MS.gene58663:CDS |
| CCATAAGCAAGAAATTACCA+TGG | 0.675291 | 2.3:-53633781 | MS.gene58663:CDS |
| TATCAACTCAACAAATCCAG+AGG | 0.680162 | 2.3:-53633711 | MS.gene58663:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATGATAGATTTAA+CGG | + | chr2.3:53632572-53632591 | None:intergenic | 10.0% |
| !! | ATTTCATCTTATAAAATTAT+AGG | + | chr2.3:53630056-53630075 | None:intergenic | 10.0% |
| !! | CATTATACAAATAATTAATG+AGG | + | chr2.3:53630586-53630605 | None:intergenic | 15.0% |
| !! | TATTTAAAAGTTATAAGACA+TGG | - | chr2.3:53633385-53633404 | MS.gene58663:intron | 15.0% |
| !! | TCTTTGTATTAAAAAATTGT+GGG | - | chr2.3:53633318-53633337 | MS.gene58663:intron | 15.0% |
| !!! | AACTTAAAACTTTCTTTTTT+GGG | + | chr2.3:53634266-53634285 | None:intergenic | 15.0% |
| !!! | CATTTTGAAAGAATTTTAAA+AGG | + | chr2.3:53634180-53634199 | None:intergenic | 15.0% |
| !!! | GTGATTATAATTTAAAATGT+TGG | - | chr2.3:53630210-53630229 | MS.gene58663:intron | 15.0% |
| !!! | TTATACTAAATCTTTTTGAA+AGG | - | chr2.3:53633279-53633298 | MS.gene58663:intron | 15.0% |
| !!! | TTTTGGTTGTTTTTATTTAT+TGG | - | chr2.3:53629843-53629862 | MS.gene58663:intron | 15.0% |
| !! | AGAAAAAAAATTATTCCTAG+AGG | + | chr2.3:53634719-53634738 | None:intergenic | 20.0% |
| !! | AGAAATATTAAGCATATTTG+TGG | - | chr2.3:53632650-53632669 | MS.gene58663:intron | 20.0% |
| !! | CGTTCTAATATTTACTTTAT+GGG | - | chr2.3:53634201-53634220 | MS.gene58663:intron | 20.0% |
| !! | CTCTTTGTATTAAAAAATTG+TGG | - | chr2.3:53633317-53633336 | MS.gene58663:intron | 20.0% |
| !! | CTTAAAAAAGTAAAAAACGT+TGG | - | chr2.3:53630912-53630931 | MS.gene58663:intron | 20.0% |
| !! | GAAAAAAAATTATTCCTAGA+GGG | + | chr2.3:53634718-53634737 | None:intergenic | 20.0% |
| !! | TCACAATGAAATAATACAAA+TGG | + | chr2.3:53633135-53633154 | None:intergenic | 20.0% |
| !! | TCGTTCTAATATTTACTTTA+TGG | - | chr2.3:53634200-53634219 | MS.gene58663:intron | 20.0% |
| !! | TTTCTTAATCAGTTATTACA+CGG | + | chr2.3:53632846-53632865 | None:intergenic | 20.0% |
| !!! | AAAAGAATGTTACCTTTTTT+GGG | - | chr2.3:53629915-53629934 | MS.gene58663:CDS | 20.0% |
| !!! | ACTAAATTTTAAAAACTCAG+TGG | + | chr2.3:53633637-53633656 | None:intergenic | 20.0% |
| !!! | ATGATCAATGTTTTAAAAAC+TGG | - | chr2.3:53632138-53632157 | MS.gene58663:intron | 20.0% |
| !!! | ATTATGAGATATAGTTTTAG+AGG | - | chr2.3:53632428-53632447 | MS.gene58663:intron | 20.0% |
| !!! | CAACTTAAAACTTTCTTTTT+TGG | + | chr2.3:53634267-53634286 | None:intergenic | 20.0% |
| !!! | CTGTTGTTATTTTATCAAAA+AGG | + | chr2.3:53631696-53631715 | None:intergenic | 20.0% |
| !!! | GAATTTTGGACAATATAATT+AGG | + | chr2.3:53633169-53633188 | None:intergenic | 20.0% |
| !!! | GAGTTGATAATATCAAATAT+TGG | + | chr2.3:53630765-53630784 | None:intergenic | 20.0% |
| !!! | TTGTTTATACTACTGTTTTT+TGG | - | chr2.3:53629826-53629845 | MS.gene58663:intron | 20.0% |
| !!! | TTTTCAAATCGGAATTATTT+AGG | - | chr2.3:53633839-53633858 | MS.gene58663:intron | 20.0% |
| !!! | TTTTGATAAAATAACAACAG+AGG | - | chr2.3:53631696-53631715 | MS.gene58663:intron | 20.0% |
| !!! | TTTTGGATGAATTCTTTAAA+GGG | - | chr2.3:53630324-53630343 | MS.gene58663:intron | 20.0% |
| !!! | TTTTTGGATGAATTCTTTAA+AGG | - | chr2.3:53630323-53630342 | MS.gene58663:intron | 20.0% |
| ! | AAAGCTGTTAACGTTATAAA+AGG | - | chr2.3:53632790-53632809 | MS.gene58663:intron | 25.0% |
| ! | AACAGTAGTATAAACAAACA+AGG | + | chr2.3:53629823-53629842 | None:intergenic | 25.0% |
| ! | AATGGTAATTTAAACATGCT+AGG | + | chr2.3:53633117-53633136 | None:intergenic | 25.0% |
| ! | AATTATGATAGATTTAACGG+AGG | + | chr2.3:53632569-53632588 | None:intergenic | 25.0% |
| ! | AATTTATTTGTTCCTCTAGT+TGG | - | chr2.3:53630418-53630437 | MS.gene58663:intron | 25.0% |
| ! | ATATTAAGCATATTTGTGGA+CGG | - | chr2.3:53632654-53632673 | MS.gene58663:CDS | 25.0% |
| ! | CTAGATCATTAAAAACTGTT+AGG | + | chr2.3:53632980-53632999 | None:intergenic | 25.0% |
| ! | CTTCTCAAAAGTTTAAAAAG+TGG | + | chr2.3:53634296-53634315 | None:intergenic | 25.0% |
| ! | GAAGACAAAAAATTTCAACA+AGG | + | chr2.3:53631354-53631373 | None:intergenic | 25.0% |
| ! | GAAGGTAGTAAAAATATAGA+CGG | - | chr2.3:53631988-53632007 | MS.gene58663:intron | 25.0% |
| ! | GTTAGCTAAATATCAATCAA+TGG | + | chr2.3:53631146-53631165 | None:intergenic | 25.0% |
| ! | TAAAGAATTCATCCAAAAAC+TGG | + | chr2.3:53630322-53630341 | None:intergenic | 25.0% |
| ! | TACGAAAATGATAGAATAGT+TGG | + | chr2.3:53631612-53631631 | None:intergenic | 25.0% |
| ! | TATAAAAAGAAAGTTACCAC+TGG | + | chr2.3:53633264-53633283 | None:intergenic | 25.0% |
| ! | TATTATTTCATTGTGAGACA+TGG | - | chr2.3:53633139-53633158 | MS.gene58663:intron | 25.0% |
| ! | TGAGATATTTAGTTGTGATA+TGG | - | chr2.3:53630366-53630385 | MS.gene58663:intron | 25.0% |
| ! | TGTAATTGTGTAAATCTTTG+TGG | - | chr2.3:53630956-53630975 | MS.gene58663:intron | 25.0% |
| ! | TGTTAGGTAGAAAAAAAAAC+TGG | + | chr2.3:53632964-53632983 | None:intergenic | 25.0% |
| ! | TTAGAAGCTTGAAAACTAAT+TGG | - | chr2.3:53633032-53633051 | MS.gene58663:CDS | 25.0% |
| ! | TTCTTAATCAGTTATTACAC+GGG | + | chr2.3:53632845-53632864 | None:intergenic | 25.0% |
| !! | ACAAAAAGTCTATCTAGTTT+GGG | + | chr2.3:53631964-53631983 | None:intergenic | 25.0% |
| !! | CTCACAAAACTTGATTTTTA+AGG | + | chr2.3:53632900-53632919 | None:intergenic | 25.0% |
| !! | TAGTTTTTGTTCTCAACAAA+TGG | - | chr2.3:53631390-53631409 | MS.gene58663:intron | 25.0% |
| !! | TTTTGAACTAATGACTTTAG+AGG | + | chr2.3:53630815-53630834 | None:intergenic | 25.0% |
| !!! | CAAAAGAATGTTACCTTTTT+TGG | - | chr2.3:53629914-53629933 | MS.gene58663:CDS | 25.0% |
| !!! | TCATGTTGATTTGTATATCT+AGG | - | chr2.3:53631223-53631242 | MS.gene58663:intron | 25.0% |
| AAACAAACAAGGTGCAAAAT+GGG | + | chr2.3:53629812-53629831 | None:intergenic | 30.0% | |
| AAACATGACACTAATTGTCA+TGG | + | chr2.3:53634155-53634174 | None:intergenic | 30.0% | |
| AATCCTATCTTGTAGAAATC+AGG | + | chr2.3:53630455-53630474 | None:intergenic | 30.0% | |
| AATGTGAATGTGATGTATAC+AGG | - | chr2.3:53634740-53634759 | MS.gene58663:intron | 30.0% | |
| ACAAAAACCAAATGAGTAAG+TGG | + | chr2.3:53629690-53629709 | None:intergenic | 30.0% | |
| ACACTTGATGTACTGAATAA+AGG | - | chr2.3:53632468-53632487 | MS.gene58663:intron | 30.0% | |
| ACTTAAATATGCAGAATCCT+TGG | - | chr2.3:53633667-53633686 | MS.gene58663:intron | 30.0% | |
| ACTTATACATGTTTGCCATT+TGG | - | chr2.3:53633610-53633629 | MS.gene58663:intron | 30.0% | |
| AGTAACGTCTAATATAAGGA+AGG | + | chr2.3:53631903-53631922 | None:intergenic | 30.0% | |
| AGTCAAATGAAAACAAGAGA+AGG | + | chr2.3:53631011-53631030 | None:intergenic | 30.0% | |
| AGTCATAATCTAAGTGACAT+AGG | - | chr2.3:53632998-53633017 | MS.gene58663:CDS | 30.0% | |
| ATCAAATATTGGATGACCAA+GGG | + | chr2.3:53630754-53630773 | None:intergenic | 30.0% | |
| ATTGCACAGAAAATTGCTAA+TGG | - | chr2.3:53634768-53634787 | MS.gene58663:intron | 30.0% | |
| ATTGGTTGAAAGTAACAACT+AGG | - | chr2.3:53629861-53629880 | MS.gene58663:intron | 30.0% | |
| CAAAAACCAAATGAGTAAGT+GGG | + | chr2.3:53629689-53629708 | None:intergenic | 30.0% | |
| CAAATATAGTAATCTCGCAT+TGG | + | chr2.3:53634334-53634353 | None:intergenic | 30.0% | |
| CACAAAAAGTCTATCTAGTT+TGG | + | chr2.3:53631965-53631984 | None:intergenic | 30.0% | |
| CACAAGTAACGTCTAATATA+AGG | + | chr2.3:53631907-53631926 | None:intergenic | 30.0% | |
| CAGAAAATTGCTAATGGAAA+AGG | - | chr2.3:53634774-53634793 | MS.gene58663:intron | 30.0% | |
| CCACATTCTTACCTAAATAT+AGG | - | chr2.3:53633421-53633440 | MS.gene58663:CDS | 30.0% | |
| CCTATATTTAGGTAAGAATG+TGG | + | chr2.3:53633424-53633443 | None:intergenic | 30.0% | |
| CTTAAATATGCAGAATCCTT+GGG | - | chr2.3:53633668-53633687 | MS.gene58663:intron | 30.0% | |
| GACATGTTAATGCAAAGATA+CGG | - | chr2.3:53633228-53633247 | MS.gene58663:CDS | 30.0% | |
| GCAATATCTTCATTCCTATA+AGG | - | chr2.3:53630296-53630315 | MS.gene58663:intron | 30.0% | |
| TAAACAAACAAGGTGCAAAA+TGG | + | chr2.3:53629813-53629832 | None:intergenic | 30.0% | |
| TAGCATTTCCCTTACTTTAT+TGG | - | chr2.3:53634385-53634404 | MS.gene58663:intron | 30.0% | |
| TATCAAATATTGGATGACCA+AGG | + | chr2.3:53630755-53630774 | None:intergenic | 30.0% | |
| TATTAAGCATATTTGTGGAC+GGG | - | chr2.3:53632655-53632674 | MS.gene58663:CDS | 30.0% | |
| TGATCATTACCACATATACA+CGG | + | chr2.3:53632125-53632144 | None:intergenic | 30.0% | |
| TTCTTATAAATGCTGGACAA+CGG | - | chr2.3:53631817-53631836 | MS.gene58663:intron | 30.0% | |
| ! | ACTGTCATCTGTTAGAATTT+TGG | + | chr2.3:53633183-53633202 | None:intergenic | 30.0% |
| ! | GCACATTTCTCTTTTCAAAT+CGG | - | chr2.3:53633828-53633847 | MS.gene58663:intron | 30.0% |
| ! | TTAAAAAATTGTGGGCTGAT+AGG | - | chr2.3:53633326-53633345 | MS.gene58663:intron | 30.0% |
| ! | TTTTCCCTAATGATGAACTT+GGG | - | chr2.3:53630646-53630665 | MS.gene58663:intron | 30.0% |
| !! | AATCAAGTTTTGTGAGAAGA+AGG | - | chr2.3:53632904-53632923 | MS.gene58663:intron | 30.0% |
| !! | AGCTTATGGAGTTGATTTTA+AGG | - | chr2.3:53630490-53630509 | MS.gene58663:CDS | 30.0% |
| !! | AGTCATTTTGCGAAAAACAA+GGG | + | chr2.3:53634446-53634465 | None:intergenic | 30.0% |
| !! | ATGGAGTTGATTTTAAGGAA+GGG | - | chr2.3:53630495-53630514 | MS.gene58663:CDS | 30.0% |
| !! | TAAAGTGGATTCTAAAACTG+TGG | + | chr2.3:53631196-53631215 | None:intergenic | 30.0% |
| !! | TATGGAGTTGATTTTAAGGA+AGG | - | chr2.3:53630494-53630513 | MS.gene58663:CDS | 30.0% |
| !! | TGTTGATTTGTATATCTAGG+AGG | - | chr2.3:53631226-53631245 | MS.gene58663:intron | 30.0% |
| !!! | AGCCAAATTGTTTTTTCCAT+TGG | - | chr2.3:53631769-53631788 | MS.gene58663:intron | 30.0% |
| !!! | TTTTTTCCATTGGCGTTTTA+AGG | - | chr2.3:53631779-53631798 | MS.gene58663:intron | 30.0% |
| AAGAAGCAACTGCACATATA+TGG | + | chr2.3:53633534-53633553 | None:intergenic | 35.0% | |
| ACATCAGATGTAGCTACATT+TGG | - | chr2.3:53631164-53631183 | MS.gene58663:intron | 35.0% | |
| ACATCTGACCAAATAAATGC+AGG | - | chr2.3:53632389-53632408 | MS.gene58663:intron | 35.0% | |
| ACTTCTCTGATATCTAACCA+TGG | - | chr2.3:53632818-53632837 | MS.gene58663:intron | 35.0% | |
| AGCATTAAGGAAGTCTGTAT+TGG | - | chr2.3:53633464-53633483 | MS.gene58663:CDS | 35.0% | |
| AGTATATTTGTGTGCAGATG+TGG | + | chr2.3:53632346-53632365 | None:intergenic | 35.0% | |
| ATAGTTGGTTAGACCATTTG+AGG | + | chr2.3:53631597-53631616 | None:intergenic | 35.0% | |
| ATATCAGGGAAAAACATCCA+TGG | + | chr2.3:53630726-53630745 | None:intergenic | 35.0% | |
| ATGGTTAGCATCAATTCAAG+AGG | + | chr2.3:53630690-53630709 | None:intergenic | 35.0% | |
| ATTCTGAGTAGTTGTCCATA+TGG | - | chr2.3:53630620-53630639 | MS.gene58663:intron | 35.0% | |
| ATTTCACATCCGTGTATATG+TGG | - | chr2.3:53632113-53632132 | MS.gene58663:intron | 35.0% | |
| CACGAGAGTGAGAATAATTA+TGG | - | chr2.3:53632868-53632887 | MS.gene58663:intron | 35.0% | |
| CATTTATTTGGTCAGATGTG+GGG | + | chr2.3:53632388-53632407 | None:intergenic | 35.0% | |
| CATTTCCCTTACTTTATTGG+TGG | - | chr2.3:53634388-53634407 | MS.gene58663:intron | 35.0% | |
| CCATAAGCAAGAAATTACCA+TGG | - | chr2.3:53630706-53630725 | MS.gene58663:intron | 35.0% | |
| CCATGGTAATTTCTTGCTTA+TGG | + | chr2.3:53630709-53630728 | None:intergenic | 35.0% | |
| CGACTAAACTATGAGCATTA+AGG | - | chr2.3:53633451-53633470 | MS.gene58663:CDS | 35.0% | |
| CGCCAATGGAAAAAACAATT+TGG | + | chr2.3:53631774-53631793 | None:intergenic | 35.0% | |
| CTAGTCCACCAATAAAGTAA+GGG | + | chr2.3:53634396-53634415 | None:intergenic | 35.0% | |
| CTGAATTACCTAACAGTTTC+TGG | + | chr2.3:53634073-53634092 | None:intergenic | 35.0% | |
| CTGACAAGAAAGAATCCAAA+TGG | + | chr2.3:53633725-53633744 | None:intergenic | 35.0% | |
| CTTGAGGTTCTTATAAATGC+TGG | - | chr2.3:53631810-53631829 | MS.gene58663:intron | 35.0% | |
| GAAAGTAACAACTAGGACTA+AGG | - | chr2.3:53629868-53629887 | MS.gene58663:intron | 35.0% | |
| GATCCTGATTTCTACAAGAT+AGG | - | chr2.3:53630449-53630468 | MS.gene58663:CDS | 35.0% | |
| GCATATACACCAAAACCATT+TGG | + | chr2.3:53630521-53630540 | None:intergenic | 35.0% | |
| GCATTTATTTGGTCAGATGT+GGG | + | chr2.3:53632389-53632408 | None:intergenic | 35.0% | |
| GTATATTTGTGTGCAGATGT+GGG | + | chr2.3:53632345-53632364 | None:intergenic | 35.0% | |
| GTTAATCTTGTTCAGCATAG+TGG | - | chr2.3:53631414-53631433 | MS.gene58663:intron | 35.0% | |
| TAAAAACTCAGTGGACCAAA+TGG | + | chr2.3:53633628-53633647 | None:intergenic | 35.0% | |
| TACGATAATACTCTTCAGGA+AGG | + | chr2.3:53633764-53633783 | None:intergenic | 35.0% | |
| TAGGCTAGTATAAAGGAACT+AGG | - | chr2.3:53632037-53632056 | MS.gene58663:intron | 35.0% | |
| TATATTTGTGTGCAGATGTG+GGG | + | chr2.3:53632344-53632363 | None:intergenic | 35.0% | |
| TATCAACTCAACAAATCCAG+AGG | - | chr2.3:53630776-53630795 | MS.gene58663:CDS | 35.0% | |
| TCAAATATTGGATGACCAAG+GGG | + | chr2.3:53630753-53630772 | None:intergenic | 35.0% | |
| TCTAGTCCACCAATAAAGTA+AGG | + | chr2.3:53634397-53634416 | None:intergenic | 35.0% | |
| TCTCATTGTAGAAGCAAGAT+CGG | + | chr2.3:53631273-53631292 | None:intergenic | 35.0% | |
| TGCATTTATTTGGTCAGATG+TGG | + | chr2.3:53632390-53632409 | None:intergenic | 35.0% | |
| TGGTCATTAAACGAAAGCTA+AGG | + | chr2.3:53634552-53634571 | None:intergenic | 35.0% | |
| TGTGCATATGTGACATGATA+CGG | - | chr2.3:53630013-53630032 | MS.gene58663:intron | 35.0% | |
| TTCAACGTAGGCTAGTATAA+AGG | - | chr2.3:53632030-53632049 | MS.gene58663:intron | 35.0% | |
| TTGTAGAAATCAGGATCTAC+AGG | + | chr2.3:53630446-53630465 | None:intergenic | 35.0% | |
| TTGTCAGTCTTCAACATATC+TGG | - | chr2.3:53633738-53633757 | MS.gene58663:CDS | 35.0% | |
| TTGTTGCCTAAATCCAACAT+GGG | - | chr2.3:53632749-53632768 | MS.gene58663:intron | 35.0% | |
| ! | AACAATTTGGCTCAAACGAA+TGG | + | chr2.3:53631761-53631780 | None:intergenic | 35.0% |
| ! | ACTAGATAGACTTTTTGTGC+AGG | - | chr2.3:53631966-53631985 | MS.gene58663:intron | 35.0% |
| ! | ACTGGAGATACTTTTGTTGA+TGG | - | chr2.3:53633900-53633919 | MS.gene58663:intron | 35.0% |
| ! | ACTTTATGGGTTATGCTAAC+CGG | - | chr2.3:53634214-53634233 | MS.gene58663:intron | 35.0% |
| ! | AGAGTATTATCGTAACGGTA+TGG | - | chr2.3:53633770-53633789 | MS.gene58663:CDS | 35.0% |
| ! | ATATGAGACCTTTTTGTTGG+TGG | - | chr2.3:53629941-53629960 | MS.gene58663:intron | 35.0% |
| ! | ATTCCTATAAGGCCAGTTTT+TGG | - | chr2.3:53630307-53630326 | MS.gene58663:intron | 35.0% |
| ! | GAAGCTGTTTCATCATCTTT+AGG | + | chr2.3:53629779-53629798 | None:intergenic | 35.0% |
| ! | GACAACTTTTGGCAGTATTA+CGG | - | chr2.3:53631036-53631055 | MS.gene58663:intron | 35.0% |
| ! | GTATATCTAGGAGGAACTTT+TGG | - | chr2.3:53631235-53631254 | MS.gene58663:intron | 35.0% |
| ! | GTTTCAACAGAAGCTTTAAC+AGG | + | chr2.3:53629731-53629750 | None:intergenic | 35.0% |
| ! | GTTTTCCCTAATGATGAACT+TGG | - | chr2.3:53630645-53630664 | MS.gene58663:intron | 35.0% |
| ! | TATGAGACCTTTTTGTTGGT+GGG | - | chr2.3:53629942-53629961 | MS.gene58663:intron | 35.0% |
| ! | TGCATATGAGACCTTTTTGT+TGG | - | chr2.3:53629938-53629957 | MS.gene58663:intron | 35.0% |
| ! | TTGACTGCAAAGACAACTTT+TGG | - | chr2.3:53631025-53631044 | MS.gene58663:intron | 35.0% |
| !! | AATATGCTGATTCCTTATGC+TGG | - | chr2.3:53631558-53631577 | MS.gene58663:intron | 35.0% |
| !! | CAAAAGTGCCTGCATTTATT+TGG | + | chr2.3:53632400-53632419 | None:intergenic | 35.0% |
| !! | CAGTCATTTTGCGAAAAACA+AGG | + | chr2.3:53634447-53634466 | None:intergenic | 35.0% |
| !! | CCTGAAGAGTATTATCGTAA+CGG | - | chr2.3:53633765-53633784 | MS.gene58663:CDS | 35.0% |
| !! | TAAGCTTTGTTCACCTCAAA+TGG | - | chr2.3:53631581-53631600 | MS.gene58663:intron | 35.0% |
| AACAACGAGCGTTAGAATTC+TGG | - | chr2.3:53631300-53631319 | MS.gene58663:intron | 40.0% | |
| AAGCAAGACCAGAAACTGTT+AGG | - | chr2.3:53634062-53634081 | MS.gene58663:intron | 40.0% | |
| AATCCCAAGTGAAGAAAGGA+AGG | - | chr2.3:53633980-53633999 | MS.gene58663:CDS | 40.0% | |
| AATCTTTGTGGCAGACAGAT+TGG | - | chr2.3:53630968-53630987 | MS.gene58663:intron | 40.0% | |
| ACAACGAGCGTTAGAATTCT+GGG | - | chr2.3:53631301-53631320 | MS.gene58663:intron | 40.0% | |
| ACAGGACACAATATCCAACT+GGG | - | chr2.3:53633351-53633370 | MS.gene58663:intron | 40.0% | |
| AGATGATGAAACAGCTTCTG+AGG | - | chr2.3:53629781-53629800 | MS.gene58663:intron | 40.0% | |
| AGGATGATTGCAATTACCTC+TGG | + | chr2.3:53630795-53630814 | None:intergenic | 40.0% | |
| ATAGCCATAGTGAATACGAG+AGG | + | chr2.3:53632065-53632084 | None:intergenic | 40.0% | |
| ATATTTCAGACATCCCCAGT+TGG | + | chr2.3:53633368-53633387 | None:intergenic | 40.0% | |
| ATCTTTGTGGCAGACAGATT+GGG | - | chr2.3:53630969-53630988 | MS.gene58663:intron | 40.0% | |
| ATGAATCGCCTGAAGTAAAC+GGG | - | chr2.3:53634420-53634439 | MS.gene58663:intron | 40.0% | |
| CATGAATCGCCTGAAGTAAA+CGG | - | chr2.3:53634419-53634438 | MS.gene58663:intron | 40.0% | |
| CATTAGCATCTTAACCCTCT+AGG | - | chr2.3:53634701-53634720 | MS.gene58663:intron | 40.0% | |
| CATTAGGGAAAACAGCCATA+TGG | + | chr2.3:53630638-53630657 | None:intergenic | 40.0% | |
| CCGTTACGATAATACTCTTC+AGG | + | chr2.3:53633768-53633787 | None:intergenic | 40.0% | |
| CTAGTACTTTCATCTGCACT+GGG | + | chr2.3:53631072-53631091 | None:intergenic | 40.0% | |
| CTCATTGTAGAAGCAAGATC+GGG | + | chr2.3:53631272-53631291 | None:intergenic | 40.0% | |
| CTTGATAGATCTCCAATGCT+AGG | + | chr2.3:53634804-53634823 | None:intergenic | 40.0% | |
| CTTTATGCCCACCAACAAAA+AGG | + | chr2.3:53629952-53629971 | None:intergenic | 40.0% | |
| GAACAAAGCTTACCAGCATA+AGG | + | chr2.3:53631573-53631592 | None:intergenic | 40.0% | |
| GACCAAGGGGAATTATATCA+GGG | + | chr2.3:53630740-53630759 | None:intergenic | 40.0% | |
| GAGAATTTGATCACATCCCA+AGG | + | chr2.3:53633687-53633706 | None:intergenic | 40.0% | |
| GCAACACACAAGAAACAGAA+GGG | - | chr2.3:53632712-53632731 | MS.gene58663:CDS | 40.0% | |
| GGAAAAGGTTATCCTAGCAT+TGG | - | chr2.3:53634789-53634808 | MS.gene58663:intron | 40.0% | |
| GTAGCGAGACTTTAAATTGC+AGG | + | chr2.3:53630135-53630154 | None:intergenic | 40.0% | |
| GTCGATGAGGACCTATATTT+AGG | + | chr2.3:53633435-53633454 | None:intergenic | 40.0% | |
| GTCTCATATGCACCCAAAAA+AGG | + | chr2.3:53629930-53629949 | None:intergenic | 40.0% | |
| GTTGTTGCCTAAATCCAACA+TGG | - | chr2.3:53632748-53632767 | MS.gene58663:intron | 40.0% | |
| TACAGGACACAATATCCAAC+TGG | - | chr2.3:53633350-53633369 | MS.gene58663:intron | 40.0% | |
| TGAACTTGGGCAGGTTATAA+TGG | - | chr2.3:53630659-53630678 | MS.gene58663:intron | 40.0% | |
| TGACCAAGGGGAATTATATC+AGG | + | chr2.3:53630741-53630760 | None:intergenic | 40.0% | |
| TGATCCTCAAAGGTTCATGT+GGG | - | chr2.3:53631467-53631486 | MS.gene58663:intron | 40.0% | |
| TGCAACACACAAGAAACAGA+AGG | - | chr2.3:53632711-53632730 | MS.gene58663:CDS | 40.0% | |
| TGCTCATAGTTTAGTCGATG+AGG | + | chr2.3:53633448-53633467 | None:intergenic | 40.0% | |
| TGGGATGTGATCAAATTCTC+AGG | - | chr2.3:53633687-53633706 | MS.gene58663:intron | 40.0% | |
| TGTTGGATTTAGGCAACAAC+AGG | + | chr2.3:53632748-53632767 | None:intergenic | 40.0% | |
| TTCAAGAGTTCTCGTAGCTT+CGG | + | chr2.3:53634587-53634606 | None:intergenic | 40.0% | |
| TTCCCTGATATAATTCCCCT+TGG | - | chr2.3:53630735-53630754 | MS.gene58663:CDS | 40.0% | |
| TTCCTTAACGATTGCCCTAA+GGG | + | chr2.3:53634242-53634261 | None:intergenic | 40.0% | |
| TTCCTTTCTTCACTTGGGAT+TGG | + | chr2.3:53633981-53634000 | None:intergenic | 40.0% | |
| TTCGTACTCATGCATAGTAG+CGG | - | chr2.3:53631626-53631645 | MS.gene58663:intron | 40.0% | |
| TTTCCTTAACGATTGCCCTA+AGG | + | chr2.3:53634243-53634262 | None:intergenic | 40.0% | |
| ! | AGAATTCTGGGAGAAGAACT+GGG | - | chr2.3:53631313-53631332 | MS.gene58663:intron | 40.0% |
| ! | ATCTTTAGGAGGCTGAAACA+AGG | + | chr2.3:53629765-53629784 | None:intergenic | 40.0% |
| ! | CTTTAGGAAGATTGCATGCT+TGG | + | chr2.3:53632285-53632304 | None:intergenic | 40.0% |
| ! | GATAGACTTTTTGTGCAGGA+AGG | - | chr2.3:53631970-53631989 | MS.gene58663:intron | 40.0% |
| ! | GCAAGACGTTTTACTTTGAG+CGG | + | chr2.3:53631444-53631463 | None:intergenic | 40.0% |
| ! | GCATGTCAGATTTTCAACGT+AGG | - | chr2.3:53632018-53632037 | MS.gene58663:intron | 40.0% |
| ! | GCTGTTTCATCATCTTTAGG+AGG | + | chr2.3:53629776-53629795 | None:intergenic | 40.0% |
| ! | TAGAATTCTGGGAGAAGAAC+TGG | - | chr2.3:53631312-53631331 | MS.gene58663:intron | 40.0% |
| ! | TAGCTTACTTCTAGCTACAG+AGG | - | chr2.3:53631089-53631108 | MS.gene58663:intron | 40.0% |
| ! | TAGTGGTCTTACTCTTAAGC+CGG | - | chr2.3:53629981-53630000 | MS.gene58663:intron | 40.0% |
| ! | TCTTTAGGAGGCTGAAACAA+GGG | + | chr2.3:53629764-53629783 | None:intergenic | 40.0% |
| !! | CAAGTTTTGTGAGAAGAAGG+TGG | - | chr2.3:53632907-53632926 | MS.gene58663:intron | 40.0% |
| !! | CATCCAAAAACTGGCCTTAT+AGG | + | chr2.3:53630313-53630332 | None:intergenic | 40.0% |
| !! | GATTTTAAGGAAGGGCCAAA+TGG | - | chr2.3:53630503-53630522 | MS.gene58663:CDS | 40.0% |
| !! | GCATAAAGCGAGTGTTTTAG+TGG | - | chr2.3:53629964-53629983 | MS.gene58663:intron | 40.0% |
| !! | TTTTAAGGACAGGATGCTTG+AGG | - | chr2.3:53631794-53631813 | MS.gene58663:intron | 40.0% |
| !!! | GCTCGGTGTTTCTTTTCTTT+AGG | + | chr2.3:53632301-53632320 | None:intergenic | 40.0% |
| AAATGCTAACCAATGCCCTC+AGG | + | chr2.3:53634373-53634392 | None:intergenic | 45.0% | |
| AATGCTAACCAATGCCCTCA+GGG | + | chr2.3:53634372-53634391 | None:intergenic | 45.0% | |
| ACATTGAAGCTAATCGTCGC+TGG | - | chr2.3:53632526-53632545 | MS.gene58663:intron | 45.0% | |
| ACATTGCCAACATGGTCAGA+TGG | - | chr2.3:53633945-53633964 | MS.gene58663:CDS | 45.0% | |
| ACCTGCCCAAGTTCATCATT+AGG | + | chr2.3:53630654-53630673 | None:intergenic | 45.0% | |
| ACGGATAAGAAAGGGAGATG+AGG | - | chr2.3:53631836-53631855 | MS.gene58663:intron | 45.0% | |
| ACTGTTACACTAGCCCATGT+TGG | + | chr2.3:53632765-53632784 | None:intergenic | 45.0% | |
| AGATGTGGGGTTAAAGTGGT+AGG | + | chr2.3:53632331-53632350 | None:intergenic | 45.0% | |
| AGGCAATGCACGAATCCATT+TGG | - | chr2.3:53633707-53633726 | MS.gene58663:intron | 45.0% | |
| AGGCTGAAACAAGGGAAATG+GGG | + | chr2.3:53629756-53629775 | None:intergenic | 45.0% | |
| AGTATGAGAACAGGAAGGTG+TGG | - | chr2.3:53632681-53632700 | MS.gene58663:CDS | 45.0% | |
| CAACATGAGACGTCGTAAAG+TGG | + | chr2.3:53631211-53631230 | None:intergenic | 45.0% | |
| CACTAGCCCATGTTGGATTT+AGG | + | chr2.3:53632758-53632777 | None:intergenic | 45.0% | |
| CAGCCTTCCTTTCTTCACTT+GGG | + | chr2.3:53633986-53634005 | None:intergenic | 45.0% | |
| CAGGACACAATATCCAACTG+GGG | - | chr2.3:53633352-53633371 | MS.gene58663:intron | 45.0% | |
| CCTGCCCAAGTTCATCATTA+GGG | + | chr2.3:53630653-53630672 | None:intergenic | 45.0% | |
| CTCCAATCCCAAGTGAAGAA+AGG | - | chr2.3:53633976-53633995 | MS.gene58663:CDS | 45.0% | |
| CTCCATAAGCTCGCATACTT+CGG | + | chr2.3:53630481-53630500 | None:intergenic | 45.0% | |
| CTTTCTTCACTTGGGATTGG+AGG | + | chr2.3:53633978-53633997 | None:intergenic | 45.0% | |
| GAGGCTGAAACAAGGGAAAT+GGG | + | chr2.3:53629757-53629776 | None:intergenic | 45.0% | |
| GCTAGTACTTTCATCTGCAC+TGG | + | chr2.3:53631073-53631092 | None:intergenic | 45.0% | |
| GCTGGACAACGGATAAGAAA+GGG | - | chr2.3:53631828-53631847 | MS.gene58663:intron | 45.0% | |
| GTCACATATGCACACCAACA+AGG | + | chr2.3:53630007-53630026 | None:intergenic | 45.0% | |
| GTGATCCTCAAAGGTTCATG+TGG | - | chr2.3:53631466-53631485 | MS.gene58663:intron | 45.0% | |
| TAGGAAGATTGCATGCTTGG+TGG | + | chr2.3:53632282-53632301 | None:intergenic | 45.0% | |
| TCAAGAGTTCTCGTAGCTTC+GGG | + | chr2.3:53634586-53634605 | None:intergenic | 45.0% | |
| TCAGTTATTACACGGGTCCA+TGG | + | chr2.3:53632838-53632857 | None:intergenic | 45.0% | |
| TCCTGTCCTTAAAACGCCAA+TGG | + | chr2.3:53631788-53631807 | None:intergenic | 45.0% | |
| TGCTGGACAACGGATAAGAA+AGG | - | chr2.3:53631827-53631846 | MS.gene58663:intron | 45.0% | |
| TTAATGAGGCTACTCACCCT+TGG | + | chr2.3:53630572-53630591 | None:intergenic | 45.0% | |
| TTCCTTAACCATTGCCCTGA+GGG | - | chr2.3:53634355-53634374 | MS.gene58663:intron | 45.0% | |
| TTGTGAGAAGAAGGTGGAAC+CGG | - | chr2.3:53632913-53632932 | MS.gene58663:intron | 45.0% | |
| ! | AAGGAAGGGCCAAATGGTTT+TGG | - | chr2.3:53630509-53630528 | MS.gene58663:CDS | 45.0% |
| ! | ATACGGATTTTCATCGCCAG+TGG | - | chr2.3:53633245-53633264 | MS.gene58663:CDS | 45.0% |
| ! | ATTGTGGGCTGATAGGATAC+AGG | - | chr2.3:53633333-53633352 | MS.gene58663:intron | 45.0% |
| ! | GGAGAAGTATGAGAACAGGA+AGG | - | chr2.3:53632676-53632695 | MS.gene58663:CDS | 45.0% |
| !! | CAGTTTCTGGTCTTGCTTAG+AGG | + | chr2.3:53634060-53634079 | None:intergenic | 45.0% |
| !! | TTTCTGGTCTTGCTTAGAGG+TGG | + | chr2.3:53634057-53634076 | None:intergenic | 45.0% |
| !!! | AGTTTTAGAGGATGTGCTGC+TGG | - | chr2.3:53632440-53632459 | MS.gene58663:intron | 45.0% |
| !!! | TCCATTGGCGTTTTAAGGAC+AGG | - | chr2.3:53631784-53631803 | MS.gene58663:intron | 45.0% |
| !! | ATAAACAAAATAATAAATAT+AGG | - | chr2.3:53632242-53632261 | MS.gene58663:intron | 5.0% |
| !! | TAAACAAAATAATAAATATA+GGG | - | chr2.3:53632243-53632262 | MS.gene58663:intron | 5.0% |
| AACAAGGGCCCGTTTACTTC+AGG | + | chr2.3:53634431-53634450 | None:intergenic | 50.0% | |
| AACTGGACCTGAGACCTAAC+CGG | - | chr2.3:53632155-53632174 | MS.gene58663:intron | 50.0% | |
| ACTGCCCACATGAACCTTTG+AGG | + | chr2.3:53631474-53631493 | None:intergenic | 50.0% | |
| AGCTTCGGGTGATGAATCTG+TGG | + | chr2.3:53634572-53634591 | None:intergenic | 50.0% | |
| CAAAGGTTCATGTGGGCAGT+AGG | - | chr2.3:53631474-53631493 | MS.gene58663:intron | 50.0% | |
| CACCAGATGAACTGCAGAAC+CGG | + | chr2.3:53632935-53632954 | None:intergenic | 50.0% | |
| CAGATGTGGGGTACATATGC+TGG | + | chr2.3:53632376-53632395 | None:intergenic | 50.0% | |
| CAGCACGAACATTGCCAACA+TGG | - | chr2.3:53633937-53633956 | MS.gene58663:CDS | 50.0% | |
| CATATGCACACCAACAAGGC+CGG | + | chr2.3:53630003-53630022 | None:intergenic | 50.0% | |
| CCAATGAAACCATGACCCGA+AGG | + | chr2.3:53632186-53632205 | None:intergenic | 50.0% | |
| CCCTAATGATGAACTTGGGC+AGG | - | chr2.3:53630650-53630669 | MS.gene58663:intron | 50.0% | |
| CCTTCGGGTCATGGTTTCAT+TGG | - | chr2.3:53632183-53632202 | MS.gene58663:intron | 50.0% | |
| CTTCCTTAACCATTGCCCTG+AGG | - | chr2.3:53634354-53634373 | MS.gene58663:intron | 50.0% | |
| GATCTACAGGCTCCAACTAG+AGG | + | chr2.3:53630433-53630452 | None:intergenic | 50.0% | |
| GCAGAAGTTCTATCGAGCAC+TGG | - | chr2.3:53633882-53633901 | MS.gene58663:intron | 50.0% | |
| GCAGCCTTCCTTTCTTCACT+TGG | + | chr2.3:53633987-53634006 | None:intergenic | 50.0% | |
| GGAGCCTCTCGTATTCACTA+TGG | - | chr2.3:53632058-53632077 | MS.gene58663:intron | 50.0% | |
| GGAGGCTGAAACAAGGGAAA+TGG | + | chr2.3:53629758-53629777 | None:intergenic | 50.0% | |
| GTCCGAAGTATGCGAGCTTA+TGG | - | chr2.3:53630476-53630495 | MS.gene58663:CDS | 50.0% | |
| GTCTTGCTCGTGATCCTCAA+AGG | - | chr2.3:53631457-53631476 | MS.gene58663:intron | 50.0% | |
| GTGCAGATGTGGGGTTAAAG+TGG | + | chr2.3:53632335-53632354 | None:intergenic | 50.0% | |
| TATGCTAACCGGTGCCCTTA+GGG | - | chr2.3:53634225-53634244 | MS.gene58663:intron | 50.0% | |
| TGCCCTTAGGGCAATCGTTA+AGG | - | chr2.3:53634237-53634256 | MS.gene58663:intron | 50.0% | |
| TGGCGACCCACTTACTCATT+TGG | - | chr2.3:53629680-53629699 | MS.gene58663:CDS | 50.0% | |
| TGGTTCAACCAGTGCGATCA+CGG | - | chr2.3:53632203-53632222 | MS.gene58663:intron | 50.0% | |
| TGTGGGGTACATATGCTGGA+AGG | + | chr2.3:53632372-53632391 | None:intergenic | 50.0% | |
| TTATGCTAACCGGTGCCCTT+AGG | - | chr2.3:53634224-53634243 | MS.gene58663:intron | 50.0% | |
| ! | AACCGGTTCTGCAGTTCATC+TGG | - | chr2.3:53632930-53632949 | MS.gene58663:CDS | 50.0% |
| ! | ATGAGAACAGGAAGGTGTGG+AGG | - | chr2.3:53632684-53632703 | MS.gene58663:CDS | 50.0% |
| ! | GACGGGAGAAGTATGAGAAC+AGG | - | chr2.3:53632672-53632691 | MS.gene58663:CDS | 50.0% |
| ! | TACTCTTAAGCCGGCCTTGT+TGG | - | chr2.3:53629990-53630009 | MS.gene58663:intron | 50.0% |
| AACCAATGCCCTCAGGGCAA+TGG | + | chr2.3:53634366-53634385 | None:intergenic | 55.0% | |
| AAGTGGTAGGCTTGTGCGCT+CGG | + | chr2.3:53632318-53632337 | None:intergenic | 55.0% | |
| TGAGGCTACTCACCCTTGGT+CGG | + | chr2.3:53630568-53630587 | None:intergenic | 55.0% | |
| TGCCCTCAGGGCAATGGTTA+AGG | + | chr2.3:53634360-53634379 | None:intergenic | 55.0% | |
| ! | AACCATTGCCCTGAGGGCAT+TGG | - | chr2.3:53634361-53634380 | MS.gene58663:intron | 55.0% |
| ! | AACGATTGCCCTAAGGGCAC+CGG | + | chr2.3:53634236-53634255 | None:intergenic | 55.0% |
| ! | TGCATGCTTGGTGGCAACTC+TGG | + | chr2.3:53632273-53632292 | None:intergenic | 55.0% |
| !!! | GGAGGAACTTTTGGAGCTGC+AGG | - | chr2.3:53631244-53631263 | MS.gene58663:CDS | 55.0% |
| ACCTAACCGGCGAGACCTTC+GGG | - | chr2.3:53632168-53632187 | MS.gene58663:intron | 60.0% | |
| CAGCTCAACCGTGATCGCAC+TGG | + | chr2.3:53632214-53632233 | None:intergenic | 60.0% | |
| CAGTGCGATCACGGTTGAGC+TGG | - | chr2.3:53632212-53632231 | MS.gene58663:intron | 60.0% | |
| CGAACCTCTTCGCCGACCAA+GGG | - | chr2.3:53630553-53630572 | MS.gene58663:CDS | 60.0% | |
| GACCTAACCGGCGAGACCTT+CGG | - | chr2.3:53632167-53632186 | MS.gene58663:intron | 60.0% | |
| TCGAACCTCTTCGCCGACCA+AGG | - | chr2.3:53630552-53630571 | MS.gene58663:CDS | 60.0% | |
| CCATGACCCGAAGGTCTCGC+CGG | + | chr2.3:53632177-53632196 | None:intergenic | 65.0% | |
| CTCACCCTTGGTCGGCGAAG+AGG | + | chr2.3:53630560-53630579 | None:intergenic | 65.0% | |
| ! | ACCCGAAGGTCTCGCCGGTT+AGG | + | chr2.3:53632172-53632191 | None:intergenic | 65.0% |
| ! | GGTCTCGCCGGTTAGGTCTC+AGG | + | chr2.3:53632165-53632184 | None:intergenic | 65.0% |
| CCGGCGAGACCTTCGGGTCA+TGG | - | chr2.3:53632174-53632193 | MS.gene58663:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 53629669 | 53634840 | 53629669 | ID=MS.gene58663 |
| chr2.3 | mRNA | 53629669 | 53634840 | 53629669 | ID=MS.gene58663.t1;Parent=MS.gene58663 |
| chr2.3 | exon | 53634838 | 53634840 | 53634838 | ID=MS.gene58663.t1.exon1;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53634838 | 53634840 | 53634838 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53634707 | 53634736 | 53634707 | ID=MS.gene58663.t1.exon2;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53634707 | 53634736 | 53634707 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53633935 | 53634072 | 53633935 | ID=MS.gene58663.t1.exon3;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53633935 | 53634072 | 53633935 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53633712 | 53633837 | 53633712 | ID=MS.gene58663.t1.exon4;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53633712 | 53633837 | 53633712 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53633399 | 53633527 | 53633399 | ID=MS.gene58663.t1.exon5;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53633399 | 53633527 | 53633399 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53633175 | 53633264 | 53633175 | ID=MS.gene58663.t1.exon6;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53633175 | 53633264 | 53633175 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53632930 | 53633080 | 53632930 | ID=MS.gene58663.t1.exon7;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53632930 | 53633080 | 53632930 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53632652 | 53632761 | 53632652 | ID=MS.gene58663.t1.exon8;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53632652 | 53632761 | 53632652 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53631243 | 53631314 | 53631243 | ID=MS.gene58663.t1.exon9;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53631243 | 53631314 | 53631243 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53630723 | 53630828 | 53630723 | ID=MS.gene58663.t1.exon10;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53630723 | 53630828 | 53630723 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53630426 | 53630623 | 53630426 | ID=MS.gene58663.t1.exon11;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53630426 | 53630623 | 53630426 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53629892 | 53629934 | 53629892 | ID=MS.gene58663.t1.exon12;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53629892 | 53629934 | 53629892 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| chr2.3 | exon | 53629669 | 53629747 | 53629669 | ID=MS.gene58663.t1.exon13;Parent=MS.gene58663.t1 |
| chr2.3 | CDS | 53629669 | 53629747 | 53629669 | ID=cds.MS.gene58663.t1;Parent=MS.gene58663.t1 |
| Gene Sequence |
| Protein sequence |
